Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95576.t1 | XP_003605947.1 | 96.5 | 538 | 19 | 0 | 1 | 538 | 1 | 538 | 0.00E+00 | 1091.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95576.t1 | Q00624 | 55.5 | 533 | 226 | 5 | 8 | 531 | 10 | 540 | 2.1e-174 | 613.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95576.t1 | G7JDL2 | 96.5 | 538 | 19 | 0 | 1 | 538 | 1 | 538 | 0.0e+00 | 1091.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053173 | MS.gene95576 | 0.803591 | 3.24E-49 | -1.69E-46 |
MS.gene054551 | MS.gene95576 | 0.8109 | 9.16E-51 | -1.69E-46 |
MS.gene06093 | MS.gene95576 | 0.80758 | 4.71E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95576.t1 | MTR_4g049390 | 96.468 | 538 | 19 | 0 | 1 | 538 | 1 | 538 | 0.0 | 1058 |
MS.gene95576.t1 | MTR_4g048350 | 94.796 | 538 | 27 | 1 | 1 | 538 | 1 | 537 | 0.0 | 1042 |
MS.gene95576.t1 | MTR_2g088080 | 87.861 | 519 | 63 | 0 | 18 | 536 | 21 | 539 | 0.0 | 942 |
MS.gene95576.t1 | MTR_2g088080 | 86.681 | 458 | 61 | 0 | 79 | 536 | 1 | 458 | 0.0 | 818 |
MS.gene95576.t1 | MTR_4g075690 | 71.241 | 532 | 152 | 1 | 6 | 537 | 9 | 539 | 0.0 | 803 |
MS.gene95576.t1 | MTR_1g026410 | 72.316 | 531 | 147 | 0 | 7 | 537 | 9 | 539 | 0.0 | 801 |
MS.gene95576.t1 | MTR_3g115050 | 69.303 | 531 | 163 | 0 | 7 | 537 | 10 | 540 | 0.0 | 793 |
MS.gene95576.t1 | MTR_4g132320 | 72.075 | 530 | 146 | 1 | 9 | 536 | 11 | 540 | 0.0 | 776 |
MS.gene95576.t1 | MTR_8g479390 | 60.348 | 517 | 202 | 2 | 22 | 537 | 26 | 540 | 0.0 | 659 |
MS.gene95576.t1 | MTR_5g018270 | 61.731 | 520 | 195 | 2 | 18 | 537 | 22 | 537 | 0.0 | 656 |
MS.gene95576.t1 | MTR_4g075690 | 70.227 | 440 | 130 | 1 | 6 | 445 | 9 | 447 | 0.0 | 656 |
MS.gene95576.t1 | MTR_8g479380 | 55.056 | 534 | 232 | 4 | 6 | 533 | 3 | 534 | 0.0 | 620 |
MS.gene95576.t1 | MTR_4g083190 | 51.763 | 539 | 248 | 5 | 4 | 531 | 1 | 538 | 0.0 | 559 |
MS.gene95576.t1 | MTR_4g083210 | 50.847 | 531 | 256 | 4 | 5 | 531 | 3 | 532 | 0.0 | 551 |
MS.gene95576.t1 | MTR_3g083440 | 51.215 | 535 | 252 | 4 | 5 | 531 | 3 | 536 | 0.0 | 549 |
MS.gene95576.t1 | MTR_3g083390 | 51.028 | 535 | 253 | 4 | 5 | 531 | 3 | 536 | 0.0 | 546 |
MS.gene95576.t1 | MTR_3g083430 | 51.028 | 535 | 253 | 4 | 5 | 531 | 3 | 536 | 0.0 | 546 |
MS.gene95576.t1 | MTR_3g083400 | 51.028 | 535 | 253 | 4 | 5 | 531 | 3 | 536 | 0.0 | 545 |
MS.gene95576.t1 | MTR_3g083450 | 52.510 | 518 | 237 | 4 | 22 | 531 | 21 | 537 | 0.0 | 542 |
MS.gene95576.t1 | MTR_4g101650 | 51.371 | 547 | 242 | 7 | 9 | 532 | 6 | 551 | 0.0 | 534 |
MS.gene95576.t1 | MTR_3g008580 | 48.556 | 554 | 260 | 9 | 1 | 531 | 1 | 552 | 2.36e-179 | 518 |
MS.gene95576.t1 | MTR_3g083410 | 51.220 | 492 | 231 | 4 | 48 | 531 | 10 | 500 | 1.12e-173 | 500 |
MS.gene95576.t1 | MTR_7g051440 | 49.430 | 526 | 246 | 7 | 24 | 531 | 26 | 549 | 5.19e-169 | 491 |
MS.gene95576.t1 | MTR_1g090707 | 45.966 | 533 | 274 | 8 | 11 | 532 | 9 | 538 | 3.79e-157 | 461 |
MS.gene95576.t1 | MTR_4g133150 | 62.500 | 208 | 59 | 2 | 131 | 336 | 21 | 211 | 3.08e-78 | 245 |
MS.gene95576.t1 | MTR_5g020620 | 30.335 | 567 | 349 | 19 | 1 | 530 | 4 | 561 | 6.96e-58 | 202 |
