Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95723.t1 | XP_013455499.1 | 95.4 | 307 | 13 | 1 | 1 | 307 | 1 | 306 | 1.10E-155 | 559.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95723.t1 | A0A072UUJ2 | 95.4 | 307 | 13 | 1 | 1 | 307 | 1 | 306 | 8.0e-156 | 559.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058783 | MS.gene95723 | 0.814075 | 1.85E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene95723 | 0.803298 | 3.73E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95723.t1 | MTR_4g044297 | 97.068 | 307 | 8 | 1 | 1 | 307 | 1 | 306 | 0.0 | 625 |
| MS.gene95723.t1 | MTR_2g090210 | 77.705 | 305 | 63 | 2 | 8 | 307 | 10 | 314 | 3.54e-168 | 469 |
| MS.gene95723.t1 | MTR_6g066280 | 43.925 | 321 | 117 | 5 | 35 | 301 | 12 | 323 | 3.61e-80 | 246 |
| MS.gene95723.t1 | MTR_1g077460 | 44.109 | 331 | 142 | 10 | 9 | 301 | 13 | 338 | 1.27e-72 | 228 |
| MS.gene95723.t1 | MTR_4g120990 | 38.788 | 330 | 165 | 7 | 2 | 301 | 65 | 387 | 9.18e-66 | 211 |
| MS.gene95723.t1 | MTR_1g110070 | 38.298 | 329 | 157 | 7 | 8 | 301 | 89 | 406 | 1.80e-64 | 208 |
| MS.gene95723.t1 | MTR_6g082450 | 36.571 | 350 | 158 | 8 | 3 | 307 | 67 | 397 | 1.82e-64 | 208 |
| MS.gene95723.t1 | MTR_2g035080 | 36.556 | 331 | 168 | 8 | 3 | 301 | 73 | 393 | 3.08e-56 | 187 |
| MS.gene95723.t1 | MTR_1g087830 | 36.328 | 256 | 119 | 7 | 48 | 302 | 88 | 300 | 5.77e-48 | 163 |
| MS.gene95723.t1 | MTR_1g087810 | 35.424 | 271 | 130 | 8 | 41 | 307 | 83 | 312 | 1.32e-42 | 149 |
| MS.gene95723.t1 | MTR_6g044130 | 44.444 | 126 | 52 | 5 | 180 | 287 | 1 | 126 | 4.42e-20 | 84.7 |
| MS.gene95723.t1 | MTR_6g077930 | 28.253 | 269 | 114 | 11 | 40 | 265 | 812 | 1044 | 1.99e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95723.t1 | AT4G03420 | 69.868 | 302 | 88 | 2 | 8 | 306 | 7 | 308 | 2.74e-144 | 409 |
| MS.gene95723.t1 | AT1G03610 | 65.894 | 302 | 90 | 4 | 7 | 304 | 10 | 302 | 5.50e-138 | 392 |
| MS.gene95723.t1 | AT4G28150 | 58.224 | 304 | 86 | 6 | 1 | 295 | 1 | 272 | 6.31e-113 | 328 |
| MS.gene95723.t1 | AT4G28150 | 58.224 | 304 | 84 | 7 | 1 | 295 | 1 | 270 | 6.45e-111 | 323 |
| MS.gene95723.t1 | AT1G03610 | 68.421 | 228 | 60 | 3 | 7 | 230 | 10 | 229 | 7.11e-106 | 309 |
| MS.gene95723.t1 | AT1G73210 | 50.158 | 317 | 126 | 7 | 3 | 302 | 7 | 308 | 9.23e-94 | 280 |
| MS.gene95723.t1 | AT1G73210 | 49.842 | 317 | 129 | 7 | 3 | 302 | 7 | 310 | 1.73e-93 | 280 |
| MS.gene95723.t1 | AT1G73210 | 49.842 | 317 | 129 | 7 | 3 | 302 | 7 | 310 | 1.73e-93 | 280 |
| MS.gene95723.t1 | AT1G17830 | 50.311 | 322 | 134 | 9 | 3 | 301 | 13 | 331 | 1.73e-92 | 278 |
| MS.gene95723.t1 | AT4G28150 | 57.282 | 206 | 64 | 4 | 1 | 197 | 1 | 191 | 4.19e-70 | 216 |
| MS.gene95723.t1 | AT2G01260 | 40.317 | 315 | 159 | 7 | 6 | 301 | 62 | 366 | 9.54e-63 | 203 |
| MS.gene95723.t1 | AT1G15030 | 38.629 | 321 | 170 | 7 | 3 | 301 | 42 | 357 | 1.86e-61 | 199 |
| MS.gene95723.t1 | AT5G49220 | 37.821 | 312 | 171 | 6 | 2 | 301 | 101 | 401 | 8.30e-61 | 199 |
| MS.gene95723.t1 | AT4G16100 | 38.762 | 307 | 167 | 7 | 9 | 302 | 88 | 386 | 1.93e-58 | 192 |
| MS.gene95723.t1 | AT2G01260 | 41.250 | 240 | 115 | 5 | 6 | 226 | 62 | 294 | 6.63e-48 | 163 |
| MS.gene95723.t1 | AT1G15030 | 40.486 | 247 | 121 | 6 | 3 | 227 | 42 | 284 | 8.20e-48 | 162 |
| MS.gene95723.t1 | AT5G23380 | 36.129 | 310 | 161 | 8 | 7 | 302 | 6 | 292 | 3.63e-41 | 145 |
| MS.gene95723.t1 | AT5G23380 | 36.522 | 230 | 119 | 5 | 7 | 226 | 6 | 218 | 1.05e-28 | 110 |
| MS.gene95723.t1 | AT5G23380 | 36.522 | 230 | 119 | 5 | 7 | 226 | 6 | 218 | 1.05e-28 | 110 |
| MS.gene95723.t1 | AT2G01260 | 36.066 | 183 | 91 | 6 | 6 | 169 | 62 | 237 | 4.76e-22 | 93.2 |
| MS.gene95723.t1 | AT5G08360 | 34.395 | 157 | 86 | 4 | 148 | 303 | 26 | 166 | 1.33e-18 | 82.4 |
| MS.gene95723.t1 | AT5G08360 | 32.593 | 135 | 75 | 3 | 169 | 303 | 3 | 121 | 4.09e-14 | 68.9 |
Find 77 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGAAACCTTAACCGTTTA+TGG | 0.049207 | 4.1:+54937267 | MS.gene95723:CDS |
| GTCCCTCCCTTTCAGATTAA+TGG | 0.178578 | 4.1:+54939431 | MS.gene95723:intron |
| ATTTCACTCTGAGTGATCTT+TGG | 0.265625 | 4.1:+54937318 | MS.gene95723:CDS |
