Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96686.t1 | XP_003592487.1 | 99.1 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 4.90E-197 | 696.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96686.t1 | A8X2R2 | 42.3 | 142 | 71 | 5 | 1 | 140 | 1 | 133 | 8.6e-25 | 115.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96686.t1 | G7IET7 | 99.1 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 3.5e-197 | 696.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052494 | MS.gene96686 | 0.801556 | 8.52E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96686.t1 | MTR_1g106530 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96686.t1 | AT2G14835 | 68.696 | 345 | 94 | 5 | 1 | 334 | 1 | 342 | 6.66e-172 | 481 |
| MS.gene96686.t1 | AT2G14835 | 68.696 | 345 | 94 | 5 | 1 | 334 | 1 | 342 | 6.66e-172 | 481 |
Find 82 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGAGCATTGCTTCCTTTC+TGG | 0.064409 | 1.1:-76488964 | MS.gene96686:CDS |
| TCCCGAATCTTTCACGCTTT+TGG | 0.189747 | 1.1:+76490450 | None:intergenic |
| CAGGGCATGCATGGCAACTA+TGG | 0.234748 | 1.1:-76488376 | MS.gene96686:CDS |
| TTTGATCCATCTTTCCTTGC+AGG | 0.244898 | 1.1:+76488908 | None:intergenic |
| CTTCTGATCCATTGATTAGT+AGG | 0.287933 | 1.1:-76489564 | MS.gene96686:CDS |
| GCTTGGCATTGGCAGCATTT+AGG | 0.323299 | 1.1:+76492375 | None:intergenic |
| GAGATAGACGGTGCTAATTC+AGG | 0.324401 | 1.1:-76489472 | MS.gene96686:CDS |
| GGCATGGAAAAGAATATCTT+TGG | 0.336820 | 1.1:-76489643 | MS.gene96686:CDS |
| TCTGTCACTGACAACGAAAC+TGG | 0.344971 | 1.1:+76489613 | None:intergenic |
| CCCAAAAGCGTGAAAGATTC+GGG | 0.362290 | 1.1:-76490451 | MS.gene96686:CDS |
| GATAGCTTACCACGCAGATT+TGG | 0.369392 | 1.1:+76492754 | None:intergenic |
| AGATATTCTCTTACACCAAC+TGG | 0.380780 | 1.1:+76489424 | None:intergenic |
| GTTGAAGGAAGCTATCTTGC+AGG | 0.388901 | 1.1:-76490410 | MS.gene96686:intron |
| GACTAGTACAACGGGGTCCT+GGG | 0.389521 | 1.1:-76488338 | MS.gene96686:CDS |
| TGTACGAACTTCTGAGGTTT+CGG | 0.391409 | 1.1:+76488880 | None:intergenic |
| TCCCAAAAGCGTGAAAGATT+CGG | 0.399151 | 1.1:-76490452 | MS.gene96686:CDS |
| TCGTCTTCATTCCAAGTTGA+AGG | 0.408468 | 1.1:-76490425 | MS.gene96686:CDS |
| ACCACGCAGATTTGGTGCTC+TGG | 0.410092 | 1.1:+76492762 | None:intergenic |
| TATTCAGAATGGGTTATTGA+TGG | 0.410636 | 1.1:-76492414 | MS.gene96686:CDS |
| TTGATTAGTAGGGAAAATCT+TGG | 0.410939 | 1.1:-76489553 | MS.gene96686:CDS |
| TTCCTTGCAGGTGCAGTCAC+TGG | 0.414028 | 1.1:+76488920 | None:intergenic |
| AGACTAGTACAACGGGGTCC+TGG | 0.427228 | 1.1:-76488339 | MS.gene96686:CDS |
| GTATTACAGACTAGTACAAC+GGG | 0.430590 | 1.1:-76488346 | MS.gene96686:CDS |
| CAAGATAGCTTCCTTCAACT+TGG | 0.441693 | 1.1:+76490414 | None:intergenic |
| CCCTTCCTTGTGGTAGCACC+AGG | 0.456807 | 1.1:+76489250 | None:intergenic |
| TTATTGATGGGGAGTATGAT+TGG | 0.463089 | 1.1:-76492401 | MS.gene96686:CDS |
| CTTCTAGAACGGCTTGGCAT+TGG | 0.469839 | 1.1:+76492364 | None:intergenic |