MS.gene95576.t1 | MTR_5g020600 | 29.144 | 549 | 336 | 18 | 23 | 530 | 30 | 566 | 2.93e-54 | 192 |
MS.gene95576.t1 | MTR_8g091390 | 29.145 | 573 | 318 | 16 | 22 | 535 | 29 | 572 | 9.91e-51 | 183 |
MS.gene95576.t1 | MTR_3g078740 | 27.303 | 597 | 346 | 16 | 4 | 531 | 8 | 585 | 1.62e-50 | 183 |
MS.gene95576.t1 | MTR_4g015120 | 28.023 | 521 | 323 | 15 | 7 | 490 | 12 | 517 | 8.50e-50 | 180 |
MS.gene95576.t1 | MTR_3g462760 | 27.188 | 537 | 352 | 13 | 27 | 530 | 26 | 556 | 1.56e-49 | 179 |
MS.gene95576.t1 | MTR_5g081810 | 27.695 | 538 | 338 | 13 | 32 | 530 | 4 | 529 | 2.72e-49 | 178 |
MS.gene95576.t1 | MTR_5g069680 | 26.512 | 562 | 366 | 16 | 8 | 530 | 5 | 558 | 2.07e-48 | 176 |
MS.gene95576.t1 | MTR_3g078700 | 27.057 | 547 | 355 | 15 | 8 | 531 | 11 | 536 | 4.89e-47 | 172 |
MS.gene95576.t1 | MTR_5g073210 | 27.592 | 569 | 353 | 18 | 7 | 530 | 6 | 560 | 1.61e-44 | 166 |
MS.gene95576.t1 | MTR_3g101640 | 28.309 | 544 | 323 | 19 | 1 | 490 | 1 | 531 | 5.93e-43 | 161 |
MS.gene95576.t1 | MTR_8g027375 | 26.538 | 520 | 341 | 13 | 8 | 490 | 16 | 531 | 1.23e-42 | 160 |
MS.gene95576.t1 | MTR_3g071890 | 27.138 | 538 | 348 | 15 | 8 | 507 | 16 | 547 | 1.76e-41 | 157 |
MS.gene95576.t1 | MTR_3g078730 | 27.003 | 574 | 320 | 19 | 8 | 531 | 11 | 535 | 4.53e-40 | 153 |
MS.gene95576.t1 | MTR_5g083360 | 27.324 | 527 | 332 | 16 | 9 | 490 | 7 | 527 | 1.29e-39 | 152 |
MS.gene95576.t1 | MTR_2g008330 | 24.955 | 561 | 375 | 15 | 11 | 530 | 24 | 579 | 1.79e-39 | 152 |
MS.gene95576.t1 | MTR_7g062250 | 24.648 | 568 | 374 | 15 | 8 | 530 | 20 | 578 | 3.83e-39 | 150 |
MS.gene95576.t1 | MTR_3g101635 | 27.407 | 540 | 326 | 17 | 1 | 490 | 3 | 526 | 9.66e-39 | 149 |
MS.gene95576.t1 | MTR_7g458880 | 25.859 | 553 | 356 | 18 | 27 | 530 | 33 | 580 | 1.58e-38 | 149 |
MS.gene95576.t1 | MTR_7g060460 | 26.459 | 514 | 323 | 17 | 27 | 490 | 33 | 541 | 3.90e-37 | 145 |
MS.gene95576.t1 | MTR_7g058690 | 26.172 | 512 | 326 | 17 | 27 | 490 | 33 | 540 | 8.93e-37 | 144 |
MS.gene95576.t1 | MTR_7g065980 | 26.104 | 498 | 309 | 18 | 44 | 490 | 42 | 531 | 1.63e-36 | 143 |
MS.gene95576.t1 | MTR_7g065970 | 26.163 | 516 | 325 | 15 | 29 | 495 | 27 | 535 | 6.06e-35 | 139 |
MS.gene95576.t1 | MTR_4g064530 | 25.099 | 506 | 333 | 14 | 27 | 490 | 44 | 545 | 5.46e-33 | 133 |
MS.gene95576.t1 | MTR_7g062310 | 23.732 | 552 | 368 | 14 | 27 | 530 | 47 | 593 | 1.21e-32 | 132 |
MS.gene95576.t1 | MTR_4g064530 | 25.000 | 508 | 333 | 15 | 27 | 490 | 44 | 547 | 1.81e-31 | 128 |
MS.gene95576.t1 | MTR_4g019225 | 25.000 | 552 | 357 | 17 | 29 | 530 | 28 | 572 | 3.89e-31 | 127 |
MS.gene95576.t1 | MTR_4g133160 | 54.128 | 109 | 36 | 2 | 412 | 520 | 1 | 95 | 3.46e-30 | 114 |
MS.gene95576.t1 | MTR_5g018290 | 62.121 | 66 | 25 | 0 | 472 | 537 | 5 | 70 | 2.92e-23 | 93.6 |
MS.gene95576.t1 | MTR_5g081790 | 27.891 | 147 | 97 | 3 | 27 | 165 | 24 | 169 | 1.50e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95576.t1 | AT1G76160 | 71.698 | 530 | 148 | 2 | 7 | 536 | 9 | 536 | 0.0 | 801 |
