Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96364.t1 | XP_003610050.1 | 95.9 | 343 | 7 | 2 | 1 | 338 | 91 | 431 | 1.30E-168 | 602.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96364.t1 | Q9SZH4 | 55.3 | 322 | 139 | 4 | 1 | 318 | 121 | 441 | 4.3e-85 | 316.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96364.t1 | G7JUA2 | 95.9 | 343 | 7 | 2 | 1 | 338 | 91 | 431 | 9.1e-169 | 602.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060352 | MS.gene96364 | 0.810194 | 1.30E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96364.t1 | MTR_4g127380 | 95.918 | 343 | 7 | 2 | 1 | 338 | 91 | 431 | 0.0 | 650 |
| MS.gene96364.t1 | MTR_2g038020 | 68.732 | 355 | 93 | 4 | 1 | 338 | 117 | 470 | 5.39e-153 | 438 |
| MS.gene96364.t1 | MTR_7g115340 | 38.889 | 306 | 157 | 9 | 1 | 287 | 94 | 388 | 1.42e-59 | 198 |
| MS.gene96364.t1 | MTR_7g115340 | 38.562 | 306 | 158 | 9 | 1 | 287 | 162 | 456 | 4.03e-59 | 198 |
| MS.gene96364.t1 | MTR_1g070380 | 38.411 | 302 | 165 | 8 | 1 | 287 | 212 | 507 | 3.67e-50 | 176 |
| MS.gene96364.t1 | MTR_1g070380 | 38.614 | 303 | 164 | 9 | 1 | 287 | 212 | 508 | 5.00e-49 | 172 |
| MS.gene96364.t1 | MTR_4g093650 | 38.843 | 121 | 67 | 4 | 1 | 119 | 69 | 184 | 7.89e-12 | 66.6 |
| MS.gene96364.t1 | MTR_4g093650 | 23.418 | 316 | 200 | 7 | 1 | 289 | 313 | 613 | 9.33e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96364.t1 | AT4G26000 | 55.590 | 322 | 138 | 4 | 1 | 318 | 121 | 441 | 1.16e-115 | 344 |
| MS.gene96364.t1 | AT3G04610 | 37.466 | 363 | 176 | 15 | 1 | 335 | 210 | 549 | 3.35e-57 | 194 |
| MS.gene96364.t1 | AT3G04610 | 37.466 | 363 | 176 | 15 | 1 | 335 | 210 | 549 | 3.35e-57 | 194 |
| MS.gene96364.t1 | AT3G04610 | 37.466 | 363 | 176 | 15 | 1 | 335 | 234 | 573 | 6.27e-57 | 194 |
| MS.gene96364.t1 | AT3G04610 | 37.466 | 363 | 176 | 15 | 1 | 335 | 234 | 573 | 6.27e-57 | 194 |
Find 93 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATTCTTCTTCTATTTC+TGG | 0.084837 | 8.1:+5576711 | MS.gene96364:CDS |
| CGGGCACCTGAGAAAGTTTC+TGG | 0.186233 | 8.1:+5576271 | MS.gene96364:CDS |
| ATTATGTTCCATCCGTTTAT+TGG | 0.261169 | 8.1:+5574967 | MS.gene96364:CDS |
| GAAATCATTGTGGAAATAAA+AGG | 0.265148 | 8.1:+5577129 | MS.gene96364:CDS |
| GAGGTCTTCTTACTCTCAAC+TGG | 0.283450 | 8.1:+5578585 | MS.gene96364:CDS |
| TATTTCTGGTCTTCGTTCTT+CGG | 0.294141 | 8.1:+5576725 | MS.gene96364:CDS |
| CTGCAATGGATGCTATTCTT+AGG | 0.299073 | 8.1:+5574879 | MS.gene96364:CDS |
| TACAATGGGTACGGATCTTC+TGG | 0.329461 | 8.1:+5578634 | MS.gene96364:CDS |
| CTTGAAGGTTCTTAAAGCTT+TGG | 0.331020 | 8.1:+5576238 | MS.gene96364:CDS |
| TCCTATGCAGAGGACATAAT+TGG | 0.332684 | 8.1:+5577027 | MS.gene96364:CDS |
| TGTATTATTGTCATCAGTTT+CGG | 0.338267 | 8.1:-5574927 | None:intergenic |
| AACAGCACAACAATTGATTC+AGG | 0.346155 | 8.1:+5577170 | MS.gene96364:CDS |
| AGGCATCTGTCTGACGGTCT+TGG | 0.349973 | 8.1:-5576542 | None:intergenic |
| CAAAGCTTTAAGAACCTTCA+AGG | 0.362867 | 8.1:-5576237 | None:intergenic |
| AGCAATAGTTTCATTGTGAT+TGG | 0.368603 | 8.1:-5578533 | None:intergenic |
| CTCCTCAATTAAAGCTATAC+AGG | 0.370965 | 8.1:+5575030 | MS.gene96364:CDS |
| TCCTCGACAATGTCATTGTA+TGG | 0.391211 | 8.1:+5576687 | MS.gene96364:CDS |
| TGCTGATCGTGAAAGTCAAT+TGG | 0.394247 | 8.1:+5576650 | MS.gene96364:CDS |
| GGCATCTGTCTGACGGTCTT+GGG | 0.398994 | 8.1:-5576541 | None:intergenic |
| GACAATAATACAGCAGCTGC+AGG | 0.418793 | 8.1:+5574938 | MS.gene96364:CDS |
| TATTTCCACAATGATTTCAT+CGG | 0.420763 | 8.1:-5577124 | None:intergenic |
| GTCATCAGTTTCGGATAATC+CGG | 0.421364 | 8.1:-5574918 | None:intergenic |
| GGGTACGGATCTTCTGGTCC+TGG | 0.423027 | 8.1:+5578640 | MS.gene96364:CDS |
| ATTGTTGTGCTGTTTGAACT+TGG | 0.437277 | 8.1:-5577161 | None:intergenic |
| ACGCAAGCTATCAATTTGAT+AGG | 0.447582 | 8.1:+5574998 | MS.gene96364:CDS |
| GGTACGGATCTTCTGGTCCT+GGG | 0.451797 | 8.1:+5578641 | MS.gene96364:CDS |
| GAATCCCTCTTTGTAGAAAG+AGG | 0.454799 | 8.1:-5576621 | None:intergenic |
| TATTGACTGTGCAGGAGAGC+AGG | 0.456428 | 8.1:+5577097 | MS.gene96364:CDS |
| ATTTCCACAATGATTTCATC+GGG | 0.456878 | 8.1:-5577123 | None:intergenic |
| GCGTTGACGCCACCAATAAA+CGG | 0.457916 | 8.1:-5574979 | None:intergenic |
