Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95517.t1 | XP_013442640.1 | 67.5 | 231 | 34 | 1 | 1 | 190 | 1 | 231 | 7.10E-76 | 293.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95517.t1 | Q9FKK2 | 38.4 | 190 | 65 | 5 | 5 | 149 | 3 | 185 | 4.7e-20 | 99.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95517.t1 | A0A072TSY1 | 67.5 | 231 | 34 | 1 | 1 | 190 | 1 | 231 | 5.1e-76 | 293.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene95517.t1 | TF | MADS-M-type |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene95517 | MS.gene22094 | PPI |
MS.gene95517 | MS.gene068836 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95517.t1 | MTR_0121s0080 | 67.532 | 231 | 34 | 1 | 1 | 190 | 1 | 231 | 1.06e-104 | 300 |
MS.gene95517.t1 | MTR_7g062350 | 65.385 | 208 | 31 | 1 | 24 | 190 | 36 | 243 | 1.08e-88 | 260 |
MS.gene95517.t1 | MTR_8g043650 | 59.052 | 232 | 53 | 2 | 1 | 190 | 1 | 232 | 1.10e-87 | 258 |
MS.gene95517.t1 | MTR_2g030740 | 58.108 | 222 | 52 | 1 | 1 | 181 | 1 | 222 | 1.87e-81 | 242 |
MS.gene95517.t1 | MTR_1g105910 | 56.444 | 225 | 57 | 1 | 1 | 184 | 1 | 225 | 5.94e-81 | 240 |
MS.gene95517.t1 | MTR_1g012570 | 56.757 | 222 | 55 | 1 | 1 | 181 | 1 | 222 | 1.87e-80 | 239 |
MS.gene95517.t1 | MTR_1g105920 | 57.078 | 219 | 53 | 1 | 1 | 178 | 1 | 219 | 4.20e-80 | 238 |
MS.gene95517.t1 | MTR_3g052920 | 55.708 | 219 | 56 | 1 | 1 | 178 | 1 | 219 | 7.81e-77 | 230 |
MS.gene95517.t1 | MTR_1g108510 | 53.617 | 235 | 50 | 4 | 1 | 184 | 1 | 227 | 2.06e-74 | 223 |
MS.gene95517.t1 | MTR_3g030770 | 53.617 | 235 | 50 | 4 | 1 | 184 | 1 | 227 | 3.92e-73 | 220 |
MS.gene95517.t1 | MTR_2g093190 | 54.468 | 235 | 48 | 4 | 1 | 184 | 1 | 227 | 5.15e-73 | 220 |
MS.gene95517.t1 | MTR_1g108580 | 54.237 | 236 | 47 | 4 | 1 | 184 | 1 | 227 | 1.12e-72 | 219 |
MS.gene95517.t1 | MTR_5g053390 | 52.000 | 225 | 67 | 1 | 1 | 184 | 1 | 225 | 2.63e-72 | 218 |
MS.gene95517.t1 | MTR_1g077360 | 50.667 | 225 | 70 | 1 | 1 | 184 | 1 | 225 | 8.64e-70 | 212 |
MS.gene95517.t1 | MTR_1g075600 | 49.778 | 225 | 72 | 1 | 1 | 184 | 1 | 225 | 1.46e-69 | 211 |
MS.gene95517.t1 | MTR_2g085280 | 49.138 | 232 | 76 | 3 | 1 | 190 | 1 | 232 | 7.49e-69 | 209 |
MS.gene95517.t1 | MTR_1g105905 | 52.558 | 215 | 60 | 2 | 18 | 190 | 1 | 215 | 1.99e-68 | 208 |
MS.gene95517.t1 | MTR_2g085250 | 49.138 | 232 | 76 | 3 | 1 | 190 | 1 | 232 | 2.48e-68 | 208 |
MS.gene95517.t1 | MTR_5g055100 | 48.305 | 236 | 77 | 3 | 1 | 191 | 1 | 236 | 1.95e-67 | 206 |
MS.gene95517.t1 | MTR_5g045560 | 48.444 | 225 | 75 | 2 | 1 | 184 | 1 | 225 | 2.87e-64 | 198 |
MS.gene95517.t1 | MTR_1g106070 | 53.297 | 182 | 44 | 1 | 1 | 141 | 1 | 182 | 3.35e-59 | 183 |
MS.gene95517.t1 | MTR_3g052870 | 49.099 | 222 | 53 | 3 | 1 | 181 | 1 | 203 | 3.87e-57 | 179 |
MS.gene95517.t1 | MTR_3g030780 | 56.818 | 132 | 16 | 1 | 1 | 91 | 1 | 132 | 4.35e-39 | 130 |
MS.gene95517.t1 | MTR_1g075570 | 48.171 | 164 | 58 | 1 | 18 | 154 | 1 | 164 | 8.92e-38 | 128 |
MS.gene95517.t1 | MTR_0121s0100 | 48.485 | 132 | 27 | 1 | 1 | 91 | 1 | 132 | 4.19e-29 | 105 |
MS.gene95517.t1 | MTR_3g080940 | 36.184 | 152 | 56 | 1 | 9 | 119 | 9 | 160 | 2.36e-24 | 95.1 |
MS.gene95517.t1 | MTR_1g108500 | 66.667 | 75 | 5 | 1 | 22 | 76 | 110 | 184 | 2.03e-22 | 92.4 |
MS.gene95517.t1 | MTR_2g105290 | 36.478 | 159 | 64 | 3 | 5 | 126 | 8 | 166 | 2.61e-22 | 89.0 |
MS.gene95517.t1 | MTR_8g086290 | 36.905 | 168 | 69 | 4 | 5 | 135 | 8 | 175 | 7.92e-22 | 87.8 |
MS.gene95517.t1 | MTR_3g067875 | 72.727 | 44 | 12 | 0 | 18 | 61 | 1 | 44 | 1.12e-16 | 71.2 |
MS.gene95517.t1 | MTR_7g028448 | 39.683 | 126 | 47 | 5 | 22 | 118 | 25 | 150 | 8.76e-15 | 68.9 |
MS.gene95517.t1 | MTR_4g036915 | 39.683 | 126 | 47 | 5 | 22 | 118 | 25 | 150 | 8.76e-15 | 68.9 |
MS.gene95517.t1 | MTR_4g084740 | 45.000 | 80 | 35 | 2 | 9 | 79 | 2 | 81 | 1.39e-14 | 70.9 |
MS.gene95517.t1 | MTR_4g093970 | 59.615 | 52 | 21 | 0 | 10 | 61 | 29 | 80 | 7.72e-14 | 67.8 |
MS.gene95517.t1 | MTR_2g461710 | 56.604 | 53 | 23 | 0 | 9 | 61 | 2 | 54 | 9.64e-14 | 63.5 |
MS.gene95517.t1 | MTR_1g054265 | 57.143 | 49 | 21 | 0 | 9 | 57 | 2 | 50 | 1.08e-13 | 66.2 |
MS.gene95517.t1 | MTR_4g102530 | 40.909 | 110 | 61 | 3 | 10 | 115 | 3 | 112 | 2.13e-13 | 66.2 |
MS.gene95517.t1 | MTR_1g047550 | 53.846 | 52 | 24 | 0 | 9 | 60 | 2 | 53 | 2.47e-13 | 65.5 |
MS.gene95517.t1 | MTR_8g079502 | 53.846 | 52 | 24 | 0 | 9 | 60 | 2 | 53 | 3.17e-13 | 65.1 |
