Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96537.t1 | XP_003614497.1 | 81.6 | 190 | 35 | 0 | 81 | 270 | 14 | 203 | 2.30E-72 | 282.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96537.t1 | A0A3Q7JC00 | 73.4 | 143 | 34 | 1 | 78 | 216 | 521 | 663 | 3.3e-51 | 203.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96537.t1 | G7JYD6 | 81.6 | 190 | 35 | 0 | 81 | 270 | 14 | 203 | 1.7e-72 | 282.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053903 | MS.gene96537 | 0.810612 | 1.06E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96537.t1 | MTR_5g054690 | 87.500 | 176 | 22 | 0 | 95 | 270 | 28 | 203 | 3.88e-91 | 274 |
| MS.gene96537.t1 | MTR_5g054690 | 72.441 | 127 | 33 | 2 | 85 | 209 | 163 | 289 | 2.80e-55 | 182 |
| MS.gene96537.t1 | MTR_5g054680 | 70.000 | 170 | 31 | 2 | 65 | 215 | 509 | 677 | 8.10e-71 | 233 |
| MS.gene96537.t1 | MTR_5g054680 | 75.000 | 44 | 11 | 0 | 227 | 270 | 544 | 587 | 3.74e-13 | 69.7 |
| MS.gene96537.t1 | MTR_5g054690 | 87.586 | 145 | 18 | 0 | 126 | 270 | 48 | 192 | 1.90e-69 | 218 |
| MS.gene96537.t1 | MTR_5g054690 | 72.441 | 127 | 33 | 2 | 85 | 209 | 152 | 278 | 1.33e-55 | 182 |
| MS.gene96537.t1 | MTR_5g054690 | 72.727 | 176 | 19 | 1 | 95 | 270 | 28 | 174 | 1.40e-64 | 205 |
| MS.gene96537.t1 | MTR_5g054690 | 72.441 | 127 | 33 | 2 | 85 | 209 | 134 | 260 | 8.69e-56 | 182 |
| MS.gene96537.t1 | MTR_1g013000 | 68.613 | 137 | 43 | 0 | 75 | 211 | 375 | 511 | 3.10e-58 | 195 |
| MS.gene96537.t1 | MTR_1g013000 | 71.111 | 45 | 12 | 1 | 227 | 270 | 381 | 425 | 1.39e-11 | 64.7 |
| MS.gene96537.t1 | MTR_5g054690 | 72.441 | 127 | 33 | 2 | 85 | 209 | 123 | 249 | 4.54e-56 | 183 |
| MS.gene96537.t1 | MTR_5g054690 | 69.655 | 145 | 15 | 1 | 126 | 270 | 48 | 163 | 3.93e-43 | 149 |
| MS.gene96537.t1 | MTR_7g077950 | 54.483 | 145 | 49 | 2 | 77 | 204 | 42 | 186 | 1.47e-39 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96537.t1 | AT1G25540 | 76.984 | 126 | 29 | 0 | 89 | 214 | 444 | 569 | 1.05e-57 | 196 |
| MS.gene96537.t1 | AT1G25540 | 76.984 | 126 | 29 | 0 | 89 | 214 | 553 | 678 | 2.20e-56 | 194 |
Find 61 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCGAACTATTATCATTTC+AGG | 0.219485 | 5.1:-42722580 | None:intergenic |
| TGAGGCATTCCTTCAGCTTT+AGG | 0.221661 | 5.1:-42720111 | None:intergenic |
| AATTTCTGTGGCAGGCTTAC+AGG | 0.241231 | 5.1:+42723972 | MS.gene96537:intron |
| TTCATGCAGGGAAGCTTATT+AGG | 0.302807 | 5.1:+42723717 | MS.gene96537:intron |
| TCGAGTTTGGTGATAAATAC+TGG | 0.337811 | 5.1:-42723756 | None:intergenic |
| AATCTAAGTACGTAAAGTTC+TGG | 0.363853 | 5.1:+42720160 | MS.gene96537:CDS |
| TTGAGAACATACTTCGAGTT+TGG | 0.366921 | 5.1:-42720685 | None:intergenic |
| GTGAATTCTTCTTCAAGAAC+TGG | 0.367621 | 5.1:+42720078 | MS.gene96537:CDS |
| TCCTTCAGCTTTAGGAATCA+TGG | 0.369779 | 5.1:-42720103 | None:intergenic |
| TTCATGCAGGGAAGCTTATA+CGG | 0.375772 | 5.1:+42720633 | MS.gene96537:intron |
| GAGAATACGACGATGGTTAT+CGG | 0.397225 | 5.1:+42720056 | MS.gene96537:CDS |
| ATCTTAGACTTGCAGCAAAC+TGG | 0.397418 | 5.1:+42722554 | MS.gene96537:intron |
| GTGCTGTTGCTGCTGCAGAC+TGG | 0.405306 | 5.1:-42723354 | None:intergenic |
| AATCGAATTATATAAGCGTC+TGG | 0.405936 | 5.1:+42723411 | MS.gene96537:CDS |
| TCGGGAACATACTTCGAGTT+TGG | 0.406935 | 5.1:-42723769 | None:intergenic |
| ACAAAGCCTGCCGCTTGATC+GGG | 0.429548 | 5.1:+42723196 | MS.gene96537:CDS |
| AATAGTTCGGCTTATATCTC+AGG | 0.437750 | 5.1:+42722591 | MS.gene96537:CDS |
| CGAGGGAGAAAAGGGAGAAA+AGG | 0.443028 | 5.1:+42718552 | MS.gene96537:CDS |
| TCACGGCGGCGAGGGAGAAA+AGG | 0.447500 | 5.1:+42718543 | MS.gene96537:CDS |
| GAGGGAGAAAAGGGAGAAAA+GGG | 0.450211 | 5.1:+42718553 | MS.gene96537:CDS |
| GACAAAGCCTGCCGCTTGAT+CGG | 0.450612 | 5.1:+42723195 | MS.gene96537:CDS |
| GGGTGCTACGATGGGTGAAA+GGG | 0.451525 | 5.1:+42718462 | None:intergenic |
| TCGTTTCCTTGGTCTTCTGC+AGG | 0.453658 | 5.1:+42722782 | MS.gene96537:CDS |
| ATCTAAGTACGTAAAGTTCT+GGG | 0.457183 | 5.1:+42720161 | MS.gene96537:CDS |
| TATGTTGTGATTGCATCTGC+TGG | 0.476367 | 5.1:-42723376 | None:intergenic |
| CTCCTGAAATGATAATAGTT+CGG | 0.476993 | 5.1:+42722578 | MS.gene96537:CDS |
| GGTATCTTACCCAGAAAACT+AGG | 0.482054 | 5.1:-42722755 | None:intergenic |
| CACGGCGGCGAGGGAGAAAA+GGG | 0.483353 | 5.1:+42718544 | MS.gene96537:CDS |
| AGGGTGCTACGATGGGTGAA+AGG | 0.493019 | 5.1:+42718461 | None:intergenic |
| AGATACCCACATCGTTTCCT+TGG | 0.504130 | 5.1:+42722771 | MS.gene96537:CDS |
| GAAAAGGGAGAAAAGGGAAA+TGG | 0.524245 | 5.1:+42718559 | MS.gene96537:CDS |
| AAGCATCCCGATCAAGCGGC+AGG | 0.528574 | 5.1:-42723202 | None:intergenic |
| ATGGCATGAGTGAGAGAGAT+GGG | 0.530469 | 5.1:+42718578 | MS.gene96537:CDS |
| GCTATGACTAGGAAATATGT+AGG | 0.570357 | 5.1:+42722720 | MS.gene96537:intron |
