Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96119.t1 | KEH30741.1 | 89.4 | 889 | 40 | 2 | 1 | 835 | 250 | 1138 | 0.00E+00 | 1416.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96119.t1 | Q40392 | 34.7 | 513 | 312 | 9 | 6 | 510 | 166 | 663 | 1.9e-79 | 298.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96119.t1 | A0A072UMY5 | 89.4 | 889 | 40 | 2 | 1 | 835 | 250 | 1138 | 0.0e+00 | 1416.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05454 | MS.gene96119 | 0.808814 | 2.57E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene96119 | 0.845033 | 5.23E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 167 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACACCCTGTTCCACTTTCT+TGG | 0.092308 | 4.2:-29145186 | None:intergenic |
| TCAGGATACTTCGACTAATT+TGG | 0.105291 | 4.2:+29146888 | MS.gene96119:CDS |
| GTTCCACTTTCTTGGTTCTT+TGG | 0.149847 | 4.2:-29145178 | None:intergenic |
| ATCTTATTATTAAGTAAATT+TGG | 0.164583 | 4.2:-29146060 | None:intergenic |
| TCCACAGCATGAGCAATTTA+AGG | 0.189656 | 4.2:-29145457 | None:intergenic |
| TTCCACTTTCTTGGTTCTTT+GGG | 0.204344 | 4.2:-29145177 | None:intergenic |
| TCCATTAGCAATTAAAGTTT+TGG | 0.210741 | 4.2:+29144825 | MS.gene96119:CDS |
| TATCATGATGCCCGATTTCT+TGG | 0.220727 | 4.2:+29145855 | MS.gene96119:CDS |
| CGTGGATTTCATCCTGAAAT+TGG | 0.221484 | 4.2:+29145048 | MS.gene96119:CDS |
| CCACATTGGAATTTGAGTTT+TGG | 0.248250 | 4.2:-29146728 | None:intergenic |
| AGAACTCTTAAACCAATTTC+AGG | 0.250587 | 4.2:-29145060 | None:intergenic |
| AGTTGAACAACTGGATAAAT+TGG | 0.253405 | 4.2:+29144582 | MS.gene96119:CDS |
| GCAGGATGGTCACCTTATAT+TGG | 0.289626 | 4.2:+29146913 | MS.gene96119:CDS |
| CAAGTTCAACTGTCTAAGTT+TGG | 0.292736 | 4.2:-29146397 | None:intergenic |
| CAACATTATCAAGAACTATA+AGG | 0.295725 | 4.2:-29144555 | None:intergenic |
| CCCAAAACTTTAATTGCTAA+TGG | 0.305941 | 4.2:-29144826 | None:intergenic |
| TTAAAACCAAACCCAATATA+AGG | 0.307143 | 4.2:-29146925 | None:intergenic |
| CAGGATGGTCACCTTATATT+GGG | 0.308508 | 4.2:+29146914 | MS.gene96119:CDS |
| GCATTCCATCTCAATTAAAC+TGG | 0.309511 | 4.2:-29146532 | None:intergenic |
| TGTAGCCTTCCAATTGCATT+AGG | 0.311146 | 4.2:-29146306 | None:intergenic |
| ATTTGTGGAATGGGTGGAAT+AGG | 0.313714 | 4.2:+29144316 | MS.gene96119:CDS |
| CTCCATGCTCTCTCAAGATA+TGG | 0.325085 | 4.2:-29144663 | None:intergenic |
| AGATCTAGCAACTCAAGATT+TGG | 0.325617 | 4.2:-29145883 | None:intergenic |
| AAACCCAAGGACAGATATTA+TGG | 0.326123 | 4.2:+29144909 | MS.gene96119:CDS |
| GCAGCCACTTGGTTTGCATT+TGG | 0.328949 | 4.2:+29147131 | MS.gene96119:CDS |
| TGGATAACGCCTCAGAACTA+TGG | 0.331632 | 4.2:-29145369 | None:intergenic |
| CTTGTCTCACTTAAATTAGT+TGG | 0.332134 | 4.2:-29146859 | None:intergenic |
| GATGATGATGTTCGAGTTGT+AGG | 0.333552 | 4.2:+29144292 | MS.gene96119:CDS |
| AGGCCACAATATGCAGAGAT+TGG | 0.348571 | 4.2:+29144151 | None:intergenic |
| CAGGATACTTCGACTAATTT+GGG | 0.354195 | 4.2:+29146889 | MS.gene96119:CDS |
| GTAGCAATATCAGGCAACTA+TGG | 0.360630 | 4.2:+29145609 | MS.gene96119:CDS |
| TCCTACCTCGTAGCAATATC+AGG | 0.360863 | 4.2:+29145600 | MS.gene96119:CDS |
| CCCATTGTTCCCATACATCT+TGG | 0.363718 | 4.2:+29146970 | MS.gene96119:CDS |
| TGGTCACCTTATATTGGGTT+TGG | 0.373743 | 4.2:+29146919 | MS.gene96119:CDS |
| ATTTGGAATCTCCAAGAAAT+CGG | 0.377129 | 4.2:-29145866 | None:intergenic |
| GAGGATGTAAGTAAAATTTA+CGG | 0.379605 | 4.2:+29144406 | MS.gene96119:CDS |
| TTTCAAATCCCTAATGCAAT+TGG | 0.384030 | 4.2:+29146297 | MS.gene96119:CDS |
| CTGTGGAATTTGAATTTCTC+AGG | 0.392154 | 4.2:+29145473 | MS.gene96119:CDS |
| AAGTGAGACAAGTCAATATC+AGG | 0.392474 | 4.2:+29146870 | MS.gene96119:CDS |
| ATGAAGGATGTTGGTTGGTA+TGG | 0.404860 | 4.2:-29146144 | None:intergenic |
| GAAAGTTCCTTGATGCTAGA+AGG | 0.408234 | 4.2:-29146375 | None:intergenic |
| CTTGAGTTGCTAGATCTTGA+AGG | 0.409840 | 4.2:+29145889 | MS.gene96119:CDS |
| AAGAACCAAGAAAGTGGAAC+AGG | 0.413710 | 4.2:+29145181 | MS.gene96119:CDS |
| GCCGGATAAACTTGTTGAAC+TGG | 0.415081 | 4.2:+29145577 | MS.gene96119:CDS |
| AGAAAATATTGAAGAAATAC+AGG | 0.416407 | 4.2:+29145391 | MS.gene96119:CDS |
| CTTTAGAACTTTGTAGATGA+AGG | 0.420026 | 4.2:-29146160 | None:intergenic |
| AAAAGAACATTTGGAGATGC+TGG | 0.420678 | 4.2:+29146101 | MS.gene96119:CDS |
| CCAAGATGTATGGGAACAAT+GGG | 0.422697 | 4.2:-29146970 | None:intergenic |
| TGTTGATCAAGTTGAACAAC+TGG | 0.422897 | 4.2:+29144573 | MS.gene96119:CDS |
| GTAGCCTTCCAATTGCATTA+GGG | 0.425368 | 4.2:-29146305 | None:intergenic |
| TTGGTTTACTGGACATAGCT+TGG | 0.428673 | 4.2:+29148150 | MS.gene96119:CDS |
| ACTTTACCTAGCGATATAGT+TGG | 0.430750 | 4.2:+29144220 | MS.gene96119:CDS |
| GCCTCAGAACTATGGCTTCA+AGG | 0.433903 | 4.2:-29145361 | None:intergenic |
| CAAACTTAGACAGTTGAACT+TGG | 0.434293 | 4.2:+29146398 | MS.gene96119:CDS |
| TTATCCGGCTGAAAACTTGA+TGG | 0.434832 | 4.2:-29145563 | None:intergenic |
| TGGTTTACTGGACATAGCTT+GGG | 0.435837 | 4.2:+29148151 | MS.gene96119:CDS |