| CTAAGAATAGCATCCATTGC+AGG | 0.462092 | 8.1:-5574878 | None:intergenic |
| GAGGACATAATTGGTATTCA+AGG | 0.466526 | 8.1:+5577036 | MS.gene96364:CDS |
| TGCTGTTTGAACTTGGGTGG+AGG | 0.485466 | 8.1:-5577154 | None:intergenic |
| TGAAAGGATTATTGAACTGC+AGG | 0.485902 | 8.1:+5576208 | MS.gene96364:CDS |
| AGAAGATCCGTACCCATTGT+AGG | 0.486067 | 8.1:-5578632 | None:intergenic |
| TATATCGGGAAAAGAGGATC+TGG | 0.486264 | 8.1:+5574841 | MS.gene96364:CDS |
| ATGTTCCATCCGTTTATTGG+TGG | 0.486807 | 8.1:+5574970 | MS.gene96364:CDS |
| AAGCTTTGGAAGCCGTAGTC+GGG | 0.495879 | 8.1:+5576252 | MS.gene96364:CDS |
| TTCCTGTATAGCTTTAATTG+AGG | 0.497575 | 8.1:-5575032 | None:intergenic |
| CATTCCTCTTTCTACAAAGA+GGG | 0.498315 | 8.1:+5576617 | MS.gene96364:CDS |
| ATCCATCACAACCCTACAAT+GGG | 0.499788 | 8.1:+5578620 | MS.gene96364:CDS |
| TCATCGGCACCGACATAAGA+TGG | 0.505569 | 8.1:-5576188 | None:intergenic |
| TATCAACCAGAAACTTTCTC+AGG | 0.507569 | 8.1:-5576277 | None:intergenic |
| CTTTCTCAGGTGCCCGACTA+CGG | 0.516009 | 8.1:-5576264 | None:intergenic |
| GGTGCTTATATCGGGAAAAG+AGG | 0.518954 | 8.1:+5574835 | None:intergenic |
| AAAGCTATACAGGAAAATAC+AGG | 0.520447 | 8.1:+5575040 | MS.gene96364:CDS |
| GGAATGTCAGCAACAATGCT+AGG | 0.523562 | 8.1:-5576600 | None:intergenic |
| CTTATGTCGGTGCCGATGAA+AGG | 0.529816 | 8.1:+5576192 | MS.gene96364:CDS |
| CGAGATTAGACACGGGGCTG+AGG | 0.532961 | 8.1:+5578566 | MS.gene96364:CDS |
| TTGTGCTGTTTGAACTTGGG+TGG | 0.535739 | 8.1:-5577157 | None:intergenic |
| CAGTTCAATAATCCTTTCAT+CGG | 0.536800 | 8.1:-5576204 | None:intergenic |
| TTGTTGTGCTGTTTGAACTT+GGG | 0.538146 | 8.1:-5577160 | None:intergenic |
| ACTACATTCGTCGCACTAGT+GGG | 0.538673 | 8.1:+5577070 | MS.gene96364:CDS |
| GGCACCGCTCTCTCCTGCAA+TGG | 0.541435 | 8.1:+5574865 | MS.gene96364:CDS |
| AAGACCGTCAGACAGATGCC+TGG | 0.542564 | 8.1:+5576544 | MS.gene96364:CDS |
| AAAGCTTTGGAAGCCGTAGT+CGG | 0.546763 | 8.1:+5576251 | MS.gene96364:CDS |
| TAGTGATGGTTTGTCAGCCC+AGG | 0.549218 | 8.1:-5576562 | None:intergenic |
| CAATAATACAGCAGCTGCAG+GGG | 0.554552 | 8.1:+5574940 | MS.gene96364:CDS |
| TACCCATTGTAGGGTTGTGA+TGG | 0.554576 | 8.1:-5578622 | None:intergenic |
| TGGGGCTATATTGACTGTGC+AGG | 0.554586 | 8.1:+5577089 | MS.gene96364:CDS |
| TGTAGTAACAATGGAAGCAC+TGG | 0.556455 | 8.1:-5576760 | None:intergenic |
| GACTACATTCGTCGCACTAG+TGG | 0.557334 | 8.1:+5577069 | MS.gene96364:CDS |
| AGACCGTCAGACAGATGCCT+GGG | 0.560346 | 8.1:+5576545 | MS.gene96364:CDS |
| ACATTCCTCTTTCTACAAAG+AGG | 0.562677 | 8.1:+5576616 | MS.gene96364:CDS |
| ACCAATTATGTCCTCTGCAT+AGG | 0.567480 | 8.1:-5577028 | None:intergenic |
| ACTGCAGGGAGAAACCTTGA+AGG | 0.570592 | 8.1:+5576223 | MS.gene96364:CDS |
| CAGCCCAGGCATCTGTCTGA+CGG | 0.571416 | 8.1:-5576548 | None:intergenic |
| GAAGATCCGTACCCATTGTA+GGG | 0.578511 | 8.1:-5578631 | None:intergenic |
| ATTGACTGTGCAGGAGAGCA+GGG | 0.578791 | 8.1:+5577098 | MS.gene96364:CDS |
| TGCGAAGCACTATGTAGTGA+TGG | 0.579277 | 8.1:-5576576 | None:intergenic |
| TATCCATCACAACCCTACAA+TGG | 0.583759 | 8.1:+5578619 | MS.gene96364:CDS |
| ACAATAATACAGCAGCTGCA+GGG | 0.584620 | 8.1:+5574939 | MS.gene96364:CDS |
| GTTGCTTACTGTAGTAACAA+TGG | 0.588635 | 8.1:-5576769 | None:intergenic |
| TCACAACCCTACAATGGGTA+CGG | 0.591745 | 8.1:+5578625 | MS.gene96364:CDS |
| ATTGTAGGGTTGTGATGGAT+AGG | 0.598593 | 8.1:-5578617 | None:intergenic |
| AGGACATAATTGGTATTCAA+GGG | 0.609523 | 8.1:+5577037 | MS.gene96364:CDS |
| TGACGCCACCAATAAACGGA+TGG | 0.614112 | 8.1:-5574975 | None:intergenic |
| ATCAATTTGATAGGAAAACA+AGG | 0.615075 | 8.1:+5575007 | MS.gene96364:CDS |
| GTACGGATCTTCTGGTCCTG+GGG | 0.618851 | 8.1:+5578642 | MS.gene96364:CDS |
| AGGTCTTCTTACTCTCAACT+GGG | 0.621753 | 8.1:+5578586 | MS.gene96364:CDS |
| ATCGGGAAAAGAGGATCTGG+AGG | 0.631561 | 8.1:+5574844 | MS.gene96364:CDS |
| CTGAAAGTACTATAATCCCC+AGG | 0.631671 | 8.1:-5578658 | None:intergenic |
| ATGTCCTCTGCATAGGACAA+TGG | 0.635631 | 8.1:-5577021 | None:intergenic |
| GCATCCATTGCAGGAGAGAG+CGG | 0.649701 | 8.1:-5574869 | None:intergenic |
| GACGAACTTCCATCTTATGT+CGG | 0.649709 | 8.1:+5576179 | MS.gene96364:intron |
| AATACCATTGTCCTATGCAG+AGG | 0.651307 | 8.1:+5577017 | MS.gene96364:CDS |
| GAAAGGATTATTGAACTGCA+GGG | 0.652230 | 8.1:+5576209 | MS.gene96364:CDS |