| TTCAGAGAAGAGATTGATTC+TGG | 0.274830 | 4.1:+54937558 | MS.gene95723:intron |
| TATTTACAAGCAATAATTTC+AGG | 0.321189 | 4.1:+54937447 | MS.gene95723:CDS |
| AAATTTACCTTATCAATTAG+AGG | 0.328507 | 4.1:-54937759 | None:intergenic |
| TTTGGAATTGTTTCGATGAA+TGG | 0.331760 | 4.1:+54937336 | MS.gene95723:CDS |
| CCCATGGGAATATGATATAT+CGG | 0.340823 | 4.1:-54939744 | None:intergenic |
| TCCCTCCCTTTCAGATTAAT+GGG | 0.345433 | 4.1:+54939432 | MS.gene95723:intron |
| ACACTTTCATCTTCATTTCA+AGG | 0.353986 | 4.1:+54939810 | MS.gene95723:CDS |
| TCATGACTTTAATTACTTCA+TGG | 0.353997 | 4.1:+54940946 | MS.gene95723:CDS |
| GGCATCTCATTGCAACCATT+TGG | 0.391055 | 4.1:+54940800 | MS.gene95723:CDS |
| CAAGGGAATTTGTGGGGCTC+TGG | 0.401556 | 4.1:+54940842 | MS.gene95723:CDS |
| GCAACTGCCATCCAACTTGC+TGG | 0.415630 | 4.1:-54939506 | None:intergenic |
| ACCATCTAAGTTTCTACAAA+AGG | 0.419530 | 4.1:+54937138 | MS.gene95723:CDS |
| TTCATGGTTGAAGCAACTTA+AGG | 0.420063 | 4.1:+54940916 | MS.gene95723:CDS |
| TATCACACGGATTCCATAAA+CGG | 0.423998 | 4.1:-54937280 | None:intergenic |
| TTAATTACTTCATGGGCATT+CGG | 0.424039 | 4.1:+54940954 | MS.gene95723:CDS |
| CATGACTTTAATTACTTCAT+GGG | 0.433693 | 4.1:+54940947 | MS.gene95723:CDS |
| ACGGATTCCATAAACGGTTA+AGG | 0.435111 | 4.1:-54937274 | None:intergenic |
| CAATGAGGTCAATGCAATCT+AGG | 0.444961 | 4.1:+54937074 | None:intergenic |
| ATTAGAGGAACTCTTCCATA+TGG | 0.461032 | 4.1:-54937744 | None:intergenic |
| ATCTTTAATTGTTCTTCCCA+TGG | 0.468483 | 4.1:-54939760 | None:intergenic |
| CTGGCATTTGAATGACCGAT+TGG | 0.470292 | 4.1:+54937686 | MS.gene95723:CDS |
| ACAAGATGCAAGGGAATTTG+TGG | 0.474690 | 4.1:+54940834 | MS.gene95723:CDS |
| AAGAGTTCCTCTAATTGATA+AGG | 0.483084 | 4.1:+54937752 | MS.gene95723:CDS |
| CCATGGGAATATGATATATC+GGG | 0.486988 | 4.1:-54939743 | None:intergenic |
| TATGTAGTGTGGCAGATTCA+TGG | 0.496401 | 4.1:+54940900 | MS.gene95723:CDS |
| GGGTTAGCAGAAAGATCCCC+AGG | 0.501865 | 4.1:+54939452 | MS.gene95723:CDS |
| ATTTGAATTGCAGAGAGGTA+AGG | 0.504614 | 4.1:-54937425 | None:intergenic |
| AGAAACTTAGATGGTACAAC+AGG | 0.506246 | 4.1:-54937130 | None:intergenic |
| CAAGTTGGATGGCAGTTGCT+TGG | 0.508186 | 4.1:+54939510 | MS.gene95723:CDS |
| TGGAAGAGACTCAAGAGAAA+AGG | 0.512210 | 4.1:+54940765 | MS.gene95723:CDS |
| TCTTTAATTGTTCTTCCCAT+GGG | 0.512415 | 4.1:-54939759 | None:intergenic |
| CAAGATGCAAGGGAATTTGT+GGG | 0.517532 | 4.1:+54940835 | MS.gene95723:CDS |
| CATCTGAGCAAGATAGTCTC+TGG | 0.520611 | 4.1:+54937667 | MS.gene95723:CDS |
| TTGATCTTTCACCAGCAAGT+TGG | 0.526084 | 4.1:+54939495 | MS.gene95723:CDS |
| TGGCATTTGAATGACCGATT+GGG | 0.527348 | 4.1:+54937687 | MS.gene95723:CDS |
| TCTCTTCCATCTCATTATCA+AGG | 0.529957 | 4.1:-54940751 | None:intergenic |
| TATGGTGAAGAAAGCAATCA+AGG | 0.530917 | 4.1:-54937102 | None:intergenic |
| TTGTACGTGGCTAAACCAAA+TGG | 0.531561 | 4.1:-54940815 | None:intergenic |
| AGAGGTAAGGAACATAGTAT+TGG | 0.534665 | 4.1:-54937412 | None:intergenic |
| TGGTAGGGACCAAGAAAAGC+TGG | 0.539606 | 4.1:+54940871 | MS.gene95723:CDS |
| CCCGATATATCATATTCCCA+TGG | 0.539980 | 4.1:+54939743 | MS.gene95723:CDS |
| GGAAATAAAGATGACCCAAT+CGG | 0.546064 | 4.1:-54937701 | None:intergenic |
| TTCGATGAATGGAGTGCCTA+TGG | 0.551127 | 4.1:+54937347 | MS.gene95723:CDS |
| ATAGCGAGTGTGATAAGCTA+TGG | 0.557766 | 4.1:+54937625 | MS.gene95723:CDS |
| ATGGTACAACAGGTGTTGTA+TGG | 0.559797 | 4.1:-54937120 | None:intergenic |
| TACTTCATGGGCATTCGGCA+TGG | 0.562500 | 4.1:+54940959 | MS.gene95723:CDS |
| TGAAGTAATTAAAGTCATGA+TGG | 0.564712 | 4.1:-54940943 | None:intergenic |
| GATTGGAACTCCAACGCCAT+AGG | 0.589508 | 4.1:-54937363 | None:intergenic |
| GAATGGAGTGCCTATGGCGT+TGG | 0.591581 | 4.1:+54937353 | MS.gene95723:CDS |
| ACTCAAGAGAAAAGGAAGGA+AGG | 0.593264 | 4.1:+54940773 | MS.gene95723:CDS |
| GGGGCTCTGGAAAATGTGGT+AGG | 0.593911 | 4.1:+54940855 | MS.gene95723:CDS |
| CTATGGACATCATCAGAAGA+GGG | 0.597455 | 4.1:+54937642 | MS.gene95723:CDS |
| TATGGACCTTGATAATGAGA+TGG | 0.597757 | 4.1:+54940745 | MS.gene95723:CDS |
| CCGATATATCATATTCCCAT+GGG | 0.601439 | 4.1:+54939744 | MS.gene95723:CDS |