| TGGAGTAATCACGGCGGCGA+GGG | 0.570927 | 5.1:+42718535 | MS.gene96537:CDS |
| TCGAGTTTGGTGATAAACAC+TGG | 0.573907 | 5.1:-42720672 | None:intergenic |
| GAAGTTTCTACTTGTTGTTG+AGG | 0.579528 | 5.1:-42720129 | None:intergenic |
| GCCATGATTCCTAAAGCTGA+AGG | 0.584767 | 5.1:+42720102 | MS.gene96537:CDS |
| TCTTCTGCAGGAAAAGAAGC+TGG | 0.586597 | 5.1:+42722794 | MS.gene96537:CDS |
| ATCGAATTATATAAGCGTCT+GGG | 0.592926 | 5.1:+42723412 | MS.gene96537:CDS |
| GATAGTAGCAACGTCTGTGA+TGG | 0.595000 | 5.1:-42723165 | None:intergenic |
| GACTAGGAAATATGTAGGAG+AGG | 0.599175 | 5.1:+42722725 | MS.gene96537:intron |
| GGTGCTACGATGGGTGAAAG+GGG | 0.599348 | 5.1:+42718463 | None:intergenic |
| GTAGCATCATCTCTCTCACT+TGG | 0.601544 | 5.1:-42718601 | None:intergenic |
| AAATCTCGCGAGATGCTGCA+TGG | 0.609123 | 5.1:+42718515 | MS.gene96537:CDS |
| TCGAAGATCGACGACGGCGA+CGG | 0.610022 | 5.1:+42718490 | MS.gene96537:CDS |
| AATGGCATGAGTGAGAGAGA+TGG | 0.620231 | 5.1:+42718577 | MS.gene96537:CDS |
| CGAACTATTATCATTTCAGG+AGG | 0.627485 | 5.1:-42722577 | None:intergenic |
| GATGCTGCATGGAGTAATCA+CGG | 0.628057 | 5.1:+42718526 | MS.gene96537:CDS |
| AGCTTATACGGACTTAGACA+AGG | 0.629589 | 5.1:+42720645 | MS.gene96537:CDS |
| ATGGAGTAATCACGGCGGCG+AGG | 0.640746 | 5.1:+42718534 | MS.gene96537:CDS |
| GAAGACCAAGGAAACGATGT+GGG | 0.657996 | 5.1:-42722776 | None:intergenic |
| TTCGGAAACTTACGTCTCAG+AGG | 0.660078 | 5.1:-42720882 | None:intergenic |
| ATCCGAAACTTACGTCTCAG+AGG | 0.669622 | 5.1:-42724005 | None:intergenic |
| AGAAGACCAAGGAAACGATG+TGG | 0.690693 | 5.1:-42722777 | None:intergenic |
| GAATTATATAAGCGTCTGGG+AGG | 0.697863 | 5.1:+42723415 | MS.gene96537:CDS |
| AGCTTATTAGGACTTAGACA+AGG | 0.700678 | 5.1:+42723729 | MS.gene96537:CDS |
| AGAAAGAGAGAATACGACGA+TGG | 0.701114 | 5.1:+42720049 | MS.gene96537:intron |
| GGAGAATCGAAGATCGACGA+CGG | 0.707341 | 5.1:+42718484 | MS.gene96537:CDS |
| TAAGTACGTAAAGTTCTGGG+AGG | 0.726877 | 5.1:+42720164 | MS.gene96537:CDS |
| GCTGCATGGAGTAATCACGG+CGG | 0.842801 | 5.1:+42718529 | MS.gene96537:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTATTATAAATAA+GGG | + | chr5.1:42719276-42719295 | MS.gene96537:intron | 0.0% |
| !! | AAAAAATACAAATTGAAATA+AGG | - | chr5.1:42722639-42722658 | None:intergenic | 10.0% |
| !!! | ATAATGTGTTTTATTTATAA+GGG | - | chr5.1:42719584-42719603 | None:intergenic | 10.0% |
| !!! | TCTTTTATTAATTATTATTG+TGG | - | chr5.1:42722298-42722317 | None:intergenic | 10.0% |
| !!! | TTGTTATTTATATAATTTTG+TGG | + | chr5.1:42723911-42723930 | MS.gene96537:intron | 10.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr5.1:42721267-42721286 | MS.gene96537:intron | 15.0% |
| !! | TAATAAAAAAATAGTGAAGT+TGG | - | chr5.1:42719269-42719288 | None:intergenic | 15.0% |
| !!! | ATGTTATAGTAACAAATTTT+TGG | + | chr5.1:42723645-42723664 | MS.gene96537:intron | 15.0% |
| !!! | CATAATGTGTTTTATTTATA+AGG | - | chr5.1:42719585-42719604 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr5.1:42721307-42721326 | MS.gene96537:intron | 15.0% |
| !!! | CTGTTATTTATATAATTTTG+TGG | + | chr5.1:42720812-42720831 | MS.gene96537:intron | 15.0% |
| !!! | TCATTTCACTTTTTTTTTAA+AGG | + | chr5.1:42719128-42719147 | MS.gene96537:intron | 15.0% |
| !!! | TGATTTTATGAAATTATTCT+TGG | - | chr5.1:42722254-42722273 | None:intergenic | 15.0% |
| !!! | TTAAAAGTATATATTCTTTC+CGG | - | chr5.1:42720714-42720733 | None:intergenic | 15.0% |
| !!! | TTGTATTTTTTAACAACTAT+TGG | + | chr5.1:42722648-42722667 | MS.gene96537:intron | 15.0% |
| !!! | TTTTTATCAGTAGTATAATT+TGG | + | chr5.1:42720979-42720998 | MS.gene96537:intron | 15.0% |
| !!! | TTTTTTTTTTACCGAAATTT+AGG | - | chr5.1:42719043-42719062 | None:intergenic | 15.0% |
| !! | AAACAAAGTGAAATTCTTAA+AGG | - | chr5.1:42723513-42723532 | None:intergenic | 20.0% |
| !! | AAATGGAATGAAATAATCAT+TGG | + | chr5.1:42721131-42721150 | MS.gene96537:intron | 20.0% |
| !! | ATTAAAGTTAGGATACTATT+AGG | + | chr5.1:42718794-42718813 | MS.gene96537:intron | 20.0% |
| !! | CTCTTTCAAAATACATATTA+AGG | - | chr5.1:42720374-42720393 | None:intergenic | 20.0% |
| !! | GAAAATTTCACTCTTAATTT+AGG | + | chr5.1:42722379-42722398 | MS.gene96537:intron | 20.0% |
| !! | GAAGTAACAATAAATTCAAA+CGG | - | chr5.1:42721974-42721993 | None:intergenic | 20.0% |
| !! | TTTATGAAATTATTCTTGGA+AGG | - | chr5.1:42722250-42722269 | None:intergenic | 20.0% |
| !!! | AAAAGTTGGAGTATTTATTA+AGG | + | chr5.1:42721232-42721251 | MS.gene96537:intron | 20.0% |
| !!! | AAAGTTGGAGTATTTATTAA+GGG | + | chr5.1:42721233-42721252 | MS.gene96537:intron | 20.0% |
| !!! | ATTTTACTATTGTGCAAAAA+TGG | + | chr5.1:42721817-42721836 | MS.gene96537:intron | 20.0% |
| !!! | CTTAATATGTATTTTGAAAG+AGG | + | chr5.1:42720372-42720391 | MS.gene96537:intron | 20.0% |