MS.gene95517.t1 | MTR_4g131030 | 57.143 | 49 | 21 | 0 | 9 | 57 | 2 | 50 | 4.12e-13 | 65.5 |
MS.gene95517.t1 | MTR_3g067870 | 63.043 | 46 | 17 | 0 | 16 | 61 | 83 | 128 | 5.96e-13 | 63.9 |
MS.gene95517.t1 | MTR_3g452380 | 54.237 | 59 | 27 | 0 | 3 | 61 | 11 | 69 | 1.11e-12 | 64.7 |
MS.gene95517.t1 | MTR_3g102570 | 60.000 | 50 | 20 | 0 | 9 | 58 | 2 | 51 | 1.13e-12 | 65.5 |
MS.gene95517.t1 | MTR_5g032150 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.31e-12 | 64.3 |
MS.gene95517.t1 | MTR_5g032520 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.40e-12 | 64.3 |
MS.gene95517.t1 | MTR_5g066960 | 47.170 | 53 | 28 | 0 | 9 | 61 | 2 | 54 | 3.08e-12 | 59.7 |
MS.gene95517.t1 | MTR_5g066180 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 3.84e-12 | 63.2 |
MS.gene95517.t1 | MTR_4g127140 | 63.158 | 57 | 21 | 0 | 5 | 61 | 8 | 64 | 4.00e-12 | 62.4 |
MS.gene95517.t1 | MTR_1g063160 | 51.020 | 49 | 24 | 0 | 9 | 57 | 2 | 50 | 4.33e-12 | 62.0 |
MS.gene95517.t1 | MTR_4g109830 | 54.545 | 55 | 23 | 1 | 7 | 61 | 2 | 54 | 4.71e-12 | 62.8 |
MS.gene95517.t1 | MTR_1g053070 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 5.58e-12 | 62.8 |
MS.gene95517.t1 | MTR_1g038300 | 51.852 | 54 | 26 | 0 | 9 | 62 | 2 | 55 | 5.64e-12 | 62.8 |
MS.gene95517.t1 | MTR_3g005530 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 5.67e-12 | 62.4 |
MS.gene95517.t1 | MTR_6g464720 | 49.254 | 67 | 28 | 2 | 7 | 73 | 2 | 62 | 6.35e-12 | 62.8 |
MS.gene95517.t1 | MTR_8g051580 | 51.923 | 52 | 25 | 0 | 9 | 60 | 2 | 53 | 6.41e-12 | 61.6 |
MS.gene95517.t1 | MTR_5g046790 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 7.29e-12 | 62.0 |
MS.gene95517.t1 | MTR_2g017865 | 54.717 | 53 | 24 | 0 | 9 | 61 | 17 | 69 | 8.16e-12 | 62.4 |
MS.gene95517.t1 | MTR_8g033270 | 54.545 | 55 | 23 | 1 | 7 | 61 | 2 | 54 | 1.03e-11 | 62.0 |
MS.gene95517.t1 | MTR_8g066260 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 1.04e-11 | 62.0 |
MS.gene95517.t1 | MTR_8g033220 | 32.836 | 134 | 60 | 4 | 10 | 113 | 3 | 136 | 1.05e-11 | 62.0 |
MS.gene95517.t1 | MTR_0003s0590 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.18e-11 | 62.0 |
MS.gene95517.t1 | MTR_8g033220 | 32.836 | 134 | 60 | 4 | 10 | 113 | 3 | 136 | 1.19e-11 | 61.6 |
MS.gene95517.t1 | MTR_8g087860 | 54.717 | 53 | 24 | 0 | 9 | 61 | 18 | 70 | 1.20e-11 | 62.0 |
MS.gene95517.t1 | MTR_7g075850 | 50.000 | 54 | 27 | 0 | 9 | 62 | 2 | 55 | 1.30e-11 | 62.0 |
MS.gene95517.t1 | MTR_1g029670 | 49.057 | 53 | 27 | 0 | 9 | 61 | 2 | 54 | 1.46e-11 | 60.8 |
MS.gene95517.t1 | MTR_5g046870 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 1.65e-11 | 58.9 |
MS.gene95517.t1 | MTR_7g016600 | 52.727 | 55 | 24 | 1 | 7 | 61 | 2 | 54 | 1.88e-11 | 61.6 |
MS.gene95517.t1 | MTR_3g084980 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 1.94e-11 | 61.2 |
MS.gene95517.t1 | MTR_7g075870 | 53.846 | 52 | 24 | 0 | 10 | 61 | 3 | 54 | 2.32e-11 | 60.8 |
MS.gene95517.t1 | MTR_7g075870 | 53.846 | 52 | 24 | 0 | 10 | 61 | 3 | 54 | 2.47e-11 | 60.5 |
MS.gene95517.t1 | MTR_3g088615 | 48.148 | 54 | 28 | 0 | 9 | 62 | 2 | 55 | 2.98e-11 | 59.7 |
MS.gene95517.t1 | MTR_3g113030 | 49.057 | 53 | 27 | 0 | 9 | 61 | 2 | 54 | 3.10e-11 | 60.5 |
MS.gene95517.t1 | MTR_4g109810 | 49.057 | 53 | 27 | 0 | 9 | 61 | 2 | 54 | 3.54e-11 | 60.5 |
MS.gene95517.t1 | MTR_6g015975 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.66e-11 | 60.5 |
MS.gene95517.t1 | MTR_8g046350 | 51.923 | 52 | 25 | 0 | 9 | 60 | 2 | 53 | 4.25e-11 | 58.9 |
MS.gene95517.t1 | MTR_8g097090 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.32e-11 | 60.5 |
MS.gene95517.t1 | MTR_5g021270 | 50.000 | 54 | 27 | 0 | 9 | 62 | 2 | 55 | 4.40e-11 | 60.1 |
MS.gene95517.t1 | MTR_5g021270 | 50.000 | 54 | 27 | 0 | 9 | 62 | 2 | 55 | 4.58e-11 | 60.1 |
MS.gene95517.t1 | MTR_1g101970 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 8.48e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95517.t1 | AT5G60440 | 39.130 | 184 | 62 | 6 | 5 | 143 | 3 | 181 | 7.05e-26 | 101 |
MS.gene95517.t1 | AT2G24840 | 34.615 | 156 | 60 | 2 | 9 | 122 | 63 | 218 | 5.05e-21 | 87.8 |
MS.gene95517.t1 | AT1G65360 | 33.511 | 188 | 79 | 7 | 5 | 151 | 3 | 185 | 1.21e-20 | 85.9 |
MS.gene95517.t1 | AT1G01530 | 66.667 | 57 | 19 | 0 | 4 | 60 | 2 | 58 | 5.63e-20 | 84.7 |
MS.gene95517.t1 | AT4G36590 | 66.667 | 57 | 19 | 0 | 5 | 61 | 3 | 59 | 1.12e-19 | 84.0 |