| TCCATACAATGACATTGTCG+AGG | 0.654769 | 8.1:-5576688 | None:intergenic |
| CTACATTCGTCGCACTAGTG+GGG | 0.658236 | 8.1:+5577071 | MS.gene96364:CDS |
| TAGTTATGCGAGATTAGACA+CGG | 0.659164 | 8.1:+5578558 | MS.gene96364:CDS |
| GGTGCCCGATGAAATCATTG+TGG | 0.669606 | 8.1:+5577119 | MS.gene96364:CDS |
| AGTTATGCGAGATTAGACAC+GGG | 0.692668 | 8.1:+5578559 | MS.gene96364:CDS |
| GTTATGCGAGATTAGACACG+GGG | 0.746440 | 8.1:+5578560 | MS.gene96364:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATCTACTTTAATTATA+GGG | + | chr8.1:5577527-5577546 | MS.gene96364:intron | 10.0% |
| !! | TATTAATCTACTTTAATTAT+AGG | + | chr8.1:5577526-5577545 | MS.gene96364:intron | 10.0% |
| !!! | ATGAAATATATTTTAACTAT+TGG | + | chr8.1:5575175-5575194 | MS.gene96364:intron | 10.0% |
| !! | ATTATATATACAATTGTTTC+TGG | + | chr8.1:5578240-5578259 | MS.gene96364:intron | 15.0% |
| !! | GACTAAAAATAAGTAATTAA+AGG | + | chr8.1:5577482-5577501 | MS.gene96364:intron | 15.0% |
| !! | TATAACAAATGAAATGAATA+TGG | - | chr8.1:5577896-5577915 | None:intergenic | 15.0% |
| !! | TGAAAAATAAGAAATAAATC+AGG | - | chr8.1:5578367-5578386 | None:intergenic | 15.0% |
| !! | TGCTAACAAATTTATAATTA+GGG | - | chr8.1:5575466-5575485 | None:intergenic | 15.0% |
| !! | TTGCTAACAAATTTATAATT+AGG | - | chr8.1:5575467-5575486 | None:intergenic | 15.0% |
| !! | TTTGAGCTTAATTAAAAATT+TGG | - | chr8.1:5576348-5576367 | None:intergenic | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAT+GGG | - | chr8.1:5578009-5578028 | None:intergenic | 15.0% |
| !!! | TATTTTGAGAAAAAGAAAAA+TGG | - | chr8.1:5578010-5578029 | None:intergenic | 15.0% |
| !!! | TTCATTTTATTTTATGTTTG+TGG | + | chr8.1:5575768-5575787 | MS.gene96364:intron | 15.0% |
| !! | AAACATATAACCATTATGTT+TGG | + | chr8.1:5577704-5577723 | MS.gene96364:intron | 20.0% |
| !! | AAGTTGAATGAAATTCAATA+GGG | - | chr8.1:5578082-5578101 | None:intergenic | 20.0% |
| !! | AATCATTAGAGAGAAAATTA+GGG | + | chr8.1:5575821-5575840 | MS.gene96364:intron | 20.0% |
| !! | AATTATGATACACGATTATT+TGG | - | chr8.1:5576880-5576899 | None:intergenic | 20.0% |
| !! | AATTCAATAGGGTATAATAA+TGG | - | chr8.1:5578071-5578090 | None:intergenic | 20.0% |
| !! | AGTACAAATATATTTGTTCA+TGG | - | chr8.1:5576842-5576861 | None:intergenic | 20.0% |
| !! | ATTCAATAGGGTATAATAAT+GGG | - | chr8.1:5578070-5578089 | None:intergenic | 20.0% |
| !! | GCTAACAAATTTATAATTAG+GGG | - | chr8.1:5575465-5575484 | None:intergenic | 20.0% |
| !! | TCAAGAAGAATTATACTAAT+TGG | + | chr8.1:5577433-5577452 | MS.gene96364:intron | 20.0% |
| !! | TCAATACCAAAAAAAGTAAA+AGG | - | chr8.1:5577235-5577254 | None:intergenic | 20.0% |
| !! | TTGAATTTCACAAACAAATT+AGG | - | chr8.1:5575506-5575525 | None:intergenic | 20.0% |
| !!! | AGAAAAAAGTTCAATTTTTC+TGG | + | chr8.1:5577208-5577227 | MS.gene96364:intron | 20.0% |
| !!! | ATATTTTAACTATTGGTGTT+TGG | + | chr8.1:5575182-5575201 | MS.gene96364:intron | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | - | chr8.1:5578161-5578180 | None:intergenic | 20.0% |
| !!! | GCTGTTTTTTTAATCAATTA+AGG | + | chr8.1:5578307-5578326 | MS.gene96364:intron | 20.0% |
| !!! | GTTAAATTGCAACATTATTT+TGG | + | chr8.1:5576395-5576414 | MS.gene96364:intron | 20.0% |
| !!! | TAAGTTGAATGAAATTCAAT+AGG | - | chr8.1:5578083-5578102 | None:intergenic | 20.0% |
| ! | AAACGACTATTATTTAGAGA+CGG | + | chr8.1:5578210-5578229 | MS.gene96364:intron | 25.0% |
| ! | AAATTGAATAAGTCTTACCT+TGG | - | chr8.1:5577818-5577837 | None:intergenic | 25.0% |
| ! | AACATGAACTAATTACTTGA+GGG | - | chr8.1:5578446-5578465 | None:intergenic | 25.0% |
| ! | AATAAATCGACATGAATCAT+GGG | - | chr8.1:5576966-5576985 | None:intergenic | 25.0% |
| ! | AATACTTCTATAAACTTACC+CGG | + | chr8.1:5577610-5577629 | MS.gene96364:intron | 25.0% |
| ! | AATGAAAACTCATTCTTTGA+AGG | - | chr8.1:5575754-5575773 | None:intergenic | 25.0% |
| ! | ACAATGAAATCAGAAAAAGA+TGG | - | chr8.1:5576457-5576476 | None:intergenic | 25.0% |
| ! | AGAAAAAGAAAAATGGGTAA+AGG | - | chr8.1:5578003-5578022 | None:intergenic | 25.0% |
| ! | ATAAACATGTCTAATCGTAA+TGG | - | chr8.1:5575397-5575416 | None:intergenic | 25.0% |
| ! | ATACAACAGAAGAAAAGATT+AGG | + | chr8.1:5575793-5575812 | MS.gene96364:intron | 25.0% |