MS.gene95576.t1 | AT4G22010 | 70.919 | 533 | 153 | 2 | 7 | 537 | 5 | 537 | 0.0 | 798 |
MS.gene95576.t1 | AT1G41830 | 67.547 | 530 | 171 | 1 | 8 | 537 | 10 | 538 | 0.0 | 765 |
MS.gene95576.t1 | AT1G21850 | 67.420 | 531 | 171 | 2 | 7 | 537 | 9 | 537 | 0.0 | 764 |
MS.gene95576.t1 | AT1G21860 | 66.038 | 530 | 178 | 2 | 8 | 537 | 10 | 537 | 0.0 | 748 |
MS.gene95576.t1 | AT4G38420 | 63.619 | 536 | 189 | 3 | 8 | 537 | 11 | 546 | 0.0 | 712 |
MS.gene95576.t1 | AT4G28090 | 59.848 | 528 | 208 | 4 | 9 | 533 | 11 | 537 | 0.0 | 667 |
MS.gene95576.t1 | AT5G66920 | 57.500 | 520 | 219 | 1 | 18 | 537 | 28 | 545 | 0.0 | 634 |
MS.gene95576.t1 | AT4G38420 | 62.420 | 471 | 171 | 3 | 8 | 472 | 11 | 481 | 0.0 | 609 |
MS.gene95576.t1 | AT4G37160 | 54.340 | 530 | 238 | 3 | 7 | 533 | 9 | 537 | 0.0 | 583 |
MS.gene95576.t1 | AT1G55570 | 54.749 | 537 | 230 | 5 | 8 | 535 | 13 | 545 | 0.0 | 582 |
MS.gene95576.t1 | AT3G13400 | 53.803 | 539 | 240 | 4 | 5 | 535 | 5 | 542 | 0.0 | 576 |
MS.gene95576.t1 | AT3G13400 | 53.803 | 539 | 240 | 4 | 5 | 535 | 5 | 542 | 0.0 | 576 |
MS.gene95576.t1 | AT2G23630 | 56.093 | 517 | 226 | 1 | 17 | 533 | 25 | 540 | 0.0 | 575 |
MS.gene95576.t1 | AT2G23630 | 56.093 | 517 | 226 | 1 | 17 | 533 | 20 | 535 | 0.0 | 575 |
MS.gene95576.t1 | AT1G55560 | 53.084 | 535 | 242 | 4 | 9 | 535 | 8 | 541 | 0.0 | 572 |
MS.gene95576.t1 | AT4G38420 | 62.162 | 444 | 162 | 3 | 8 | 445 | 11 | 454 | 0.0 | 572 |
MS.gene95576.t1 | AT3G13390 | 55.747 | 522 | 221 | 4 | 23 | 535 | 24 | 544 | 0.0 | 571 |
MS.gene95576.t1 | AT4G12420 | 50.635 | 551 | 249 | 7 | 1 | 531 | 1 | 548 | 0.0 | 549 |
MS.gene95576.t1 | AT4G12420 | 50.635 | 551 | 249 | 7 | 1 | 531 | 1 | 548 | 0.0 | 549 |
MS.gene95576.t1 | AT5G48450 | 49.534 | 537 | 257 | 8 | 8 | 532 | 10 | 544 | 0.0 | 526 |
MS.gene95576.t1 | AT5G48450 | 49.534 | 537 | 257 | 8 | 8 | 532 | 10 | 544 | 0.0 | 525 |
MS.gene95576.t1 | AT5G51480 | 48.790 | 537 | 254 | 8 | 15 | 531 | 16 | 551 | 6.96e-179 | 516 |
MS.gene95576.t1 | AT1G75790 | 47.874 | 541 | 270 | 4 | 4 | 533 | 5 | 544 | 1.84e-177 | 511 |
MS.gene95576.t1 | AT4G25240 | 49.446 | 542 | 252 | 8 | 10 | 531 | 12 | 551 | 1.98e-176 | 510 |
MS.gene95576.t1 | AT4G25240 | 49.446 | 542 | 252 | 8 | 10 | 531 | 12 | 551 | 1.98e-176 | 510 |
MS.gene95576.t1 | AT4G37160 | 55.656 | 442 | 192 | 3 | 7 | 445 | 9 | 449 | 8.70e-173 | 496 |
MS.gene95576.t1 | AT5G21105 | 28.183 | 589 | 338 | 20 | 3 | 531 | 13 | 576 | 3.87e-55 | 195 |
MS.gene95576.t1 | AT5G21105 | 28.938 | 546 | 308 | 19 | 3 | 488 | 13 | 538 | 6.76e-54 | 191 |
MS.gene95576.t1 | AT4G39830 | 27.336 | 578 | 352 | 15 | 9 | 533 | 18 | 580 | 2.28e-53 | 190 |
MS.gene95576.t1 | AT5G21100 | 27.648 | 557 | 324 | 18 | 31 | 531 | 28 | 561 | 1.42e-52 | 188 |
MS.gene95576.t1 | AT2G38080 | 27.434 | 565 | 368 | 14 | 1 | 530 | 1 | 558 | 1.01e-51 | 186 |
MS.gene95576.t1 | AT5G58910 | 27.337 | 567 | 366 | 14 | 4 | 530 | 7 | 567 | 4.35e-51 | 184 |
MS.gene95576.t1 | AT5G58910 | 27.337 | 567 | 365 | 15 | 4 | 530 | 7 | 566 | 2.05e-49 | 179 |
MS.gene95576.t1 | AT5G01190 | 25.874 | 572 | 368 | 16 | 1 | 530 | 1 | 558 | 2.27e-46 | 171 |