| !!! | GGTTTTAAGTAAATAAACAA+AGG | - | chr5.1:42723292-42723311 | None:intergenic | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | - | chr5.1:42721179-42721198 | None:intergenic | 20.0% |
| !!! | TAATTTTATATGCTATGACT+AGG | + | chr5.1:42722709-42722728 | MS.gene96537:intron | 20.0% |
| !!! | TACTCATTTTTTTAATGACA+TGG | + | chr5.1:42718650-42718669 | MS.gene96537:intron | 20.0% |
| !!! | TATAAGGGTAATAATCATTT+TGG | - | chr5.1:42719569-42719588 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr5.1:42721180-42721199 | None:intergenic | 20.0% |
| !!! | TTAAATGAATGGATTAGAAT+CGG | - | chr5.1:42718917-42718936 | None:intergenic | 20.0% |
| !!! | TTGAAATTTTGATACATTGA+GGG | + | chr5.1:42719511-42719530 | MS.gene96537:intron | 20.0% |
| !!! | TTTGAAATTTTGATACATTG+AGG | + | chr5.1:42719510-42719529 | MS.gene96537:intron | 20.0% |
| !!! | TTTTTTTAATGACATGGATT+TGG | + | chr5.1:42718656-42718675 | MS.gene96537:intron | 20.0% |
| ! | AAAACGAATGATTTAAGAAG+AGG | - | chr5.1:42722506-42722525 | None:intergenic | 25.0% |
| ! | AAAACGTTGGATTAAATGAA+TGG | - | chr5.1:42718928-42718947 | None:intergenic | 25.0% |
| ! | AAAATGGATCTTACATAAAG+TGG | + | chr5.1:42720464-42720483 | MS.gene96537:intron | 25.0% |
| ! | AAATGTTCGATCATATGATT+TGG | - | chr5.1:42722478-42722497 | None:intergenic | 25.0% |
| ! | AAGGTTGAATCAAATTTCAA+TGG | - | chr5.1:42718997-42719016 | None:intergenic | 25.0% |
| ! | AATAAGGGTAGTAGTTATTT+AGG | + | chr5.1:42719291-42719310 | MS.gene96537:intron | 25.0% |
| ! | AATTACGAAACTGAAAATTG+TGG | - | chr5.1:42722329-42722348 | None:intergenic | 25.0% |
| ! | AGAAAAATACAATACAGACT+CGG | - | chr5.1:42722434-42722453 | None:intergenic | 25.0% |
| ! | AGTTGAAAGAGATTAAAGTT+AGG | + | chr5.1:42718783-42718802 | MS.gene96537:intron | 25.0% |
| ! | ATAACCACAAAATAAATTCC+AGG | - | chr5.1:42722171-42722190 | None:intergenic | 25.0% |
| ! | CAATTATTGAAATTCATGCA+GGG | + | chr5.1:42720621-42720640 | MS.gene96537:intron | 25.0% |
| ! | GCTTGAGATACATAAAATTA+AGG | - | chr5.1:42720312-42720331 | None:intergenic | 25.0% |
| ! | GTATTTATTAAGGGTAAAGT+TGG | + | chr5.1:42721242-42721261 | MS.gene96537:intron | 25.0% |
| ! | TATGAGAAGAGATAAAACTT+CGG | - | chr5.1:42720903-42720922 | None:intergenic | 25.0% |
| ! | TATGTAACAAAATAGGTGAT+CGG | + | chr5.1:42719751-42719770 | MS.gene96537:intron | 25.0% |
| ! | TATTAAGAATAAGACTGCAA+AGG | - | chr5.1:42723890-42723909 | None:intergenic | 25.0% |
| ! | TCAATTATTGAAATTCATGC+AGG | + | chr5.1:42720620-42720639 | MS.gene96537:intron | 25.0% |
| ! | TGAAGACTATGTAACAAAAT+AGG | + | chr5.1:42719744-42719763 | MS.gene96537:intron | 25.0% |
| ! | TTATATAATGATAAACCACG+TGG | + | chr5.1:42718821-42718840 | MS.gene96537:intron | 25.0% |
| ! | TTGTATTAAATACTGTATCG+CGG | - | chr5.1:42721534-42721553 | None:intergenic | 25.0% |
| !! | AATATATTTTATCAGGCAGT+CGG | - | chr5.1:42723791-42723810 | None:intergenic | 25.0% |
| !! | ATTGAATTTGAAATTCATGC+AGG | + | chr5.1:42723704-42723723 | MS.gene96537:intron | 25.0% |
| !! | GTGATTTTATATATTCGAGA+AGG | + | chr5.1:42721583-42721602 | MS.gene96537:intron | 25.0% |
| !! | TAAGATCCATTTTCAATGTA+TGG | - | chr5.1:42720457-42720476 | None:intergenic | 25.0% |
| !! | TACATTTAGCATTGTTTTCT+TGG | + | chr5.1:42722874-42722893 | MS.gene96537:intron | 25.0% |
| !! | TTAAAATGGTTTTCTCTTCT+TGG | + | chr5.1:42721369-42721388 | MS.gene96537:intron | 25.0% |
| !! | TTAACACTCATTTTCTTGTT+GGG | + | chr5.1:42720414-42720433 | MS.gene96537:intron | 25.0% |
| !! | TTATTATTGTGGATTGATGT+TGG | - | chr5.1:42722287-42722306 | None:intergenic | 25.0% |
| !! | TTGAATTTGAAATTCATGCA+GGG | + | chr5.1:42723705-42723724 | MS.gene96537:intron | 25.0% |
| !! | TTGATTCAACCTTTTTGAAT+TGG | + | chr5.1:42719004-42719023 | MS.gene96537:intron | 25.0% |
| !! | TTGTGTGATTTCATAAGTTT+TGG | + | chr5.1:42719994-42720013 | MS.gene96537:intron | 25.0% |
| !! | TTTAACACTCATTTTCTTGT+TGG | + | chr5.1:42720413-42720432 | MS.gene96537:intron | 25.0% |
| !!! | AGACAATTTTGACTAACAAA+GGG | - | chr5.1:42719389-42719408 | None:intergenic | 25.0% |
| !!! | GAAATTAAATTGTTTTTGCC+TGG | + | chr5.1:42722150-42722169 | MS.gene96537:intron | 25.0% |
| !!! | TTTAGCTCGTTTTCAATAAA+TGG | + | chr5.1:42719835-42719854 | MS.gene96537:intron | 25.0% |
| AAAAATAGTGAAGTTGGATG+TGG | - | chr5.1:42719263-42719282 | None:intergenic | 30.0% | |
| AAAATAGTGAAGTTGGATGT+GGG | - | chr5.1:42719262-42719281 | None:intergenic | 30.0% | |
| AAAGTTACAATGTAAGAGAG+AGG | - | chr5.1:42720540-42720559 | None:intergenic | 30.0% | |
| AAATTGTGTGAGAGAAAAGT+TGG | + | chr5.1:42721218-42721237 | MS.gene96537:intron | 30.0% | |
| AAGCATTTACAATAGCCTAA+AGG | - | chr5.1:42721705-42721724 | None:intergenic | 30.0% | |