| ACAAGCGGTGGTTCTTTCTC+AGG | 0.440105 | 4.2:+29148054 | MS.gene96119:CDS |
| CCTTTCTACAAAACAATTGA+AGG | 0.441850 | 4.2:-29144729 | None:intergenic |
| GTTCGAGTTGTAGGGATTTG+TGG | 0.442675 | 4.2:+29144301 | MS.gene96119:CDS |
| CTGCCCCAGTTTAATTGAGA+TGG | 0.446694 | 4.2:+29146527 | MS.gene96119:CDS |
| ACCAGTTCAACAAGTTTATC+CGG | 0.447628 | 4.2:-29145578 | None:intergenic |
| AACATTATCAAGAACTATAA+GGG | 0.448150 | 4.2:-29144554 | None:intergenic |
| CATCCATAATATCTGTCCTT+GGG | 0.454414 | 4.2:-29144912 | None:intergenic |
| CATGATTTGTTCAAAGAACT+AGG | 0.455434 | 4.2:+29145129 | MS.gene96119:CDS |
| TTTGTGGAATGGGTGGAATA+GGG | 0.456745 | 4.2:+29144317 | MS.gene96119:CDS |
| AACTAGGCAAGAGTATCGTT+AGG | 0.463868 | 4.2:+29145145 | MS.gene96119:CDS |
| CTCAAACATCTAAATCTCTC+AGG | 0.464415 | 4.2:+29146033 | MS.gene96119:CDS |
| CAAGAAAGTGGAACAGGGTG+TGG | 0.469438 | 4.2:+29145187 | MS.gene96119:CDS |
| CATTCATAACCTGTGAGAAC+GGG | 0.469821 | 4.2:+29145094 | MS.gene96119:CDS |
| CATACATCTTGGAAAAGATC+TGG | 0.474529 | 4.2:+29146981 | MS.gene96119:CDS |
| GCCACTTGGTTTGCATTTGG+AGG | 0.476100 | 4.2:+29147134 | MS.gene96119:CDS |
| TTTGCACTCCAATCGGGCCA+TGG | 0.476979 | 4.2:-29144432 | None:intergenic |
| AGTGTACAAAGTTCGACTCT+TGG | 0.482813 | 4.2:+29144693 | MS.gene96119:CDS |
| CTTTACCTAGCGATATAGTT+GGG | 0.484075 | 4.2:+29144221 | MS.gene96119:CDS |
| AGTTGTAGGGATTTGTGGAA+TGG | 0.486328 | 4.2:+29144306 | MS.gene96119:CDS |
| CACCCAAAGAACCAAGAAAG+TGG | 0.490073 | 4.2:+29145175 | MS.gene96119:CDS |
| TGATGCTTGCTGCTTTATTG+AGG | 0.490969 | 4.2:+29144387 | MS.gene96119:CDS |
| GTGAATTGGGGTATCTCTGT+TGG | 0.494503 | 4.2:+29145516 | MS.gene96119:CDS |
| ACATCCATAATATCTGTCCT+TGG | 0.495277 | 4.2:-29144913 | None:intergenic |
| TACGGAGACCATGGCCCGAT+TGG | 0.496994 | 4.2:+29144424 | MS.gene96119:CDS |
| TGCTTAGAAATTCTAAATGT+GGG | 0.497061 | 4.2:+29146330 | MS.gene96119:CDS |
| ACTTCGACTAATTTGGGTGC+AGG | 0.498491 | 4.2:+29146895 | MS.gene96119:CDS |
| TACTCTACCTTCTAGCATCA+AGG | 0.500721 | 4.2:+29146368 | MS.gene96119:CDS |
| ACAATATCTATCTGACCCAT+TGG | 0.501240 | 4.2:-29146700 | None:intergenic |
| CAATGGATGGATCAATCTGC+TGG | 0.501781 | 4.2:-29145924 | None:intergenic |
| TTGCTTAGAAATTCTAAATG+TGG | 0.502138 | 4.2:+29146329 | MS.gene96119:CDS |
| GTTGTAGGGATTTGTGGAAT+GGG | 0.503659 | 4.2:+29144307 | MS.gene96119:CDS |
| CATTCCATCTCAATTAAACT+GGG | 0.504498 | 4.2:-29146531 | None:intergenic |
| TGAATTGGGGTATCTCTGTT+GGG | 0.506750 | 4.2:+29145517 | MS.gene96119:CDS |
| GCAGATCAGACTTTCCTGTC+AGG | 0.510433 | 4.2:+29148109 | MS.gene96119:CDS |
| TCCAAGATGTATGGGAACAA+TGG | 0.513385 | 4.2:-29146971 | None:intergenic |
| TTTGGAATCTCCAAGAAATC+GGG | 0.517891 | 4.2:-29145865 | None:intergenic |
| ACAATATTTGATGAGAGCTC+AGG | 0.522913 | 4.2:-29146447 | None:intergenic |
| TTTCCAATCTCTGCATATTG+TGG | 0.522937 | 4.2:-29144154 | None:intergenic |
| ATGATGATGTTCGAGTTGTA+GGG | 0.529673 | 4.2:+29144293 | MS.gene96119:CDS |
| CAATATCTATCTGACCCATT+GGG | 0.531283 | 4.2:-29146699 | None:intergenic |
| GTCCATATCTTGAGAGAGCA+TGG | 0.533968 | 4.2:+29144661 | MS.gene96119:CDS |
| GAACAGGGTGTGGGACTACA+AGG | 0.534502 | 4.2:+29145197 | MS.gene96119:CDS |
| AAACTTTAATTGCTAATGGA+AGG | 0.535246 | 4.2:-29144822 | None:intergenic |
| CACCGCTTGTTTCATCAAAG+TGG | 0.535940 | 4.2:-29148041 | None:intergenic |
| AATTGCTAATGGAAGGCCGT+TGG | 0.538217 | 4.2:-29144815 | None:intergenic |
| TGGTTCAACAATCAAAATGT+AGG | 0.538660 | 4.2:+29146748 | MS.gene96119:CDS |
| GTGATCCTATGTGTGAGGTT+TGG | 0.539773 | 4.2:+29147983 | MS.gene96119:CDS |
| ATGCAATCCTACCTCCCAAT+GGG | 0.540753 | 4.2:+29146685 | MS.gene96119:CDS |
| TTTCTTAAGATACCAATGGA+TGG | 0.545999 | 4.2:-29145937 | None:intergenic |
| CAGTGTTATATCAGAAAACA+TGG | 0.547684 | 4.2:+29145227 | MS.gene96119:CDS |
| CAGCAGATTGATCCATCCAT+TGG | 0.548510 | 4.2:+29145925 | MS.gene96119:CDS |
| CACGAGAATGGCTAGGCACA+GGG | 0.549463 | 4.2:+29144611 | MS.gene96119:CDS |
| ACACGAGAATGGCTAGGCAC+AGG | 0.550168 | 4.2:+29144610 | MS.gene96119:CDS |
| TTGAATCATCAAGTCCTGAC+AGG | 0.550604 | 4.2:-29148123 | None:intergenic |
| TGGACTAGAGGATACAGAAA+AGG | 0.551086 | 4.2:+29144954 | MS.gene96119:CDS |
| CATCTAATCTGATACGCACT+AGG | 0.551278 | 4.2:+29144515 | MS.gene96119:CDS |
| ACAGGAAAGTCTGATCTGCC+TGG | 0.552820 | 4.2:-29148105 | None:intergenic |
| GAGACAAAGACGTCTATGCC+AGG | 0.553630 | 4.2:+29148087 | MS.gene96119:CDS |
| TATCTGACCCATTGGGAGGT+AGG | 0.556999 | 4.2:-29146692 | None:intergenic |
| ACAGGAGATGACAACATTGA+GGG | 0.558488 | 4.2:+29145409 | MS.gene96119:CDS |
| GATGGAATGCTGTTATAGAA+TGG | 0.559831 | 4.2:+29146545 | MS.gene96119:CDS |
| GCTGTAGTTGAGCAGCCACT+TGG | 0.560201 | 4.2:+29147120 | MS.gene96119:CDS |
| ACTAGGCAAGAGTATCGTTA+GGG | 0.567235 | 4.2:+29145146 | MS.gene96119:CDS |
| AAATCCCTAATGCAATTGGA+AGG | 0.570594 | 4.2:+29146301 | MS.gene96119:CDS |
| AATTGGCTATGACACGAGAA+TGG | 0.570983 | 4.2:+29144599 | MS.gene96119:CDS |