| GGGCTCTGGAAAATGTGGTA+GGG | 0.603737 | 4.1:+54940856 | MS.gene95723:CDS |
| TTAGCCACGTACAAGATGCA+AGG | 0.611061 | 4.1:+54940824 | MS.gene95723:CDS |
| AGTAATTAAAGTCATGATGG+TGG | 0.611478 | 4.1:-54940940 | None:intergenic |
| ATGAAAGTGTGTGGTAAGTG+AGG | 0.614288 | 4.1:-54939797 | None:intergenic |
| TCTTTCACCAGCAAGTTGGA+TGG | 0.614478 | 4.1:+54939499 | MS.gene95723:CDS |
| GCTATGGACATCATCAGAAG+AGG | 0.617480 | 4.1:+54937641 | MS.gene95723:CDS |
| TCAACTGTTTCTCTATCACA+CGG | 0.620809 | 4.1:-54937293 | None:intergenic |
| ATTCCCTTGCATCTTGTACG+TGG | 0.626371 | 4.1:-54940828 | None:intergenic |
| AGAGACTCAAGAGAAAAGGA+AGG | 0.627266 | 4.1:+54940769 | MS.gene95723:CDS |
| GAGAAAAGGAAGGAAGGTGA+AGG | 0.630280 | 4.1:+54940779 | MS.gene95723:CDS |
| TTCTGGTGATAGTGAGACAA+GGG | 0.640927 | 4.1:+54937575 | MS.gene95723:CDS |
| TAGCCACGTACAAGATGCAA+GGG | 0.647629 | 4.1:+54940825 | MS.gene95723:CDS |
| TAAATATTTGAATTGCAGAG+AGG | 0.649675 | 4.1:-54937430 | None:intergenic |
| TTGTGGGGCTCTGGAAAATG+TGG | 0.652498 | 4.1:+54940851 | MS.gene95723:CDS |
| GCTGGTTTCACTATGTAGTG+TGG | 0.665797 | 4.1:+54940889 | MS.gene95723:CDS |
| ATTCTGGTGATAGTGAGACA+AGG | 0.671618 | 4.1:+54937574 | MS.gene95723:CDS |
| AAGATGCAAGGGAATTTGTG+GGG | 0.694545 | 4.1:+54940836 | MS.gene95723:CDS |
| GGTTAGCAGAAAGATCCCCA+GGG | 0.722239 | 4.1:+54939453 | MS.gene95723:CDS |
| GAAATGAAGATGAAAGTGTG+TGG | 0.729995 | 4.1:-54939806 | None:intergenic |
| TTTAAGTGACATCAACCCTG+GGG | 0.735285 | 4.1:-54939468 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTCATTTTTTAATAG+GGG | + | chr4.1:54940436-54940455 | MS.gene95723:intron | 10.0% |
| !!! | AATTTTCATTTCTTTTATTA+AGG | - | chr4.1:54940219-54940238 | None:intergenic | 10.0% |
| !!! | ATTTTCATTTCTTTTATTAA+GGG | - | chr4.1:54940218-54940237 | None:intergenic | 10.0% |
| !!! | CAAAATTTTCATTTTTTAAT+AGG | + | chr4.1:54940434-54940453 | MS.gene95723:intron | 10.0% |
| !!! | CATTAAAAGTTTTTTTTTTT+AGG | - | chr4.1:54940024-54940043 | None:intergenic | 10.0% |
| !!! | TTATTTTATCTTTTTTTTCT+GGG | + | chr4.1:54938105-54938124 | MS.gene95723:intron | 10.0% |
| !!! | TTTATTTTATCTTTTTTTTC+TGG | + | chr4.1:54938104-54938123 | MS.gene95723:intron | 10.0% |
| !! | AAAAGTTAATCACTTAAAAT+TGG | + | chr4.1:54939075-54939094 | MS.gene95723:intron | 15.0% |
| !! | AATAATTATTACGAGATAAA+AGG | - | chr4.1:54939957-54939976 | None:intergenic | 15.0% |
| !! | AGAAACATGTAATTAAAAAA+TGG | - | chr4.1:54937849-54937868 | None:intergenic | 15.0% |
| !! | AGTCCATAATAAAATAAAAT+AGG | - | chr4.1:54938698-54938717 | None:intergenic | 15.0% |
| !! | ATTTAAATTTATAAGGTAAG+AGG | + | chr4.1:54939005-54939024 | MS.gene95723:intron | 15.0% |
| !! | CACAAATTATGAAAAAAATA+AGG | - | chr4.1:54940510-54940529 | None:intergenic | 15.0% |
| !! | CATAATAAAATAAAATAGGT+GGG | - | chr4.1:54938694-54938713 | None:intergenic | 15.0% |
| !! | GTTAACATTATAATATTTCA+AGG | + | chr4.1:54938214-54938233 | MS.gene95723:intron | 15.0% |
| !! | TTAAAAATAGGGAATATAAT+AGG | + | chr4.1:54938241-54938260 | MS.gene95723:intron | 15.0% |
| !! | TTGAAAAAATCAATCTAATT+TGG | - | chr4.1:54938795-54938814 | None:intergenic | 15.0% |
| !!! | AAATTTTTAATCTATGGATT+AGG | + | chr4.1:54937907-54937926 | MS.gene95723:intron | 15.0% |
| !!! | AGTGAATTTCATTTTAATAA+AGG | + | chr4.1:54939034-54939053 | MS.gene95723:intron | 15.0% |
| !!! | ATTGCAACATTTTAAAATTT+AGG | + | chr4.1:54940464-54940483 | MS.gene95723:intron | 15.0% |
| !!! | ATTTTTACTAATAGAATCAA+CGG | - | chr4.1:54939370-54939389 | None:intergenic | 15.0% |
| !!! | CATTTTTCTTTAATTAGTAA+AGG | + | chr4.1:54939591-54939610 | MS.gene95723:intron | 15.0% |
| !!! | TATTATATTCCCTATTTTTA+AGG | - | chr4.1:54938242-54938261 | None:intergenic | 15.0% |
| !!! | TCCTTTTATTCATTATTTTT+TGG | + | chr4.1:54940143-54940162 | MS.gene95723:intron | 15.0% |
| !!! | TTAATTAGTAAAGGTATAAA+TGG | + | chr4.1:54939600-54939619 | MS.gene95723:intron | 15.0% |
| !!! | TTTTCATTTCTTTTATTAAG+GGG | - | chr4.1:54940217-54940236 | None:intergenic | 15.0% |
| !!! | TTTTTTATTTTTCAAACACT+CGG | - | chr4.1:54938931-54938950 | None:intergenic | 15.0% |