MS.gene95517.t1 | AT1G22130 | 54.545 | 55 | 25 | 0 | 9 | 63 | 2 | 56 | 8.35e-15 | 71.6 |
MS.gene95517.t1 | AT1G77980 | 54.545 | 55 | 25 | 0 | 9 | 63 | 2 | 56 | 9.51e-15 | 71.6 |
MS.gene95517.t1 | AT3G04100 | 47.458 | 59 | 31 | 0 | 2 | 60 | 7 | 65 | 3.74e-14 | 68.2 |
MS.gene95517.t1 | AT3G54340 | 34.127 | 126 | 72 | 3 | 9 | 131 | 2 | 119 | 2.24e-13 | 66.6 |
MS.gene95517.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95517.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95517.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95517.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95517.t1 | AT2G22540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 3.12e-13 | 66.2 |
MS.gene95517.t1 | AT2G22540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 4.53e-13 | 65.9 |
MS.gene95517.t1 | AT2G22540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 4.53e-13 | 65.9 |
MS.gene95517.t1 | AT3G66656 | 55.769 | 52 | 23 | 0 | 9 | 60 | 2 | 53 | 5.34e-13 | 64.7 |
MS.gene95517.t1 | AT4G22950 | 57.692 | 52 | 22 | 0 | 10 | 61 | 3 | 54 | 1.23e-12 | 63.5 |
MS.gene95517.t1 | AT1G72350 | 52.830 | 53 | 25 | 0 | 9 | 61 | 43 | 95 | 1.28e-12 | 64.3 |
MS.gene95517.t1 | AT5G13790 | 58.491 | 53 | 22 | 0 | 9 | 61 | 2 | 54 | 1.43e-12 | 64.7 |
MS.gene95517.t1 | AT5G13790 | 58.491 | 53 | 22 | 0 | 9 | 61 | 2 | 54 | 1.46e-12 | 64.7 |
MS.gene95517.t1 | AT4G22950 | 57.692 | 52 | 22 | 0 | 10 | 61 | 3 | 54 | 2.25e-12 | 63.5 |
MS.gene95517.t1 | AT4G22950 | 57.692 | 52 | 22 | 0 | 10 | 61 | 3 | 54 | 2.25e-12 | 63.5 |
MS.gene95517.t1 | AT4G24540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 2.60e-12 | 63.5 |
MS.gene95517.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 3 | 55 | 2.61e-12 | 62.8 |
MS.gene95517.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 3.78e-12 | 63.2 |
MS.gene95517.t1 | AT2G34440 | 53.061 | 49 | 23 | 0 | 9 | 57 | 2 | 50 | 4.10e-12 | 62.0 |
MS.gene95517.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 4.36e-12 | 63.2 |
MS.gene95517.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 3 | 55 | 4.41e-12 | 63.2 |
MS.gene95517.t1 | AT5G23260 | 50.794 | 63 | 29 | 1 | 2 | 62 | 9 | 71 | 4.42e-12 | 63.5 |
MS.gene95517.t1 | AT5G23260 | 50.794 | 63 | 29 | 1 | 2 | 62 | 9 | 71 | 4.47e-12 | 63.5 |
MS.gene95517.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 4.82e-12 | 62.0 |
MS.gene95517.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 4.82e-12 | 62.0 |
MS.gene95517.t1 | AT2G45650 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 5.03e-12 | 63.2 |
MS.gene95517.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 12 | 64 | 5.12e-12 | 62.8 |
MS.gene95517.t1 | AT1G69120 | 56.364 | 55 | 22 | 1 | 7 | 61 | 2 | 54 | 5.25e-12 | 62.8 |
MS.gene95517.t1 | AT2G42830 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 5.34e-12 | 63.2 |
MS.gene95517.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 3 | 55 | 5.39e-12 | 62.4 |
MS.gene95517.t1 | AT5G23260 | 48.438 | 64 | 33 | 0 | 9 | 72 | 2 | 65 | 5.65e-12 | 62.8 |
MS.gene95517.t1 | AT2G42830 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 5.67e-12 | 62.8 |
MS.gene95517.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 5.95e-12 | 62.8 |
MS.gene95517.t1 | AT4G18960 | 51.667 | 60 | 29 | 0 | 2 | 61 | 11 | 70 | 6.26e-12 | 62.8 |
MS.gene95517.t1 | AT5G23260 | 53.704 | 54 | 25 | 0 | 9 | 62 | 2 | 55 | 6.58e-12 | 62.8 |
MS.gene95517.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 6.93e-12 | 62.8 |
MS.gene95517.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 26 | 78 | 7.17e-12 | 62.0 |
MS.gene95517.t1 | AT4G09960 | 54.386 | 57 | 24 | 1 | 5 | 61 | 26 | 80 | 7.18e-12 | 62.8 |
MS.gene95517.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 7.34e-12 | 62.8 |
MS.gene95517.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 7.41e-12 | 61.6 |
MS.gene95517.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 18 | 75 | 7.48e-12 | 62.8 |
MS.gene95517.t1 | AT5G60910 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 7.50e-12 | 62.4 |
MS.gene95517.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 7.81e-12 | 61.2 |
MS.gene95517.t1 | AT1G26310 | 54.545 | 55 | 23 | 1 | 7 | 61 | 2 | 54 | 7.93e-12 | 62.8 |
MS.gene95517.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 8.14e-12 | 61.6 |