| TTCTGATCCATTGATTAGTA+GGG | 0.483130 | 1.1:-76489563 | MS.gene96686:CDS |
| ATTCAGAATGGGTTATTGAT+GGG | 0.488916 | 1.1:-76492413 | MS.gene96686:CDS |
| TGGCATTGGCAGCATTTAGG+CGG | 0.489781 | 1.1:+76492378 | None:intergenic |
| TATCCTGCTGGGGCAGTATG+TGG | 0.497132 | 1.1:+76492130 | None:intergenic |
| ACTTTCAGTTACAGATATTG+TGG | 0.501532 | 1.1:-76489494 | MS.gene96686:CDS |
| GAAGGACACACATATCCTGC+TGG | 0.504125 | 1.1:+76492118 | None:intergenic |
| CTAAGAAACTTGTGGTGGAA+TGG | 0.507503 | 1.1:+76488983 | None:intergenic |
| CCACGCAGATTTGGTGCTCT+GGG | 0.511130 | 1.1:+76492763 | None:intergenic |
| ACTGCACCTGCAAGGAAAGA+TGG | 0.512141 | 1.1:-76488914 | MS.gene96686:CDS |
| ATCCATTTGCAGGGCATGCA+TGG | 0.515594 | 1.1:-76488385 | MS.gene96686:intron |
| TGTTATCCACACAAATTGCT+TGG | 0.517336 | 1.1:-76492176 | MS.gene96686:CDS |
| CTTAATAATGATGAATTGCA+TGG | 0.525608 | 1.1:-76488306 | MS.gene96686:CDS |
| GATACGGACATATTCAGAAT+GGG | 0.546378 | 1.1:-76492424 | MS.gene96686:CDS |
| TGCCAAGCCGTTCTAGAAGA+GGG | 0.546452 | 1.1:-76492360 | MS.gene96686:CDS |
| CCTCCACATACTGCCCCAGC+AGG | 0.550193 | 1.1:-76492133 | MS.gene96686:CDS |
| GGAAAGTCAGTGTCAGCAGA+TGG | 0.550608 | 1.1:-76489532 | MS.gene96686:CDS |
| GCCAAGCCGTTCTAGAAGAG+GGG | 0.553049 | 1.1:-76492359 | MS.gene96686:CDS |
| GTTCACAAAGTTCCTGTCTG+TGG | 0.555780 | 1.1:-76492801 | MS.gene96686:CDS |
| AGATACGGACATATTCAGAA+TGG | 0.556224 | 1.1:-76492425 | MS.gene96686:CDS |
| GCCTGGTGCTACCACAAGGA+AGG | 0.559496 | 1.1:-76489251 | MS.gene96686:CDS |
| ATGTCGTGTACGAACTTCTG+AGG | 0.560911 | 1.1:+76488874 | None:intergenic |
| CACGACATCAAAAGTCATCA+AGG | 0.563320 | 1.1:-76488859 | MS.gene96686:CDS |
| TTCAGAATGGGTTATTGATG+GGG | 0.569881 | 1.1:-76492412 | MS.gene96686:CDS |
| GGTGCAGTCACTGGAAGAGT+AGG | 0.570101 | 1.1:+76488929 | None:intergenic |
| AAGGACACACATATCCTGCT+GGG | 0.572344 | 1.1:+76492119 | None:intergenic |
| GGCAAAGCACTGGACCAGAA+AGG | 0.574957 | 1.1:+76488950 | None:intergenic |
| CAGATACATTCTCCACAGAC+AGG | 0.580352 | 1.1:+76492789 | None:intergenic |
| AGGGCATGCATGGCAACTAT+GGG | 0.588860 | 1.1:-76488375 | MS.gene96686:CDS |
| TGGAAGAGTAGGCAAAGCAC+TGG | 0.590680 | 1.1:+76488940 | None:intergenic |
| TTCCAGTGACTGCACCTGCA+AGG | 0.590873 | 1.1:-76488922 | MS.gene96686:CDS |
| ATGAAAAGCTCAAGTCCAGT+TGG | 0.593953 | 1.1:-76489439 | MS.gene96686:CDS |
| TGTATTACAGACTAGTACAA+CGG | 0.595900 | 1.1:-76488347 | MS.gene96686:CDS |
| GTGTCCTTCATGTTCAACTT+CGG | 0.599941 | 1.1:-76492104 | MS.gene96686:intron |
| ATGCCAAGCCGTTCTAGAAG+AGG | 0.600749 | 1.1:-76492361 | MS.gene96686:CDS |
| ACATCAAAAGTCATCAAGGA+TGG | 0.600997 | 1.1:-76488855 | MS.gene96686:CDS |
| CCAAGCCGTTCTAGAAGAGG+GGG | 0.607499 | 1.1:-76492358 | MS.gene96686:CDS |
| CCTGGTGCTACCACAAGGAA+GGG | 0.608644 | 1.1:-76489250 | MS.gene96686:CDS |
| ACAGATATTGTGGAGATAGA+CGG | 0.608658 | 1.1:-76489484 | MS.gene96686:CDS |
| TTATTAAGAAGCTCATCCCC+AGG | 0.618095 | 1.1:+76488321 | None:intergenic |