| !! | AAAGAACTTGAGATTTAAAT+CGG | + | chr4.1:54938449-54938468 | MS.gene95723:intron | 20.0% |
| !! | AAATTTACCTTATCAATTAG+AGG | - | chr4.1:54937762-54937781 | None:intergenic | 20.0% |
| !! | AATTAGTATAAGTTATACCA+AGG | - | chr4.1:54939551-54939570 | None:intergenic | 20.0% |
| !! | AGTAAACCAAAAAACAAAAA+AGG | - | chr4.1:54937191-54937210 | None:intergenic | 20.0% |
| !! | ATCCCTTATAGTATTAAAAT+TGG | + | chr4.1:54939905-54939924 | MS.gene95723:intron | 20.0% |
| !! | CAATGAAAATTACAAAGATA+AGG | - | chr4.1:54938612-54938631 | None:intergenic | 20.0% |
| !! | CCATAATAAAATAAAATAGG+TGG | - | chr4.1:54938695-54938714 | None:intergenic | 20.0% |
| !! | CTAGACAATAATTTAAGTAA+AGG | - | chr4.1:54938669-54938688 | None:intergenic | 20.0% |
| !! | CTTTACTTAAATTATTGTCT+AGG | + | chr4.1:54938667-54938686 | MS.gene95723:intron | 20.0% |
| !! | GCCAAAAAATAATGAATAAA+AGG | - | chr4.1:54940147-54940166 | None:intergenic | 20.0% |
| !! | GTATTTAGAAAAAAGATGTT+TGG | + | chr4.1:54938192-54938211 | MS.gene95723:intron | 20.0% |
| !! | GTGTTTGAAAAATAAAAAAG+AGG | + | chr4.1:54938932-54938951 | MS.gene95723:intron | 20.0% |
| !! | TAAATGGTTAAATTAGCATT+TGG | + | chr4.1:54939616-54939635 | MS.gene95723:intron | 20.0% |
| !! | TATGATAGTAAATAGATCAA+TGG | + | chr4.1:54940083-54940102 | MS.gene95723:intron | 20.0% |
| !! | TATTTACAAGCAATAATTTC+AGG | + | chr4.1:54937447-54937466 | MS.gene95723:CDS | 20.0% |
| !!! | AAGATAGGAATTTTATTCTA+AGG | + | chr4.1:54938170-54938189 | MS.gene95723:intron | 20.0% |
| !!! | AAGATTTTAAGCACTAATTT+AGG | + | chr4.1:54939316-54939335 | MS.gene95723:intron | 20.0% |
| !!! | AGTAGGAAATTTTTAATCTA+TGG | + | chr4.1:54937901-54937920 | MS.gene95723:intron | 20.0% |
| !!! | ATGTACTAAATTTTCATGTT+TGG | + | chr4.1:54939652-54939671 | MS.gene95723:intron | 20.0% |
| !!! | CAACTTTTTGTAAAGATAAA+AGG | + | chr4.1:54940315-54940334 | MS.gene95723:intron | 20.0% |
| !!! | CATTGTTTTGTAAAATTAAG+GGG | - | chr4.1:54940245-54940264 | None:intergenic | 20.0% |
| !!! | CCACCTATTTTATTTTATTA+TGG | + | chr4.1:54938692-54938711 | MS.gene95723:intron | 20.0% |
| !!! | GATATATTTTCAATCAAATC+GGG | + | chr4.1:54938842-54938861 | MS.gene95723:intron | 20.0% |
| !!! | GCATTGTTTTGTAAAATTAA+GGG | - | chr4.1:54940246-54940265 | None:intergenic | 20.0% |
| !!! | GGATATATTTTCAATCAAAT+CGG | + | chr4.1:54938841-54938860 | MS.gene95723:intron | 20.0% |
| !!! | GTCCAATTTTAATACTATAA+GGG | - | chr4.1:54939910-54939929 | None:intergenic | 20.0% |
| !!! | TCTTTGTAATTTTCATTGAT+TGG | + | chr4.1:54938614-54938633 | MS.gene95723:intron | 20.0% |
| !!! | TGCATTGTTTTGTAAAATTA+AGG | - | chr4.1:54940247-54940266 | None:intergenic | 20.0% |
| !!! | TTTACAAAAAGTTGCAATTT+TGG | - | chr4.1:54940309-54940328 | None:intergenic | 20.0% |
| !!! | TTTCTTCCTTTTTTGTTTTT+TGG | + | chr4.1:54937182-54937201 | MS.gene95723:intron | 20.0% |
| ! | AACAAAAAAGGAAGAAAGAA+TGG | - | chr4.1:54937179-54937198 | None:intergenic | 25.0% |
| ! | AATAAGTGCAAAAAGCTAAT+AGG | - | chr4.1:54940675-54940694 | None:intergenic | 25.0% |
| ! | ACAAAAACATCACTATTTGT+TGG | + | chr4.1:54938742-54938761 | MS.gene95723:intron | 25.0% |
| ! | AGTGTATCAAATTTATTCCT+AGG | + | chr4.1:54938141-54938160 | MS.gene95723:intron | 25.0% |
| ! | AGTTCTTTACTTGTTTACTT+AGG | - | chr4.1:54938437-54938456 | None:intergenic | 25.0% |
| ! | ATTCCTAGGAATATAAAGAT+AGG | + | chr4.1:54938155-54938174 | MS.gene95723:intron | 25.0% |
| ! | ATTCCTATCTTTATATTCCT+AGG | - | chr4.1:54938161-54938180 | None:intergenic | 25.0% |
| ! | CAAAAACATCACTATTTGTT+GGG | + | chr4.1:54938743-54938762 | MS.gene95723:intron | 25.0% |
| ! | CAGGAAAAAAAATTTAAGAG+TGG | - | chr4.1:54940059-54940078 | None:intergenic | 25.0% |
| ! | CATGACTTTAATTACTTCAT+GGG | + | chr4.1:54940947-54940966 | MS.gene95723:CDS | 25.0% |
| ! | CTATTTACTATCATAAACAC+AGG | - | chr4.1:54940078-54940097 | None:intergenic | 25.0% |
| ! | CTTATTTCCCTAAAGATAAA+GGG | + | chr4.1:54940347-54940366 | MS.gene95723:intron | 25.0% |
| ! | GGTAATTAATTTCTATTCCT+TGG | + | chr4.1:54939531-54939550 | MS.gene95723:intron | 25.0% |
| ! | GTACAAAGTGACAATTTATT+AGG | - | chr4.1:54938020-54938039 | None:intergenic | 25.0% |
