AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96026.t1 MTR_8g069610 65.812 351 113 4 5 348 20 370 4.76e-167 473
MS.gene96026.t1 MTR_2g073040 80.669 269 51 1 1 268 1 269 1.83e-163 459
MS.gene96026.t1 MTR_8g069575 66.667 336 107 3 19 349 33 368 2.11e-163 464
MS.gene96026.t1 MTR_2g073020 79.478 268 55 0 1 268 15 282 5.10e-162 456
MS.gene96026.t1 MTR_3g095890 64.348 345 109 8 11 348 58 395 1.83e-152 437
MS.gene96026.t1 MTR_8g069600 65.312 320 102 3 38 348 30 349 3.33e-150 430
MS.gene96026.t1 MTR_5g033650 62.813 320 115 2 34 349 4 323 3.83e-146 419
MS.gene96026.t1 MTR_8g069640 61.808 343 121 5 9 348 26 361 7.27e-146 419
MS.gene96026.t1 MTR_8g069720 57.550 351 136 4 3 348 19 361 5.18e-143 412
MS.gene96026.t1 MTR_3g077430 56.973 337 137 7 19 349 88 422 5.89e-135 394
MS.gene96026.t1 MTR_8g069580 55.285 369 135 6 4 363 21 368 1.70e-133 387
MS.gene96026.t1 MTR_4g105400 58.361 305 122 4 50 349 11 315 1.27e-127 371
MS.gene96026.t1 MTR_8g069660 52.846 369 151 8 9 375 26 373 2.94e-127 372
MS.gene96026.t1 MTR_8g069715 54.054 333 129 7 30 349 46 367 1.00e-118 350
MS.gene96026.t1 MTR_8g069590 62.308 260 92 4 94 349 4 261 1.07e-112 331
MS.gene96026.t1 MTR_8g088510 50.867 346 147 7 26 349 29 373 2.73e-112 334
MS.gene96026.t1 MTR_7g116420 47.977 346 152 5 32 349 52 397 3.15e-110 330
MS.gene96026.t1 MTR_2g093840 50.000 378 124 13 1 367 15 338 3.20e-107 319
MS.gene96026.t1 MTR_1g079730 45.103 388 169 11 4 349 23 408 3.54e-107 322
MS.gene96026.t1 MTR_2g062610 48.246 342 152 6 31 348 42 382 8.33e-107 321
MS.gene96026.t1 MTR_2g062610 50.758 264 115 4 99 348 37 299 7.29e-90 275
MS.gene96026.t1 MTR_2g062610 50.758 264 115 4 99 348 30 292 7.75e-90 274
MS.gene96026.t1 MTR_6g012620 42.529 348 171 9 33 354 26 370 1.83e-85 265
MS.gene96026.t1 MTR_3g103980 40.988 344 167 9 30 343 48 385 2.86e-81 255
MS.gene96026.t1 MTR_3g104000 41.408 355 173 10 30 354 27 376 1.86e-80 253
MS.gene96026.t1 MTR_3g104030 40.922 347 179 9 30 354 32 374 2.15e-79 250
MS.gene96026.t1 MTR_3g104070 38.920 352 186 8 30 354 35 384 6.53e-79 249
MS.gene96026.t1 MTR_1g016910 37.602 367 190 9 4 339 10 368 6.48e-68 220
MS.gene96026.t1 MTR_8g069695 46.569 204 107 2 150 351 14 217 1.23e-60 196
MS.gene96026.t1 MTR_3g104030 39.051 274 140 5 95 343 30 301 5.11e-60 198
MS.gene96026.t1 MTR_5g078580 36.825 315 187 8 34 345 36 341 1.89e-51 177
MS.gene96026.t1 MTR_8g040850 30.366 382 235 10 4 375 5 365 5.14e-48 167
MS.gene96026.t1 MTR_8g040890 31.398 379 209 11 33 372 32 398 1.46e-46 164
MS.gene96026.t1 MTR_5g094280 35.612 278 167 9 30 303 16 285 9.00e-44 155
MS.gene96026.t1 MTR_3g108680 30.678 339 204 12 4 339 22 332 3.59e-43 155
MS.gene96026.t1 MTR_5g092260 30.252 357 205 12 1 349 19 339 4.65e-39 144
MS.gene96026.t1 MTR_8g069750 54.128 109 50 0 201 309 151 259 5.27e-37 135
MS.gene96026.t1 MTR_8g104480 31.987 297 183 11 57 346 8 292 1.10e-34 131
MS.gene96026.t1 MTR_2g046390 31.935 310 177 12 48 346 37 323 4.90e-33 127
MS.gene96026.t1 MTR_8g012985 38.144 194 111 6 159 346 2 192 9.55e-33 123
MS.gene96026.t1 MTR_8g069665 64.444 90 31 1 46 135 104 192 2.12e-32 121