| AAGCTACCAAGATTAACTAT+TGG | - | chr5.1:42723611-42723630 | None:intergenic | 30.0% | |
| AAGTGAAATGAAATCATCAC+AGG | - | chr5.1:42719119-42719138 | None:intergenic | 30.0% | |
| AATCGAATTATATAAGCGTC+TGG | + | chr5.1:42723411-42723430 | MS.gene96537:CDS | 30.0% | |
| AATCTAAGTACGTAAAGTTC+TGG | + | chr5.1:42720160-42720179 | MS.gene96537:CDS | 30.0% | |
| ACAATGCTAAATGTATGACA+AGG | - | chr5.1:42722869-42722888 | None:intergenic | 30.0% | |
| ACCAACAGGAATTTAGTTAT+TGG | - | chr5.1:42722987-42723006 | None:intergenic | 30.0% | |
| AGCATTTACAATAGCCTAAA+GGG | - | chr5.1:42721704-42721723 | None:intergenic | 30.0% | |
| AGGTTTGATCCAATTCAAAA+AGG | - | chr5.1:42719016-42719035 | None:intergenic | 30.0% | |
| AGTAGAGTTACTTGCTTTAT+TGG | + | chr5.1:42723055-42723074 | MS.gene96537:intron | 30.0% | |
| AGTTTAGTTGTACCTAGTTA+AGG | + | chr5.1:42721617-42721636 | MS.gene96537:intron | 30.0% | |
| ATAAAAAGTTGCCAACATGA+AGG | + | chr5.1:42718694-42718713 | MS.gene96537:intron | 30.0% | |
| ATCCTGATGTATAATTTCTG+TGG | + | chr5.1:42723960-42723979 | MS.gene96537:intron | 30.0% | |
| ATCGAATTATATAAGCGTCT+GGG | + | chr5.1:42723412-42723431 | MS.gene96537:CDS | 30.0% | |
| ATCTAAGTACGTAAAGTTCT+GGG | + | chr5.1:42720161-42720180 | MS.gene96537:CDS | 30.0% | |
| ATGCACTTACATAGAAATCA+AGG | - | chr5.1:42722047-42722066 | None:intergenic | 30.0% | |
| ATGCATTTGGATTTCACATA+GGG | - | chr5.1:42718967-42718986 | None:intergenic | 30.0% | |
| ATTATTAGTTCAGAACCAAC+AGG | - | chr5.1:42723001-42723020 | None:intergenic | 30.0% | |
| ATTCTCTATGAATTCTCTCT+AGG | + | chr5.1:42721788-42721807 | MS.gene96537:intron | 30.0% | |
| ATTGTGGAAAGAGTAATGAT+AGG | - | chr5.1:42718753-42718772 | None:intergenic | 30.0% | |
| CAATGCTAAATGTATGACAA+GGG | - | chr5.1:42722868-42722887 | None:intergenic | 30.0% | |
| CTCCTGAAATGATAATAGTT+CGG | + | chr5.1:42722578-42722597 | MS.gene96537:CDS | 30.0% | |
| GATACATTGAGGGATTATTA+TGG | + | chr5.1:42719521-42719540 | MS.gene96537:intron | 30.0% | |
| GCTACAGAAAAAAAATCATG+TGG | - | chr5.1:42722684-42722703 | None:intergenic | 30.0% | |
| GCTTGTCATGAGAAAAAAAT+TGG | + | chr5.1:42719082-42719101 | MS.gene96537:intron | 30.0% | |
| GTTACGAGTTAATATTCTAC+AGG | - | chr5.1:42723035-42723054 | None:intergenic | 30.0% | |
| GTTTAGTTGTACCTAGTTAA+GGG | + | chr5.1:42721618-42721637 | MS.gene96537:intron | 30.0% | |
| GTTTGAAAAGTCAATTCAGT+TGG | + | chr5.1:42722128-42722147 | MS.gene96537:intron | 30.0% | |
| TAAAAAGTTGCCAACATGAA+GGG | + | chr5.1:42718695-42718714 | MS.gene96537:intron | 30.0% | |
| TATGCATTTGGATTTCACAT+AGG | - | chr5.1:42718968-42718987 | None:intergenic | 30.0% | |
| TCAACTTATGAAACACATTG+TGG | - | chr5.1:42718769-42718788 | None:intergenic | 30.0% | |
| TCCAATAACTAAATTCCTGT+TGG | + | chr5.1:42722983-42723002 | MS.gene96537:intron | 30.0% | |
| TGAGAGATAAAGTTGAATCT+AGG | - | chr5.1:42723460-42723479 | None:intergenic | 30.0% | |
| TGGAAGTGATAATAATTCAG+TGG | + | chr5.1:42722084-42722103 | MS.gene96537:intron | 30.0% | |
| TGGATACCATACATTGAAAA+TGG | + | chr5.1:42720448-42720467 | MS.gene96537:intron | 30.0% | |
| TTAACAACTATTGGTATCTC+AGG | + | chr5.1:42722657-42722676 | MS.gene96537:intron | 30.0% | |
| TTAATAAATAGCAGCTACAG+CGG | + | chr5.1:42721469-42721488 | MS.gene96537:intron | 30.0% | |
| ! | ACAACCTTGTTTAAAACTTG+TGG | + | chr5.1:42719628-42719647 | MS.gene96537:intron | 30.0% |
| ! | ATATATTTTATCAGGCAGTC+GGG | - | chr5.1:42723790-42723809 | None:intergenic | 30.0% |
| ! | CTCGTTTTCAATAAATGGAT+AGG | + | chr5.1:42719840-42719859 | MS.gene96537:intron | 30.0% |
| ! | TGCAAGTCTAAGATCAATAA+AGG | - | chr5.1:42722548-42722567 | None:intergenic | 30.0% |
| !! | AAGCGACACTCATTTTAAAA+CGG | - | chr5.1:42721088-42721107 | None:intergenic | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | + | chr5.1:42721333-42721352 | MS.gene96537:intron | 30.0% |
| !! | CAGTAGTATAATTTGGTGTT+GGG | + | chr5.1:42720986-42721005 | MS.gene96537:intron | 30.0% |
| !! | GAGGGAGTATTTCTTTAAAA+TGG | + | chr5.1:42721355-42721374 | MS.gene96537:intron | 30.0% |
| !! | GTCTATTTTAAACCTCTGAT+GGG | + | chr5.1:42723261-42723280 | MS.gene96537:intron | 30.0% |
| !! | TCAGTAGTATAATTTGGTGT+TGG | + | chr5.1:42720985-42721004 | MS.gene96537:intron | 30.0% |
| !! | TCTTTTTAAAAAGATCCACG+TGG | - | chr5.1:42718839-42718858 | None:intergenic | 30.0% |
| !! | TGTCTATTTTAAACCTCTGA+TGG | + | chr5.1:42723260-42723279 | MS.gene96537:intron | 30.0% |
| !! | TTTAAAATGAGTGTCGCTTT+AGG | + | chr5.1:42721089-42721108 | MS.gene96537:intron | 30.0% |
| !!! | CTTTTTTTTTAAAGGACACG+TGG | + | chr5.1:42719136-42719155 | MS.gene96537:intron | 30.0% |
| !!! | GAGACAATTTTGACTAACAA+AGG | - | chr5.1:42719390-42719409 | None:intergenic | 30.0% |