MS.gene95576.t1 | AT2G46570 | 26.916 | 509 | 316 | 14 | 27 | 490 | 32 | 529 | 1.68e-44 | 166 |
MS.gene95576.t1 | AT5G58910 | 27.725 | 523 | 325 | 15 | 48 | 530 | 14 | 523 | 4.29e-44 | 164 |
MS.gene95576.t1 | AT5G03260 | 26.429 | 560 | 364 | 16 | 9 | 530 | 8 | 557 | 8.16e-44 | 164 |
MS.gene95576.t1 | AT2G30210 | 27.799 | 536 | 335 | 18 | 1 | 490 | 1 | 530 | 2.01e-43 | 163 |
MS.gene95576.t1 | AT5G01190 | 25.524 | 572 | 356 | 17 | 1 | 530 | 1 | 544 | 3.89e-43 | 161 |
MS.gene95576.t1 | AT4G39830 | 27.383 | 493 | 291 | 14 | 93 | 533 | 6 | 483 | 2.72e-40 | 152 |
MS.gene95576.t1 | AT4G39830 | 27.383 | 493 | 291 | 14 | 93 | 533 | 8 | 485 | 3.19e-40 | 152 |
MS.gene95576.t1 | AT5G01050 | 27.273 | 572 | 353 | 19 | 10 | 532 | 13 | 570 | 1.10e-39 | 152 |
MS.gene95576.t1 | AT1G18140 | 25.758 | 594 | 350 | 19 | 10 | 530 | 6 | 581 | 2.12e-39 | 151 |
MS.gene95576.t1 | AT5G09360 | 25.360 | 556 | 371 | 16 | 6 | 524 | 16 | 564 | 7.00e-38 | 147 |
MS.gene95576.t1 | AT5G01040 | 27.547 | 530 | 319 | 18 | 10 | 490 | 13 | 526 | 3.86e-37 | 145 |
MS.gene95576.t1 | AT2G40370 | 24.813 | 536 | 347 | 13 | 7 | 490 | 9 | 540 | 5.25e-37 | 145 |
MS.gene95576.t1 | AT5G05390 | 25.667 | 487 | 323 | 11 | 41 | 490 | 41 | 525 | 1.77e-36 | 143 |
MS.gene95576.t1 | AT5G07130 | 27.119 | 531 | 328 | 20 | 10 | 490 | 8 | 529 | 4.78e-36 | 142 |
MS.gene95576.t1 | AT5G48100 | 27.403 | 489 | 301 | 15 | 48 | 490 | 43 | 523 | 4.87e-36 | 142 |
MS.gene95576.t1 | AT2G29130 | 25.394 | 508 | 331 | 15 | 27 | 490 | 30 | 533 | 6.76e-36 | 141 |
MS.gene95576.t1 | AT4G39830 | 26.572 | 493 | 282 | 14 | 93 | 533 | 8 | 472 | 9.44e-36 | 139 |
MS.gene95576.t1 | AT2G46570 | 26.549 | 452 | 276 | 14 | 84 | 490 | 4 | 444 | 1.51e-34 | 136 |
MS.gene95576.t1 | AT3G09220 | 24.858 | 527 | 344 | 14 | 7 | 490 | 10 | 527 | 1.87e-33 | 134 |
MS.gene95576.t1 | AT5G21105 | 28.249 | 354 | 206 | 11 | 205 | 531 | 53 | 385 | 3.80e-31 | 125 |
MS.gene95576.t1 | AT5G60020 | 23.489 | 579 | 378 | 18 | 8 | 530 | 8 | 577 | 9.89e-31 | 126 |
MS.gene95576.t1 | AT5G60020 | 23.562 | 539 | 349 | 17 | 48 | 530 | 14 | 545 | 1.72e-29 | 122 |
MS.gene95576.t1 | AT5G60020 | 24.132 | 547 | 350 | 18 | 8 | 498 | 8 | 545 | 3.11e-29 | 122 |
MS.gene95576.t1 | AT5G07130 | 26.444 | 450 | 275 | 18 | 90 | 490 | 2 | 444 | 1.53e-23 | 104 |
MS.gene95576.t1 | AT5G07130 | 26.444 | 450 | 275 | 18 | 90 | 490 | 2 | 444 | 1.53e-23 | 104 |
MS.gene95576.t1 | AT3G09220 | 24.651 | 430 | 283 | 11 | 100 | 490 | 3 | 430 | 3.89e-22 | 99.8 |
Find 146 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTCTGCTGGAAGTGTTTC+TGG | 0.146839 | 4.3:-50156311 | MS.gene95576:CDS |
GAATTGGGCAAGACAGTATT+TGG | 0.172946 | 4.3:-50154577 | MS.gene95576:CDS |
CAAACAATGTTGTGTCTTCT+TGG | 0.193584 | 4.3:-50168920 | MS.gene95576:CDS |
ATGAACCTTTCCTCATTTCT+TGG | 0.290193 | 4.3:-50168529 | MS.gene95576:intron |
TGGTAGGTTCCTTGTGGATT+TGG | 0.297781 | 4.3:+50155537 | None:intergenic |
GACTCACTTGACATTCATTT+GGG | 0.313425 | 4.3:-50156449 | MS.gene95576:CDS |
CCACAAGGAACCTACCATTA+TGG | 0.317959 | 4.3:-50155531 | MS.gene95576:CDS |