MS.gene96026.t1 MTR_8g069630 63.953 86 29 2 265 349 1 85 8.01e-30 112
MS.gene96026.t1 MTR_5g065260 37.566 189 107 6 161 345 2 183 8.38e-29 112
MS.gene96026.t1 MTR_2g046430 34.715 193 117 6 160 346 3 192 4.38e-27 108
MS.gene96026.t1 MTR_2g046520 34.197 193 118 6 160 346 3 192 1.12e-25 104
MS.gene96026.t1 MTR_2g046300 28.571 308 175 9 48 346 37 308 7.93e-25 104
MS.gene96026.t1 MTR_0009s0020 36.496 137 82 3 202 338 18 149 1.20e-21 90.5
MS.gene96026.t1 MTR_7g072230 35.115 131 79 4 220 346 34 162 6.28e-19 84.7
MS.gene96026.t1 MTR_8g069585 64.000 50 18 0 11 60 23 72 8.84e-16 73.6
MS.gene96026.t1 MTR_5g065920 51.786 56 24 2 149 202 8 62 4.33e-12 61.6
MS.gene96026.t1 MTR_8g069950 50.000 54 27 0 221 274 59 112 5.41e-12 62.8
MS.gene96026.t1 MTR_2g073050 100.000 27 0 0 322 348 1 27 2.67e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96026.t1 AT1G10750 59.524 336 130 5 19 349 90 424 9.02e-145 419
MS.gene96026.t1 AT1G70550 58.457 337 134 4 18 349 87 422 2.81e-138 402
MS.gene96026.t1 AT1G23340 57.764 322 132 2 32 349 45 366 4.62e-138 400
MS.gene96026.t1 AT1G23340 57.764 322 132 2 32 349 45 366 4.62e-138 400
MS.gene96026.t1 AT5G50150 54.118 340 150 4 16 349 38 377 4.06e-129 377
MS.gene96026.t1 AT5G18460 50.442 339 146 5 33 349 49 387 5.86e-115 342
MS.gene96026.t1 AT3G13510 48.415 347 157 7 24 349 31 376 2.96e-109 327
MS.gene96026.t1 AT1G55360 48.555 346 155 6 26 349 35 379 3.96e-109 327
MS.gene96026.t1 AT2G44240 48.204 334 163 4 25 349 26 358 1.20e-108 325
MS.gene96026.t1 AT5G56530 47.154 369 162 11 3 349 20 377 2.07e-106 320
MS.gene96026.t1 AT5G56530 47.154 369 162 11 3 349 20 377 2.07e-106 320
MS.gene96026.t1 AT2G44210 48.235 340 151 6 33 348 33 371 1.03e-104 315
MS.gene96026.t1 AT2G44220 48.024 329 156 8 33 349 34 359 1.52e-101 306
MS.gene96026.t1 AT1G23340 57.500 240 99 1 32 268 45 284 3.35e-100 299
MS.gene96026.t1 AT2G44210 44.504 373 146 8 33 348 33 401 5.42e-99 301
MS.gene96026.t1 AT2G17750 44.753 324 165 9 33 345 29 349 2.36e-93 285
MS.gene96026.t1 AT2G44250 45.748 341 162 10 31 354 35 369 4.07e-88 272
MS.gene96026.t1 AT2G19360 43.333 360 169 10 24 349 25 383 4.89e-88 273
MS.gene96026.t1 AT3G48230 43.385 325 166 9 34 345 7 326 1.74e-79 249
MS.gene96026.t1 AT1G70550 59.709 206 78 3 18 219 87 291 1.31e-78 244
MS.gene96026.t1 AT5G19170 42.271 317 159 8 46 349 23 328 6.46e-75 238
MS.gene96026.t1 AT1G10750 57.812 192 76 4 19 206 90 280 2.64e-72 230
MS.gene96026.t1 AT5G25950 39.093 353 182 7 22 343 32 382 7.49e-67 218
MS.gene96026.t1 AT4G23370 37.830 341 195 9 17 345 19 354 1.05e-65 214
MS.gene96026.t1 AT2G44250 43.772 281 140 8 80 348 6 280 3.27e-65 211
MS.gene96026.t1 AT2G20170 37.069 348 198 11 17 352 19 357 1.06e-60 201
MS.gene96026.t1 AT2G20170 37.069 348 198 11 17 352 19 357 1.06e-60 201
MS.gene96026.t1 AT4G23355 36.443 343 193 12 31 359 36 367 5.39e-60 199
MS.gene96026.t1 AT4G23390 38.365 318 177 9 38 344 41 350 1.59e-59 198
MS.gene96026.t1 AT4G23365 36.364 330 187 13 31 347 36 355 1.79e-59 198
MS.gene96026.t1 AT4G23360 36.705 346 189 14 31 359 36 368 2.00e-58 195