| !!! | GATTTCATAAGTTTTGGAAC+TGG | + | chr5.1:42720000-42720019 | MS.gene96537:intron | 30.0% |
| !!! | GTTTCCACAAGTTTTAAACA+AGG | - | chr5.1:42719635-42719654 | None:intergenic | 30.0% |
| !!! | TTTGCCTGGAATTTATTTTG+TGG | + | chr5.1:42722164-42722183 | MS.gene96537:intron | 30.0% |
| !!! | TTTTGGTTCCTGAATTTGTA+AGG | - | chr5.1:42719552-42719571 | None:intergenic | 30.0% |
| !!! | TTTTTTCTCATGACAAGCTT+AGG | - | chr5.1:42719080-42719099 | None:intergenic | 30.0% |
| AAATAGTGAAGTTGGATGTG+GGG | - | chr5.1:42719261-42719280 | None:intergenic | 35.0% | |
| AATAGTTCGGCTTATATCTC+AGG | + | chr5.1:42722591-42722610 | MS.gene96537:CDS | 35.0% | |
| AATGATAGGTATACCACCAT+AGG | - | chr5.1:42718739-42718758 | None:intergenic | 35.0% | |
| ACAGTGAAATGATAGTAAGC+TGG | - | chr5.1:42720764-42720783 | None:intergenic | 35.0% | |
| AGACACAGTTGTGTAAAATG+AGG | - | chr5.1:42723484-42723503 | None:intergenic | 35.0% | |
| AGCCGAACTATTATCATTTC+AGG | - | chr5.1:42722583-42722602 | None:intergenic | 35.0% | |
| AGCTTATTAGGACTTAGACA+AGG | + | chr5.1:42723729-42723748 | MS.gene96537:CDS | 35.0% | |
| AGTAAATTGGGGGAGAATTA+AGG | - | chr5.1:42722918-42722937 | None:intergenic | 35.0% | |
| ATTACACAGGGGAAGTAAAT+TGG | - | chr5.1:42722931-42722950 | None:intergenic | 35.0% | |
| CAACAACTATATATTACCCC+AGG | - | chr5.1:42723231-42723250 | None:intergenic | 35.0% | |
| CAATGGTTTGAGTATGCATT+TGG | - | chr5.1:42718980-42718999 | None:intergenic | 35.0% | |
| CCATATAGGGAAATGATGAT+AGG | - | chr5.1:42723867-42723886 | None:intergenic | 35.0% | |
| CCTATCATCATTTCCCTATA+TGG | + | chr5.1:42723864-42723883 | MS.gene96537:intron | 35.0% | |
| CGAACTATTATCATTTCAGG+AGG | - | chr5.1:42722580-42722599 | None:intergenic | 35.0% | |
| CGCTATAACATAGCAGAATT+TGG | + | chr5.1:42721492-42721511 | MS.gene96537:intron | 35.0% | |
| CTCGGTCATTACAATGAAAT+TGG | - | chr5.1:42722416-42722435 | None:intergenic | 35.0% | |
| GACACAGTTGTGTAAAATGA+GGG | - | chr5.1:42723483-42723502 | None:intergenic | 35.0% | |
| GCTATGACTAGGAAATATGT+AGG | + | chr5.1:42722720-42722739 | MS.gene96537:intron | 35.0% | |
| GGTCATTACAATGAAATTGG+AGG | - | chr5.1:42722413-42722432 | None:intergenic | 35.0% | |
| GTGAATTCTTCTTCAAGAAC+TGG | + | chr5.1:42720078-42720097 | MS.gene96537:CDS | 35.0% | |
| GTGCAGTGTACAACATATAT+TGG | + | chr5.1:42721860-42721879 | MS.gene96537:intron | 35.0% | |
| TGATGTATAATTTCTGTGGC+AGG | + | chr5.1:42723964-42723983 | MS.gene96537:intron | 35.0% | |
| TGCATTTGGATTTCACATAG+GGG | - | chr5.1:42718966-42718985 | None:intergenic | 35.0% | |
| TGCCACAGAAATTATACATC+AGG | - | chr5.1:42723965-42723984 | None:intergenic | 35.0% | |
| TGGCTATTCCTTACAAATTC+AGG | + | chr5.1:42719541-42719560 | MS.gene96537:intron | 35.0% | |
| TTACACAGGGGAAGTAAATT+GGG | - | chr5.1:42722930-42722949 | None:intergenic | 35.0% | |
| TTCGCACCAATAGTTAATCT+TGG | + | chr5.1:42723602-42723621 | MS.gene96537:intron | 35.0% | |
| TTGGCACACAGATTAAGAAA+TGG | + | chr5.1:42721114-42721133 | MS.gene96537:intron | 35.0% | |
| TTGGTGCGAAACAAAATGAA+TGG | - | chr5.1:42723592-42723611 | None:intergenic | 35.0% | |
| ! | TACTTGCTTTATTGGCAGTA+AGG | + | chr5.1:42723063-42723082 | MS.gene96537:intron | 35.0% |
| ! | TCGAGTTTGGTGATAAATAC+TGG | - | chr5.1:42723759-42723778 | None:intergenic | 35.0% |
| ! | TTGAGAACATACTTCGAGTT+TGG | - | chr5.1:42720688-42720707 | None:intergenic | 35.0% |
| !! | GAAGTTTCTACTTGTTGTTG+AGG | - | chr5.1:42720132-42720151 | None:intergenic | 35.0% |
| !! | GAGAGATCAAGTTGAATATG+TGG | - | chr5.1:42720207-42720226 | None:intergenic | 35.0% |
| !!! | ATTTGGTGTTGGGTTGATTT+TGG | + | chr5.1:42720996-42721015 | MS.gene96537:intron | 35.0% |
| !!! | ATTTTGAAAGAGGAGTGCTA+TGG | + | chr5.1:42720382-42720401 | MS.gene96537:intron | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+GGG | - | chr5.1:42721084-42721103 | None:intergenic | 35.0% |
| AAGACTGCAAAGGCCATATA+GGG | - | chr5.1:42723880-42723899 | None:intergenic | 40.0% | |
| ACAGATAGCATCCCTTAACT+AGG | - | chr5.1:42721632-42721651 | None:intergenic | 40.0% | |
| ACGCGTCAATTTCATTACAC+AGG | - | chr5.1:42722944-42722963 | None:intergenic | 40.0% | |
| AGAAAGAGAGAATACGACGA+TGG | + | chr5.1:42720049-42720068 | MS.gene96537:intron | 40.0% | |
| AGCTTATACGGACTTAGACA+AGG | + | chr5.1:42720645-42720664 | MS.gene96537:CDS | 40.0% | |
| ATAGGGAAATGATGATAGGC+TGG | - | chr5.1:42723863-42723882 | None:intergenic | 40.0% | |
| ATCTATTTAGGGACTATGCG+GGG | + | chr5.1:42719229-42719248 | MS.gene96537:intron | 40.0% | |
| ATCTTAGACTTGCAGCAAAC+TGG | + | chr5.1:42722554-42722573 | MS.gene96537:intron | 40.0% | |
| ATGTGTAATTTCTCTGTCGC+AGG | + | chr5.1:42720841-42720860 | MS.gene96537:intron | 40.0% | |