CCGCCACCGGTGGGGTTGTC+CGG | 0.319670 | 4.3:+50155345 | None:intergenic |
TGACTCACTTGACATTCATT+TGG | 0.322743 | 4.3:-50156450 | MS.gene95576:CDS |
CAGGGAAGACTTACAGATTC+CGG | 0.326068 | 4.3:-50156574 | MS.gene95576:CDS |
GTACCAATCTCCTGCCAATA+TGG | 0.328899 | 4.3:+50167562 | None:intergenic |
AATACACTCTAAGATAAAAT+TGG | 0.336664 | 4.3:+50154550 | None:intergenic |
ATCCGGAGATTTCACCATAT+TGG | 0.345336 | 4.3:-50167576 | MS.gene95576:CDS |
TTGATAAATGGACAATTTCC+AGG | 0.349584 | 4.3:-50168611 | MS.gene95576:CDS |
GTTCCTTGTGGATTTGGTCT+TGG | 0.355975 | 4.3:+50155543 | None:intergenic |
CAAATGGAGAAGATCCTTAC+AGG | 0.364480 | 4.3:-50168873 | MS.gene95576:CDS |
CTCCACAAAACCTCGAAAAT+CGG | 0.365811 | 4.3:+50155293 | None:intergenic |
CACAAGGCAGCAGGAGGTTA+TGG | 0.375456 | 4.3:-50167650 | MS.gene95576:CDS |
TTGCAATCATGGCACATTGA+TGG | 0.376663 | 4.3:-50155243 | MS.gene95576:CDS |
TATAATTGGAATGTTACATA+TGG | 0.378868 | 4.3:-50168847 | MS.gene95576:CDS |
TGAAGTGCATTGCTTGGAAT+AGG | 0.394371 | 4.3:+50154498 | None:intergenic |
TCATCTCTCGATGAATTTGC+AGG | 0.394878 | 4.3:+50154525 | None:intergenic |
CTGAAGATACTTTGCAATCA+TGG | 0.396158 | 4.3:-50155254 | MS.gene95576:CDS |
TTGAACAAGCTCGCTCTCTA+AGG | 0.396269 | 4.3:-50156247 | MS.gene95576:intron |
CAAGCTTCATCTTATGCCCT+TGG | 0.398188 | 4.3:+50156510 | None:intergenic |
GTTTCTGGTCCTCTTCCTGC+TGG | 0.399456 | 4.3:-50156296 | MS.gene95576:CDS |
GGACATAGCTTCTTTGTAGT+AGG | 0.408807 | 4.3:-50155222 | MS.gene95576:CDS |
CATGATTGCAAAGTATCTTC+AGG | 0.417916 | 4.3:+50155255 | None:intergenic |
TCACCATATTGGCAGGAGAT+TGG | 0.428797 | 4.3:-50167565 | MS.gene95576:CDS |
GGGGCAGACGTATTCTGTAT+TGG | 0.447694 | 4.3:-50156429 | MS.gene95576:CDS |
CCCTTGGATTCTGAAATTGA+TGG | 0.448632 | 4.3:+50156526 | None:intergenic |
GGAATGTGAGGTCTGAGAAT+TGG | 0.449805 | 4.3:-50154593 | MS.gene95576:CDS |
GAAGTGCATTGCTTGGAATA+GGG | 0.450911 | 4.3:+50154499 | None:intergenic |
AAGTTCTGTCCTGGAGAGAT+TGG | 0.452707 | 4.3:+50167737 | None:intergenic |
CGCCACCGGTGGGGTTGTCC+GGG | 0.453611 | 4.3:+50155346 | None:intergenic |
TTGTGTTTATCATTCCATAA+TGG | 0.454708 | 4.3:+50155517 | None:intergenic |
GAATGTGAGGTCTGAGAATT+GGG | 0.454791 | 4.3:-50154592 | MS.gene95576:CDS |
CCATTGATGACAAGTCCATC+AGG | 0.456809 | 4.3:+50167401 | None:intergenic |
AGTGATCTTCCTTTCCCTGA+TGG | 0.460805 | 4.3:-50167416 | MS.gene95576:CDS |
ATTTCAGTGGTTGGTCCAGC+AGG | 0.462597 | 4.3:+50156281 | None:intergenic |
CCGGACAACCCCACCGGTGG+CGG | 0.466606 | 4.3:-50155345 | MS.gene95576:CDS |
AATTGGGCAAGACAGTATTT+GGG | 0.467279 | 4.3:-50154576 | MS.gene95576:CDS |
ACTGACTCAATCTGTGGCCC+TGG | 0.467858 | 4.3:+50168593 | None:intergenic |
CCTGATGGACTTGTCATCAA+TGG | 0.468702 | 4.3:-50167401 | MS.gene95576:CDS |
CCACACTGAAGTGCATTGCT+TGG | 0.471125 | 4.3:+50154492 | None:intergenic |
TCCACTTGGAGTTAAACAAC+AGG | 0.471870 | 4.3:-50168815 | MS.gene95576:intron |
TACAGTGCAGTCCATGACTT+TGG | 0.473369 | 4.3:+50154642 | None:intergenic |
TACACATTCACTGTTGATCA+AGG | 0.474298 | 4.3:-50167362 | MS.gene95576:intron |