MS.gene95517.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 8.42e-12 | 62.0 |
MS.gene95517.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 8.42e-12 | 62.0 |
MS.gene95517.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 13 | 65 | 8.71e-12 | 62.0 |
MS.gene95517.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 9.11e-12 | 62.8 |
MS.gene95517.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 3 | 55 | 9.27e-12 | 62.0 |
MS.gene95517.t1 | AT1G69120 | 56.364 | 55 | 22 | 1 | 7 | 61 | 2 | 54 | 1.02e-11 | 62.4 |
MS.gene95517.t1 | AT3G30260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 1.19e-11 | 62.0 |
MS.gene95517.t1 | AT4G09960 | 54.386 | 57 | 24 | 1 | 5 | 61 | 95 | 149 | 1.29e-11 | 62.4 |
MS.gene95517.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.53e-11 | 60.8 |
MS.gene95517.t1 | AT3G57390 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 2.08e-11 | 61.2 |
MS.gene95517.t1 | AT5G15800 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.60e-11 | 61.2 |
MS.gene95517.t1 | AT2G03710 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.73e-11 | 60.1 |
MS.gene95517.t1 | AT1G24260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.01e-11 | 60.8 |
MS.gene95517.t1 | AT1G24260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.47e-11 | 60.8 |
MS.gene95517.t1 | AT1G24260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.64e-11 | 60.8 |
MS.gene95517.t1 | AT5G62165 | 37.647 | 85 | 43 | 1 | 10 | 84 | 3 | 87 | 3.68e-11 | 58.2 |
MS.gene95517.t1 | AT3G57390 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 3.88e-11 | 60.8 |
MS.gene95517.t1 | AT2G03710 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.95e-11 | 60.8 |
MS.gene95517.t1 | AT5G20240 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.01e-11 | 58.9 |
MS.gene95517.t1 | AT2G03710 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.14e-11 | 60.5 |
MS.gene95517.t1 | AT5G15800 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.32e-11 | 60.5 |
MS.gene95517.t1 | AT2G45660 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 4.46e-11 | 58.9 |
MS.gene95517.t1 | AT3G02310 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 5.59e-11 | 60.1 |
MS.gene95517.t1 | AT3G02310 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 6.50e-11 | 59.3 |
MS.gene95517.t1 | AT3G57230 | 47.170 | 53 | 28 | 0 | 9 | 61 | 2 | 54 | 6.77e-11 | 58.2 |
MS.gene95517.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95517.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95517.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95517.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95517.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95517.t1 | AT5G20240 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 7.98e-11 | 59.3 |
MS.gene95517.t1 | AT2G45660 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 9.21e-11 | 59.3 |
Find 44 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAATTGGCTTCAACAATA+TGG | 0.202381 | 3.4:-24336493 | MS.gene95517:CDS |
TGAATTATTCAAGAAGATTT+TGG | 0.235888 | 3.4:-24336703 | MS.gene95517:CDS |
ATCTCAGTTTGTTGAGGATT+TGG | 0.255732 | 3.4:+24336558 | None:intergenic |
ATGTTGCAACCTCATTTAAT+TGG | 0.256996 | 3.4:-24336507 | MS.gene95517:CDS |
TGTTGATAGGAGTGCAATTC+AGG | 0.259070 | 3.4:-24336652 | MS.gene95517:CDS |
TGGTGGGCTTGTCCGATTAA+TGG | 0.300675 | 3.4:-24336744 | MS.gene95517:CDS |
AGCGTCGTAGTGGGCTCTTC+AGG | 0.306350 | 3.4:-24338279 | MS.gene95517:CDS |
AGGCGTTCAAGGCTCAATTT+TGG | 0.334747 | 3.4:-24336764 | MS.gene95517:CDS |
GGTGGGCTTGTCCGATTAAT+GGG | 0.369852 | 3.4:-24336743 | MS.gene95517:CDS |
AATATGGGAGGAGGAGGATA+TGG | 0.370544 | 3.4:-24336477 | MS.gene95517:CDS |
GTCCGATTAATGGGATGAAT+AGG | 0.377904 | 3.4:-24336734 | MS.gene95517:CDS |
GTTGAGGATTTGGCTGATAA+TGG | 0.382243 | 3.4:+24336568 | None:intergenic |
TTAATTGGCTTCAACAATAT+GGG | 0.383325 | 3.4:-24336492 | MS.gene95517:CDS |
TTGTTGCTCATCATGTTGAT+AGG | 0.402553 | 3.4:-24336665 | MS.gene95517:CDS |
TCCGATTAATGGGATGAATA+GGG | 0.426477 | 3.4:-24336733 | MS.gene95517:CDS |
ATTAAATGAGGTTGCAACAT+AGG | 0.428043 | 3.4:+24336510 | None:intergenic |
GCCCTATTCATCCCATTAAT+CGG | 0.434362 | 3.4:+24336732 | None:intergenic |
ATAATGGAGAGGGATGTTAG+AGG | 0.448969 | 3.4:+24336584 | None:intergenic |
ATAGGGTTATGTAAAATTTG+TGG | 0.488073 | 3.4:+24336528 | None:intergenic |