| CAAACCTGCTGCCTAAATTT+CGG | + | chr5.1:42719029-42719048 | MS.gene96537:intron | 40.0% | |
| CAAATGACATGCCAAGCATA+AGG | - | chr5.1:42722006-42722025 | None:intergenic | 40.0% | |
| CATTCTGTATTGCGTGTGAA+TGG | + | chr5.1:42722064-42722083 | MS.gene96537:intron | 40.0% | |
| CGCGTCAATTTCATTACACA+GGG | - | chr5.1:42722943-42722962 | None:intergenic | 40.0% | |
| CGTCGTATTCTCTCTTTCTA+TGG | - | chr5.1:42720048-42720067 | None:intergenic | 40.0% | |
| CTTGTTGGGTGAAATCTATG+TGG | + | chr5.1:42720428-42720447 | MS.gene96537:intron | 40.0% | |
| GAAAAGGGAGAAAAGGGAAA+TGG | + | chr5.1:42718559-42718578 | MS.gene96537:CDS | 40.0% | |
| GAATTATATAAGCGTCTGGG+AGG | + | chr5.1:42723415-42723434 | MS.gene96537:CDS | 40.0% | |
| GACTAGGAAATATGTAGGAG+AGG | + | chr5.1:42722725-42722744 | MS.gene96537:intron | 40.0% | |
| GAGAATACGACGATGGTTAT+CGG | + | chr5.1:42720056-42720075 | MS.gene96537:CDS | 40.0% | |
| GATCTATTTAGGGACTATGC+GGG | + | chr5.1:42719228-42719247 | MS.gene96537:intron | 40.0% | |
| GCGTCAATTTCATTACACAG+GGG | - | chr5.1:42722942-42722961 | None:intergenic | 40.0% | |
| GGATCTATTTAGGGACTATG+CGG | + | chr5.1:42719227-42719246 | MS.gene96537:intron | 40.0% | |
| GTAACAAAATAGGTGATCGG+TGG | + | chr5.1:42719754-42719773 | MS.gene96537:intron | 40.0% | |
| GTGCGAAACAAAATGAATGG+CGG | - | chr5.1:42723589-42723608 | None:intergenic | 40.0% | |
| TAAGACTGCAAAGGCCATAT+AGG | - | chr5.1:42723881-42723900 | None:intergenic | 40.0% | |
| TACACAGGGGAAGTAAATTG+GGG | - | chr5.1:42722929-42722948 | None:intergenic | 40.0% | |
| TATGTTGTGATTGCATCTGC+TGG | - | chr5.1:42723379-42723398 | None:intergenic | 40.0% | |
| TCTGACACTCACTCTTCTAT+GGG | - | chr5.1:42720510-42720529 | None:intergenic | 40.0% | |
| TGCGTTACTTGTCTATACTC+TGG | + | chr5.1:42723093-42723112 | MS.gene96537:intron | 40.0% | |
| TGTGTAATTTCTCTGTCGCA+GGG | + | chr5.1:42720842-42720861 | MS.gene96537:intron | 40.0% | |
| TTAAAACCTTGAACGCAAGC+AGG | + | chr5.1:42723304-42723323 | MS.gene96537:intron | 40.0% | |
| TTCATGCAGGGAAGCTTATA+CGG | + | chr5.1:42720633-42720652 | MS.gene96537:intron | 40.0% | |
| TTCATGCAGGGAAGCTTATT+AGG | + | chr5.1:42723717-42723736 | MS.gene96537:intron | 40.0% | |
| TTTACCGAAATTTAGGCAGC+AGG | - | chr5.1:42719036-42719055 | None:intergenic | 40.0% | |
| ! | GAAACAAAATGAATGGCGGA+CGG | - | chr5.1:42723585-42723604 | None:intergenic | 40.0% |
| ! | GAAGTTGACTTTGCTCTTGT+CGG | + | chr5.1:42719691-42719710 | MS.gene96537:intron | 40.0% |
| ! | TCGAGTTTGGTGATAAACAC+TGG | - | chr5.1:42720675-42720694 | None:intergenic | 40.0% |
| !! | AGGCAGATTTCCTAGTTTTC+TGG | + | chr5.1:42722745-42722764 | MS.gene96537:CDS | 40.0% |
| !! | GGCAGATTTCCTAGTTTTCT+GGG | + | chr5.1:42722746-42722765 | MS.gene96537:CDS | 40.0% |
| !! | TAAGTACGTAAAGTTCTGGG+AGG | + | chr5.1:42720164-42720183 | MS.gene96537:CDS | 40.0% |
| !! | TCCTTCAGCTTTAGGAATCA+TGG | - | chr5.1:42720106-42720125 | None:intergenic | 40.0% |
| !! | TGACAAGGGTGTTTAAACGA+AGG | - | chr5.1:42722854-42722873 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTAAAACGG+AGG | - | chr5.1:42721085-42721104 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr5.1:42721337-42721356 | MS.gene96537:intron | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | + | chr5.1:42721336-42721355 | MS.gene96537:intron | 40.0% |
| AAGATCAGTAGCTACGTGCA+GGG | - | chr5.1:42720335-42720354 | None:intergenic | 45.0% | |
| AATACCCTTTAGCACGAGCA+TGG | - | chr5.1:42719975-42719994 | None:intergenic | 45.0% | |
| AATGGCATGAGTGAGAGAGA+TGG | + | chr5.1:42718577-42718596 | MS.gene96537:CDS | 45.0% | |
| AATTTCTGTGGCAGGCTTAC+AGG | + | chr5.1:42723972-42723991 | MS.gene96537:intron | 45.0% | |
| ACAAAGGTCTAACCCATCAG+AGG | - | chr5.1:42723276-42723295 | None:intergenic | 45.0% | |
| ACACAGGGGAAGTAAATTGG+GGG | - | chr5.1:42722928-42722947 | None:intergenic | 45.0% | |
| ACTTATCCTGCTTGCGTTCA+AGG | - | chr5.1:42723313-42723332 | None:intergenic | 45.0% | |
| ACTTGTCTATACTCTGGCTG+TGG | + | chr5.1:42723099-42723118 | MS.gene96537:intron | 45.0% | |
| AGAAGACCAAGGAAACGATG+TGG | - | chr5.1:42722780-42722799 | None:intergenic | 45.0% | |
| AGATACCCACATCGTTTCCT+TGG | + | chr5.1:42722771-42722790 | MS.gene96537:CDS | 45.0% | |
| ATACCCTTTAGCACGAGCAT+GGG | - | chr5.1:42719974-42719993 | None:intergenic | 45.0% | |
| ATAGATCAACCTGCTACAGC+AGG | + | chr5.1:42721675-42721694 | MS.gene96537:intron | 45.0% | |
| ATGACATGCCAAGCATAAGG+CGG | - | chr5.1:42722003-42722022 | None:intergenic | 45.0% | |
| ATGGCATGAGTGAGAGAGAT+GGG | + | chr5.1:42718578-42718597 | MS.gene96537:CDS | 45.0% | |
| CGAAGTATGTTCTCAACTGC+CGG | + | chr5.1:42720692-42720711 | MS.gene96537:intron | 45.0% | |
| CGTGGCAGCTTATAAAACGT+TGG | - | chr5.1:42718941-42718960 | None:intergenic | 45.0% | |