| CAATATCAGGCAACTATGGG+AGG | 0.571746 | 4.2:+29145613 | MS.gene96119:CDS |
| ACTTTGTAGATGAAGGATGT+TGG | 0.573721 | 4.2:-29146153 | None:intergenic |
| CTTGATGGCAAACAAGTGAA+AGG | 0.580679 | 4.2:-29145548 | None:intergenic |
| TAGCAATATCAGGCAACTAT+GGG | 0.580682 | 4.2:+29145610 | MS.gene96119:CDS |
| TCATTCATAACCTGTGAGAA+CGG | 0.582202 | 4.2:+29145093 | MS.gene96119:CDS |
| AAGGGATTGCATGAAATTAG+CGG | 0.584524 | 4.2:+29147084 | MS.gene96119:intron |
| GCCTTAAATTGCTCATGCTG+TGG | 0.587602 | 4.2:+29145456 | MS.gene96119:CDS |
| TGTAGATGAAGGATGTTGGT+TGG | 0.589103 | 4.2:-29146149 | None:intergenic |
| GTAGGGATTTGTGGAATGGG+TGG | 0.591904 | 4.2:+29144310 | MS.gene96119:CDS |
| ATAAGATGTTAGAGAGACAA+AGG | 0.592328 | 4.2:+29146076 | MS.gene96119:CDS |
| CTTTCTACAAAACAATTGAA+GGG | 0.593668 | 4.2:-29144728 | None:intergenic |
| AGTAAAATTTACGGAGACCA+TGG | 0.593709 | 4.2:+29144415 | MS.gene96119:CDS |
| AAAAGTGATGATATCATGAG+TGG | 0.594376 | 4.2:+29144757 | MS.gene96119:CDS |
| CGACTAATTTGGGTGCAGGA+TGG | 0.599980 | 4.2:+29146899 | MS.gene96119:CDS |
| TACAGGAGATGACAACATTG+AGG | 0.602216 | 4.2:+29145408 | MS.gene96119:CDS |
| CTCTGAGTGGAGAAGTGCAT+TGG | 0.605341 | 4.2:+29144873 | MS.gene96119:CDS |
| TGCATCCCAACTATATCGCT+AGG | 0.609820 | 4.2:-29144226 | None:intergenic |
| AGTTGGGATGCACTCACGAG+TGG | 0.614018 | 4.2:+29144237 | MS.gene96119:CDS |
| ACCTCCAAATGCAAACCAAG+TGG | 0.614515 | 4.2:-29147135 | None:intergenic |
| CATGCAATCCTACCTCCCAA+TGG | 0.614988 | 4.2:+29146684 | MS.gene96119:CDS |
| CTTGTTTCATCAAAGTGGCG+TGG | 0.619114 | 4.2:-29148036 | None:intergenic |
| TTAGAAATTCTAAATGTGGG+AGG | 0.620675 | 4.2:+29146333 | MS.gene96119:CDS |
| TTGGATGATACAAATCCTTG+AGG | 0.620849 | 4.2:+29146575 | MS.gene96119:CDS |
| CACTTTGATGAAACAAGCGG+TGG | 0.621691 | 4.2:+29148042 | MS.gene96119:CDS |
| ACATATTGATCTCTCTCACT+CGG | 0.632159 | 4.2:+29145825 | MS.gene96119:CDS |
| GCAACTATGGGAGGGCACAA+AGG | 0.634179 | 4.2:+29145622 | MS.gene96119:CDS |
| AATATCAGGCAACTATGGGA+GGG | 0.637893 | 4.2:+29145614 | MS.gene96119:CDS |
| CCAAAACTCAAATTCCAATG+TGG | 0.642000 | 4.2:+29146728 | MS.gene96119:CDS |
| AGTGGAGAAGTGCATTGGCA+AGG | 0.643792 | 4.2:+29144878 | MS.gene96119:CDS |
| TATCTATCTGACCCATTGGG+AGG | 0.651888 | 4.2:-29146696 | None:intergenic |
| ATATGTGTCAAATTATGTAG+AGG | 0.652368 | 4.2:-29145808 | None:intergenic |
| GCCTGATATTGCTACGAGGT+AGG | 0.652441 | 4.2:-29145601 | None:intergenic |
| AGGTTTGGTATATCTCACAT+AGG | 0.654239 | 4.2:+29147998 | MS.gene96119:CDS |
| ATATACCAAACCTCACACAT+AGG | 0.655780 | 4.2:-29147988 | None:intergenic |
| CGCCACTTTGATGAAACAAG+CGG | 0.659582 | 4.2:+29148039 | MS.gene96119:CDS |
| ACCTTGAAGCCATAGTTCTG+AGG | 0.659818 | 4.2:+29145360 | MS.gene96119:CDS |
| AAGAAAGTGGAACAGGGTGT+GGG | 0.663807 | 4.2:+29145188 | MS.gene96119:CDS |
| AGAACCAAGAAAGTGGAACA+GGG | 0.664016 | 4.2:+29145182 | MS.gene96119:CDS |
| CAAGGTTAAGAGAAAACCCA+AGG | 0.668476 | 4.2:+29144896 | MS.gene96119:CDS |
| CATGACAGACGAGACAACGA+AGG | 0.670624 | 4.2:-29146240 | None:intergenic |
| GCTATGACACGAGAATGGCT+AGG | 0.682974 | 4.2:+29144604 | MS.gene96119:CDS |
| TGAAGGTGATCCTATGTGTG+AGG | 0.694267 | 4.2:+29147978 | MS.gene96119:intron |
| GATGTTCTAACATATGCCAA+CGG | 0.697450 | 4.2:+29144799 | MS.gene96119:CDS |
| ATGGTCGAGATGTCTCTGAG+TGG | 0.714083 | 4.2:+29144860 | MS.gene96119:CDS |
| ATTCCATCTCAATTAAACTG+GGG | 0.735470 | 4.2:-29146530 | None:intergenic |
| AGTTGCCTGATATTGCTACG+AGG | 0.829604 | 4.2:-29145605 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATTATTAAGTAAATT+TGG | - | chr4.2:29146063-29146082 | None:intergenic | 10.0% |
| !! | TAATACATAACTAATTTATT+TGG | + | chr4.2:29146650-29146669 | MS.gene96119:intron | 10.0% |
| !!! | ACAATTTTTCAAATTTAATT+TGG | - | chr4.2:29145968-29145987 | None:intergenic | 10.0% |
| !! | TAAATATAGACAAAAGAAAA+AGG | - | chr4.2:29146613-29146632 | None:intergenic | 15.0% |
| !! | TATATGAGTTATATAACAAA+GGG | + | chr4.2:29147066-29147085 | MS.gene96119:intron | 15.0% |
| !! | TATTAATCGATATAGAAAAA+TGG | - | chr4.2:29145285-29145304 | None:intergenic | 15.0% |
| !! | TTATATGAGTTATATAACAA+AGG | + | chr4.2:29147065-29147084 | MS.gene96119:intron | 15.0% |
| !!! | ATTAGAAAAGTTTTTGATTA+TGG | + | chr4.2:29144264-29144283 | MS.gene96119:CDS | 15.0% |
| !! | AACATTATCAAGAACTATAA+GGG | - | chr4.2:29144557-29144576 | None:intergenic | 20.0% |
| !! | AGAAAATATTGAAGAAATAC+AGG | + | chr4.2:29145391-29145410 | MS.gene96119:CDS | 20.0% |
| !! | GATTGGAAAAATTATTAAAG+AGG | + | chr4.2:29144168-29144187 | MS.gene96119:CDS | 20.0% |
| !! | TAAAAAATTGTGGTTATCAT+TGG | + | chr4.2:29147157-29147176 | MS.gene96119:intron | 20.0% |
| !! | TATTGAAAGAAGAAAGATAA+AGG | + | chr4.2:29147772-29147791 | MS.gene96119:intron | 20.0% |
| !! | TTTCAATACTTATCATATCT+TGG | - | chr4.2:29147760-29147779 | None:intergenic | 20.0% |
| !! | TTTGAAAAATTGTAGAAATC+TGG | + | chr4.2:29145975-29145994 | MS.gene96119:CDS | 20.0% |