TTAAATGAGGTTGCAACATA+GGG | 0.493554 | 3.4:+24336511 | None:intergenic |
ACCTTTCCTTCCGCTTGACA+TGG | 0.495891 | 3.4:+24338369 | None:intergenic |
AGCAACATCTACACCACAAA+GGG | 0.498436 | 3.4:+24338237 | None:intergenic |
TGTATTCTCACCTAGTGAAA+AGG | 0.518205 | 3.4:-24338209 | MS.gene95517:intron |
GTTGATAGGAGTGCAATTCA+GGG | 0.537321 | 3.4:-24336651 | MS.gene95517:CDS |
TTCAACAATATGGGAGGAGG+AGG | 0.541923 | 3.4:-24336483 | MS.gene95517:CDS |
GCTTTGAGAAAGTCACTTGG+AGG | 0.544594 | 3.4:+24338299 | None:intergenic |
TTGTTGAAGCCAATTAAATG+AGG | 0.551491 | 3.4:+24336498 | None:intergenic |
AATCAACAACACACCGGATG+AGG | 0.554114 | 3.4:-24336823 | MS.gene95517:CDS |
GAAAACATCTCAGTTTGTTG+AGG | 0.554882 | 3.4:+24336552 | None:intergenic |
GGCTTCAACAATATGGGAGG+AGG | 0.561767 | 3.4:-24336486 | MS.gene95517:CDS |
CCGGATGAGGAGGAAAATCA+TGG | 0.584209 | 3.4:-24336810 | MS.gene95517:CDS |
CTTTCTCAAAGCGTCGTAGT+GGG | 0.584950 | 3.4:-24338288 | MS.gene95517:CDS |
ACCATGTCAAGCGGAAGGAA+AGG | 0.588345 | 3.4:-24338370 | MS.gene95517:CDS |
ACTTTCTCAAAGCGTCGTAG+TGG | 0.602122 | 3.4:-24338289 | MS.gene95517:CDS |
CAACAACACACCGGATGAGG+AGG | 0.602372 | 3.4:-24336820 | MS.gene95517:CDS |
ATTGGCTTCAACAATATGGG+AGG | 0.605743 | 3.4:-24336489 | MS.gene95517:CDS |
GACGCTTTGAGAAAGTCACT+TGG | 0.608413 | 3.4:+24338296 | None:intergenic |
TGTACTTCAACCATGTCAAG+CGG | 0.628063 | 3.4:-24338379 | None:intergenic |
CTTCAACCATGTCAAGCGGA+AGG | 0.628927 | 3.4:-24338375 | None:intergenic |
TCAAGCGGAAGGAAAGGTCG+TGG | 0.632671 | 3.4:-24338364 | MS.gene95517:CDS |
GGATTTGGCTGATAATGGAG+AGG | 0.633381 | 3.4:+24336573 | None:intergenic |
GAGCAACATCTACACCACAA+AGG | 0.657703 | 3.4:+24338236 | None:intergenic |
GATTTGGCTGATAATGGAGA+GGG | 0.685158 | 3.4:+24336574 | None:intergenic |
GATTCAAATCAACAACACAC+CGG | 0.728877 | 3.4:-24336829 | MS.gene95517:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAAAACAATAATAATAAA+GGG | + | chr3.4:24337806-24337825 | None:intergenic | 10.0% |
!! | TTAAAGTAAAATATTCTAAA+AGG | + | chr3.4:24336845-24336864 | None:intergenic | 10.0% |
!! | ATAATACTTGAAATAAACAA+AGG | + | chr3.4:24337189-24337208 | None:intergenic | 15.0% |
!! | GGTAAAAACAATAATAATAA+AGG | + | chr3.4:24337807-24337826 | None:intergenic | 15.0% |
!!! | ATTGTCTTTTATGTTATTTT+AGG | - | chr3.4:24336865-24336884 | MS.gene95517:intron | 15.0% |
!!! | TTATTTTAGGAATGAATATA+TGG | - | chr3.4:24336878-24336897 | MS.gene95517:intron | 15.0% |
!! | AAATCATTACCAACAAAAAA+TGG | + | chr3.4:24338231-24338250 | None:intergenic | 20.0% |
!! | TAAATTGCAAAGAAAGTAAA+AGG | + | chr3.4:24337233-24337252 | None:intergenic | 20.0% |
!! | TGAATCTAGATTAGAAATTA+GGG | + | chr3.4:24337391-24337410 | None:intergenic | 20.0% |
!!! | AACTTTTAATGAATGATTAG+AGG | + | chr3.4:24337865-24337884 | None:intergenic | 20.0% |
!!! | TGAATTATTCAAGAAGATTT+TGG | - | chr3.4:24338134-24338153 | MS.gene95517:intron | 20.0% |
! | AACCATGAAATTAGAAGTTT+AGG | - | chr3.4:24337731-24337750 | MS.gene95517:intron | 25.0% |
! | AACCTAAACTTCTAATTTCA+TGG | + | chr3.4:24337736-24337755 | None:intergenic | 25.0% |
! | ATAGGGTTATGTAAAATTTG+TGG | + | chr3.4:24338312-24338331 | None:intergenic | 25.0% |
! | CTTGAAATAAACAAAGGTAA+AGG | + | chr3.4:24337183-24337202 | None:intergenic | 25.0% |
! | GATTAACAATTATCAAACTG+TGG | - | chr3.4:24337424-24337443 | MS.gene95517:intron | 25.0% |
! | GTGAATCTAGATTAGAAATT+AGG | + | chr3.4:24337392-24337411 | None:intergenic | 25.0% |
! | TTAGAAACTAAGCAACTAAA+GGG | + | chr3.4:24337110-24337129 | None:intergenic | 25.0% |
!! | AAAGAAAATACCTTTTCACT+AGG | + | chr3.4:24336641-24336660 | None:intergenic | 25.0% |
!! | ATTATTCAAGAAGATTTTGG+TGG | - | chr3.4:24338137-24338156 | MS.gene95517:intron | 25.0% |
!! | TTAATTGGCTTCAACAATAT+GGG | - | chr3.4:24338345-24338364 | MS.gene95517:CDS | 25.0% |
!! | TTTAATTGGCTTCAACAATA+TGG | - | chr3.4:24338344-24338363 | MS.gene95517:CDS | 25.0% |
!!! | AGTGAAAAGGTATTTTCTTT+CGG | - | chr3.4:24336641-24336660 | MS.gene95517:CDS | 25.0% |
!!! | CAAACTTTTCCATTTTTTGT+TGG | - | chr3.4:24338219-24338238 | MS.gene95517:CDS | 25.0% |
!!! | TCTTTTTCATCTCAATCTTT+TGG | + | chr3.4:24336502-24336521 | None:intergenic | 25.0% |
!!! | TTCTTAGTCTTAGGATTATT+GGG | - | chr3.4:24337310-24337329 | MS.gene95517:intron | 25.0% |
!!! | TTTTAGGAATGAATATATGG+TGG | - | chr3.4:24336881-24336900 | MS.gene95517:intron | 25.0% |