| ! | ATATGTTTCCAAAAACCAAA+AGG | - | chr8.1:5577692-5577711 | None:intergenic | 25.0% |
| ! | ATATTTGTTCATGGTAACAA+TGG | - | chr8.1:5576833-5576852 | None:intergenic | 25.0% |
| ! | ATCAATTTGATAGGAAAACA+AGG | + | chr8.1:5575007-5575026 | MS.gene96364:CDS | 25.0% |
| ! | CAATCATTAGAGAGAAAATT+AGG | + | chr8.1:5575820-5575839 | MS.gene96364:intron | 25.0% |
| ! | CTCTAAATAATAGTCGTTTA+AGG | - | chr8.1:5578209-5578228 | None:intergenic | 25.0% |
| ! | CTTTGAATCAACACAATAAA+GGG | + | chr8.1:5576056-5576075 | MS.gene96364:intron | 25.0% |
| ! | GAAAAAGAAAAATGGGTAAA+GGG | - | chr8.1:5578002-5578021 | None:intergenic | 25.0% |
| ! | GAAATCATTGTGGAAATAAA+AGG | + | chr8.1:5577129-5577148 | MS.gene96364:CDS | 25.0% |
| ! | GAGAAATCTTGAAAAACTAA+AGG | + | chr8.1:5576014-5576033 | MS.gene96364:intron | 25.0% |
| ! | GTGGAATATACTTGAAATAA+GGG | + | chr8.1:5575227-5575246 | MS.gene96364:intron | 25.0% |
| ! | TAATTCTTCTTGAGAAAACA+AGG | - | chr8.1:5577426-5577445 | None:intergenic | 25.0% |
| ! | TACTTTAATTATAGGGAAGT+AGG | + | chr8.1:5577534-5577553 | MS.gene96364:intron | 25.0% |
| ! | TATTTCCACAATGATTTCAT+CGG | - | chr8.1:5577127-5577146 | None:intergenic | 25.0% |
| ! | TATTTGTTCATGGTAACAAT+GGG | - | chr8.1:5576832-5576851 | None:intergenic | 25.0% |
| ! | TCTTTGAATCAACACAATAA+AGG | + | chr8.1:5576055-5576074 | MS.gene96364:intron | 25.0% |
| ! | TGCACTTAAACAAAAAACAA+AGG | - | chr8.1:5576509-5576528 | None:intergenic | 25.0% |
| ! | TGTATTATTGTCATCAGTTT+CGG | - | chr8.1:5574930-5574949 | None:intergenic | 25.0% |
| ! | TGTGGAATATACTTGAAATA+AGG | + | chr8.1:5575226-5575245 | MS.gene96364:intron | 25.0% |
| ! | TTCTCTCATTGTAGATAATT+AGG | + | chr8.1:5575892-5575911 | MS.gene96364:intron | 25.0% |
| ! | TTTGAAGGAAAATAAAAGCA+GGG | - | chr8.1:5575739-5575758 | None:intergenic | 25.0% |
| !! | AACTTACAGTTTTCTCAAAT+AGG | - | chr8.1:5576316-5576335 | None:intergenic | 25.0% |
| !! | ACTTACAGTTTTCTCAAATA+GGG | - | chr8.1:5576315-5576334 | None:intergenic | 25.0% |
| !! | AGGATTTTTAAACGTATATC+CGG | + | chr8.1:5574899-5574918 | MS.gene96364:CDS | 25.0% |
| !!! | AAATCATTTTGACATTTGAC+TGG | + | chr8.1:5578410-5578429 | MS.gene96364:intron | 25.0% |
| !!! | AATATTTGCAGTGCATTTTT+TGG | + | chr8.1:5576112-5576131 | MS.gene96364:intron | 25.0% |
| !!! | AATCATTTTGACATTTGACT+GGG | + | chr8.1:5578411-5578430 | MS.gene96364:intron | 25.0% |
| !!! | ATATTTGCAGTGCATTTTTT+GGG | + | chr8.1:5576113-5576132 | MS.gene96364:intron | 25.0% |
| !!! | ATCAAGTACACTTTTGTTTA+TGG | + | chr8.1:5578479-5578498 | MS.gene96364:intron | 25.0% |
| !!! | ATTTATCAAGTGTTTTTGCA+AGG | + | chr8.1:5576900-5576919 | MS.gene96364:intron | 25.0% |
| !!! | CATTTTTTGGGTTAAATGAT+GGG | + | chr8.1:5576125-5576144 | MS.gene96364:intron | 25.0% |
| !!! | TGTTGTTATTAGAGTTTTGT+CGG | + | chr8.1:5575063-5575082 | MS.gene96364:CDS | 25.0% |
| AAAGCTATACAGGAAAATAC+AGG | + | chr8.1:5575040-5575059 | MS.gene96364:CDS | 30.0% | |
| AATTTATAATTAGGGGAGAG+AGG | - | chr8.1:5575458-5575477 | None:intergenic | 30.0% | |
| ACGATTATTTGGTAAACTGA+TGG | - | chr8.1:5576869-5576888 | None:intergenic | 30.0% | |
| ACTAAATACATTTACGCCTA+CGG | - | chr8.1:5577367-5577386 | None:intergenic | 30.0% | |
| ACTTAAAAGTGAATCTAAGG+TGG | - | chr8.1:5575606-5575625 | None:intergenic | 30.0% | |
| AGCAATAGTTTCATTGTGAT+TGG | - | chr8.1:5578536-5578555 | None:intergenic | 30.0% | |
| AGGACATAATTGGTATTCAA+GGG | + | chr8.1:5577037-5577056 | MS.gene96364:CDS | 30.0% | |
| AGGCTTATGTACGATTATTA+AGG | - | chr8.1:5578189-5578208 | None:intergenic | 30.0% | |
| ATACTTCTATAAACTTACCC+GGG | + | chr8.1:5577611-5577630 | MS.gene96364:intron | 30.0% | |
| ATTAAAAAAACAGCCAGCAT+AGG | - | chr8.1:5578301-5578320 | None:intergenic | 30.0% | |
| ATTAGGCATACAATCTTATG+CGG | + | chr8.1:5575909-5575928 | MS.gene96364:intron | 30.0% | |
| ATTATGTTCCATCCGTTTAT+TGG | + | chr8.1:5574967-5574986 | MS.gene96364:CDS | 30.0% | |
| ATTGTTTGTATCACCTGATA+GGG | - | chr8.1:5576994-5577013 | None:intergenic | 30.0% | |
| ATTTATAATTAGGGGAGAGA+GGG | - | chr8.1:5575457-5575476 | None:intergenic | 30.0% | |
| ATTTCCACAATGATTTCATC+GGG | - | chr8.1:5577126-5577145 | None:intergenic | 30.0% | |