TCATGGCAAGATGGAATGTA+TGG | 0.475807 | 4.3:-50167770 | MS.gene95576:CDS |
AATTCTGCTCCAATTATCAA+TGG | 0.480816 | 4.3:-50155474 | MS.gene95576:CDS |
CTTGCATTCCACAAGGCAGC+AGG | 0.481451 | 4.3:-50167659 | MS.gene95576:CDS |
GACAACCCCACCGGTGGCGG+CGG | 0.483320 | 4.3:-50155342 | MS.gene95576:CDS |
TAATCCCCACATTTGATATC+CGG | 0.487792 | 4.3:+50156555 | None:intergenic |
TTACTTGTTGCATGTGCAAA+TGG | 0.488058 | 4.3:-50168889 | MS.gene95576:CDS |
CTTCATTACAGTAACTCTGC+TGG | 0.493285 | 4.3:-50156323 | MS.gene95576:CDS |
ATCACTTCCGCTATCTAAAA+CGG | 0.493695 | 4.3:+50167433 | None:intergenic |
ATGAAGCTTGTTGAGGTGGA+AGG | 0.497246 | 4.3:-50156497 | MS.gene95576:CDS |
AGTTTGAGTGGTGTATCAGC+AGG | 0.498988 | 4.3:+50155414 | None:intergenic |
CACAACAAGGTTCACGTCAC+AGG | 0.499799 | 4.3:-50156366 | MS.gene95576:CDS |
TTCCAATTATAAAACCTGTA+AGG | 0.505183 | 4.3:+50168859 | None:intergenic |
TCTCCGGATGGAGGATCAAA+AGG | 0.505297 | 4.3:+50167590 | None:intergenic |
AATTGCTCGTAGTACAGTTC+AGG | 0.508901 | 4.3:-50154932 | MS.gene95576:intron |
AACAGTGAATGTGTAAGCAT+TGG | 0.510570 | 4.3:+50167370 | None:intergenic |
ACAACAATGTAGTAGTCATT+TGG | 0.512474 | 4.3:+50156389 | None:intergenic |
GGAGATTTCACCATATTGGC+AGG | 0.513998 | 4.3:-50167572 | MS.gene95576:CDS |
GACATAGCTTCTTTGTAGTA+GGG | 0.514001 | 4.3:-50155221 | MS.gene95576:intron |
ATTGGAATTTGCAGGATGGA+TGG | 0.516169 | 4.3:-50155003 | MS.gene95576:intron |
ACCTGTTGTTTAACTCCAAG+TGG | 0.517766 | 4.3:+50168814 | None:intergenic |
CTTCAAGTAAAAGATCAGAT+TGG | 0.518189 | 4.3:-50167704 | MS.gene95576:CDS |
ACGAATTGTCCAATCTCTCC+AGG | 0.520893 | 4.3:-50167746 | MS.gene95576:CDS |
AGAGTTACTGTAATGAAGAA+TGG | 0.523401 | 4.3:+50156328 | None:intergenic |
TGCCAATATGGTGAAATCTC+CGG | 0.525221 | 4.3:+50167574 | None:intergenic |
ATATAAGTGAAGTTCTGTCC+TGG | 0.525875 | 4.3:+50167728 | None:intergenic |
TCCATCAATTTCAGAATCCA+AGG | 0.526236 | 4.3:-50156527 | MS.gene95576:CDS |
CATCTCTCGATGAATTTGCA+GGG | 0.529157 | 4.3:+50154526 | None:intergenic |
ACTTCAGTGTGGCAAGGCAG+TGG | 0.529238 | 4.3:-50154481 | MS.gene95576:CDS |
CTGCTGCCTTGTGGAATGCA+AGG | 0.530626 | 4.3:+50167660 | None:intergenic |
GACTGCACTGTACATGCCAT+TGG | 0.535391 | 4.3:-50154631 | MS.gene95576:CDS |
AAGATAACCGCCGCCACCGG+TGG | 0.541603 | 4.3:+50155335 | None:intergenic |
GTTTATCATTCCATAATGGT+AGG | 0.542317 | 4.3:+50155521 | None:intergenic |
GATGGAGGATCAAAAGGTAC+AGG | 0.546916 | 4.3:+50167596 | None:intergenic |
TATGGAGATATTTATCCACT+TGG | 0.549980 | 4.3:-50168829 | MS.gene95576:CDS |
CAGATTCCGGATATCAAATG+TGG | 0.551399 | 4.3:-50156561 | MS.gene95576:CDS |
CTTCAGTGTGGCAAGGCAGT+GGG | 0.552136 | 4.3:-50154480 | MS.gene95576:CDS |
CTGATTACTTCAAGATCCAA+GGG | 0.552515 | 4.3:-50155389 | MS.gene95576:CDS |
AGATAACCGCCGCCACCGGT+GGG | 0.552834 | 4.3:+50155336 | None:intergenic |
GTGGTTGGTCCAGCAGGAAG+AGG | 0.553379 | 4.3:+50156287 | None:intergenic |
TTATCTTCAGACTTCTGTCA+TGG | 0.553926 | 4.3:-50155319 | MS.gene95576:CDS |
CCATAATGGTAGGTTCCTTG+TGG | 0.554362 | 4.3:+50155531 | None:intergenic |