AAGCAACTAAAGGGATAAAA+CGG | + | chr3.4:24337101-24337120 | None:intergenic | 30.0% | |
AGTAATCATGTCAGTGAAAT+AGG | - | chr3.4:24337622-24337641 | MS.gene95517:intron | 30.0% | |
ATGTTGCAACCTCATTTAAT+TGG | - | chr3.4:24338330-24338349 | MS.gene95517:CDS | 30.0% | |
ATTAAATGAGGTTGCAACAT+AGG | + | chr3.4:24338330-24338349 | None:intergenic | 30.0% | |
ATTAGGGTTACATGGAAATT+AGG | + | chr3.4:24337375-24337394 | None:intergenic | 30.0% | |
ATTGTTAATCCACGTTAAGA+CGG | + | chr3.4:24337414-24337433 | None:intergenic | 30.0% | |
CAATAATAATAAAGGGCCTT+AGG | + | chr3.4:24337799-24337818 | None:intergenic | 30.0% | |
CGCTTTATGAATTGATGTTT+GGG | + | chr3.4:24337489-24337508 | None:intergenic | 30.0% | |
CTTACTACTATTACTTCGAT+AGG | - | chr3.4:24337923-24337942 | MS.gene95517:intron | 30.0% | |
CTTAGAAACTAAGCAACTAA+AGG | + | chr3.4:24337111-24337130 | None:intergenic | 30.0% | |
GATTAGAAATTAGGGTTACA+TGG | + | chr3.4:24337383-24337402 | None:intergenic | 30.0% | |
TAATCTATGACTCATCACTA+CGG | + | chr3.4:24336754-24336773 | None:intergenic | 30.0% | |
TCATAGATTGCTATCTCTTT+GGG | - | chr3.4:24336684-24336703 | MS.gene95517:CDS | 30.0% | |
TCGCTTTATGAATTGATGTT+TGG | + | chr3.4:24337490-24337509 | None:intergenic | 30.0% | |
TTAAATGAGGTTGCAACATA+GGG | + | chr3.4:24338329-24338348 | None:intergenic | 30.0% | |
TTAGGGTTACATGGAAATTA+GGG | + | chr3.4:24337374-24337393 | None:intergenic | 30.0% | |
TTGTTGAAGCCAATTAAATG+AGG | + | chr3.4:24338342-24338361 | None:intergenic | 30.0% | |
! | ACACACTAATTTCTAAAGAC+CGG | + | chr3.4:24337710-24337729 | None:intergenic | 30.0% |
! | GAGAGAAAGTTGATTAGAAA+GGG | + | chr3.4:24337843-24337862 | None:intergenic | 30.0% |
!! | AAAGGATGATTGTTTTATGG+TGG | + | chr3.4:24337165-24337184 | None:intergenic | 30.0% |
!! | CTTCTTAGTCTTAGGATTAT+TGG | - | chr3.4:24337309-24337328 | MS.gene95517:intron | 30.0% |
!! | GGTAAAGGATGATTGTTTTA+TGG | + | chr3.4:24337168-24337187 | None:intergenic | 30.0% |
!! | TCTTAGTCTTAGGATTATTG+GGG | - | chr3.4:24337311-24337330 | MS.gene95517:intron | 30.0% |
!!! | GGTTTAGACATGTTTTGTTT+AGG | + | chr3.4:24337353-24337372 | None:intergenic | 30.0% |
AAGATGAACCAATGATCCTA+AGG | - | chr3.4:24337780-24337799 | MS.gene95517:intron | 35.0% | |
ATCAATTCATAAAGCGAGAG+CGG | - | chr3.4:24337493-24337512 | MS.gene95517:intron | 35.0% | |
CATAGATTGCTATCTCTTTG+GGG | - | chr3.4:24336685-24336704 | MS.gene95517:CDS | 35.0% | |
GATTACTAGAAGATGCATAG+AGG | + | chr3.4:24337609-24337628 | None:intergenic | 35.0% | |
GATTCAAATCAACAACACAC+CGG | - | chr3.4:24338008-24338027 | MS.gene95517:intron | 35.0% | |
GTCATAGATTGCTATCTCTT+TGG | - | chr3.4:24336683-24336702 | MS.gene95517:CDS | 35.0% | |
TAGCACCATAGAATTCATTG+AGG | - | chr3.4:24336724-24336743 | MS.gene95517:CDS | 35.0% | |
TCCGATTAATGGGATGAATA+GGG | - | chr3.4:24338104-24338123 | MS.gene95517:intron | 35.0% | |
TCTATGACCGTATCAACATT+TGG | + | chr3.4:24336671-24336690 | None:intergenic | 35.0% | |
TGTATTCTCACCTAGTGAAA+AGG | - | chr3.4:24336628-24336647 | MS.gene95517:CDS | 35.0% | |
TTGTTGCTCATCATGTTGAT+AGG | - | chr3.4:24338172-24338191 | MS.gene95517:intron | 35.0% | |
! | AGGAATGAATATATGGTGGA+AGG | - | chr3.4:24336885-24336904 | MS.gene95517:intron | 35.0% |
! | GGAGAGAAAGTTGATTAGAA+AGG | + | chr3.4:24337844-24337863 | None:intergenic | 35.0% |
! | TGAATTGAGTCTTTTGTGCA+AGG | - | chr3.4:24338053-24338072 | MS.gene95517:intron | 35.0% |
! | TGAATTGATGTTTGGGATGA+TGG | + | chr3.4:24337482-24337501 | None:intergenic | 35.0% |
! | TGAGTAGACTTCTTAGTCTT+AGG | - | chr3.4:24337301-24337320 | MS.gene95517:intron | 35.0% |
!! | ATCTCAGTTTGTTGAGGATT+TGG | + | chr3.4:24338282-24338301 | None:intergenic | 35.0% |
!! | GAAAACATCTCAGTTTGTTG+AGG | + | chr3.4:24338288-24338307 | None:intergenic | 35.0% |
!! | GTTTAGGTTTTGTCAAGTGA+AGG | - | chr3.4:24337747-24337766 | MS.gene95517:intron | 35.0% |
!!! | ACTCTTTTGCTGCTTTTCTT+CGG | - | chr3.4:24337049-24337068 | MS.gene95517:intron | 35.0% |
!!! | TCTATGGTGCTATTGTTTTG+CGG | + | chr3.4:24336716-24336735 | None:intergenic | 35.0% |
AAAACGGTAAAGCTGCAACA+GGG | + | chr3.4:24337085-24337104 | None:intergenic | 40.0% | |
AACATTGAGCTCACTCACTT+TGG | + | chr3.4:24337983-24338002 | None:intergenic | 40.0% | |
ACTCATGTTCATCGTAGACA+TGG | + | chr3.4:24337282-24337301 | None:intergenic | 40.0% | |
AGAAAGGGTTTGATTGCTGA+AGG | + | chr3.4:24337828-24337847 | None:intergenic | 40.0% | |