| CAACATGAACTAATTACTTG+AGG | - | chr8.1:5578447-5578466 | None:intergenic | 30.0% | |
| CAAGATTCTTCTTCTATTTC+TGG | + | chr8.1:5576711-5576730 | MS.gene96364:CDS | 30.0% | |
| CAATAAATCGACATGAATCA+TGG | - | chr8.1:5576967-5576986 | None:intergenic | 30.0% | |
| CACTGAAATTGGAAATTCAA+GGG | + | chr8.1:5575643-5575662 | MS.gene96364:intron | 30.0% | |
| CAGTTCAATAATCCTTTCAT+CGG | - | chr8.1:5576207-5576226 | None:intergenic | 30.0% | |
| GAATTGTCTTTCTTTGTTAC+AGG | + | chr8.1:5578501-5578520 | MS.gene96364:intron | 30.0% | |
| GATTCAAAGACATTGTTTAC+TGG | - | chr8.1:5576045-5576064 | None:intergenic | 30.0% | |
| TCACTGAAATTGGAAATTCA+AGG | + | chr8.1:5575642-5575661 | MS.gene96364:intron | 30.0% | |
| TCCTTATTAATTGTAGTCAG+TGG | - | chr8.1:5578112-5578131 | None:intergenic | 30.0% | |
| TGCACTTAAAAGTGAATCTA+AGG | - | chr8.1:5575609-5575628 | None:intergenic | 30.0% | |
| ! | CAGAGAAAAAAAAGCTCTAA+AGG | - | chr8.1:5577776-5577795 | None:intergenic | 30.0% |
| ! | CTTACAGTTTTCTCAAATAG+GGG | - | chr8.1:5576314-5576333 | None:intergenic | 30.0% |
| ! | CTTTGAAGGAAAATAAAAGC+AGG | - | chr8.1:5575740-5575759 | None:intergenic | 30.0% |
| ! | TCCACTGACTACAATTAATA+AGG | + | chr8.1:5578108-5578127 | MS.gene96364:intron | 30.0% |
| ! | TGAATTTTGCTCACTGAAAT+TGG | + | chr8.1:5575632-5575651 | MS.gene96364:intron | 30.0% |
| !! | GTTGTTATTAGAGTTTTGTC+GGG | + | chr8.1:5575064-5575083 | MS.gene96364:CDS | 30.0% |
| !! | TTCCTGTATAGCTTTAATTG+AGG | - | chr8.1:5575035-5575054 | None:intergenic | 30.0% |
| !! | TTTGTTGTTCAAGTGAGAAA+GGG | - | chr8.1:5575677-5575696 | None:intergenic | 30.0% |
| !!! | CTTTTTTTTCTCTGATGGAT+TGG | + | chr8.1:5577782-5577801 | MS.gene96364:intron | 30.0% |
| !!! | GCATTTTTTGGGTTAAATGA+TGG | + | chr8.1:5576124-5576143 | MS.gene96364:intron | 30.0% |
| !!! | TAGAGCTTTTTTTTCTCTGA+TGG | + | chr8.1:5577777-5577796 | MS.gene96364:intron | 30.0% |
| !!! | TCTGGTCCTTTTACTTTTTT+TGG | + | chr8.1:5577226-5577245 | MS.gene96364:intron | 30.0% |
| AAAGGGACAATTATTGTGAG+AGG | - | chr8.1:5577985-5578004 | None:intergenic | 35.0% | |
| AAATGAAGACAGTCAGACAA+AGG | + | chr8.1:5577564-5577583 | MS.gene96364:intron | 35.0% | |
| AAATGAATATGGCAAAGAGC+TGG | - | chr8.1:5577885-5577904 | None:intergenic | 35.0% | |
| AAGGAAAATAAAAGCAGGGA+CGG | - | chr8.1:5575735-5575754 | None:intergenic | 35.0% | |
| AAGGGACAATTATTGTGAGA+GGG | - | chr8.1:5577984-5578003 | None:intergenic | 35.0% | |
| AATGAATATGGCAAAGAGCT+GGG | - | chr8.1:5577884-5577903 | None:intergenic | 35.0% | |
| ACAAATTAGGCTCAAAAGAG+AGG | - | chr8.1:5575493-5575512 | None:intergenic | 35.0% | |
| ACATGTCTAATCGTAATGGT+AGG | - | chr8.1:5575393-5575412 | None:intergenic | 35.0% | |
| ACATTCCTCTTTCTACAAAG+AGG | + | chr8.1:5576616-5576635 | MS.gene96364:CDS | 35.0% | |
| ACGCAAGCTATCAATTTGAT+AGG | + | chr8.1:5574998-5575017 | MS.gene96364:CDS | 35.0% | |
| AGTTTATGCAGCTGTAGTAA+GGG | - | chr8.1:5577750-5577769 | None:intergenic | 35.0% | |
| ATGTACTCGTCCAAACATAA+TGG | - | chr8.1:5577717-5577736 | None:intergenic | 35.0% | |
| CAAGTGTTAAATGTAGACAC+AGG | + | chr8.1:5577317-5577336 | MS.gene96364:intron | 35.0% | |
| CATACAATCTTATGCGGTTT+GGG | + | chr8.1:5575915-5575934 | MS.gene96364:intron | 35.0% | |
| CATTCCTCTTTCTACAAAGA+GGG | + | chr8.1:5576617-5576636 | MS.gene96364:CDS | 35.0% | |
| CATTGTTTGTATCACCTGAT+AGG | - | chr8.1:5576995-5577014 | None:intergenic | 35.0% | |
| CTCCTCAATTAAAGCTATAC+AGG | + | chr8.1:5575030-5575049 | MS.gene96364:CDS | 35.0% | |
| CTGACTTAATTGGATTCATG+TGG | + | chr8.1:5575208-5575227 | MS.gene96364:intron | 35.0% | |
| CTTGAAGGTTCTTAAAGCTT+TGG | + | chr8.1:5576238-5576257 | MS.gene96364:CDS | 35.0% | |
| GAAAGGATTATTGAACTGCA+GGG | + | chr8.1:5576209-5576228 | MS.gene96364:CDS | 35.0% | |
| GACTATTATTTAGAGACGGA+GGG | + | chr8.1:5578214-5578233 | MS.gene96364:intron | 35.0% | |
| GAGGAAGTGGGAATATAATA+AGG | - | chr8.1:5578279-5578298 | None:intergenic | 35.0% | |
| GAGGACATAATTGGTATTCA+AGG | + | chr8.1:5577036-5577055 | MS.gene96364:CDS | 35.0% | |
| GATTTATTGTTTCCCCTATC+AGG | + | chr8.1:5576978-5576997 | MS.gene96364:intron | 35.0% | |
| GTGAGTTATGCATATTGCAT+CGG | + | chr8.1:5577257-5577276 | MS.gene96364:intron | 35.0% | |