| ! | GTTCTTTACTTGTTTACTTA+GGG | - | chr4.1:54938436-54938455 | None:intergenic | 25.0% |
| ! | TAAATATTTGAATTGCAGAG+AGG | - | chr4.1:54937433-54937452 | None:intergenic | 25.0% |
| ! | TCATGACTTTAATTACTTCA+TGG | + | chr4.1:54940946-54940965 | MS.gene95723:CDS | 25.0% |
| ! | TGAAGTAATTAAAGTCATGA+TGG | - | chr4.1:54940946-54940965 | None:intergenic | 25.0% |
| ! | TTCAAGGAACCTTAAAAATA+GGG | + | chr4.1:54938230-54938249 | MS.gene95723:intron | 25.0% |
| ! | TTTCAAGGAACCTTAAAAAT+AGG | + | chr4.1:54938229-54938248 | MS.gene95723:intron | 25.0% |
| ! | TTTGAAAAATCAACTCCATA+TGG | + | chr4.1:54937729-54937748 | MS.gene95723:CDS | 25.0% |
| !! | AAAAGTTTTCCCAAAGAAAA+TGG | - | chr4.1:54938294-54938313 | None:intergenic | 25.0% |
| !! | AATTTTGTCCTCTATCTTTA+AGG | - | chr4.1:54940421-54940440 | None:intergenic | 25.0% |
| !! | ACTTTTAACCCTTTATCTTT+AGG | - | chr4.1:54940358-54940377 | None:intergenic | 25.0% |
| !! | CTTTTAACCCTTTATCTTTA+GGG | - | chr4.1:54940357-54940376 | None:intergenic | 25.0% |
| !! | TCCAATCAACTTTAAAAATG+AGG | + | chr4.1:54937379-54937398 | MS.gene95723:CDS | 25.0% |
| !!! | CATTGTTTTTTTCACAGTTT+TGG | - | chr4.1:54938902-54938921 | None:intergenic | 25.0% |
| !!! | GAGTTGATTTTTCAAAATAC+TGG | - | chr4.1:54937725-54937744 | None:intergenic | 25.0% |
| !!! | GCAACATTTTAAAATTTAGG+AGG | + | chr4.1:54940467-54940486 | MS.gene95723:intron | 25.0% |
| !!! | GGTCCAATTTTAATACTATA+AGG | - | chr4.1:54939911-54939930 | None:intergenic | 25.0% |
| !!! | TACTCATGGTTGATATTTTT+AGG | + | chr4.1:54939718-54939737 | MS.gene95723:intron | 25.0% |
| !!! | TATTAGCTTTTTGCACTTAT+TGG | + | chr4.1:54940674-54940693 | MS.gene95723:intron | 25.0% |
| !!! | TCCTCATTTTTAAAGTTGAT+TGG | - | chr4.1:54937383-54937402 | None:intergenic | 25.0% |
| AAATATATCCACGAAACTGA+TGG | - | chr4.1:54938831-54938850 | None:intergenic | 30.0% | |
| AAGAGTTCCTCTAATTGATA+AGG | + | chr4.1:54937752-54937771 | MS.gene95723:CDS | 30.0% | |
| ACACTTTCATCTTCATTTCA+AGG | + | chr4.1:54939810-54939829 | MS.gene95723:CDS | 30.0% | |
| ACATGTTTCCTTAAAGATAG+AGG | + | chr4.1:54940410-54940429 | MS.gene95723:intron | 30.0% | |
| ACCATCTAAGTTTCTACAAA+AGG | + | chr4.1:54937138-54937157 | MS.gene95723:CDS | 30.0% | |
| ACTGTGAAAAAAACAATGTG+AGG | + | chr4.1:54938904-54938923 | MS.gene95723:intron | 30.0% | |
| AGAGATAAGAACATAAGACT+AGG | - | chr4.1:54938042-54938061 | None:intergenic | 30.0% | |
| AGGTATTCCTTATACATGTT+TGG | + | chr4.1:54939830-54939849 | MS.gene95723:intron | 30.0% | |
| AGTAATTAAAGTCATGATGG+TGG | - | chr4.1:54940943-54940962 | None:intergenic | 30.0% | |
| ATCTTTAATTGTTCTTCCCA+TGG | - | chr4.1:54939763-54939782 | None:intergenic | 30.0% | |
| CGCTATACTGTGAATTTATT+TGG | - | chr4.1:54939144-54939163 | None:intergenic | 30.0% | |
| CTTTGTAATGCAAGTTTGTA+AGG | + | chr4.1:54939166-54939185 | MS.gene95723:intron | 30.0% | |
| GATCAATTGATCAATACTCA+TGG | + | chr4.1:54939704-54939723 | MS.gene95723:intron | 30.0% | |
| GCTTATTTCCCTAAAGATAA+AGG | + | chr4.1:54940346-54940365 | MS.gene95723:intron | 30.0% | |
| GTAGAAATGTTATCTTGTGA+TGG | + | chr4.1:54939243-54939262 | MS.gene95723:intron | 30.0% | |
| GTTCTTATCTCTTTCTTAAG+TGG | + | chr4.1:54938050-54938069 | MS.gene95723:intron | 30.0% | |
| TAGCTTAATCAACATATGAC+TGG | - | chr4.1:54939932-54939951 | None:intergenic | 30.0% | |
| TATGAAGGATTGTGTAGATA+TGG | + | chr4.1:54940727-54940746 | MS.gene95723:intron | 30.0% | |
| TCAAGCATTCATGTAGTAAT+GGG | + | chr4.1:54939878-54939897 | MS.gene95723:intron | 30.0% | |
| TCAATTCGATTATCATCCAA+AGG | + | chr4.1:54940574-54940593 | MS.gene95723:intron | 30.0% | |
| TCCAATTCCAAACATGTATA+AGG | - | chr4.1:54939840-54939859 | None:intergenic | 30.0% | |
| TCTTTAATTGTTCTTCCCAT+GGG | - | chr4.1:54939762-54939781 | None:intergenic | 30.0% | |
| TGATTCTATGGTTGACAAAT+TGG | + | chr4.1:54939409-54939428 | MS.gene95723:intron | 30.0% | |
| TGGTAGTTGTACATAAATGT+AGG | - | chr4.1:54940650-54940669 | None:intergenic | 30.0% | |
| TTAATTACTTCATGGGCATT+CGG | + | chr4.1:54940954-54940973 | MS.gene95723:CDS | 30.0% | |
| TTAGAAACCTTAACCGTTTA+TGG | + | chr4.1:54937267-54937286 | MS.gene95723:CDS | 30.0% | |