MS.gene96026.t1 AT5G25960 37.791 344 166 8 22 354 13 319 1.04e-57 192
MS.gene96026.t1 AT4G23350 34.097 349 195 12 31 359 36 369 3.66e-57 192
MS.gene96026.t1 AT2G20170 35.072 345 192 10 17 352 19 340 4.15e-55 186
MS.gene96026.t1 AT4G23380 35.347 331 184 11 31 345 37 353 1.94e-53 182
MS.gene96026.t1 AT2G35250 33.739 329 173 13 55 375 24 315 1.10e-45 160
MS.gene96026.t1 AT1G10190 33.687 377 208 19 4 359 7 362 3.84e-45 160
MS.gene96026.t1 AT4G15050 33.795 361 201 17 18 359 21 362 3.61e-44 157
MS.gene96026.t1 AT2G27320 35.577 312 161 12 57 354 30 315 4.34e-44 155
MS.gene96026.t1 AT4G17505 31.046 306 164 10 46 347 18 280 1.65e-38 140
MS.gene96026.t1 AT4G15053 32.055 365 204 18 1 343 13 355 3.45e-38 142
MS.gene96026.t1 AT2G38255 37.073 205 104 7 58 258 14 197 5.62e-35 128
MS.gene96026.t1 AT4G10220 31.921 354 210 15 33 372 47 383 3.06e-34 131
MS.gene96026.t1 AT5G25410 31.661 319 183 13 46 352 32 327 3.25e-34 130
MS.gene96026.t1 AT2G24950 29.794 339 210 14 33 358 55 378 1.38e-33 129
MS.gene96026.t1 AT4G23373 36.842 209 105 8 38 241 40 226 8.64e-33 125
MS.gene96026.t1 AT5G60380 30.743 296 179 12 58 346 44 320 3.00e-30 119
MS.gene96026.t1 AT5G46820 29.044 272 159 9 49 307 8 258 5.35e-30 118
MS.gene96026.t1 AT5G46810 27.660 282 182 8 58 326 11 283 6.44e-30 118
MS.gene96026.t1 AT5G11660 32.114 246 151 8 108 347 26 261 8.76e-29 114
MS.gene96026.t1 AT4G17860 29.206 315 185 13 58 354 29 323 1.51e-28 114
MS.gene96026.t1 AT5G05030 29.667 300 186 11 56 347 36 318 1.19e-27 112
MS.gene96026.t1 AT5G36680 31.621 253 140 10 108 347 52 284 4.64e-27 110
MS.gene96026.t1 AT5G36770 31.621 253 140 10 108 347 52 284 4.64e-27 110
MS.gene96026.t1 AT4G10210 28.608 395 232 18 1 369 16 386 1.05e-26 110
MS.gene96026.t1 AT5G46200 28.367 349 180 14 57 349 30 364 1.66e-25 107
MS.gene96026.t1 AT4G23080 28.804 368 203 17 1 339 16 353 1.27e-24 104
MS.gene96026.t1 AT5G25415 27.636 275 166 11 112 375 52 304 4.37e-21 93.6
MS.gene96026.t1 AT2G03930 46.067 89 43 2 148 231 42 130 2.09e-18 82.0
MS.gene96026.t1 AT5G04937 27.723 202 117 7 179 375 3 180 1.61e-16 77.8
MS.gene96026.t1 AT5G37520 30.128 156 82 7 218 355 33 179 3.20e-13 68.6

Find 84 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTGTTCACAAGTTTAA+AGG 0.149216 2.4:+22988552 MS.gene96026:CDS
AATTCAGCTTGTCTCAAATA+TGG 0.191747 2.4:+22986426 MS.gene96026:CDS
AATTACTTTATTAATCTATA+AGG 0.263480 2.4:+22987889 MS.gene96026:CDS
AGTGCAACTACGGTTGAATT+TGG 0.267799 2.4:+22988577 MS.gene96026:CDS
CATTCATATGGGTCTGTTAC+TGG 0.284157 2.4:+22986338 MS.gene96026:CDS
CAAAATGTCCACTACCCATT+TGG 0.297259 2.4:-22988642 None:intergenic
CTAATTGGAATTGTTCCTTC+TGG 0.317210 2.4:-22983150 None:intergenic
GCAATGCGGTAGTGTGTATT+TGG 0.331258 2.4:-22989939 None:intergenic
TCCCTAGAATATTCGTCTAT+TGG 0.331579 2.4:+22987456 MS.gene96026:CDS
GGGAATTGGTGGCTTGAATA+TGG 0.337164 2.4:+22988499 MS.gene96026:CDS
TCTCCAGCTTCTACGTATAA+TGG 0.360224 2.4:+22987854 MS.gene96026:CDS
TTCTGATCGGAAAGTTTGAT+TGG 0.367187 2.4:-22981511 None:intergenic
GTCCAATAGACGAATATTCT+AGG 0.370494 2.4:-22987458 None:intergenic