| GTTGCTTACTGTAGTAACAA+TGG | - | chr8.1:5576772-5576791 | None:intergenic | 35.0% | |
| TAGTTATGCGAGATTAGACA+CGG | + | chr8.1:5578558-5578577 | MS.gene96364:CDS | 35.0% | |
| TAGTTTATGCAGCTGTAGTA+AGG | - | chr8.1:5577751-5577770 | None:intergenic | 35.0% | |
| TATCAACCAGAAACTTTCTC+AGG | - | chr8.1:5576280-5576299 | None:intergenic | 35.0% | |
| TCTTGAGAAAACAAGGAACA+TGG | - | chr8.1:5577419-5577438 | None:intergenic | 35.0% | |
| TGAAAGGATTATTGAACTGC+AGG | + | chr8.1:5576208-5576227 | MS.gene96364:CDS | 35.0% | |
| TTAGGGCACAAGAAAAGATT+AGG | + | chr8.1:5575838-5575857 | MS.gene96364:intron | 35.0% | |
| TTGCTTTACCCAGTATGTAT+AGG | + | chr8.1:5575267-5575286 | MS.gene96364:intron | 35.0% | |
| TTGTTTGTATCACCTGATAG+GGG | - | chr8.1:5576993-5577012 | None:intergenic | 35.0% | |
| ! | AACAGCACAACAATTGATTC+AGG | + | chr8.1:5577170-5577189 | MS.gene96364:CDS | 35.0% |
| ! | AGTCAAAACATGTGACCTTT+TGG | + | chr8.1:5577674-5577693 | MS.gene96364:intron | 35.0% |
| ! | GCACTGACACGATTAAAATT+GGG | - | chr8.1:5576810-5576829 | None:intergenic | 35.0% |
| ! | GGCGGTTAGTTAATATTTAG+AGG | + | chr8.1:5575987-5576006 | MS.gene96364:intron | 35.0% |
| ! | TGTTTTCGTTTTACTTCGTG+CGG | + | chr8.1:5576927-5576946 | MS.gene96364:intron | 35.0% |
| !! | ATTGTTGTGCTGTTTGAACT+TGG | - | chr8.1:5577164-5577183 | None:intergenic | 35.0% |
| !! | CAAAGCTTTAAGAACCTTCA+AGG | - | chr8.1:5576240-5576259 | None:intergenic | 35.0% |
| !! | GTTTGTTGTTCAAGTGAGAA+AGG | - | chr8.1:5575678-5575697 | None:intergenic | 35.0% |
| !! | TATTTCTGGTCTTCGTTCTT+CGG | + | chr8.1:5576725-5576744 | MS.gene96364:CDS | 35.0% |
| !! | TGTTTGGTGTCTGACTTAAT+TGG | + | chr8.1:5575198-5575217 | MS.gene96364:intron | 35.0% |
| !! | TTGTTGTGCTGTTTGAACTT+GGG | - | chr8.1:5577163-5577182 | None:intergenic | 35.0% |
| !!! | ACATGTGACCTTTTGGTTTT+TGG | + | chr8.1:5577681-5577700 | MS.gene96364:intron | 35.0% |
| AAAAAAACAGCCAGCATAGG+AGG | - | chr8.1:5578298-5578317 | None:intergenic | 40.0% | |
| AAGTTCGTCTGTCAGGAAAA+TGG | - | chr8.1:5576168-5576187 | None:intergenic | 40.0% | |
| AATACCATTGTCCTATGCAG+AGG | + | chr8.1:5577017-5577036 | MS.gene96364:CDS | 40.0% | |
| ACAATAATACAGCAGCTGCA+GGG | + | chr8.1:5574939-5574958 | MS.gene96364:CDS | 40.0% | |
| ACCAATTATGTCCTCTGCAT+AGG | - | chr8.1:5577031-5577050 | None:intergenic | 40.0% | |
| AGCACTCAACCTATACATAC+TGG | - | chr8.1:5575279-5575298 | None:intergenic | 40.0% | |
| AGCTGCTAATCAAGAAGTAG+AGG | - | chr8.1:5575113-5575132 | None:intergenic | 40.0% | |
| AGGTCTTCTTACTCTCAACT+GGG | + | chr8.1:5578586-5578605 | MS.gene96364:CDS | 40.0% | |
| AGGTTGAGTGCTTATGTATG+TGG | + | chr8.1:5575287-5575306 | MS.gene96364:intron | 40.0% | |
| AGTTATGCGAGATTAGACAC+GGG | + | chr8.1:5578559-5578578 | MS.gene96364:CDS | 40.0% | |
| ATCCATCACAACCCTACAAT+GGG | + | chr8.1:5578620-5578639 | MS.gene96364:CDS | 40.0% | |
| ATGTCCACTTAACAATGTCC+CGG | - | chr8.1:5577637-5577656 | None:intergenic | 40.0% | |
| ATGTTCCATCCGTTTATTGG+TGG | + | chr8.1:5574970-5574989 | MS.gene96364:CDS | 40.0% | |
| CGACTATTATTTAGAGACGG+AGG | + | chr8.1:5578213-5578232 | MS.gene96364:intron | 40.0% | |
| CTAAGAATAGCATCCATTGC+AGG | - | chr8.1:5574881-5574900 | None:intergenic | 40.0% | |
| CTGCAATGGATGCTATTCTT+AGG | + | chr8.1:5574879-5574898 | MS.gene96364:CDS | 40.0% | |
| GAATCCCTCTTTGTAGAAAG+AGG | - | chr8.1:5576624-5576643 | None:intergenic | 40.0% | |
| GACAATTATTGTGAGAGGGA+GGG | - | chr8.1:5577980-5577999 | None:intergenic | 40.0% | |
| GACGAACTTCCATCTTATGT+CGG | + | chr8.1:5576179-5576198 | MS.gene96364:intron | 40.0% | |
| GCACTCAACCTATACATACT+GGG | - | chr8.1:5575278-5575297 | None:intergenic | 40.0% | |
| GCATACAATCTTATGCGGTT+TGG | + | chr8.1:5575914-5575933 | MS.gene96364:intron | 40.0% | |
| GCTGCTAATCAAGAAGTAGA+GGG | - | chr8.1:5575112-5575131 | None:intergenic | 40.0% | |
| GTCATCAGTTTCGGATAATC+CGG | - | chr8.1:5574921-5574940 | None:intergenic | 40.0% | |
| GTCTAATCGTAATGGTAGGT+AGG | - | chr8.1:5575389-5575408 | None:intergenic | 40.0% | |
| TACATACTGGGTAAAGCAAC+AGG | - | chr8.1:5575266-5575285 | None:intergenic | 40.0% | |
| TATATCGGGAAAAGAGGATC+TGG | + | chr8.1:5574841-5574860 | MS.gene96364:CDS | 40.0% | |