| TTTGTCAACCATAGAATCAA+CGG | - | chr4.1:54939408-54939427 | None:intergenic | 30.0% | |
| ! | AAACCAAACAGCAAAAGTTT+TGG | - | chr4.1:54938584-54938603 | None:intergenic | 30.0% |
| ! | ACCTTTTGTAGAAACTTAGA+TGG | - | chr4.1:54937142-54937161 | None:intergenic | 30.0% |
| ! | ATTTTTCCCACCATTTTCTT+TGG | + | chr4.1:54938281-54938300 | MS.gene95723:intron | 30.0% |
| ! | GTTTCAAAATGTTGCGATTT+TGG | + | chr4.1:54940191-54940210 | MS.gene95723:intron | 30.0% |
| ! | TCCTTATACATGTTTGGAAT+TGG | + | chr4.1:54939836-54939855 | MS.gene95723:intron | 30.0% |
| ! | TTTGGAATTGTTTCGATGAA+TGG | + | chr4.1:54937336-54937355 | MS.gene95723:CDS | 30.0% |
| ! | TTTTTCCCACCATTTTCTTT+GGG | + | chr4.1:54938282-54938301 | MS.gene95723:intron | 30.0% |
| !! | CTTTTGACTCTCTAACTTTA+TGG | - | chr4.1:54940389-54940408 | None:intergenic | 30.0% |
| !!! | AAAACTTTTGCTGTTTGGTT+TGG | + | chr4.1:54938583-54938602 | MS.gene95723:intron | 30.0% |
| !!! | ATCGCAACATTTTGAAACTA+AGG | - | chr4.1:54940189-54940208 | None:intergenic | 30.0% |
| !!! | TCGCAACATTTTGAAACTAA+GGG | - | chr4.1:54940188-54940207 | None:intergenic | 30.0% |
| AAGATGAGAGTCCATAGATT+AGG | + | chr4.1:54937872-54937891 | MS.gene95723:intron | 35.0% | |
| AATCATGAGAACTAGACCTT+TGG | - | chr4.1:54940593-54940612 | None:intergenic | 35.0% | |
| AATGCAAGTTTGTAAGGTGT+TGG | + | chr4.1:54939172-54939191 | MS.gene95723:intron | 35.0% | |
| ACGTTTGTCTTGTACATTGT+AGG | - | chr4.1:54939225-54939244 | None:intergenic | 35.0% | |
| AGAAACTTAGATGGTACAAC+AGG | - | chr4.1:54937133-54937152 | None:intergenic | 35.0% | |
| AGAGGTAAGGAACATAGTAT+TGG | - | chr4.1:54937415-54937434 | None:intergenic | 35.0% | |
| ATTAGAGGAACTCTTCCATA+TGG | - | chr4.1:54937747-54937766 | None:intergenic | 35.0% | |
| ATTTCACTCTGAGTGATCTT+TGG | + | chr4.1:54937318-54937337 | MS.gene95723:CDS | 35.0% | |
| ATTTGAATTGCAGAGAGGTA+AGG | - | chr4.1:54937428-54937447 | None:intergenic | 35.0% | |
| CCATGGGAATATGATATATC+GGG | - | chr4.1:54939746-54939765 | None:intergenic | 35.0% | |
| CCCATGGGAATATGATATAT+CGG | - | chr4.1:54939747-54939766 | None:intergenic | 35.0% | |
| CCGATATATCATATTCCCAT+GGG | + | chr4.1:54939744-54939763 | MS.gene95723:CDS | 35.0% | |
| GCTAACCCATTAATCTGAAA+GGG | - | chr4.1:54939440-54939459 | None:intergenic | 35.0% | |
| GGAAATAAAGATGACCCAAT+CGG | - | chr4.1:54937704-54937723 | None:intergenic | 35.0% | |
| GTCAAGCATTCATGTAGTAA+TGG | + | chr4.1:54939877-54939896 | MS.gene95723:intron | 35.0% | |
| TATCACACGGATTCCATAAA+CGG | - | chr4.1:54937283-54937302 | None:intergenic | 35.0% | |
| TATGGTGAAGAAAGCAATCA+AGG | - | chr4.1:54937105-54937124 | None:intergenic | 35.0% | |
| TCGATCATTGTTATGCAACA+AGG | + | chr4.1:54940536-54940555 | MS.gene95723:intron | 35.0% | |
| TCTCTTCCATCTCATTATCA+AGG | - | chr4.1:54940754-54940773 | None:intergenic | 35.0% | |
| TGCTAACCCATTAATCTGAA+AGG | - | chr4.1:54939441-54939460 | None:intergenic | 35.0% | |
| TTCATGGTTGAAGCAACTTA+AGG | + | chr4.1:54940916-54940935 | MS.gene95723:CDS | 35.0% | |
| ! | AGTTTTCCCAAAGAAAATGG+TGG | - | chr4.1:54938291-54938310 | None:intergenic | 35.0% |
| ! | ATAGTGAAACCAGCTTTTCT+TGG | - | chr4.1:54940883-54940902 | None:intergenic | 35.0% |
| ! | ATTCCCACGAACATTTTACA+CGG | + | chr4.1:54938316-54938335 | MS.gene95723:intron | 35.0% |
| ! | CACAGAAGAAAAAGTGCATT+TGG | - | chr4.1:54937500-54937519 | None:intergenic | 35.0% |
| ! | GAAATGAAGATGAAAGTGTG+TGG | - | chr4.1:54939809-54939828 | None:intergenic | 35.0% |
| ! | GTTTTCCCAAAGAAAATGGT+GGG | - | chr4.1:54938290-54938309 | None:intergenic | 35.0% |
| ! | TCAACTGTTTCTCTATCACA+CGG | - | chr4.1:54937296-54937315 | None:intergenic | 35.0% |
| ! | TTCAGAGAAGAGATTGATTC+TGG | + | chr4.1:54937558-54937577 | MS.gene95723:intron | 35.0% |
| !! | TATGGACCTTGATAATGAGA+TGG | + | chr4.1:54940745-54940764 | MS.gene95723:CDS | 35.0% |
| !! | TTTTAAGTGACATCAACCCT+GGG | - | chr4.1:54939472-54939491 | None:intergenic | 35.0% |
| !!! | CAAACAGCAAAAGTTTTGGA+AGG | - | chr4.1:54938580-54938599 | None:intergenic | 35.0% |
| !!! | CGCAACATTTTGAAACTAAG+GGG | - | chr4.1:54940187-54940206 | None:intergenic | 35.0% |