| !!! | AATTTTCTTTCAAGTGAATT+GGG | + | chr4.2:29145503-29145522 | MS.gene96119:CDS | 20.0% |
| !!! | TGCTATAATTCTAAAAAACT+TGG | + | chr4.2:29147832-29147851 | MS.gene96119:intron | 20.0% |
| !!! | TGTATTTCTTCAATATTTTC+TGG | - | chr4.2:29145392-29145411 | None:intergenic | 20.0% |
| !!! | TTCTGAAGTAGTTTTATTTA+TGG | + | chr4.2:29147945-29147964 | MS.gene96119:intron | 20.0% |
| ! | AAACTTTAATTGCTAATGGA+AGG | - | chr4.2:29144825-29144844 | None:intergenic | 25.0% |
| ! | AAAGTATGAATTAATGCTGA+TGG | + | chr4.2:29147453-29147472 | MS.gene96119:intron | 25.0% |
| ! | ATAATCAATAAATTCTTCCC+TGG | - | chr4.2:29147046-29147065 | None:intergenic | 25.0% |
| ! | ATAGACAAAAGAAAAAGGAT+GGG | - | chr4.2:29146608-29146627 | None:intergenic | 25.0% |
| ! | ATATGTGTCAAATTATGTAG+AGG | - | chr4.2:29145811-29145830 | None:intergenic | 25.0% |
| ! | ATCAAATTGTCATGCATAAT+AGG | - | chr4.2:29146799-29146818 | None:intergenic | 25.0% |
| ! | ATCTTGGAGAAATATTATGA+GGG | + | chr4.2:29147388-29147407 | MS.gene96119:intron | 25.0% |
| ! | ATTATGCATGACAATTTGAT+AGG | + | chr4.2:29146799-29146818 | MS.gene96119:intron | 25.0% |
| ! | CAACATTATCAAGAACTATA+AGG | - | chr4.2:29144558-29144577 | None:intergenic | 25.0% |
| ! | CATCAGAAAAAGAAAAACAA+AGG | - | chr4.2:29145669-29145688 | None:intergenic | 25.0% |
| ! | CTTTCTACAAAACAATTGAA+GGG | - | chr4.2:29144731-29144750 | None:intergenic | 25.0% |
| ! | GAGGATGTAAGTAAAATTTA+CGG | + | chr4.2:29144406-29144425 | MS.gene96119:CDS | 25.0% |
| ! | TAACTAATTTATTTGGTACC+AGG | + | chr4.2:29146657-29146676 | MS.gene96119:intron | 25.0% |
| ! | TATAGACAAAAGAAAAAGGA+TGG | - | chr4.2:29146609-29146628 | None:intergenic | 25.0% |
| ! | TATCTTGGAGAAATATTATG+AGG | + | chr4.2:29147387-29147406 | MS.gene96119:intron | 25.0% |
| ! | TGCTTAGAAATTCTAAATGT+GGG | + | chr4.2:29146330-29146349 | MS.gene96119:CDS | 25.0% |
| ! | TGGTTATCATTGGATATTTA+AGG | + | chr4.2:29147167-29147186 | MS.gene96119:intron | 25.0% |
| ! | TTAAAACCAAACCCAATATA+AGG | - | chr4.2:29146928-29146947 | None:intergenic | 25.0% |
| ! | TTATCATTGGATATTTAAGG+AGG | + | chr4.2:29147170-29147189 | MS.gene96119:intron | 25.0% |
| ! | TTGCTTAGAAATTCTAAATG+TGG | + | chr4.2:29146329-29146348 | MS.gene96119:CDS | 25.0% |
| !! | AAGTTTTCTTAAGATACCAA+TGG | - | chr4.2:29145944-29145963 | None:intergenic | 25.0% |
| !! | AGTATTCCTAGCAATATTTT+TGG | + | chr4.2:29146000-29146019 | MS.gene96119:CDS | 25.0% |
| !! | CCAAAAAATGTTTTTCTTAC+TGG | - | chr4.2:29146477-29146496 | None:intergenic | 25.0% |
| !! | CCATTAGCAATTAAAGTTTT+GGG | + | chr4.2:29144826-29144845 | MS.gene96119:CDS | 25.0% |
| !! | TCAGATATGCAATCTTTTTA+TGG | + | chr4.2:29144492-29144511 | MS.gene96119:CDS | 25.0% |
| !! | TCCATTAGCAATTAAAGTTT+TGG | + | chr4.2:29144825-29144844 | MS.gene96119:CDS | 25.0% |
| !!! | AAGAAAGTTTTAGATTTTCG+TGG | + | chr4.2:29145030-29145049 | MS.gene96119:CDS | 25.0% |
| !!! | ATTTTCTTTCAAGTGAATTG+GGG | + | chr4.2:29145504-29145523 | MS.gene96119:CDS | 25.0% |
| !!! | CAATTTTCTTTCAAGTGAAT+TGG | + | chr4.2:29145502-29145521 | MS.gene96119:CDS | 25.0% |
| !!! | CCAGTAAGAAAAACATTTTT+TGG | + | chr4.2:29146474-29146493 | MS.gene96119:CDS | 25.0% |
| !!! | CGTTTTTGAAAAAACGAAAA+TGG | - | chr4.2:29146195-29146214 | None:intergenic | 25.0% |
| !!! | GTATTTCGAATTAGTTTTGA+TGG | + | chr4.2:29144934-29144953 | MS.gene96119:CDS | 25.0% |
| !!! | TCATAGTTTTAACATCCTTT+TGG | - | chr4.2:29147638-29147657 | None:intergenic | 25.0% |
| AAAAACGAAAATGGAAAGTG+CGG | - | chr4.2:29146186-29146205 | None:intergenic | 30.0% | |
| AAAAGTGATGATATCATGAG+TGG | + | chr4.2:29144757-29144776 | MS.gene96119:CDS | 30.0% | |
| AACTATGAAACCAAACTTTG+AGG | - | chr4.2:29147599-29147618 | None:intergenic | 30.0% | |
| ACAAAGGCAAAAAGAACATT+TGG | + | chr4.2:29146092-29146111 | MS.gene96119:CDS | 30.0% | |
| AGAACTCTTAAACCAATTTC+AGG | - | chr4.2:29145063-29145082 | None:intergenic | 30.0% | |
| AGATAAAGGAAAGTTCAAGA+AGG | + | chr4.2:29147786-29147805 | MS.gene96119:intron | 30.0% | |
| AGGTGAAGAAAAGACAAATA+TGG | + | chr4.2:29147906-29147925 | MS.gene96119:intron | 30.0% | |
| AGTTGAACAACTGGATAAAT+TGG | + | chr4.2:29144582-29144601 | MS.gene96119:CDS | 30.0% | |
| ATAAGATGTTAGAGAGACAA+AGG | + | chr4.2:29146076-29146095 | MS.gene96119:CDS | 30.0% | |
| ATATTTCTCCAAGATATCTC+AGG | - | chr4.2:29147383-29147402 | None:intergenic | 30.0% | |
| ATTCCATCTCAATTAAACTG+GGG | - | chr4.2:29146533-29146552 | None:intergenic | 30.0% | |
| CAGTGTTATATCAGAAAACA+TGG | + | chr4.2:29145227-29145246 | MS.gene96119:CDS | 30.0% | |
| CATTCCATCTCAATTAAACT+GGG | - | chr4.2:29146534-29146553 | None:intergenic | 30.0% | |
| CATTTGGAGGTAAAAAATTG+TGG | + | chr4.2:29147147-29147166 | MS.gene96119:intron | 30.0% | |
| CCCAAAACTTTAATTGCTAA+TGG | - | chr4.2:29144829-29144848 | None:intergenic | 30.0% | |
| CCTTTCTACAAAACAATTGA+AGG | - | chr4.2:29144732-29144751 | None:intergenic | 30.0% | |
| CTTGTCTCACTTAAATTAGT+TGG | - | chr4.2:29146862-29146881 | None:intergenic | 30.0% | |