| TATCCATCACAACCCTACAA+TGG | + | chr8.1:5578619-5578638 | MS.gene96364:CDS | 40.0% | |
| TCCATACAATGACATTGTCG+AGG | - | chr8.1:5576691-5576710 | None:intergenic | 40.0% | |
| TCCTATGCAGAGGACATAAT+TGG | + | chr8.1:5577027-5577046 | MS.gene96364:CDS | 40.0% | |
| TCCTCGACAATGTCATTGTA+TGG | + | chr8.1:5576687-5576706 | MS.gene96364:CDS | 40.0% | |
| TGCTGATCGTGAAAGTCAAT+TGG | + | chr8.1:5576650-5576669 | MS.gene96364:CDS | 40.0% | |
| ! | TGTAGTAACAATGGAAGCAC+TGG | - | chr8.1:5576763-5576782 | None:intergenic | 40.0% |
| ! | TTATGCGGTTTGGGTATGAT+TGG | + | chr8.1:5575924-5575943 | MS.gene96364:intron | 40.0% |
| !! | ATTGTAGGGTTGTGATGGAT+AGG | - | chr8.1:5578620-5578639 | None:intergenic | 40.0% |
| !! | CTGAAAGTACTATAATCCCC+AGG | - | chr8.1:5578661-5578680 | None:intergenic | 40.0% |
| !! | GGCACTGACACGATTAAAAT+TGG | - | chr8.1:5576811-5576830 | None:intergenic | 40.0% |
| !! | GTTATTAGAGTTTTGTCGGG+AGG | + | chr8.1:5575067-5575086 | MS.gene96364:CDS | 40.0% |
| !! | TTTCTCTGATGGATTGGACT+AGG | + | chr8.1:5577788-5577807 | MS.gene96364:intron | 40.0% |
| AAGATGGAAGTTCGTCTGTC+AGG | - | chr8.1:5576175-5576194 | None:intergenic | 45.0% | |
| ACTACATTCGTCGCACTAGT+GGG | + | chr8.1:5577070-5577089 | MS.gene96364:CDS | 45.0% | |
| ACTCAAAGCTCCATTTAGCG+AGG | - | chr8.1:5575321-5575340 | None:intergenic | 45.0% | |
| AGAAGATCCGTACCCATTGT+AGG | - | chr8.1:5578635-5578654 | None:intergenic | 45.0% | |
| ATGTCCTCTGCATAGGACAA+TGG | - | chr8.1:5577024-5577043 | None:intergenic | 45.0% | |
| CAATAATACAGCAGCTGCAG+GGG | + | chr8.1:5574940-5574959 | MS.gene96364:CDS | 45.0% | |
| CATCGGCATATGTGCATGTT+TGG | + | chr8.1:5577274-5577293 | MS.gene96364:intron | 45.0% | |
| GAAGATCCGTACCCATTGTA+GGG | - | chr8.1:5578634-5578653 | None:intergenic | 45.0% | |
| GACAATAATACAGCAGCTGC+AGG | + | chr8.1:5574938-5574957 | MS.gene96364:CDS | 45.0% | |
| GAGGTCTTCTTACTCTCAAC+TGG | + | chr8.1:5578585-5578604 | MS.gene96364:CDS | 45.0% | |
| GGAATGTCAGCAACAATGCT+AGG | - | chr8.1:5576603-5576622 | None:intergenic | 45.0% | |
| GGACAATTATTGTGAGAGGG+AGG | - | chr8.1:5577981-5578000 | None:intergenic | 45.0% | |
| GTTATGCGAGATTAGACACG+GGG | + | chr8.1:5578560-5578579 | MS.gene96364:CDS | 45.0% | |
| TACAATGGGTACGGATCTTC+TGG | + | chr8.1:5578634-5578653 | MS.gene96364:CDS | 45.0% | |
| TACCCATTGTAGGGTTGTGA+TGG | - | chr8.1:5578625-5578644 | None:intergenic | 45.0% | |
| TCACAACCCTACAATGGGTA+CGG | + | chr8.1:5578625-5578644 | MS.gene96364:CDS | 45.0% | |
| TTCTATAAACTTACCCGGGC+CGG | + | chr8.1:5577615-5577634 | MS.gene96364:intron | 45.0% | |
| ! | GGATGTTTTGCCTCGCTAAA+TGG | + | chr8.1:5575308-5575327 | MS.gene96364:intron | 45.0% |
| ! | TAGTGATGGGGGTTGACTAA+TGG | + | chr8.1:5575966-5575985 | MS.gene96364:intron | 45.0% |
| ! | TGCGAAGCACTATGTAGTGA+TGG | - | chr8.1:5576579-5576598 | None:intergenic | 45.0% |
| !! | AAAGCTTTGGAAGCCGTAGT+CGG | + | chr8.1:5576251-5576270 | MS.gene96364:CDS | 45.0% |
| !! | GGATTGGACTAGGTTTTCCA+AGG | + | chr8.1:5577798-5577817 | MS.gene96364:intron | 45.0% |
| !! | TCGCTAAATGGAGCTTTGAG+TGG | + | chr8.1:5575320-5575339 | MS.gene96364:intron | 45.0% |
| !! | TTGTGCTGTTTGAACTTGGG+TGG | - | chr8.1:5577160-5577179 | None:intergenic | 45.0% |
| ACTGCAGGGAGAAACCTTGA+AGG | + | chr8.1:5576223-5576242 | MS.gene96364:CDS | 50.0% | |
| ATCGGGAAAAGAGGATCTGG+AGG | + | chr8.1:5574844-5574863 | MS.gene96364:CDS | 50.0% | |
| ATTCCCACTTCCTCCTATGC+TGG | + | chr8.1:5578285-5578304 | MS.gene96364:intron | 50.0% | |
| ATTGACTGTGCAGGAGAGCA+GGG | + | chr8.1:5577098-5577117 | MS.gene96364:CDS | 50.0% | |
| CTACATTCGTCGCACTAGTG+GGG | + | chr8.1:5577071-5577090 | MS.gene96364:CDS | 50.0% | |
| CTCACATTGCTCGTTTCCGT+AGG | + | chr8.1:5577348-5577367 | MS.gene96364:intron | 50.0% | |
| GACTACATTCGTCGCACTAG+TGG | + | chr8.1:5577069-5577088 | MS.gene96364:CDS | 50.0% | |
| GGTGCCCGATGAAATCATTG+TGG | + | chr8.1:5577119-5577138 | MS.gene96364:CDS | 50.0% | |
| TCTATAAACTTACCCGGGCC+GGG | + | chr8.1:5577616-5577635 | MS.gene96364:intron | 50.0% | |
| TGACGCCACCAATAAACGGA+TGG | - | chr8.1:5574978-5574997 | None:intergenic | 50.0% | |