GAAGTGTATATAAAGTCAAC+TGG 0.386484 2.4:+22988604 MS.gene96026:CDS
AAAATGTCCACTACCCATTT+GGG 0.391237 2.4:-22988641 None:intergenic
TACACTGCACAGCATTCATA+TGG 0.392304 2.4:+22986326 MS.gene96026:intron
GCTAGCTCTATTGACACGTT+TGG 0.393975 2.4:+22983201 MS.gene96026:CDS
CTGGCAACATAGTTGGATAT+TGG 0.400960 2.4:+22988524 MS.gene96026:CDS
TTGCAGGCCAATGGATATAA+AGG 0.405072 2.4:+22987758 MS.gene96026:intron
TCCAGTTCCTTTATATCCAT+TGG 0.414487 2.4:-22987765 None:intergenic
GCCAATGGATATAAAGGAAC+TGG 0.424395 2.4:+22987764 MS.gene96026:CDS
TACCACTCAAAATGTCCGTT+TGG 0.434674 2.4:-22983092 None:intergenic
CACCGCGATAGCGCCGGTAG+CGG 0.434868 2.4:-22989908 None:intergenic
GACACACTCATCAACCCAAA+TGG 0.443353 2.4:+22988627 MS.gene96026:CDS
GCTTGCTTAGCTTCAGAAGC+AGG 0.450298 2.4:+22981474 MS.gene96026:CDS
GGAGATAGTCCCCGTAGATC+TGG 0.456163 2.4:-22987436 None:intergenic
AAGTTGTGAATTCTGATAAC+AGG 0.457116 2.4:+22988707 MS.gene96026:CDS
TATGGATCTGGCAACATAGT+TGG 0.458201 2.4:+22988517 MS.gene96026:CDS
GTTACTGGAGATCGATACTA+TGG 0.463393 2.4:+22986353 MS.gene96026:CDS
CAGGTGAGTCACCAGATCTA+CGG 0.467985 2.4:+22987425 MS.gene96026:intron
TGCTACAATTTACGTTGTCC+AGG 0.468492 2.4:+22987788 MS.gene96026:CDS
CAGTATTGAAGCTGGTTGGC+AGG 0.470505 2.4:+22986472 MS.gene96026:CDS
TTGCTAGTTTGAACAAAGCC+TGG 0.475024 2.4:-22987806 None:intergenic
AATACTGTTCTCATTTCCAT+TGG 0.479089 2.4:-22986456 None:intergenic
TGATCTGCACGATGTTGAAT+CGG 0.487866 2.4:-22989970 None:intergenic
CAAAGGCTACAATCAATTTG+TGG 0.489320 2.4:+22986378 MS.gene96026:CDS
GATCCTCTAGAAAGATCAAA+AGG 0.495299 2.4:+22983063 MS.gene96026:CDS
TTTGATCATCCTCTATTGAA+AGG 0.498430 2.4:+22982913 MS.gene96026:CDS
GGAAGAAAATTAAGTCAAGT+AGG 0.503703 2.4:+22983222 MS.gene96026:CDS
TTGTCAATAGCAGCCGCTAC+CGG 0.507993 2.4:+22989895 MS.gene96026:intron
ATTCAGCTTGTCTCAAATAT+GGG 0.509437 2.4:+22986427 MS.gene96026:CDS
GGCGCTATCGCGGTGCGGAG+CGG 0.509492 2.4:+22989916 MS.gene96026:CDS
GCAACTACGGTTGAATTTGG+TGG 0.515818 2.4:+22988580 MS.gene96026:CDS
AGGTGAGTCACCAGATCTAC+GGG 0.516468 2.4:+22987426 MS.gene96026:intron
TGTCCATTATACGTAGAAGC+TGG 0.519794 2.4:-22987857 None:intergenic
TGGTGGCTTGAATATGGATC+TGG 0.522110 2.4:+22988505 MS.gene96026:CDS
AATAGAGGATGATCAAAAGC+TGG 0.529090 2.4:-22982907 None:intergenic
AAAGGCTACAATCAATTTGT+GGG 0.531509 2.4:+22986379 MS.gene96026:CDS
TACCACATGTTTATATTCAG+TGG 0.531714 2.4:-22983253 None:intergenic
ACACACTCATCAACCCAAAT+GGG 0.533145 2.4:+22988628 MS.gene96026:CDS
AGCAAAACATTTGCACTTGG+AGG 0.534063 2.4:+22987824 MS.gene96026:CDS
CAAATATGGGTCCTCGCCAA+TGG 0.537462 2.4:+22986440 MS.gene96026:CDS
AGCCGCTACCGGCGCTATCG+CGG 0.537554 2.4:+22989906 MS.gene96026:intron
ATCAAAAGGCAATAACCAAA+CGG 0.540787 2.4:+22983077 MS.gene96026:CDS
TTTAAAGGATAGTGCAACTA+CGG 0.543349 2.4:+22988567 MS.gene96026:CDS
AAGTTTGATTGGCTAACTGA+TGG 0.543923 2.4:-22981500 None:intergenic
TAGTAGTAATTGCAGGCCAA+TGG 0.546998 2.4:+22987749 MS.gene96026:intron
GCTCCGCACCGCGATAGCGC+CGG 0.547630 2.4:-22989914 None:intergenic
CTTAAGCAGATTAACAAGCC+TGG 0.555865 2.4:+22981570 MS.gene96026:CDS
CTTTAAACTTGTGAACAAAG+AGG 0.560841 2.4:-22988551 None:intergenic