| GAAAAAGATTGCAGAAACTT+AGG | - | chr4.2:29146281-29146300 | None:intergenic | 30.0% | |
| TAGACAAAAGAAAAAGGATG+GGG | - | chr4.2:29146607-29146626 | None:intergenic | 30.0% | |
| TGAAGAACTTCAATATTCTC+TGG | + | chr4.2:29147662-29147681 | MS.gene96119:intron | 30.0% | |
| TGATTGAAAGAGGTTAAGAA+AGG | + | chr4.2:29147703-29147722 | MS.gene96119:intron | 30.0% | |
| TGGTTCAACAATCAAAATGT+AGG | + | chr4.2:29146748-29146767 | MS.gene96119:CDS | 30.0% | |
| TTACTAACTGTAGTGAAAGA+AGG | - | chr4.2:29145723-29145742 | None:intergenic | 30.0% | |
| TTAGAAATTCTAAATGTGGG+AGG | + | chr4.2:29146333-29146352 | MS.gene96119:CDS | 30.0% | |
| TTTATGGCTACTAATTGTGA+AGG | + | chr4.2:29147961-29147980 | MS.gene96119:intron | 30.0% | |
| TTTCAAATCCCTAATGCAAT+TGG | + | chr4.2:29146297-29146316 | MS.gene96119:CDS | 30.0% | |
| TTTCACTGTACATCATATGT+GGG | - | chr4.2:29147212-29147231 | None:intergenic | 30.0% | |
| TTTCTTAAGATACCAATGGA+TGG | - | chr4.2:29145940-29145959 | None:intergenic | 30.0% | |
| ! | AATGTCATTTGCAATACTGT+AGG | + | chr4.2:29145328-29145347 | MS.gene96119:intron | 30.0% |
| ! | AGATCTTTTCCAAGATGTAT+GGG | - | chr4.2:29146982-29147001 | None:intergenic | 30.0% |
| ! | ATTTGGAATCTCCAAGAAAT+CGG | - | chr4.2:29145869-29145888 | None:intergenic | 30.0% |
| ! | TGTTTTCTGATATAACACTG+TGG | - | chr4.2:29145227-29145246 | None:intergenic | 30.0% |
| ! | TTAACTTTTGTAGCACATGA+TGG | + | chr4.2:29146835-29146854 | MS.gene96119:intron | 30.0% |
| ! | TTTTCAAAAACGCGAAGATT+CGG | + | chr4.2:29146203-29146222 | MS.gene96119:CDS | 30.0% |
| ! | TTTTCACTGTACATCATATG+TGG | - | chr4.2:29147213-29147232 | None:intergenic | 30.0% |
| !! | CACATTGGAATTTGAGTTTT+GGG | - | chr4.2:29146730-29146749 | None:intergenic | 30.0% |
| !! | CATGATTTGTTCAAAGAACT+AGG | + | chr4.2:29145129-29145148 | MS.gene96119:CDS | 30.0% |
| !! | CCTTCAATTGTTTTGTAGAA+AGG | + | chr4.2:29144729-29144748 | MS.gene96119:CDS | 30.0% |
| !! | CTTTAGAACTTTGTAGATGA+AGG | - | chr4.2:29146163-29146182 | None:intergenic | 30.0% |
| !! | GTTATAGAATGGCTTTTTCT+TGG | + | chr4.2:29146556-29146575 | MS.gene96119:CDS | 30.0% |
| !! | GTTTTGGGCTCATTTTTATA+TGG | + | chr4.2:29144841-29144860 | MS.gene96119:CDS | 30.0% |
| !! | TTTTGATTGTTGAACCACAT+TGG | - | chr4.2:29146745-29146764 | None:intergenic | 30.0% |
| !!! | AATTAGTTTTGATGGACTAG+AGG | + | chr4.2:29144942-29144961 | MS.gene96119:CDS | 30.0% |
| !!! | GGTTTTAAAAGTAAACAGCA+TGG | + | chr4.2:29146940-29146959 | MS.gene96119:CDS | 30.0% |
| !!! | GTTGCTAATTTTTTTCACCA+GGG | + | chr4.2:29147026-29147045 | MS.gene96119:intron | 30.0% |
| !!! | TGTTGCTAATTTTTTTCACC+AGG | + | chr4.2:29147025-29147044 | MS.gene96119:intron | 30.0% |
| !!! | TTTTTTGGTAGATATGTAGC+TGG | + | chr4.2:29146489-29146508 | MS.gene96119:CDS | 30.0% |
| AAAAGAACATTTGGAGATGC+TGG | + | chr4.2:29146101-29146120 | MS.gene96119:CDS | 35.0% | |
| AAACCCAAGGACAGATATTA+TGG | + | chr4.2:29144909-29144928 | MS.gene96119:CDS | 35.0% | |
| AAATCCCTAATGCAATTGGA+AGG | + | chr4.2:29146301-29146320 | MS.gene96119:CDS | 35.0% | |
| AAATGAAGCCTGAGATATCT+TGG | + | chr4.2:29147372-29147391 | MS.gene96119:intron | 35.0% | |
| AAGGGATTGCATGAAATTAG+CGG | + | chr4.2:29147084-29147103 | MS.gene96119:intron | 35.0% | |
| AAGTGAAGCTTCAATCTTTG+AGG | + | chr4.2:29147428-29147447 | MS.gene96119:intron | 35.0% | |
| AAGTGAGACAAGTCAATATC+AGG | + | chr4.2:29146870-29146889 | MS.gene96119:CDS | 35.0% | |
| ACAATATCTATCTGACCCAT+TGG | - | chr4.2:29146703-29146722 | None:intergenic | 35.0% | |
| ACAATATTTGATGAGAGCTC+AGG | - | chr4.2:29146450-29146469 | None:intergenic | 35.0% | |
| ACATATTGATCTCTCTCACT+CGG | + | chr4.2:29145825-29145844 | MS.gene96119:CDS | 35.0% | |
| ACATCCATAATATCTGTCCT+TGG | - | chr4.2:29144916-29144935 | None:intergenic | 35.0% | |
| ACCAGTTCAACAAGTTTATC+CGG | - | chr4.2:29145581-29145600 | None:intergenic | 35.0% | |
| ACTTTACCTAGCGATATAGT+TGG | + | chr4.2:29144220-29144239 | MS.gene96119:CDS | 35.0% | |
| ACTTTGTAGATGAAGGATGT+TGG | - | chr4.2:29146156-29146175 | None:intergenic | 35.0% | |
| AGATCTAGCAACTCAAGATT+TGG | - | chr4.2:29145886-29145905 | None:intergenic | 35.0% | |
| AGTAAAATTTACGGAGACCA+TGG | + | chr4.2:29144415-29144434 | MS.gene96119:CDS | 35.0% | |
| ATATACCAAACCTCACACAT+AGG | - | chr4.2:29147991-29148010 | None:intergenic | 35.0% | |
| CAAACTTAGACAGTTGAACT+TGG | + | chr4.2:29146398-29146417 | MS.gene96119:CDS | 35.0% | |
| CAAGTTCAACTGTCTAAGTT+TGG | - | chr4.2:29146400-29146419 | None:intergenic | 35.0% | |
| CAATATCTATCTGACCCATT+GGG | - | chr4.2:29146702-29146721 | None:intergenic | 35.0% | |
| CAGGATACTTCGACTAATTT+GGG | + | chr4.2:29146889-29146908 | MS.gene96119:CDS | 35.0% | |
| CATACATCTTGGAAAAGATC+TGG | + | chr4.2:29146981-29147000 | MS.gene96119:CDS | 35.0% | |
| CATCCATAATATCTGTCCTT+GGG | - | chr4.2:29144915-29144934 | None:intergenic | 35.0% | |
| CCAAAACTCAAATTCCAATG+TGG | + | chr4.2:29146728-29146747 | MS.gene96119:CDS | 35.0% | |