AGCAACATCTACACCACAAA+GGG | + | chr3.4:24336603-24336622 | None:intergenic | 40.0% | |
AGCGCAAGAATACGAAGATA+CGG | - | chr3.4:24336946-24336965 | MS.gene95517:intron | 40.0% | |
ATAAAGGGCCTTAGGATCAT+TGG | + | chr3.4:24337791-24337810 | None:intergenic | 40.0% | |
CGGTCATCCAAATGTTGATA+CGG | - | chr3.4:24336661-24336680 | MS.gene95517:CDS | 40.0% | |
GCCCTATTCATCCCATTAAT+CGG | + | chr3.4:24338108-24338127 | None:intergenic | 40.0% | |
GGAGGAAGAAGAGAGAAATA+CGG | + | chr3.4:24337261-24337280 | None:intergenic | 40.0% | |
GTCCGATTAATGGGATGAAT+AGG | - | chr3.4:24338103-24338122 | MS.gene95517:intron | 40.0% | |
GTGAGCCTCAATGAATTCTA+TGG | + | chr3.4:24336732-24336751 | None:intergenic | 40.0% | |
GTTGAGGATTTGGCTGATAA+TGG | + | chr3.4:24338272-24338291 | None:intergenic | 40.0% | |
TAAAACGGTAAAGCTGCAAC+AGG | + | chr3.4:24337086-24337105 | None:intergenic | 40.0% | |
TAAATTGACCAACTCCCTAG+CGG | - | chr3.4:24337888-24337907 | MS.gene95517:intron | 40.0% | |
TCATGTCAGTGAAATAGGCT+TGG | - | chr3.4:24337627-24337646 | MS.gene95517:intron | 40.0% | |
TGCTAGAAGTAAACTCTCAC+CGG | - | chr3.4:24337651-24337670 | MS.gene95517:intron | 40.0% | |
! | ATAATGGAGAGGGATGTTAG+AGG | + | chr3.4:24338256-24338275 | None:intergenic | 40.0% |
! | ATTGGCTTCAACAATATGGG+AGG | - | chr3.4:24338348-24338367 | MS.gene95517:CDS | 40.0% |
! | GTTGATAGGAGTGCAATTCA+GGG | - | chr3.4:24338186-24338205 | MS.gene95517:intron | 40.0% |
! | TGTTGATAGGAGTGCAATTC+AGG | - | chr3.4:24338185-24338204 | MS.gene95517:intron | 40.0% |
!! | AAAGCAGCAAAAGAGTGTTC+TGG | + | chr3.4:24337045-24337064 | None:intergenic | 40.0% |
!! | AAGCAGCAAAAGAGTGTTCT+GGG | + | chr3.4:24337044-24337063 | None:intergenic | 40.0% |
!! | GATTTGGCTGATAATGGAGA+GGG | + | chr3.4:24338266-24338285 | None:intergenic | 40.0% |
!! | GTTCAAGGCTCAATTTTGGT+GGG | - | chr3.4:24338077-24338096 | MS.gene95517:intron | 40.0% |
!!! | CTCTTTTGCTGCTTTTCTTC+GGG | - | chr3.4:24337050-24337069 | MS.gene95517:intron | 40.0% |
AAAGCTGCAACAGGGTAACT+TGG | + | chr3.4:24337077-24337096 | None:intergenic | 45.0% | |
AACTCTCACCGGACTTTCAT+CGG | - | chr3.4:24337662-24337681 | MS.gene95517:intron | 45.0% | |
AAGCTGCAACAGGGTAACTT+GGG | + | chr3.4:24337076-24337095 | None:intergenic | 45.0% | |
AATATGGGAGGAGGAGGATA+TGG | - | chr3.4:24338360-24338379 | MS.gene95517:CDS | 45.0% | |
AATCAACAACACACCGGATG+AGG | - | chr3.4:24338014-24338033 | MS.gene95517:intron | 45.0% | |
ACTTTCATCGGAAAGGTGAG+GGG | - | chr3.4:24337674-24337693 | MS.gene95517:intron | 45.0% | |
CATGTTCATCGTAGACATGG+AGG | + | chr3.4:24337279-24337298 | None:intergenic | 45.0% | |
CGCAAGAATACGAAGATACG+GGG | - | chr3.4:24336948-24336967 | MS.gene95517:intron | 45.0% | |
CTAGATTCACCGTCTTAACG+TGG | - | chr3.4:24337402-24337421 | MS.gene95517:intron | 45.0% | |
GACTTTCATCGGAAAGGTGA+GGG | - | chr3.4:24337673-24337692 | MS.gene95517:intron | 45.0% | |
GAGCAACATCTACACCACAA+AGG | + | chr3.4:24336604-24336623 | None:intergenic | 45.0% | |
GCGCAAGAATACGAAGATAC+GGG | - | chr3.4:24336947-24336966 | MS.gene95517:intron | 45.0% | |
TCAAACTGTGGAAGCGAAAG+CGG | - | chr3.4:24337436-24337455 | MS.gene95517:intron | 45.0% | |
TCACCTTTCCGATGAAAGTC+CGG | + | chr3.4:24337673-24337692 | None:intergenic | 45.0% | |
TGCCTTGGAGCAAAAGAAAG+AGG | - | chr3.4:24336908-24336927 | MS.gene95517:intron | 45.0% | |
TGGAGCAAAAGAAAGAGGAC+TGG | - | chr3.4:24336913-24336932 | MS.gene95517:intron | 45.0% | |
TTCAACAATATGGGAGGAGG+AGG | - | chr3.4:24338354-24338373 | MS.gene95517:CDS | 45.0% | |
! | AGGCGTTCAAGGCTCAATTT+TGG | - | chr3.4:24338073-24338092 | MS.gene95517:intron | 45.0% |
! | AGTGAGTTTTGCTCCCTTTG+TGG | - | chr3.4:24336587-24336606 | MS.gene95517:CDS | 45.0% |
! | CCATGATTTTCCTCCTCATC+CGG | + | chr3.4:24338030-24338049 | None:intergenic | 45.0% |
! | CGTTCAAGGCTCAATTTTGG+TGG | - | chr3.4:24338076-24338095 | MS.gene95517:intron | 45.0% |
! | GTCCTCTTTCTTTTGCTCCA+AGG | + | chr3.4:24336913-24336932 | None:intergenic | 45.0% |
!! | AAGTAGAGTATCGTTCCGCT+AGG | + | chr3.4:24337906-24337925 | None:intergenic | 45.0% |
!! | ACTTTCTCAAAGCGTCGTAG+TGG | - | chr3.4:24336548-24336567 | MS.gene95517:CDS | 45.0% |
!! | AGCAGCAAAAGAGTGTTCTG+GGG | + | chr3.4:24337043-24337062 | None:intergenic | 45.0% |
!! | AGTAGAGTATCGTTCCGCTA+GGG | + | chr3.4:24337905-24337924 | None:intergenic | 45.0% |