| CTCAGGGACGGATCTATTTA+GGG | + | chr5.1:42719218-42719237 | MS.gene96537:intron | 45.0% | |
| CTCTGACACTCACTCTTCTA+TGG | - | chr5.1:42720511-42720530 | None:intergenic | 45.0% | |
| CTGACACTCACTCTTCTATG+GGG | - | chr5.1:42720509-42720528 | None:intergenic | 45.0% | |
| GAAGACCAAGGAAACGATGT+GGG | - | chr5.1:42722779-42722798 | None:intergenic | 45.0% | |
| GAGGGAGAAAAGGGAGAAAA+GGG | + | chr5.1:42718553-42718572 | MS.gene96537:CDS | 45.0% | |
| GATAGGTATACCACCATAGG+TGG | - | chr5.1:42718736-42718755 | None:intergenic | 45.0% | |
| GATAGTAGCAACGTCTGTGA+TGG | - | chr5.1:42723168-42723187 | None:intergenic | 45.0% | |
| GATGCTGCATGGAGTAATCA+CGG | + | chr5.1:42718526-42718545 | MS.gene96537:CDS | 45.0% | |
| GCCATGATTCCTAAAGCTGA+AGG | + | chr5.1:42720102-42720121 | MS.gene96537:CDS | 45.0% | |
| GTAGCATCATCTCTCTCACT+TGG | - | chr5.1:42718604-42718623 | None:intergenic | 45.0% | |
| TAGAGTGGTATTGCCACCTA+TGG | + | chr5.1:42718720-42718739 | MS.gene96537:intron | 45.0% | |
| TCTATGGGGGAAACTCATGT+TGG | - | chr5.1:42720495-42720514 | None:intergenic | 45.0% | |
| TCTTCTGCAGGAAAAGAAGC+TGG | + | chr5.1:42722794-42722813 | MS.gene96537:CDS | 45.0% | |
| TGACACTCACTCTTCTATGG+GGG | - | chr5.1:42720508-42720527 | None:intergenic | 45.0% | |
| TGTGGTTATCAATGTCGCCA+CGG | + | chr5.1:42722182-42722201 | MS.gene96537:intron | 45.0% | |
| TTCGGAAACTTACGTCTCAG+AGG | - | chr5.1:42720885-42720904 | None:intergenic | 45.0% | |
| ! | TCGGGAACATACTTCGAGTT+TGG | - | chr5.1:42723772-42723791 | None:intergenic | 45.0% |
| ! | TCTTTTCCTGCAGAAGACCA+AGG | - | chr5.1:42722791-42722810 | None:intergenic | 45.0% |
| ! | TGAGGCATTCCTTCAGCTTT+AGG | - | chr5.1:42720114-42720133 | None:intergenic | 45.0% |
| !! | ATGAGTGTCGCTTTAGGCTT+TGG | + | chr5.1:42721095-42721114 | MS.gene96537:intron | 45.0% |
| !! | GAAAAAGCATCCCGATCAAG+CGG | - | chr5.1:42723209-42723228 | None:intergenic | 45.0% |
| !! | TGCTGTAGCAGGTTGATCTA+TGG | - | chr5.1:42721676-42721695 | None:intergenic | 45.0% |
| !!! | TGATCGGGATGCTTTTTCCT+GGG | + | chr5.1:42723211-42723230 | MS.gene96537:CDS | 45.0% |
| !!! | TTGATCGGGATGCTTTTTCC+TGG | + | chr5.1:42723210-42723229 | MS.gene96537:CDS | 45.0% |
| !! | AGATAAATAATTAATTAATA+TGG | + | chr5.1:42718856-42718875 | MS.gene96537:intron | 5.0% |
| !!! | ATATATAAATATATTTTATC+AGG | - | chr5.1:42723798-42723817 | None:intergenic | 5.0% |
| !!! | ATTTAAAATACATAAAATTA+AGG | - | chr5.1:42720286-42720305 | None:intergenic | 5.0% |
| !!! | CTATTTTTTTATTATAAATA+AGG | + | chr5.1:42719275-42719294 | MS.gene96537:intron | 5.0% |
| !!! | CTTTTTATTAATAAAAAATT+TGG | - | chr5.1:42718682-42718701 | None:intergenic | 5.0% |
| AAAGGGTTACCTGCTGTAGC+AGG | - | chr5.1:42721687-42721706 | None:intergenic | 50.0% | |
| AAATCTCGCGAGATGCTGCA+TGG | + | chr5.1:42718515-42718534 | MS.gene96537:CDS | 50.0% | |
| AGATCAGTAGCTACGTGCAG+GGG | - | chr5.1:42720334-42720353 | None:intergenic | 50.0% | |
| AGTGGTATTGCCACCTATGG+TGG | + | chr5.1:42718723-42718742 | MS.gene96537:intron | 50.0% | |
| CAAGATCAGTAGCTACGTGC+AGG | - | chr5.1:42720336-42720355 | None:intergenic | 50.0% | |
| CCACTCTACACCCTTCATGT+TGG | - | chr5.1:42718708-42718727 | None:intergenic | 50.0% | |
| CGAGGGAGAAAAGGGAGAAA+AGG | + | chr5.1:42718552-42718571 | MS.gene96537:CDS | 50.0% | |
| CTGCAGGAAAAGAAGCTGGT+AGG | + | chr5.1:42722798-42722817 | MS.gene96537:intron | 50.0% | |
| GCTACAGCAGGTAACCCTTT+AGG | + | chr5.1:42721687-42721706 | MS.gene96537:intron | 50.0% | |
| GCTCAGGGACGGATCTATTT+AGG | + | chr5.1:42719217-42719236 | MS.gene96537:intron | 50.0% | |
| GGAGAATCGAAGATCGACGA+CGG | + | chr5.1:42718484-42718503 | MS.gene96537:CDS | 50.0% | |
| GGTGATCGGTGGCTAAGTAA+CGG | + | chr5.1:42719765-42719784 | MS.gene96537:intron | 50.0% | |
| TACCCTTTAGCACGAGCATG+GGG | - | chr5.1:42719973-42719992 | None:intergenic | 50.0% | |
| TCATGACAAGCTTAGGCAGC+AGG | - | chr5.1:42719073-42719092 | None:intergenic | 50.0% | |
| TCTACTCTCCGCCTTATGCT+TGG | + | chr5.1:42721992-42722011 | MS.gene96537:intron | 50.0% | |
| ! | CCAACATGAAGGGTGTAGAG+TGG | + | chr5.1:42718705-42718724 | MS.gene96537:intron | 50.0% |
| ! | TCGTTTCCTTGGTCTTCTGC+AGG | + | chr5.1:42722782-42722801 | MS.gene96537:CDS | 50.0% |
| ! | TGGCGGACGGAAAAATTGTG+AGG | - | chr5.1:42723572-42723591 | None:intergenic | 50.0% |
| !!! | GATCGGGATGCTTTTTCCTG+GGG | + | chr5.1:42723212-42723231 | MS.gene96537:CDS | 50.0% |
| AATAGATCCGTCCCTGAGCG+CGG | - | chr5.1:42719216-42719235 | None:intergenic | 55.0% | |
| CACGTGGCAGAGTTTAGCGT+TGG | + | chr5.1:42719152-42719171 | MS.gene96537:intron | 55.0% | |
| GCCACGGCGTTATATCATGG+CGG | + | chr5.1:42722198-42722217 | MS.gene96537:intron | 55.0% | |
| GCTGCATGGAGTAATCACGG+CGG | + | chr5.1:42718529-42718548 | MS.gene96537:CDS | 55.0% | |