| !!! | CTTCCAAAACTTTTGCTGTT+TGG | + | chr4.1:54938578-54938597 | MS.gene95723:intron | 35.0% |
| !!! | GCAACATTTTGAAACTAAGG+GGG | - | chr4.1:54940186-54940205 | None:intergenic | 35.0% |
| !!! | GCACTTTTTCTTCTGTGATA+CGG | + | chr4.1:54937503-54937522 | MS.gene95723:intron | 35.0% |
| AACCCATTAATCTGAAAGGG+AGG | - | chr4.1:54939437-54939456 | None:intergenic | 40.0% | |
| AAGATGCAAGGGAATTTGTG+GGG | + | chr4.1:54940836-54940855 | MS.gene95723:CDS | 40.0% | |
| ACAAGATGCAAGGGAATTTG+TGG | + | chr4.1:54940834-54940853 | MS.gene95723:CDS | 40.0% | |
| ACCCATTAATCTGAAAGGGA+GGG | - | chr4.1:54939436-54939455 | None:intergenic | 40.0% | |
| ACGGATTCCATAAACGGTTA+AGG | - | chr4.1:54937277-54937296 | None:intergenic | 40.0% | |
| ACTCAAGAGAAAAGGAAGGA+AGG | + | chr4.1:54940773-54940792 | MS.gene95723:CDS | 40.0% | |
| AGAGACTCAAGAGAAAAGGA+AGG | + | chr4.1:54940769-54940788 | MS.gene95723:CDS | 40.0% | |
| ATAGCGAGTGTGATAAGCTA+TGG | + | chr4.1:54937625-54937644 | MS.gene95723:CDS | 40.0% | |
| ATGTAGGAGTGAATCGTGTA+TGG | - | chr4.1:54940634-54940653 | None:intergenic | 40.0% | |
| ATTGCCGTGTAAAATGTTCG+TGG | - | chr4.1:54938323-54938342 | None:intergenic | 40.0% | |
| CAAGATGCAAGGGAATTTGT+GGG | + | chr4.1:54940835-54940854 | MS.gene95723:CDS | 40.0% | |
| CATAGATTAGGCAAAGCAGT+AGG | + | chr4.1:54937884-54937903 | MS.gene95723:intron | 40.0% | |
| CCCGATATATCATATTCCCA+TGG | + | chr4.1:54939743-54939762 | MS.gene95723:CDS | 40.0% | |
| CTACTGCTTTGCCTAATCTA+TGG | - | chr4.1:54937886-54937905 | None:intergenic | 40.0% | |
| CTATGGACATCATCAGAAGA+GGG | + | chr4.1:54937642-54937661 | MS.gene95723:CDS | 40.0% | |
| GCAGAGCAAAATGAGATTTC+TGG | - | chr4.1:54937998-54938017 | None:intergenic | 40.0% | |
| GTGCAAAAAGCTAATAGGCA+TGG | - | chr4.1:54940670-54940689 | None:intergenic | 40.0% | |
| TATGTAGTGTGGCAGATTCA+TGG | + | chr4.1:54940900-54940919 | MS.gene95723:CDS | 40.0% | |
| TCCCTCCCTTTCAGATTAAT+GGG | + | chr4.1:54939432-54939451 | MS.gene95723:intron | 40.0% | |
| TGGAAGAGACTCAAGAGAAA+AGG | + | chr4.1:54940765-54940784 | MS.gene95723:CDS | 40.0% | |
| TGGCATTTGAATGACCGATT+GGG | + | chr4.1:54937687-54937706 | MS.gene95723:CDS | 40.0% | |
| TGTTGGAGTGTGTTTGATGT+GGG | + | chr4.1:54939189-54939208 | MS.gene95723:intron | 40.0% | |
| TTGATCTTTCACCAGCAAGT+TGG | + | chr4.1:54939495-54939514 | MS.gene95723:CDS | 40.0% | |
| TTGCCGTGTAAAATGTTCGT+GGG | - | chr4.1:54938322-54938341 | None:intergenic | 40.0% | |
| TTGTACGTGGCTAAACCAAA+TGG | - | chr4.1:54940818-54940837 | None:intergenic | 40.0% | |
| TTTAAGTGACATCAACCCTG+GGG | - | chr4.1:54939471-54939490 | None:intergenic | 40.0% | |
| ! | ATGAAAGTGTGTGGTAAGTG+AGG | - | chr4.1:54939800-54939819 | None:intergenic | 40.0% |
| ! | ATGGTACAACAGGTGTTGTA+TGG | - | chr4.1:54937123-54937142 | None:intergenic | 40.0% |
| ! | ATTCTGGTGATAGTGAGACA+AGG | + | chr4.1:54937574-54937593 | MS.gene95723:CDS | 40.0% |
| ! | TTCTGGTGATAGTGAGACAA+GGG | + | chr4.1:54937575-54937594 | MS.gene95723:CDS | 40.0% |
| !! | CTTTTAAGTGACATCAACCC+TGG | - | chr4.1:54939473-54939492 | None:intergenic | 40.0% |
| !! | GTTTTGTTCCATCAGTTTCG+TGG | + | chr4.1:54938820-54938839 | MS.gene95723:intron | 40.0% |
| ATTCCCTTGCATCTTGTACG+TGG | - | chr4.1:54940831-54940850 | None:intergenic | 45.0% | |
| CATCTGAGCAAGATAGTCTC+TGG | + | chr4.1:54937667-54937686 | MS.gene95723:CDS | 45.0% | |
| CTGGCATTTGAATGACCGAT+TGG | + | chr4.1:54937686-54937705 | MS.gene95723:CDS | 45.0% | |
| GAGAAAAGGAAGGAAGGTGA+AGG | + | chr4.1:54940779-54940798 | MS.gene95723:CDS | 45.0% | |
| GCTATGGACATCATCAGAAG+AGG | + | chr4.1:54937641-54937660 | MS.gene95723:CDS | 45.0% | |
| GGCATCTCATTGCAACCATT+TGG | + | chr4.1:54940800-54940819 | MS.gene95723:CDS | 45.0% | |
| GTCCCTCCCTTTCAGATTAA+TGG | + | chr4.1:54939431-54939450 | MS.gene95723:intron | 45.0% | |
| GTGTTGGAGTGTGTTTGATG+TGG | + | chr4.1:54939188-54939207 | MS.gene95723:intron | 45.0% | |
| GTTGGAGTGTGTTTGATGTG+GGG | + | chr4.1:54939190-54939209 | MS.gene95723:intron | 45.0% | |
| TAGCCACGTACAAGATGCAA+GGG | + | chr4.1:54940825-54940844 | MS.gene95723:CDS | 45.0% | |