TCCAATAGACGAATATTCTA+GGG 0.563578 2.4:-22987457 None:intergenic
CAATTTGTGGGCCCCACATG+TGG 0.565259 2.4:+22986391 MS.gene96026:CDS
AATCAAACTTTCCGATCAGA+AGG 0.566738 2.4:+22981513 MS.gene96026:CDS
ACTTGAATTGTCTTCACACC+AGG 0.569832 2.4:-22981588 None:intergenic
ACTTATGCAATCCTTCTGAT+CGG 0.571957 2.4:-22981524 None:intergenic
ACACTGCACAGCATTCATAT+GGG 0.580123 2.4:+22986327 MS.gene96026:intron
TCATCAACCCAAATGGGTAG+TGG 0.582932 2.4:+22988634 MS.gene96026:CDS
ACTAGCAAAACATTTGCACT+TGG 0.590378 2.4:+22987821 MS.gene96026:CDS
TAGAATATTCGTCTATTGGA+CGG 0.590380 2.4:+22987460 MS.gene96026:CDS
AGAACAGTATTGAAGCTGGT+TGG 0.594350 2.4:+22986468 MS.gene96026:CDS
CAATCTATAATATCGCCATC+CGG 0.598218 2.4:-22982865 None:intergenic
AAACTTGTGAACAAAGAGGA+TGG 0.600976 2.4:-22988547 None:intergenic
CTACCGGCGCTATCGCGGTG+CGG 0.611961 2.4:+22989911 MS.gene96026:CDS
TATGATGAATCATGTCCAGA+AGG 0.617584 2.4:+22983135 MS.gene96026:CDS
TGTTCTCATTTCCATTGGCG+AGG 0.618075 2.4:-22986451 None:intergenic
AAAATTAAGTCAAGTAGGAG+CGG 0.619434 2.4:+22983227 MS.gene96026:CDS
AATGAGAACAGTATTGAAGC+TGG 0.620381 2.4:+22986464 MS.gene96026:CDS
ACACTACCGCATTGCTATCG+CGG 0.627038 2.4:+22989947 MS.gene96026:CDS
TGAGTGGTAAGTTTCAATTG+TGG 0.638553 2.4:+22983106 MS.gene96026:CDS
AGATCGATACTATGGAGCAA+AGG 0.649389 2.4:+22986361 MS.gene96026:CDS
TGCCACTGAATATAAACATG+TGG 0.662742 2.4:+22983251 MS.gene96026:CDS
AAGTGTATATAAAGTCAACT+GGG 0.670587 2.4:+22988605 MS.gene96026:CDS
AATCGGCCGCGATAGCAATG+CGG 0.758668 2.4:-22989953 None:intergenic
GGTGAGTCACCAGATCTACG+GGG 0.807696 2.4:+22987427 MS.gene96026:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.4 gene 22981459 22990016 22981459 ID=MS.gene96026
chr2.4 mRNA 22981459 22990016 22981459 ID=MS.gene96026.t1;Parent=MS.gene96026
chr2.4 exon 22981459 22981608 22981459 ID=MS.gene96026.t1.exon1;Parent=MS.gene96026.t1
chr2.4 CDS 22981459 22981608 22981459 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
chr2.4 exon 22982862 22982948 22982862 ID=MS.gene96026.t1.exon2;Parent=MS.gene96026.t1
chr2.4 CDS 22982862 22982948 22982862 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
chr2.4 exon 22983063 22983272 22983063 ID=MS.gene96026.t1.exon3;Parent=MS.gene96026.t1
chr2.4 CDS 22983063 22983272 22983063 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
chr2.4 exon 22986338 22986493 22986338 ID=MS.gene96026.t1.exon4;Parent=MS.gene96026.t1
chr2.4 CDS 22986338 22986493 22986338 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
chr2.4 exon 22987428 22987481 22987428 ID=MS.gene96026.t1.exon5;Parent=MS.gene96026.t1
chr2.4 CDS 22987428 22987481 22987428 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
chr2.4 exon 22987764 22987910 22987764 ID=MS.gene96026.t1.exon6;Parent=MS.gene96026.t1
chr2.4 CDS 22987764 22987910 22987764 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
chr2.4 exon 22988487 22988728 22988487 ID=MS.gene96026.t1.exon7;Parent=MS.gene96026.t1
chr2.4 CDS 22988487 22988728 22988487 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
chr2.4 exon 22989908 22990016 22989908 ID=MS.gene96026.t1.exon8;Parent=MS.gene96026.t1