| CTCAAACATCTAAATCTCTC+AGG | + | chr4.2:29146033-29146052 | MS.gene96119:CDS | 35.0% | |
| CTCAGACCAAAAATATTGCT+AGG | - | chr4.2:29146009-29146028 | None:intergenic | 35.0% | |
| CTCTTTACACCTCAACAATA+TGG | - | chr4.2:29147249-29147268 | None:intergenic | 35.0% | |
| CTGTGGAATTTGAATTTCTC+AGG | + | chr4.2:29145473-29145492 | MS.gene96119:CDS | 35.0% | |
| CTTTACCTAGCGATATAGTT+GGG | + | chr4.2:29144221-29144240 | MS.gene96119:CDS | 35.0% | |
| GAAGGAGTTTGATAAGAGAA+AGG | + | chr4.2:29147804-29147823 | MS.gene96119:intron | 35.0% | |
| GATGGAATGCTGTTATAGAA+TGG | + | chr4.2:29146545-29146564 | MS.gene96119:CDS | 35.0% | |
| GATGTTCTAACATATGCCAA+CGG | + | chr4.2:29144799-29144818 | MS.gene96119:CDS | 35.0% | |
| GCATTCCATCTCAATTAAAC+TGG | - | chr4.2:29146535-29146554 | None:intergenic | 35.0% | |
| GTTACTGATCAACAAGTAGT+TGG | + | chr4.2:29147553-29147572 | MS.gene96119:intron | 35.0% | |
| TAGCAATATCAGGCAACTAT+GGG | + | chr4.2:29145610-29145629 | MS.gene96119:CDS | 35.0% | |
| TAGCCATTCAAGAATCCAAA+AGG | + | chr4.2:29147620-29147639 | MS.gene96119:intron | 35.0% | |
| TCAGGATACTTCGACTAATT+TGG | + | chr4.2:29146888-29146907 | MS.gene96119:CDS | 35.0% | |
| TCATTCATAACCTGTGAGAA+CGG | + | chr4.2:29145093-29145112 | MS.gene96119:CDS | 35.0% | |
| TGATCAACAAGTAGTTGGAA+AGG | + | chr4.2:29147558-29147577 | MS.gene96119:intron | 35.0% | |
| TTGGATATTTAAGGAGGATC+TGG | + | chr4.2:29147176-29147195 | MS.gene96119:intron | 35.0% | |
| TTGGATGATACAAATCCTTG+AGG | + | chr4.2:29146575-29146594 | MS.gene96119:CDS | 35.0% | |
| TTGTCATGCATAATAGGTGA+TGG | - | chr4.2:29146793-29146812 | None:intergenic | 35.0% | |
| TTTCCAATCTCTGCATATTG+TGG | - | chr4.2:29144157-29144176 | None:intergenic | 35.0% | |
| ! | AGGTTTGGTATATCTCACAT+AGG | + | chr4.2:29147998-29148017 | MS.gene96119:CDS | 35.0% |
| ! | CAGATCTTTTCCAAGATGTA+TGG | - | chr4.2:29146983-29147002 | None:intergenic | 35.0% |
| ! | CATCCTTTTGGATTCTTGAA+TGG | - | chr4.2:29147626-29147645 | None:intergenic | 35.0% |
| ! | TTCCACTTTCTTGGTTCTTT+GGG | - | chr4.2:29145180-29145199 | None:intergenic | 35.0% |
| ! | TTTGGAATCTCCAAGAAATC+GGG | - | chr4.2:29145868-29145887 | None:intergenic | 35.0% |
| !! | ATGATGATGTTCGAGTTGTA+GGG | + | chr4.2:29144293-29144312 | MS.gene96119:CDS | 35.0% |
| !! | CCACATTGGAATTTGAGTTT+TGG | - | chr4.2:29146731-29146750 | None:intergenic | 35.0% |
| !! | GCACAAAGGTACTATTAACA+TGG | + | chr4.2:29145636-29145655 | MS.gene96119:intron | 35.0% |
| !! | TGTTGATCAAGTTGAACAAC+TGG | + | chr4.2:29144573-29144592 | MS.gene96119:CDS | 35.0% |
| AAAAATTCTCCCGTTCTCAC+AGG | - | chr4.2:29145106-29145125 | None:intergenic | 40.0% | |
| AAATCCCAGACCTCAAAGTT+TGG | + | chr4.2:29147586-29147605 | MS.gene96119:intron | 40.0% | |
| AAGAACCAAGAAAGTGGAAC+AGG | + | chr4.2:29145181-29145200 | MS.gene96119:CDS | 40.0% | |
| AATATCAGGCAACTATGGGA+GGG | + | chr4.2:29145614-29145633 | MS.gene96119:CDS | 40.0% | |
| AATTGGCTATGACACGAGAA+TGG | + | chr4.2:29144599-29144618 | MS.gene96119:CDS | 40.0% | |
| ACAGGAGATGACAACATTGA+GGG | + | chr4.2:29145409-29145428 | MS.gene96119:CDS | 40.0% | |
| AGAACCAAGAAAGTGGAACA+GGG | + | chr4.2:29145182-29145201 | MS.gene96119:CDS | 40.0% | |
| AGGCTGCAGACAATGATAAA+TGG | - | chr4.2:29145791-29145810 | None:intergenic | 40.0% | |
| AGTGTACAAAGTTCGACTCT+TGG | + | chr4.2:29144693-29144712 | MS.gene96119:CDS | 40.0% | |
| AGTTGTAGGGATTTGTGGAA+TGG | + | chr4.2:29144306-29144325 | MS.gene96119:CDS | 40.0% | |
| ATTCACCACATGCTTTCATC+TGG | - | chr4.2:29147531-29147550 | None:intergenic | 40.0% | |
| ATTTGTGGAATGGGTGGAAT+AGG | + | chr4.2:29144316-29144335 | MS.gene96119:CDS | 40.0% | |
| CAAAAGAAAAAGGATGGGGT+AGG | - | chr4.2:29146603-29146622 | None:intergenic | 40.0% | |
| CAAGGTTAAGAGAAAACCCA+AGG | + | chr4.2:29144896-29144915 | MS.gene96119:CDS | 40.0% | |
| CAGGATGGTCACCTTATATT+GGG | + | chr4.2:29146914-29146933 | MS.gene96119:CDS | 40.0% | |
| CATCTAATCTGATACGCACT+AGG | + | chr4.2:29144515-29144534 | MS.gene96119:CDS | 40.0% | |
| CATTCATAACCTGTGAGAAC+GGG | + | chr4.2:29145094-29145113 | MS.gene96119:CDS | 40.0% | |
| CCAAGATGTATGGGAACAAT+GGG | - | chr4.2:29146973-29146992 | None:intergenic | 40.0% | |
| CGTGGATTTCATCCTGAAAT+TGG | + | chr4.2:29145048-29145067 | MS.gene96119:CDS | 40.0% | |
| GAAAGTTCCTTGATGCTAGA+AGG | - | chr4.2:29146378-29146397 | None:intergenic | 40.0% | |
| GAGATGCTTGTGATTGAAAG+AGG | + | chr4.2:29147693-29147712 | MS.gene96119:intron | 40.0% | |
| GGTGGAAAGAAGAATCAGAA+AGG | + | chr4.2:29147886-29147905 | MS.gene96119:intron | 40.0% | |
| GTAGCAATATCAGGCAACTA+TGG | + | chr4.2:29145609-29145628 | MS.gene96119:CDS | 40.0% | |
| GTAGCCTTCCAATTGCATTA+GGG | - | chr4.2:29146308-29146327 | None:intergenic | 40.0% | |
| GTTGTAGGGATTTGTGGAAT+GGG | + | chr4.2:29144307-29144326 | MS.gene96119:CDS | 40.0% | |
| TACAGGAGATGACAACATTG+AGG | + | chr4.2:29145408-29145427 | MS.gene96119:CDS | 40.0% | |