| GTCGCCACGGCGTTATATCA+TGG | + | chr5.1:42722195-42722214 | MS.gene96537:intron | 55.0% | |
| TCCCTGAGCGCGGAAATACA+GGG | - | chr5.1:42719206-42719225 | None:intergenic | 55.0% | |
| TCCCTGTATTTCCGCGCTCA+GGG | + | chr5.1:42719202-42719221 | MS.gene96537:intron | 55.0% | |
| TCCGCCATGATATAACGCCG+TGG | - | chr5.1:42722202-42722221 | None:intergenic | 55.0% | |
| TGAGCGCGGAAATACAGGGA+GGG | - | chr5.1:42719202-42719221 | None:intergenic | 55.0% | |
| TGTATTTCCGCGCTCAGGGA+CGG | + | chr5.1:42719206-42719225 | MS.gene96537:intron | 55.0% | |
| ! | ACAAAGCCTGCCGCTTGATC+GGG | + | chr5.1:42723196-42723215 | MS.gene96537:CDS | 55.0% |
| ! | GACAAAGCCTGCCGCTTGAT+CGG | + | chr5.1:42723195-42723214 | MS.gene96537:CDS | 55.0% |
| ! | GGATTTCACATAGGGGCACG+TGG | - | chr5.1:42718959-42718978 | None:intergenic | 55.0% |
| AAGCATCCCGATCAAGCGGC+AGG | - | chr5.1:42723205-42723224 | None:intergenic | 60.0% | |
| ATGGAGTAATCACGGCGGCG+AGG | + | chr5.1:42718534-42718553 | MS.gene96537:CDS | 60.0% | |
| ATGGGGCGGATCTAGGCATG+TGG | - | chr5.1:42719956-42719975 | None:intergenic | 60.0% | |
| CCTTTAGCACGAGCATGGGG+CGG | - | chr5.1:42719970-42719989 | None:intergenic | 60.0% | |
| CGCCCCATGCTCGTGCTAAA+GGG | + | chr5.1:42719968-42719987 | MS.gene96537:intron | 60.0% | |
| CTCCCTGTATTTCCGCGCTC+AGG | + | chr5.1:42719201-42719220 | MS.gene96537:intron | 60.0% | |
| CTGAGCGCGGAAATACAGGG+AGG | - | chr5.1:42719203-42719222 | None:intergenic | 60.0% | |
| GTCCCTGAGCGCGGAAATAC+AGG | - | chr5.1:42719207-42719226 | None:intergenic | 60.0% | |
| TCGAAGATCGACGACGGCGA+CGG | + | chr5.1:42718490-42718509 | MS.gene96537:CDS | 60.0% | |
| TGGAGTAATCACGGCGGCGA+GGG | + | chr5.1:42718535-42718554 | MS.gene96537:CDS | 60.0% | |
| TGGGGCGGATCTAGGCATGT+GGG | - | chr5.1:42719955-42719974 | None:intergenic | 60.0% | |
| ! | GTGCTGTTGCTGCTGCAGAC+TGG | - | chr5.1:42723357-42723376 | None:intergenic | 60.0% |
| !!! | GAGGGTGTTTTTCGCGCAGC+AGG | - | chr5.1:42719184-42719203 | None:intergenic | 60.0% |
| CACGAGCATGGGGCGGATCT+AGG | - | chr5.1:42719963-42719982 | None:intergenic | 65.0% | |
| CACGGCGGCGAGGGAGAAAA+GGG | + | chr5.1:42718544-42718563 | MS.gene96537:CDS | 65.0% | |
| CCGCCCCATGCTCGTGCTAA+AGG | + | chr5.1:42719967-42719986 | MS.gene96537:intron | 65.0% | |
| GGGGCGGATCTAGGCATGTG+GGG | - | chr5.1:42719954-42719973 | None:intergenic | 65.0% | |
| TCACGGCGGCGAGGGAGAAA+AGG | + | chr5.1:42718543-42718562 | MS.gene96537:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 42718472 | 42724018 | 42718472 | ID=MS.gene96537 |
| chr5.1 | mRNA | 42718472 | 42724018 | 42718472 | ID=MS.gene96537.t1;Parent=MS.gene96537 |
| chr5.1 | exon | 42718472 | 42718627 | 42718472 | ID=MS.gene96537.t1.exon1;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42718472 | 42718627 | 42718472 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42720051 | 42720185 | 42720051 | ID=MS.gene96537.t1.exon2;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42720051 | 42720185 | 42720051 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42720642 | 42720695 | 42720642 | ID=MS.gene96537.t1.exon3;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42720642 | 42720695 | 42720642 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42720863 | 42720891 | 42720863 | ID=MS.gene96537.t1.exon4;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42720863 | 42720891 | 42720863 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42722561 | 42722629 | 42722561 | ID=MS.gene96537.t1.exon5;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42722561 | 42722629 | 42722561 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42722731 | 42722815 | 42722731 | ID=MS.gene96537.t1.exon6;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42722731 | 42722815 | 42722731 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42723147 | 42723233 | 42723147 | ID=MS.gene96537.t1.exon7;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42723147 | 42723233 | 42723147 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42723326 | 42723436 | 42723326 | ID=MS.gene96537.t1.exon8;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42723326 | 42723436 | 42723326 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42723726 | 42723779 | 42723726 | ID=MS.gene96537.t1.exon9;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42723726 | 42723779 | 42723726 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| chr5.1 | exon | 42723986 | 42724018 | 42723986 | ID=MS.gene96537.t1.exon10;Parent=MS.gene96537.t1 |
| chr5.1 | CDS | 42723986 | 42724018 | 42723986 | ID=cds.MS.gene96537.t1;Parent=MS.gene96537.t1 |
| Gene Sequence |
| Protein sequence |