chr2.4 CDS 22989908 22990016 22989908 ID=cds.MS.gene96026.t1;Parent=MS.gene96026.t1
Gene Sequence

>MS.gene96026

ATGCACTGTTTCATTGCTTGCTTAGCTTCAGAAGCAGGTAACCATCAGTTAGCCAATCAAACTTTCCGATCAGAAGGATTGCATAAGTTGAAGAAAAAAATAGCAAGTCGTCTTAAGCAGATTAACAAGCCTGGTGTGAAGACAATTCAAGTATGTTTAAAATATCTTAAATCTTCATATTAGAAAATTTTATGAAATAATATAAGTTTAGAGGGTAATTTTAATTTTTCATGATAAATTATCTTGTTTGGATAATAATTTGTTGAAGCTAAACTTAAAGCATTTCAAATACTCCATCCTGATCGAAGTCATTTTAGTTACCTCAAAAATTACTCCTTCCTAGCAGCTATAAATTTTCTTTTTTTTTTTTTTAGACAAAAGGAGAAATATAATAAATAAAAAGAAAGATACAGAGCTGGGGGACATTGGACCTGACCCAGAATCAACCCAATAGGGAATACATCATGATAAAACATTAAAGTGAAACAACCCCAATCAATCCTAACAAATTGAACACTCCTCACGGGCGCAACCCGGCAAACTCGCGTACGAGCTCGAAACCAAGTTACAAAAAAGATGACGAATGATCATCCGTAGGATAAAAAAGGGTTTTAGGTTGGCGAATGGATCGACCGCCAGCACGGTATTAAGATCCACGTACCAGCAACCCCCTGAACAAAGCAGCAGGTATAAAGCTCTTTCGAGCATCACTCCGAAAACAATCACACGGGCTGCGACGGATAAAGGGACGGTACCGGAGTGGAGGCGGACCTGAAGCATCGAGACCTGCAGATCTAAACAGACCAGGAAGAATCAGAGAATCTAGCAAGGAACATCAACACAACCAGTCTCTCAAGAACGTACTTGAACCCAGATCGAGTCCAAAACGTCGGTAACCAAACAACCCTTACGGGTTTACGAAACCAAAGGTCACATCTGCAACCACCAAATTAGAAACTCTCATTACCTAATTATAAAATGTGAATCTTAAAGTATTAATGGTCCCTATGTTGTTTTTCAAAATTTAATAGTTTGTCCCAATATGTTCAAAATGTGCACATTAGACCCTTTAACTTTTTCAAAATTTGTTAATTGGTCCTTATATTTTATAAAATGTATAAAGCTCTTCTTATAAATTTTTAAACATTGCAAATTGATCCCTATATTTTTTCAAAACTTCAATGTTGATCCAAATAATTTTAAAACTTCTGAAACTTACACAAATGATCAAACTTTAAATAAGCAATTACTATATCTAATAAACAAAAAATATCTTATAATAAAGAGAATTCTATTAAAGCATTTTAATTCTTTTTAACTTTCATATTCTTTATCAAACCACACTCTTAGATTAATGGTTGTGTTTGTTTTTATATATTTTGTGTTTACGTTCATTTTTACAGAGTCCGGATGGCGATATTATAGATTGCGTTGTGTCTCATAAACAACCAGCTTTTGATCATCCTCTATTGAAAGGACAAAAACCATTGGTATGTTTTGTTAATTAAATTAAGGAAAATTCAAAAATATACTTTTTGAATCAAATTAAGATATTATATTTCAACTTAATAATTGATCATTTTTTATGCATATGATATATATAGGATCCTCTAGAAAGATCAAAAGGCAATAACCAAACGGACATTTTGAGTGGTAAGTTTCAATTGTGGAGCTTATATGATGAATCATGTCCAGAAGGAACAATTCCAATTAGAAGAGCAAAAGAAGAAGACATATTAAGAGCTAGCTCTATTGACACGTTTGGAAGAAAATTAAGTCAAGTAGGAGCGGATGCCACTGAATATAAACATGTGGTATGCAATCACAGAAACTCGTATTTTTTGTCTCTTAATATTTTCTGCTTTTCTGGTTTTTTTCTTCTTCTTTTTCTTTTTTCATGCAAATTATAATTTTTTTAGAGGGATAAATGCCAAATGTAAATAGAAAATTACACATGAATAGAAGGCAAACGAGTAATAAGTTGCACTGTTAACTTTTTTTGGATGACAAAACCAATCTTCTTAAAATCAACATACATGGACCTATGAGACGCAACACAACACTACTATGTATGCCCTTTTTTGAACTCTTTGTAGGAGATTTATATTCTTTGGTGTTAGGAAGCCAAACATGTCTTTTAGATTGACCAATCTTCATGTTCGAACTCGAGTTTAGGCATGCAATAATGTTAAAACTCATAAAAAAGAATTTGCCATCCATTTGAATCATCCCAAACTTGAGACATTAATCTTTGCAGTTCGCTGTGCGGATGATATACCTGGTTTAAAAAAAAAATAGTAAAAAACTCGTACATTCACATCGGTCACATAACATCGCGGTAGTTATATACAAAATAATTATATTTGTAATATTGTGAAATGTTTAAAGATAATAAATAAAAGTTATTAATACTAGTATAATGTTTCCATTAAATAGTTCTTTCTTTTATATGAAAAAATCCAATAAATATTAGCATCGCGCCTATTGCAGGTTTTATTTGCTTATATGTGAGAATGTAAATTTTTATGTATCAATATGAGAAAGTCGATATGATAAAATTATGAAAACTCATGACTATTTTCAAAATATCAACATTAATATAGTGTTTCTATTAAATATTTTGTTATTTTATATGCAAAACACCGTTAAATATTTGTATCGCACTCGTTGCAGATTTTATGTGCTTATATGTGCGAAATCATCTTTTTATCAATATGAGAAAGTCGATGTGATAAAATAACATATCAACTTTAATGCAGTGTTTGAATTAAATATTTTTTATTTTTTGTTCAAAACATCGTTAAATATTTGCACCGTATTTGTTGCAGAATTCTGTTTATATATTCAGAAGAAATTTTTTATGTACCGATATGATGAAGTCGATATGATAATTTTTTTTTATCGAAACGATATGATAAAATGTTGAAAATGCACAACTATTTTGTTTTGATTATTTTTTAATATGAAAATAAGTGATATTAAGAGATTAAAATAGGTGATAATAAACTATTTTCTTATATTTGTGACATAAGAGAGGAAACCAAACTGTTTTCCTATATATTTATGTCATAGTACATCATTCATTTTGTTTACTATTAAATAGAGAATTGACCATGAATTCTTTTTGCTTATTATTAAATAGAGAATTGACCATAAAAGTCGTTAAATTAGTGAGATTAAAAGTCTAATCGATGACATTTTAGTCAATTTGGTGGATATCAGTTTTAATATATCAAGTTTTATCTATTTTTTTTTAAGAAGTTTGTTATCGATTTTGTTTAATAATATTCAATTGTTTCGGTTTTTGTAAAACAAAAAAGAAATTATCCTTTTTCTACTATAACCGTTTTTTCAAGCAGTTTTTTTATTGAACTTTTATTAATAATATCCAATTGCATCACTTTTTGTTGAACAAAACAAATTGTTTTTTTTTTTTTAACTATAACCGTTTGGGTTAATAGTTCCTTGTAATATATGTTATTTCCCGTTTTTCCTCCTATAAATTTTTTTTATTTACCCTCCTGTAAAAAAAATTTTGTTTTGGAAATGTCCATCTAATAGGTCATTCAAAAACCTTTTTTTTTTTTTTTTTTGCAGAAATTTTCGTTTTTGAATGACCTATTAGACGGTATTCCAAAACAAAATTTATTTACAGGGTGGTAAATAAAAAAAATTTTACGGGGGGAGGGAAACTGGAAGGGGGTAAATCACCATTAACCCTAACTGTTTTGTTAAAAAAGTTTATTATCGATTGATAAGAATTATGTATTGCCAATTAAATTAAGGTCATTAAGAAATTAATCTAAAAGACTTTAATAAATTTATTGAACATTGTTATTAGGGGAAATTACACAAACCTCCCCTGAGGTTTATGTAAATATATCCAACCTCCCCTCTGTTTTCTCAAATAGCAACAACACCCCCTACTGTTAGTCTCCATCCACCTTCCGTTAAAAAAATGCAAATGTATCATTTTCAATTAAAAAATTGTTTTTCATCCATTTCCACAATAAATCAATCTATTGTACACCCACGGCCTCAAATGCAATTAAATGATTGCCCAGAAAACAAAACTCACGTAGACATAGAAGCCACAACAACAACCAGGCCCCTAATTAAAACATACGAAAAGGGAAAATATATAAGAAGACCCATCTTCAAAGTTCAAACTAGCTCTACCTATTCTTCCAGAAAAAGAGACATACATAAATCGACATAACAAGATAAAACAAACATGACAAAAAATTAAAATGAAATACAAATGGAAGTAACAGTAGATTGAAAAGAAATCAAATTAAGATAAACCACACTCTCTTGCTCACGATAGGTGGAGAGGGAGGGAACAAGATGTAAAATGATTGAGATACTTTGTTGATTTTGAAGCCACCAAATTTGATGCGGCAAACACAGTAATGAAATATCATTGCGTAATCGACGGTGGTACTAGTGAAAGAAGAGACGGGAAATAACAGTCTTGATGAGTTACTTGTAGCGAGTGTTATTTTGATGCCGATAACAGTACCAGAGGCAAAGAAATTGAAAGACCTTCACATGAAGGTGGAGGGACGTGGCCAGACAATCCAAATGTTAGTGTTAACCTAAAAACAAACGGTGTTAAGTTTCTAAGGGATGTACACATATATTTTAAAAGACTTTAAGGGAGGTTAATGCCTATTATAAAACTAGTGGGGGTGTTTGTGTTGTTTGAACAAACCTCAGGGGAGGTTAGTGTAATTTCCCCTTGTTATTAATATTGTACTAAAGTTTATGATTGTTTCATCACGCACCTATAATCAAATACTATGGTTGTCTCATTTAATATAATTCTATTATTTTGAAAATGAGAAATGGATTCTTTTGATTGCTCTACACTGCACAGCATTCATATGGGTCTGTTACTGGAGATCGATACTATGGAGCAAAGGCTACAATCAATTTGTGGGCCCCACATGTGGAAGATGAAAATGAATTCAGCTTGTCTCAAATATGGGTCCTCGCCAATGGAAATGAGAACAGTATTGAAGCTGGTTGGCAGGCATGTTAATAAATAACATACTTTTTTTTATCCATTCATTTCCCATATGCATAGATTTTTTTATCTATTTAATTAGTATATACTAATATCAATATACGTCAATAATCATGTTATAGTAATCTCACTATGCCCTTTGATTATATATGTCAATATCTCAAATTTACTTTCATGAATTACCTCACATCACATGCCCTAGTATTTCCAAAATGACTAGAGCTTTCTCCATAGTCTAATCACATAGAGATACCTTATGTTACTTATATAGATTTTTTTTAATGGGTTACTTATATAGATTAGTTATATGAAAACAAGGTTTAACTCATATAAATTGTTACATCAGTTTTTTTTAGCAAAGACGAACTTACTGCATGTCATTCATAATAGGAGAGTACATAGTAGTGGGAACAACATGGAAAACAAAGGGGCGATGATGAGATAAGACGGCTCTAGCAATACTATGAGCAATCTTATTTACTTGCCTCCTAACAAACGACACCACAAAGTCGTAAGATATTTTTACATTGAATCACAAGGTCTCCAAATTCATTGAGAGGAGTAGTAGTAGAGTAGAGTGTATTCAGCAAGGATCTACTGTCAGTTTTAAATATAACATTATGCATGCCTCCTTCGCACATCATGTGCTAGGAGGGCCTTTTGTCGTGGTAATATAATTCATTTTAGCCTCTTAAAAAAAAAACATTATGCATGCCATTGGAGATTGCCATCTTCATAGCTTCTAGCAGCCCAATGGTTTCCACTTCAAGAACAGTAGCAGAAAATTGCATGTAATCTGATTTTCCAAGTAAAAGCTGCCCCAATGAATCTCGAAAATATCTTATTTTTCTTTCAAAAATATCTAACCTAAATGCATTCTAAAGACAATGAGCATGTCAACAATATCTACCTCTTATAAGATCAGGTCATTTTTATGCAGGTGAGTCACCAGATCTACGGGGACTATCTCCCTAGAATATTCGTCTATTGGACGGTAAGTAAGTTATAAGACAAAAGTTAGGCATTTTCTTATATGTTTTTGGTGTGTGGTTCTTCGCATAACGTACGTGCTTATAACAACTAATGATTTTTCAAATCCACAATTTTCGATTCTCAAAGTTTGTTACAAAAAGTAAATTTTATGTGAAAACCATACAAGAAACAATTAAGAAAATGCATCTAAATTTTGCCCTAATTTATATTGTAACAAACGGATTAATAAATAAAATTATTAAAACGAAAATGATACTAGTAATAGTAGTAGTAGTAATTGCAGGCCAATGGATATAAAGGAACTGGATGCTACAATTTACGTTGTCCAGGCTTTGTTCAAACTAGCAAAACATTTGCACTTGGAGGTGCACTCTCTCCAGCTTCTACGTATAATGGACAACAAATTGAAATTACTTTATTAATCTATAAGGTAATTTTCTACTCAGATTACCAAATTGACTTTGGATTATGGATAATTTGGTTGATATCTCGTCTCCCTCCTCTTGTTTTTTACATTTTTTTTTCCTTCAAGAATGTGTGAATTATCAATAATAACTTCAAACGTGTAGAGACTAGAGATAAGTCAATTTGGTTAATAAAGTAAAAAATAAAAAATTGTTTTTGAAATTAACAAAATTTCAATCGTACAGTAATAATTTTTGGTATCAATAAGATTGATCTGGTATATATGTGGCTAATGTGATTGAGTTCATTCGTAAAAACTTTTGATCTCTTTCGTTTCATTAACCAGCGTCAAGAGGGCATTAATGTGTCTATGTTGATGTTTTTTTTGGCAAGAAACGATAAAATGTTAAAAAACAAATGAATCGTTAAATTGGAAGATAAAATGTTACACTATATTATTCTTTTGTACAACGTGAAAATAAGTTTTTTTTATAGTGTCATTTAAGGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGTTTTTGGTGCAGGATCAAAAAACTGGGAATTGGTGGCTTGAATATGGATCTGGCAACATAGTTGGATATTGGCCATCCTCTTTGTTCACAAGTTTAAAGGATAGTGCAACTACGGTTGAATTTGGTGGAGAAGTGTATATAAAGTCAACTGGGACACACTCATCAACCCAAATGGGTAGTGGACATTTTGCAGATGAGGGTTCTTCAAAAGCTTCATATTTTAGGGACATGCAAGTTGTGAATTCTGATAACAGGTTGATTCCATTATCAAATCTCAATGTGTATGCAACCACTACAAGAATTCCTCAAATTACTAACCAATTCAAAATTGCATTACTGAGGGATTTAGACCCTCAGTAATTACTGGCGGAAAAAGCCTTCAGTAACCAAGAAAAAACCCTCAGTAATATTACAGGCAGAATAAACCCTCAATAATACAACTAAATCCGTTACTGACAGATAAATCCGCCAGTAAAGTCATTGACGAATCTCCCTTGTAATACTAACGGATTTATTCCATCAATAATGATGGTGTATAGGACAGCTGCACATGCCATCGTATTACTGGCGGATATAATCTGTCAGTAATGTTCTGATAGAACAAAGAATCCGCCAATAATCATTCAAATCCGCAAGTAATAACATTGATTAAAAATCCGCCAGTAATGCATTATTCCGACAGTATTTGAAAAGAAAAAATCCGCCGGTAAACAAAATATTTCCGTCAGTAATGGGTTCAATTGAAAAACCCAATTATTAATTCACGTTATAATTGATTTAATTTATAATTAGAAACACATACAAAACACGCATCTGGATTCTGGGTACACGCTCGTTGAAGCATCTACCTTCATCTCATTTCTGTTCAATCGCCCAAGCATCTCAATTGTTCCTCTCTCTCTCACTCTCTCCCTCTCGTGTTGAAGAAGGAGTAAATAGCAGAAGAATGAGGGTTTGGTGCTTGGTGAAGGAGTAAAGGGCTCCTGTTCAATATTGAGGATCTGTTGAGGTGAGTTTCTTAAATTAGGTTCTAATTATAGCAAATGGGAACAGGAATTAGCAATTAGGATTAAGGAAATTGACATGCAGTTAGCAGTTTTGATTTTCCCTAATTGGATTAAGGAACTGGAATTATGGAATTAGCAATTTGAAACCCTAATAGGATTTTCCCCTTTTTGTTGTTATTAACAAAGAGATTTCAACTACACTTTGTTCTGACGAGGCCATGAGGTATAACAATATAGTTTTATCTCTTTTTAGCAATTTTAGTCTACAAAATTTTTATCATTTGTTTAATTTCGCCTGGGTTTTGTTTCATTTGTGTTTGATTATTTTGATTCTGAAGCCACTTGATGTTTATTTTTTGTTTTTCCTGCAGAATTTGTAATTTTAATTAGCGTGAATGTCACTTGGATCTCTGTTGTCAATAGCAGCCGCTACCGGCGCTATCGCGGTGCGGAGCGGCCAAATACACACTACCGCATTGCTATCGCGGCCGATTCAACATCGTGCAGATCAGAAGTTATATCATCTATGCATTAG
Protein sequence

>MS.gene96026.t1

MHCFIACLASEAGNHQLANQTFRSEGLHKLKKKIASRLKQINKPGVKTIQSPDGDIIDCVVSHKQPAFDHPLLKGQKPLDPLERSKGNNQTDILSGKFQLWSLYDESCPEGTIPIRRAKEEDILRASSIDTFGRKLSQVGADATEYKHVHSYGSVTGDRYYGAKATINLWAPHVEDENEFSLSQIWVLANGNENSIEAGWQVSHQIYGDYLPRIFVYWTANGYKGTGCYNLRCPGFVQTSKTFALGGALSPASTYNGQQIEITLLIYKDQKTGNWWLEYGSGNIVGYWPSSLFTSLKDSATTVEFGGEVYIKSTGTHSSTQMGSGHFADEGSSKASYFRDMQVVNSDNSRYRRYRGAERPNTHYRIAIAADSTSCRSEVISSMH