| TACTCTACCTTCTAGCATCA+AGG | + | chr4.2:29146368-29146387 | MS.gene96119:CDS | 40.0% | |
| TATCATGATGCCCGATTTCT+TGG | + | chr4.2:29145855-29145874 | MS.gene96119:CDS | 40.0% | |
| TCAACAATATGGCTGAACTG+AGG | - | chr4.2:29147238-29147257 | None:intergenic | 40.0% | |
| TCAGTTCAGCCATATTGTTG+AGG | + | chr4.2:29147237-29147256 | MS.gene96119:intron | 40.0% | |
| TCCAAGATGTATGGGAACAA+TGG | - | chr4.2:29146974-29146993 | None:intergenic | 40.0% | |
| TCCACAGCATGAGCAATTTA+AGG | - | chr4.2:29145460-29145479 | None:intergenic | 40.0% | |
| TGGTCACCTTATATTGGGTT+TGG | + | chr4.2:29146919-29146938 | MS.gene96119:CDS | 40.0% | |
| TGTAGATGAAGGATGTTGGT+TGG | - | chr4.2:29146152-29146171 | None:intergenic | 40.0% | |
| TGTAGCCTTCCAATTGCATT+AGG | - | chr4.2:29146309-29146328 | None:intergenic | 40.0% | |
| TTATCCGGCTGAAAACTTGA+TGG | - | chr4.2:29145566-29145585 | None:intergenic | 40.0% | |
| TTGAATCATCAAGTCCTGAC+AGG | - | chr4.2:29148126-29148145 | None:intergenic | 40.0% | |
| TTTGTGGAATGGGTGGAATA+GGG | + | chr4.2:29144317-29144336 | MS.gene96119:CDS | 40.0% | |
| ! | ATGAAGGATGTTGGTTGGTA+TGG | - | chr4.2:29146147-29146166 | None:intergenic | 40.0% |
| ! | CTTGAGTTGCTAGATCTTGA+AGG | + | chr4.2:29145889-29145908 | MS.gene96119:CDS | 40.0% |
| ! | CTTGATGGCAAACAAGTGAA+AGG | - | chr4.2:29145551-29145570 | None:intergenic | 40.0% |
| ! | GATGAGTGTTGTCACAAGAA+AGG | + | chr4.2:29147865-29147884 | MS.gene96119:intron | 40.0% |
| ! | GTTCCACTTTCTTGGTTCTT+TGG | - | chr4.2:29145181-29145200 | None:intergenic | 40.0% |
| ! | TGAATTGGGGTATCTCTGTT+GGG | + | chr4.2:29145517-29145536 | MS.gene96119:CDS | 40.0% |
| ! | TGGACTAGAGGATACAGAAA+AGG | + | chr4.2:29144954-29144973 | MS.gene96119:CDS | 40.0% |
| ! | TTTGCCATCAAGTTTTCAGC+CGG | + | chr4.2:29145559-29145578 | MS.gene96119:CDS | 40.0% |
| !! | AACTAGGCAAGAGTATCGTT+AGG | + | chr4.2:29145145-29145164 | MS.gene96119:CDS | 40.0% |
| !! | ACTAGGCAAGAGTATCGTTA+GGG | + | chr4.2:29145146-29145165 | MS.gene96119:CDS | 40.0% |
| !! | AGCTTGCAGTGCTTGTTATA+CGG | - | chr4.2:29147730-29147749 | None:intergenic | 40.0% |
| !! | GAAACCAAACTTTGAGGTCT+GGG | - | chr4.2:29147593-29147612 | None:intergenic | 40.0% |
| !! | GATGATGATGTTCGAGTTGT+AGG | + | chr4.2:29144292-29144311 | MS.gene96119:CDS | 40.0% |
| !! | TGAAACCAAACTTTGAGGTC+TGG | - | chr4.2:29147594-29147613 | None:intergenic | 40.0% |
| !! | TGATGCTTGCTGCTTTATTG+AGG | + | chr4.2:29144387-29144406 | MS.gene96119:CDS | 40.0% |
| !!! | AGTTGCTTTTGCACTCCAAT+CGG | - | chr4.2:29144442-29144461 | None:intergenic | 40.0% |
| AAGAAAGTGGAACAGGGTGT+GGG | + | chr4.2:29145188-29145207 | MS.gene96119:CDS | 45.0% | |
| AATTGCTAATGGAAGGCCGT+TGG | - | chr4.2:29144818-29144837 | None:intergenic | 45.0% | |
| ACCTCCAAATGCAAACCAAG+TGG | - | chr4.2:29147138-29147157 | None:intergenic | 45.0% | |
| ACTTCGACTAATTTGGGTGC+AGG | + | chr4.2:29146895-29146914 | MS.gene96119:CDS | 45.0% | |
| AGTTGCCTGATATTGCTACG+AGG | - | chr4.2:29145608-29145627 | None:intergenic | 45.0% | |
| ATGCAATCCTACCTCCCAAT+GGG | + | chr4.2:29146685-29146704 | MS.gene96119:CDS | 45.0% | |
| CAATATCAGGCAACTATGGG+AGG | + | chr4.2:29145613-29145632 | MS.gene96119:CDS | 45.0% | |
| CAATGGATGGATCAATCTGC+TGG | - | chr4.2:29145927-29145946 | None:intergenic | 45.0% | |
| CACCCAAAGAACCAAGAAAG+TGG | + | chr4.2:29145175-29145194 | MS.gene96119:CDS | 45.0% | |
| CACCGCTTGTTTCATCAAAG+TGG | - | chr4.2:29148044-29148063 | None:intergenic | 45.0% | |
| CACTTTGATGAAACAAGCGG+TGG | + | chr4.2:29148042-29148061 | MS.gene96119:CDS | 45.0% | |
| CAGCAGATTGATCCATCCAT+TGG | + | chr4.2:29145925-29145944 | MS.gene96119:CDS | 45.0% | |
| CCCATTGTTCCCATACATCT+TGG | + | chr4.2:29146970-29146989 | MS.gene96119:CDS | 45.0% | |
| CTCCATGCTCTCTCAAGATA+TGG | - | chr4.2:29144666-29144685 | None:intergenic | 45.0% | |
| CTGCCCCAGTTTAATTGAGA+TGG | + | chr4.2:29146527-29146546 | MS.gene96119:CDS | 45.0% | |
| CTTGTTTCATCAAAGTGGCG+TGG | - | chr4.2:29148039-29148058 | None:intergenic | 45.0% | |
| GCAGGATGGTCACCTTATAT+TGG | + | chr4.2:29146913-29146932 | MS.gene96119:CDS | 45.0% | |
| GCCTTAAATTGCTCATGCTG+TGG | + | chr4.2:29145456-29145475 | MS.gene96119:CDS | 45.0% | |
| GTCCATATCTTGAGAGAGCA+TGG | + | chr4.2:29144661-29144680 | MS.gene96119:CDS | 45.0% | |
| GTGATCCTATGTGTGAGGTT+TGG | + | chr4.2:29147983-29148002 | MS.gene96119:CDS | 45.0% | |
| TATCTATCTGACCCATTGGG+AGG | - | chr4.2:29146699-29146718 | None:intergenic | 45.0% | |
| TCCTACCTCGTAGCAATATC+AGG | + | chr4.2:29145600-29145619 | MS.gene96119:CDS | 45.0% | |
| TGAAGGTGATCCTATGTGTG+AGG | + | chr4.2:29147978-29147997 | MS.gene96119:intron | 45.0% | |
| TGCATCCCAACTATATCGCT+AGG | - | chr4.2:29144229-29144248 | None:intergenic | 45.0% | |
| TGGATAACGCCTCAGAACTA+TGG | - | chr4.2:29145372-29145391 | None:intergenic | 45.0% | |
| ! | ACCTTGAAGCCATAGTTCTG+AGG | + | chr4.2:29145360-29145379 | MS.gene96119:CDS | 45.0% |
| ! | CGCCACTTTGATGAAACAAG+CGG | + | chr4.2:29148039-29148058 | MS.gene96119:CDS | 45.0% |