!! | ATATATGGTGGAAGGTGCCT+TGG | - | chr3.4:24336893-24336912 | MS.gene95517:intron | 45.0% |
!! | CTTTCTCAAAGCGTCGTAGT+GGG | - | chr3.4:24336549-24336568 | MS.gene95517:CDS | 45.0% |
!! | GACGCTTTGAGAAAGTCACT+TGG | + | chr3.4:24336544-24336563 | None:intergenic | 45.0% |
!! | GCTTTGAGAAAGTCACTTGG+AGG | + | chr3.4:24336541-24336560 | None:intergenic | 45.0% |
!! | GGATTTGGCTGATAATGGAG+AGG | + | chr3.4:24338267-24338286 | None:intergenic | 45.0% |
!! | TCTTTTGTGCAAGGCGTTCA+AGG | - | chr3.4:24338062-24338081 | MS.gene95517:intron | 45.0% |
!!! | ATGGTGCTATTGTTTTGCGG+TGG | + | chr3.4:24336713-24336732 | None:intergenic | 45.0% |
!!! | TGGTGCTATTGTTTTGCGGT+GGG | + | chr3.4:24336712-24336731 | None:intergenic | 45.0% |
ATTCCCCCAACTCAGAAGCT+TGG | - | chr3.4:24336980-24336999 | MS.gene95517:intron | 50.0% | |
CCGGATGAGGAGGAAAATCA+TGG | - | chr3.4:24338027-24338046 | MS.gene95517:intron | 50.0% | |
GGACTTTCATCGGAAAGGTG+AGG | - | chr3.4:24337672-24337691 | MS.gene95517:intron | 50.0% | |
GGCTTCAACAATATGGGAGG+AGG | - | chr3.4:24338351-24338370 | MS.gene95517:CDS | 50.0% | |
TCACCGGACTTTCATCGGAA+AGG | - | chr3.4:24337667-24337686 | MS.gene95517:intron | 50.0% | |
TCACTTTGGCGCTACGTGAT+AGG | + | chr3.4:24337969-24337988 | None:intergenic | 50.0% | |
! | GGTGGGCTTGTCCGATTAAT+GGG | - | chr3.4:24338094-24338113 | MS.gene95517:intron | 50.0% |
!! | CAAAAGAGTGTTCTGGGGAC+GGG | + | chr3.4:24337038-24337057 | None:intergenic | 50.0% |
!! | GCAAAAGAGTGTTCTGGGGA+CGG | + | chr3.4:24337039-24337058 | None:intergenic | 50.0% |
!! | TGGTGGGCTTGTCCGATTAA+TGG | - | chr3.4:24338093-24338112 | MS.gene95517:intron | 50.0% |
AACTGTGGAAGCGAAAGCGG+AGG | - | chr3.4:24337439-24337458 | MS.gene95517:intron | 55.0% | |
ACTGTGGAAGCGAAAGCGGA+GGG | - | chr3.4:24337440-24337459 | MS.gene95517:intron | 55.0% | |
ATCGGAAAGGTGAGGGGCTA+AGG | - | chr3.4:24337680-24337699 | MS.gene95517:intron | 55.0% | |
CAACAACACACCGGATGAGG+AGG | - | chr3.4:24338017-24338036 | MS.gene95517:intron | 55.0% | |
CCCAACTCAGAAGCTTGGCA+CGG | - | chr3.4:24336985-24337004 | MS.gene95517:intron | 55.0% | |
CCGTGCCAAGCTTCTGAGTT+GGG | + | chr3.4:24336988-24337007 | None:intergenic | 55.0% | |
CGAGAGCGGAGTCTTGATGT+TGG | - | chr3.4:24337507-24337526 | MS.gene95517:intron | 55.0% | |
CGTGCCAAGCTTCTGAGTTG+GGG | + | chr3.4:24336987-24337006 | None:intergenic | 55.0% | |
GTATCGTTCCGCTAGGGAGT+TGG | + | chr3.4:24337899-24337918 | None:intergenic | 55.0% | |
TCAAGCGGAAGGAAAGGTCG+TGG | - | chr3.4:24336473-24336492 | MS.gene95517:CDS | 55.0% | |
TCGGAAAGGTGAGGGGCTAA+GGG | - | chr3.4:24337681-24337700 | MS.gene95517:intron | 55.0% | |
! | GTGCCAAGCTTCTGAGTTGG+GGG | + | chr3.4:24336986-24337005 | None:intergenic | 55.0% |
AGGACCAAACCGCAAGCGCA+CGG | + | chr3.4:24337949-24337968 | None:intergenic | 60.0% | |
GCCGTGCCAAGCTTCTGAGT+TGG | + | chr3.4:24336989-24337008 | None:intergenic | 60.0% | |
GGTGAGGGGCTAAGGGAAAC+CGG | - | chr3.4:24337688-24337707 | MS.gene95517:intron | 60.0% | |
TTCGATAGGCCGTGCGCTTG+CGG | - | chr3.4:24337937-24337956 | MS.gene95517:intron | 60.0% | |
!! | AGCGTCGTAGTGGGCTCTTC+AGG | - | chr3.4:24336558-24336577 | MS.gene95517:CDS | 60.0% |
GCCCGTGCCAACATGTGGCA+CGG | - | chr3.4:24337007-24337026 | MS.gene95517:intron | 65.0% | |
GCCGTGCCACATGTTGGCAC+GGG | + | chr3.4:24337011-24337030 | None:intergenic | 65.0% | |
GGCCGTGCCACATGTTGGCA+CGG | + | chr3.4:24337012-24337031 | None:intergenic | 65.0% | |
TAGGCCGTGCGCTTGCGGTT+TGG | - | chr3.4:24337942-24337961 | MS.gene95517:intron | 65.0% | |
!! | GAGTGTTCTGGGGACGGGCA+CGG | + | chr3.4:24337033-24337052 | None:intergenic | 65.0% |
GCACGGCCCGTGCCAACATG+TGG | - | chr3.4:24337002-24337021 | MS.gene95517:intron | 70.0% | |
GGCACGGCCGTGCCACATGT+TGG | + | chr3.4:24337017-24337036 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 24336470 | 24338389 | 24336470 | ID=MS.gene95517 |
chr3.4 | mRNA | 24336470 | 24338389 | 24336470 | ID=MS.gene95517.t1;Parent=MS.gene95517 |
chr3.4 | exon | 24338210 | 24338389 | 24338210 | ID=MS.gene95517.t1.exon1;Parent=MS.gene95517.t1 |
chr3.4 | CDS | 24338210 | 24338389 | 24338210 | ID=cds.MS.gene95517.t1;Parent=MS.gene95517.t1 |
chr3.4 | exon | 24336470 | 24336865 | 24336470 | ID=MS.gene95517.t1.exon2;Parent=MS.gene95517.t1 |
chr3.4 | CDS | 24336470 | 24336865 | 24336470 | ID=cds.MS.gene95517.t1;Parent=MS.gene95517.t1 |
Gene Sequence |
Protein sequence |