TTCCAAGTGAAAACACCCCT+TGG | 0.556437 | 4.3:+50155373 | None:intergenic |
GACCAACCACTGAAATCGAT+TGG | 0.557851 | 4.3:-50156274 | MS.gene95576:CDS |
CTGAAGATAACCGCCGCCAC+CGG | 0.560760 | 4.3:+50155332 | None:intergenic |
AGGAGGAATCTTACAGCAAG+TGG | 0.561277 | 4.3:-50155567 | MS.gene95576:CDS |
ACACTCTAAGATAAAATTGG+TGG | 0.562579 | 4.3:+50154553 | None:intergenic |
GCTGATTACTTCAAGATCCA+AGG | 0.566624 | 4.3:-50155390 | MS.gene95576:CDS |
AGGAGAAACTCATGGCAAGA+TGG | 0.567770 | 4.3:-50167779 | MS.gene95576:CDS |
CACATTCCCACATTATCCAA+TGG | 0.568508 | 4.3:+50154615 | None:intergenic |
AGTATCCCGGACAACCCCAC+CGG | 0.569660 | 4.3:-50155351 | MS.gene95576:CDS |
TGATAAATGGACAATTTCCA+GGG | 0.570857 | 4.3:-50168610 | MS.gene95576:CDS |
TGCTGCCTTGTGGAATGCAA+GGG | 0.573809 | 4.3:+50167661 | None:intergenic |
TAAGATGAAGCTTGTTGAGG+TGG | 0.574215 | 4.3:-50156501 | MS.gene95576:CDS |
CACAGGTGTATCCAAAGTCA+TGG | 0.575020 | 4.3:-50154653 | MS.gene95576:intron |
ACAATGTAGTAGTCATTTGG+TGG | 0.577035 | 4.3:+50156392 | None:intergenic |
GATTCTGAAATTGATGGATG+TGG | 0.586463 | 4.3:+50156532 | None:intergenic |
AAGTAATCAGCTAGTTTGAG+TGG | 0.592921 | 4.3:+50155402 | None:intergenic |
TCCTTCCCTTGCATTCCACA+AGG | 0.593677 | 4.3:-50167666 | MS.gene95576:CDS |
CATAACCTCCTGCTGCCTTG+TGG | 0.594177 | 4.3:+50167651 | None:intergenic |
GACCAATCGATTTCAGTGGT+TGG | 0.598810 | 4.3:+50156272 | None:intergenic |
ATGTGGGAATGTGGAATGTG+AGG | 0.600216 | 4.3:-50154605 | MS.gene95576:CDS |
ATAGGAATGGAGTGCTGCAG+AGG | 0.601936 | 4.3:-50167799 | MS.gene95576:intron |
ACAAGACTAACCAAGAAATG+AGG | 0.605612 | 4.3:+50168519 | None:intergenic |
AGATTCCGGATATCAAATGT+GGG | 0.607158 | 4.3:-50156560 | MS.gene95576:CDS |
ATGACAAGTCCATCAGGGAA+AGG | 0.607922 | 4.3:+50167407 | None:intergenic |
ACTACATTGTTGTCACAACA+AGG | 0.609823 | 4.3:-50156379 | MS.gene95576:CDS |
GGAATTTGCAGGATGGATGG+AGG | 0.610007 | 4.3:-50155000 | MS.gene95576:intron |
GATAACCGCCGCCACCGGTG+GGG | 0.610031 | 4.3:+50155337 | None:intergenic |
ATCCCGGACAACCCCACCGG+TGG | 0.615788 | 4.3:-50155348 | MS.gene95576:CDS |
AACGGACCAATCGATTTCAG+TGG | 0.617391 | 4.3:+50156268 | None:intergenic |
CAATGCACTTCAGTGTGGCA+AGG | 0.617833 | 4.3:-50154487 | MS.gene95576:CDS |
ATCTCTCGATGAATTTGCAG+GGG | 0.618315 | 4.3:+50154527 | None:intergenic |
TGCTGCAGAGGAGAAACTCA+TGG | 0.618620 | 4.3:-50167787 | MS.gene95576:CDS |
GTACATGCCATTGGATAATG+TGG | 0.618969 | 4.3:-50154622 | MS.gene95576:CDS |
GGACTTGTCATCAATGGCCG+CGG | 0.620003 | 4.3:-50167395 | MS.gene95576:CDS |
GCATTCCACAAGGCAGCAGG+AGG | 0.628336 | 4.3:-50167656 | MS.gene95576:CDS |
CATTGATGACAAGTCCATCA+GGG | 0.632768 | 4.3:+50167402 | None:intergenic |
TAGAGAGCGAGCTTGTTCAA+CGG | 0.637365 | 4.3:+50156250 | None:intergenic |
ACTAACCAAGAAATGAGGAA+AGG | 0.643027 | 4.3:+50168524 | None:intergenic |
GCATAAGATGAAGCTTGTTG+AGG | 0.650000 | 4.3:-50156504 | MS.gene95576:CDS |
TTAGTCACTGACTCAATCTG+TGG | 0.650612 | 4.3:+50168587 | None:intergenic |
ATGGTGAAATCTCCGGATGG+AGG | 0.653324 | 4.3:+50167581 | None:intergenic |
CCATCAATTTCAGAATCCAA+GGG | 0.653636 | 4.3:-50156526 | MS.gene95576:CDS |