| ! | GAGTGTTGTCACAAGAAAGG+TGG | + | chr4.2:29147868-29147887 | MS.gene96119:intron | 45.0% |
| ! | GTGAACCAGATGAAAGCATG+TGG | + | chr4.2:29147523-29147542 | MS.gene96119:intron | 45.0% |
| ! | GTGAATTGGGGTATCTCTGT+TGG | + | chr4.2:29145516-29145535 | MS.gene96119:CDS | 45.0% |
| !! | GCCGGATAAACTTGTTGAAC+TGG | + | chr4.2:29145577-29145596 | MS.gene96119:CDS | 45.0% |
| !! | GTTCGAGTTGTAGGGATTTG+TGG | + | chr4.2:29144301-29144320 | MS.gene96119:CDS | 45.0% |
| !!! | GTTGCTTTTGCACTCCAATC+GGG | - | chr4.2:29144441-29144460 | None:intergenic | 45.0% |
| ACAAGCGGTGGTTCTTTCTC+AGG | + | chr4.2:29148054-29148073 | MS.gene96119:CDS | 50.0% | |
| ACAGGAAAGTCTGATCTGCC+TGG | - | chr4.2:29148108-29148127 | None:intergenic | 50.0% | |
| ATGGTCGAGATGTCTCTGAG+TGG | + | chr4.2:29144860-29144879 | MS.gene96119:CDS | 50.0% | |
| CAAAAACGCGAAGATTCGGC+TGG | + | chr4.2:29146207-29146226 | MS.gene96119:CDS | 50.0% | |
| CAAGAAAGTGGAACAGGGTG+TGG | + | chr4.2:29145187-29145206 | MS.gene96119:CDS | 50.0% | |
| CACACCCTGTTCCACTTTCT+TGG | - | chr4.2:29145189-29145208 | None:intergenic | 50.0% | |
| CATGACAGACGAGACAACGA+AGG | - | chr4.2:29146243-29146262 | None:intergenic | 50.0% | |
| CATGCAATCCTACCTCCCAA+TGG | + | chr4.2:29146684-29146703 | MS.gene96119:CDS | 50.0% | |
| CGACTAATTTGGGTGCAGGA+TGG | + | chr4.2:29146899-29146918 | MS.gene96119:CDS | 50.0% | |
| GAGACAAAGACGTCTATGCC+AGG | + | chr4.2:29148087-29148106 | MS.gene96119:CDS | 50.0% | |
| GCAGATCAGACTTTCCTGTC+AGG | + | chr4.2:29148109-29148128 | MS.gene96119:CDS | 50.0% | |
| GCCTCAGAACTATGGCTTCA+AGG | - | chr4.2:29145364-29145383 | None:intergenic | 50.0% | |
| GCCTGATATTGCTACGAGGT+AGG | - | chr4.2:29145604-29145623 | None:intergenic | 50.0% | |
| GCTATGACACGAGAATGGCT+AGG | + | chr4.2:29144604-29144623 | MS.gene96119:CDS | 50.0% | |
| GTAGGGATTTGTGGAATGGG+TGG | + | chr4.2:29144310-29144329 | MS.gene96119:CDS | 50.0% | |
| TATCTGACCCATTGGGAGGT+AGG | - | chr4.2:29146695-29146714 | None:intergenic | 50.0% | |
| ! | AGTGGAGAAGTGCATTGGCA+AGG | + | chr4.2:29144878-29144897 | MS.gene96119:CDS | 50.0% |
| ! | CTCTGAGTGGAGAAGTGCAT+TGG | + | chr4.2:29144873-29144892 | MS.gene96119:CDS | 50.0% |
| !! | GCAGCCACTTGGTTTGCATT+TGG | + | chr4.2:29147131-29147150 | MS.gene96119:CDS | 50.0% |
| !! | GCCACTTGGTTTGCATTTGG+AGG | + | chr4.2:29147134-29147153 | MS.gene96119:CDS | 50.0% |
| ACACGAGAATGGCTAGGCAC+AGG | + | chr4.2:29144610-29144629 | MS.gene96119:CDS | 55.0% | |
| AGTTGGGATGCACTCACGAG+TGG | + | chr4.2:29144237-29144256 | MS.gene96119:CDS | 55.0% | |
| CACGAGAATGGCTAGGCACA+GGG | + | chr4.2:29144611-29144630 | MS.gene96119:CDS | 55.0% | |
| GAACAGGGTGTGGGACTACA+AGG | + | chr4.2:29145197-29145216 | MS.gene96119:CDS | 55.0% | |
| GCTGTAGTTGAGCAGCCACT+TGG | + | chr4.2:29147120-29147139 | MS.gene96119:CDS | 55.0% | |
| GGTAGGATTGCATGTGCACC+TGG | - | chr4.2:29146678-29146697 | None:intergenic | 55.0% | |
| TTTGCACTCCAATCGGGCCA+TGG | - | chr4.2:29144435-29144454 | None:intergenic | 55.0% | |
| ! | GCAACTATGGGAGGGCACAA+AGG | + | chr4.2:29145622-29145641 | MS.gene96119:CDS | 55.0% |
| AGGATGGGGTAGGCACCTCA+AGG | - | chr4.2:29146593-29146612 | None:intergenic | 60.0% | |
| TACGGAGACCATGGCCCGAT+TGG | + | chr4.2:29144424-29144443 | MS.gene96119:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 29144153 | 29148180 | 29144153 | ID=MS.gene96119 |
| chr4.2 | mRNA | 29144153 | 29148180 | 29144153 | ID=MS.gene96119.t1;Parent=MS.gene96119 |
| chr4.2 | exon | 29144153 | 29145248 | 29144153 | ID=MS.gene96119.t1.exon1;Parent=MS.gene96119.t1 |
| chr4.2 | CDS | 29144153 | 29145248 | 29144153 | ID=cds.MS.gene96119.t1;Parent=MS.gene96119.t1 |
| chr4.2 | exon | 29145350 | 29145643 | 29145350 | ID=MS.gene96119.t1.exon2;Parent=MS.gene96119.t1 |
| chr4.2 | CDS | 29145350 | 29145643 | 29145350 | ID=cds.MS.gene96119.t1;Parent=MS.gene96119.t1 |
| chr4.2 | exon | 29145808 | 29146596 | 29145808 | ID=MS.gene96119.t1.exon3;Parent=MS.gene96119.t1 |
| chr4.2 | CDS | 29145808 | 29146596 | 29145808 | ID=cds.MS.gene96119.t1;Parent=MS.gene96119.t1 |
| chr4.2 | exon | 29146679 | 29146769 | 29146679 | ID=MS.gene96119.t1.exon4;Parent=MS.gene96119.t1 |
| chr4.2 | CDS | 29146679 | 29146769 | 29146679 | ID=cds.MS.gene96119.t1;Parent=MS.gene96119.t1 |
| chr4.2 | exon | 29146848 | 29147002 | 29146848 | ID=MS.gene96119.t1.exon5;Parent=MS.gene96119.t1 |
| chr4.2 | CDS | 29146848 | 29147002 | 29146848 | ID=cds.MS.gene96119.t1;Parent=MS.gene96119.t1 |
| chr4.2 | exon | 29147087 | 29147155 | 29147087 | ID=MS.gene96119.t1.exon6;Parent=MS.gene96119.t1 |
| chr4.2 | CDS | 29147087 | 29147155 | 29147087 | ID=cds.MS.gene96119.t1;Parent=MS.gene96119.t1 |
| chr4.2 | exon | 29147983 | 29148180 | 29147983 | ID=MS.gene96119.t1.exon7;Parent=MS.gene96119.t1 |
| chr4.2 | CDS | 29147983 | 29148180 | 29147983 | ID=cds.MS.gene96119.t1;Parent=MS.gene96119.t1 |
| Gene Sequence |
| Protein sequence |