| TTAGCCACGTACAAGATGCA+AGG | + | chr4.1:54940824-54940843 | MS.gene95723:CDS | 45.0% | |
| ! | AGGGGGAGAAAAGTGCAATT+TGG | - | chr4.1:54940169-54940188 | None:intergenic | 45.0% |
| ! | GCTGGTTTCACTATGTAGTG+TGG | + | chr4.1:54940889-54940908 | MS.gene95723:CDS | 45.0% |
| ! | TCTTTCACCAGCAAGTTGGA+TGG | + | chr4.1:54939499-54939518 | MS.gene95723:CDS | 45.0% |
| ! | TTCGATGAATGGAGTGCCTA+TGG | + | chr4.1:54937347-54937366 | MS.gene95723:CDS | 45.0% |
| !! | CAATTTTGGCCCCCTGTTTT+GGG | - | chr4.1:54940295-54940314 | None:intergenic | 45.0% |
| !! | TAGCACAGCCGTTGATTCTA+TGG | + | chr4.1:54939397-54939416 | MS.gene95723:intron | 45.0% |
| !! | AAAAAATATTAAAATTATGA+AGG | + | chr4.1:54940712-54940731 | MS.gene95723:intron | 5.0% |
| !! | ACTAAAAATTTAAATTTATA+AGG | + | chr4.1:54938998-54939017 | MS.gene95723:intron | 5.0% |
| !!! | AAAATTTTCATTTTTTAATA+GGG | + | chr4.1:54940435-54940454 | MS.gene95723:intron | 5.0% |
| !!! | ATTAAAAGTTTTTTTTTTTA+GGG | - | chr4.1:54940023-54940042 | None:intergenic | 5.0% |
| GATTGGAACTCCAACGCCAT+AGG | - | chr4.1:54937366-54937385 | None:intergenic | 50.0% | |
| GGTTAGCAGAAAGATCCCCA+GGG | + | chr4.1:54939453-54939472 | MS.gene95723:CDS | 50.0% | |
| TACTTCATGGGCATTCGGCA+TGG | + | chr4.1:54940959-54940978 | MS.gene95723:CDS | 50.0% | |
| TGGTAGGGACCAAGAAAAGC+TGG | + | chr4.1:54940871-54940890 | MS.gene95723:CDS | 50.0% | |
| ! | CAAGTTGGATGGCAGTTGCT+TGG | + | chr4.1:54939510-54939529 | MS.gene95723:CDS | 50.0% |
| !! | GCAATTTTGGCCCCCTGTTT+TGG | - | chr4.1:54940296-54940315 | None:intergenic | 50.0% |
| !! | GGGCTCTGGAAAATGTGGTA+GGG | + | chr4.1:54940856-54940875 | MS.gene95723:CDS | 50.0% |
| !! | TTGTGGGGCTCTGGAAAATG+TGG | + | chr4.1:54940851-54940870 | MS.gene95723:CDS | 50.0% |
| ACGCCACGTGTCCCAAAACA+GGG | + | chr4.1:54940281-54940300 | MS.gene95723:intron | 55.0% | |
| CAAGGGAATTTGTGGGGCTC+TGG | + | chr4.1:54940842-54940861 | MS.gene95723:CDS | 55.0% | |
| GCAACTGCCATCCAACTTGC+TGG | - | chr4.1:54939509-54939528 | None:intergenic | 55.0% | |
| ! | GAATGGAGTGCCTATGGCGT+TGG | + | chr4.1:54937353-54937372 | MS.gene95723:CDS | 55.0% |
| ! | GGGTTAGCAGAAAGATCCCC+AGG | + | chr4.1:54939452-54939471 | MS.gene95723:CDS | 55.0% |
| !! | GGGGCTCTGGAAAATGTGGT+AGG | + | chr4.1:54940855-54940874 | MS.gene95723:CDS | 55.0% |
| CGCCACGTGTCCCAAAACAG+GGG | + | chr4.1:54940282-54940301 | MS.gene95723:intron | 60.0% | |
| GACGCCACGTGTCCCAAAAC+AGG | + | chr4.1:54940280-54940299 | MS.gene95723:intron | 60.0% | |
| GCCACGTGTCCCAAAACAGG+GGG | + | chr4.1:54940283-54940302 | MS.gene95723:intron | 60.0% | |
| !!! | GCCCCCTGTTTTGGGACACG+TGG | - | chr4.1:54940287-54940306 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 54937076 | 54940985 | 54937076 | ID=MS.gene95723 |
| chr4.1 | mRNA | 54937076 | 54940985 | 54937076 | ID=MS.gene95723.t1;Parent=MS.gene95723 |
| chr4.1 | exon | 54937076 | 54937159 | 54937076 | ID=MS.gene95723.t1.exon1;Parent=MS.gene95723.t1 |
| chr4.1 | CDS | 54937076 | 54937159 | 54937076 | ID=cds.MS.gene95723.t1;Parent=MS.gene95723.t1 |
| chr4.1 | exon | 54937260 | 54937468 | 54937260 | ID=MS.gene95723.t1.exon2;Parent=MS.gene95723.t1 |
| chr4.1 | CDS | 54937260 | 54937468 | 54937260 | ID=cds.MS.gene95723.t1;Parent=MS.gene95723.t1 |
| chr4.1 | exon | 54937563 | 54937773 | 54937563 | ID=MS.gene95723.t1.exon3;Parent=MS.gene95723.t1 |
| chr4.1 | CDS | 54937563 | 54937773 | 54937563 | ID=cds.MS.gene95723.t1;Parent=MS.gene95723.t1 |
| chr4.1 | exon | 54939446 | 54939531 | 54939446 | ID=MS.gene95723.t1.exon4;Parent=MS.gene95723.t1 |
| chr4.1 | CDS | 54939446 | 54939531 | 54939446 | ID=cds.MS.gene95723.t1;Parent=MS.gene95723.t1 |
| chr4.1 | exon | 54939740 | 54939831 | 54939740 | ID=MS.gene95723.t1.exon5;Parent=MS.gene95723.t1 |
| chr4.1 | CDS | 54939740 | 54939831 | 54939740 | ID=cds.MS.gene95723.t1;Parent=MS.gene95723.t1 |
| chr4.1 | exon | 54940744 | 54940985 | 54940744 | ID=MS.gene95723.t1.exon6;Parent=MS.gene95723.t1 |
| chr4.1 | CDS | 54940744 | 54940985 | 54940744 | ID=cds.MS.gene95723.t1;Parent=MS.gene95723.t1 |
| Gene Sequence |
| Protein sequence |