GCAGGATGGATGGAGGACAA+TGG | 0.655581 | 4.3:-50154993 | MS.gene95576:intron |
ATGTGTAAGCATTGGAACCG+CGG | 0.655680 | 4.3:+50167378 | None:intergenic |
AAGGCAGCAGGAGGTTATGG+CGG | 0.659210 | 4.3:-50167647 | MS.gene95576:CDS |
GTATTCTGTATTGGTTACTG+CGG | 0.660650 | 4.3:-50156420 | MS.gene95576:CDS |
GTTTGAGTGGTGTATCAGCA+GGG | 0.670319 | 4.3:+50155415 | None:intergenic |
CATTGGATAATGTGGGAATG+TGG | 0.674160 | 4.3:-50154614 | MS.gene95576:CDS |
GCCTTGTGGAATGCAAGGGA+AGG | 0.677656 | 4.3:+50167665 | None:intergenic |
TCTTCAGACTTCTGTCATGG+CGG | 0.691399 | 4.3:-50155316 | MS.gene95576:CDS |
CCAAGCAATGCACTTCAGTG+TGG | 0.697000 | 4.3:-50154492 | MS.gene95576:CDS |
AATATGGTGAAATCTCCGGA+TGG | 0.697908 | 4.3:+50167578 | None:intergenic |
GATTCCGGATATCAAATGTG+GGG | 0.700602 | 4.3:-50156559 | MS.gene95576:CDS |
ACTCACTTGACATTCATTTG+GGG | 0.703591 | 4.3:-50156448 | MS.gene95576:CDS |
GGACCAAGACCAAATCCACA+AGG | 0.716812 | 4.3:-50155546 | MS.gene95576:CDS |
TACATGCCATTGGATAATGT+GGG | 0.717897 | 4.3:-50154621 | MS.gene95576:CDS |
TGATTACTTCAAGATCCAAG+GGG | 0.751364 | 4.3:-50155388 | MS.gene95576:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 50154467 | 50168953 | 50154467 | ID=MS.gene95576 |
chr4.3 | mRNA | 50154467 | 50168953 | 50154467 | ID=MS.gene95576.t1;Parent=MS.gene95576 |
chr4.3 | exon | 50168816 | 50168953 | 50168816 | ID=MS.gene95576.t1.exon1;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50168816 | 50168953 | 50168816 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
chr4.3 | exon | 50168530 | 50168639 | 50168530 | ID=MS.gene95576.t1.exon2;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50168530 | 50168639 | 50168530 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
chr4.3 | exon | 50167547 | 50167817 | 50167547 | ID=MS.gene95576.t1.exon3;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50167547 | 50167817 | 50167547 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
chr4.3 | exon | 50167363 | 50167465 | 50167363 | ID=MS.gene95576.t1.exon4;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50167363 | 50167465 | 50167363 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
chr4.3 | exon | 50156248 | 50156593 | 50156248 | ID=MS.gene95576.t1.exon5;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50156248 | 50156593 | 50156248 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
chr4.3 | exon | 50155222 | 50155587 | 50155222 | ID=MS.gene95576.t1.exon6;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50155222 | 50155587 | 50155222 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
chr4.3 | exon | 50154933 | 50155011 | 50154933 | ID=MS.gene95576.t1.exon7;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50154933 | 50155011 | 50154933 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
chr4.3 | exon | 50154467 | 50154670 | 50154467 | ID=MS.gene95576.t1.exon8;Parent=MS.gene95576.t1 |
chr4.3 | CDS | 50154467 | 50154670 | 50154467 | ID=cds.MS.gene95576.t1;Parent=MS.gene95576.t1 |
Gene Sequence |
Protein sequence |