| TGATGGGGGTTGACTAATGG+CGG | + | chr8.1:5575969-5575988 | MS.gene96364:intron | 50.0% | |
| ! | GCGTTGACGCCACCAATAAA+CGG | - | chr8.1:5574982-5575001 | None:intergenic | 50.0% |
| ! | TAGTGATGGTTTGTCAGCCC+AGG | - | chr8.1:5576565-5576584 | None:intergenic | 50.0% |
| ! | TATTGACTGTGCAGGAGAGC+AGG | + | chr8.1:5577097-5577116 | MS.gene96364:CDS | 50.0% |
| ! | TGCTGTTTGAACTTGGGTGG+AGG | - | chr8.1:5577157-5577176 | None:intergenic | 50.0% |
| ! | TGGGGCTATATTGACTGTGC+AGG | + | chr8.1:5577089-5577108 | MS.gene96364:CDS | 50.0% |
| !! | AAGCTTTGGAAGCCGTAGTC+GGG | + | chr8.1:5576252-5576271 | MS.gene96364:CDS | 50.0% |
| !! | CTTATGTCGGTGCCGATGAA+AGG | + | chr8.1:5576192-5576211 | MS.gene96364:CDS | 50.0% |
| !! | GTTTTGTCGGGAGGTATGCT+TGG | + | chr8.1:5575076-5575095 | MS.gene96364:intron | 50.0% |
| !! | TCATCGGCACCGACATAAGA+TGG | - | chr8.1:5576191-5576210 | None:intergenic | 50.0% |
| AAGACCGTCAGACAGATGCC+TGG | + | chr8.1:5576544-5576563 | MS.gene96364:CDS | 55.0% | |
| ACAGCCAGCATAGGAGGAAG+TGG | - | chr8.1:5578292-5578311 | None:intergenic | 55.0% | |
| ACCCGTAGCAGCACTAGTGA+TGG | + | chr8.1:5575952-5575971 | MS.gene96364:intron | 55.0% | |
| ACTTAACAATGTCCCGGCCC+GGG | - | chr8.1:5577631-5577650 | None:intergenic | 55.0% | |
| AGACCGTCAGACAGATGCCT+GGG | + | chr8.1:5576545-5576564 | MS.gene96364:CDS | 55.0% | |
| AGGCATCTGTCTGACGGTCT+TGG | - | chr8.1:5576545-5576564 | None:intergenic | 55.0% | |
| CACTTAACAATGTCCCGGCC+CGG | - | chr8.1:5577632-5577651 | None:intergenic | 55.0% | |
| CAGCCAGCATAGGAGGAAGT+GGG | - | chr8.1:5578291-5578310 | None:intergenic | 55.0% | |
| CCCGTAGCAGCACTAGTGAT+GGG | + | chr8.1:5575953-5575972 | MS.gene96364:intron | 55.0% | |
| CCGTAGCAGCACTAGTGATG+GGG | + | chr8.1:5575954-5575973 | MS.gene96364:intron | 55.0% | |
| CGGGCACCTGAGAAAGTTTC+TGG | + | chr8.1:5576271-5576290 | MS.gene96364:CDS | 55.0% | |
| CGTAGCAGCACTAGTGATGG+GGG | + | chr8.1:5575955-5575974 | MS.gene96364:intron | 55.0% | |
| CTTTCTCAGGTGCCCGACTA+CGG | - | chr8.1:5576267-5576286 | None:intergenic | 55.0% | |
| GCATCCATTGCAGGAGAGAG+CGG | - | chr8.1:5574872-5574891 | None:intergenic | 55.0% | |
| GGCATCTGTCTGACGGTCTT+GGG | - | chr8.1:5576544-5576563 | None:intergenic | 55.0% | |
| GGTACGGATCTTCTGGTCCT+GGG | + | chr8.1:5578641-5578660 | MS.gene96364:CDS | 55.0% | |
| GTACGGATCTTCTGGTCCTG+GGG | + | chr8.1:5578642-5578661 | MS.gene96364:CDS | 55.0% | |
| ! | CCCATCACTAGTGCTGCTAC+GGG | - | chr8.1:5575956-5575975 | None:intergenic | 55.0% |
| ! | CCCCATCACTAGTGCTGCTA+CGG | - | chr8.1:5575957-5575976 | None:intergenic | 55.0% |
| CAGCCCAGGCATCTGTCTGA+CGG | - | chr8.1:5576551-5576570 | None:intergenic | 60.0% | |
| CGAGATTAGACACGGGGCTG+AGG | + | chr8.1:5578566-5578585 | MS.gene96364:CDS | 60.0% | |
| CGGGCCGGGACATTGTTAAG+TGG | + | chr8.1:5577630-5577649 | MS.gene96364:intron | 60.0% | |
| GGGTACGGATCTTCTGGTCC+TGG | + | chr8.1:5578640-5578659 | MS.gene96364:CDS | 60.0% | |
| GGCACCGCTCTCTCCTGCAA+TGG | + | chr8.1:5574865-5574884 | MS.gene96364:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 5574836 | 5578687 | 5574836 | ID=MS.gene96364 |
| chr8.1 | mRNA | 5574836 | 5578687 | 5574836 | ID=MS.gene96364.t1;Parent=MS.gene96364 |
| chr8.1 | exon | 5574836 | 5575088 | 5574836 | ID=MS.gene96364.t1.exon1;Parent=MS.gene96364.t1 |
| chr8.1 | CDS | 5574836 | 5575088 | 5574836 | ID=cds.MS.gene96364.t1;Parent=MS.gene96364.t1 |
| chr8.1 | exon | 5576180 | 5576328 | 5576180 | ID=MS.gene96364.t1.exon2;Parent=MS.gene96364.t1 |
| chr8.1 | CDS | 5576180 | 5576328 | 5576180 | ID=cds.MS.gene96364.t1;Parent=MS.gene96364.t1 |
| chr8.1 | exon | 5576525 | 5576782 | 5576525 | ID=MS.gene96364.t1.exon3;Parent=MS.gene96364.t1 |
| chr8.1 | CDS | 5576525 | 5576782 | 5576525 | ID=cds.MS.gene96364.t1;Parent=MS.gene96364.t1 |
| chr8.1 | exon | 5577000 | 5577191 | 5577000 | ID=MS.gene96364.t1.exon4;Parent=MS.gene96364.t1 |
| chr8.1 | CDS | 5577000 | 5577191 | 5577000 | ID=cds.MS.gene96364.t1;Parent=MS.gene96364.t1 |
| chr8.1 | exon | 5578523 | 5578687 | 5578523 | ID=MS.gene96364.t1.exon5;Parent=MS.gene96364.t1 |
| chr8.1 | CDS | 5578523 | 5578687 | 5578523 | ID=cds.MS.gene96364.t1;Parent=MS.gene96364.t1 |
| Gene Sequence |
| Protein sequence |