| ACTAGTACAACGGGGTCCTG+GGG | 0.620830 | 1.1:-76488337 | MS.gene96686:CDS |
| CTTACCGAAGTTGAACATGA+AGG | 0.624033 | 1.1:+76492100 | None:intergenic |
| GGATCTGAAACTACTCGACT+CGG | 0.629457 | 1.1:-76492333 | MS.gene96686:CDS |
| ATGGATTGATCCCTTCCTTG+TGG | 0.640632 | 1.1:+76489240 | None:intergenic |
| ATGCTCTAAGAAACTTGTGG+TGG | 0.645972 | 1.1:+76488978 | None:intergenic |
| GGTGGTCTGCAAATGTCGCA+AGG | 0.649874 | 1.1:-76493082 | MS.gene96686:intron |
| TTTAGCCTGGTGCTACCACA+AGG | 0.651460 | 1.1:-76489255 | MS.gene96686:intron |
| GAGAGACCAAGCAATTTGTG+TGG | 0.652514 | 1.1:+76492170 | None:intergenic |
| AAGGAAAGATGGATCAAATG+TGG | 0.655485 | 1.1:-76488903 | MS.gene96686:CDS |
| CCTGCTGGGGCAGTATGTGG+AGG | 0.661513 | 1.1:+76492133 | None:intergenic |
| ATAGACGGTGCTAATTCAGG+AGG | 0.686513 | 1.1:-76489469 | MS.gene96686:CDS |
| GCAATGCTCTAAGAAACTTG+TGG | 0.693603 | 1.1:+76488975 | None:intergenic |
| AGGACACACATATCCTGCTG+GGG | 0.714027 | 1.1:+76492120 | None:intergenic |
| CCCAGAGCACCAAATCTGCG+TGG | 0.718188 | 1.1:-76492763 | MS.gene96686:intron |
| CAAGCCGTTCTAGAAGAGGG+GGG | 0.740108 | 1.1:-76492357 | MS.gene96686:CDS |
| TATTACAGACTAGTACAACG+GGG | 0.851289 | 1.1:-76488345 | MS.gene96686:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAATAGTAAAAAA+AGG | + | chr1.1:76491030-76491049 | None:intergenic | 10.0% |
| !! | ATAAAACAAGAAAAAAATTT+AGG | + | chr1.1:76492033-76492052 | None:intergenic | 10.0% |
| !!! | ATTATTTGAAATTGAAATAA+CGG | + | chr1.1:76488859-76488878 | None:intergenic | 10.0% |
| !! | AAAAGAAAGAACAAAAAATA+AGG | + | chr1.1:76489517-76489536 | None:intergenic | 15.0% |
| !! | AAAGAAAGAACAAAAAATAA+GGG | + | chr1.1:76489516-76489535 | None:intergenic | 15.0% |
| !! | AAATATACACTATTATAATC+TGG | + | chr1.1:76491055-76491074 | None:intergenic | 15.0% |
| !! | TAAATTAATTGAGAATAAGA+TGG | - | chr1.1:76488809-76488828 | MS.gene96686:intron | 15.0% |
| !! | TAATACACATAATGATAAAT+AGG | - | chr1.1:76492606-76492625 | MS.gene96686:intron | 15.0% |
| !! | TCGTTATTACATATTAAAAA+GGG | - | chr1.1:76489131-76489150 | MS.gene96686:intron | 15.0% |
| !! | TTTGCGAAATAATATAATAT+GGG | - | chr1.1:76491277-76491296 | MS.gene96686:intron | 15.0% |
| !!! | GTACATTTTTGTAATAAAAA+AGG | + | chr1.1:76491608-76491627 | None:intergenic | 15.0% |
| !!! | TTATAAAGGTTTTATTTGAA+AGG | + | chr1.1:76489104-76489123 | None:intergenic | 15.0% |
| !! | AATTACAATATTAGTTCAAC+AGG | + | chr1.1:76490786-76490805 | None:intergenic | 20.0% |
| !! | ATAATAATCAACTCCAAATA+TGG | - | chr1.1:76488874-76488893 | MS.gene96686:CDS | 20.0% |
| !! | CACCTGATATATTTATTAAA+TGG | - | chr1.1:76491514-76491533 | MS.gene96686:intron | 20.0% |
| !! | CTAATGCATAAAGAATATAT+AGG | - | chr1.1:76489605-76489624 | MS.gene96686:CDS | 20.0% |
| !! | CTCGTTATTACATATTAAAA+AGG | - | chr1.1:76489130-76489149 | MS.gene96686:intron | 20.0% |
| !! | CTTTGCGAAATAATATAATA+TGG | - | chr1.1:76491276-76491295 | MS.gene96686:intron | 20.0% |
| !! | GTAACATAAATTCATGTAAT+AGG | + | chr1.1:76491337-76491356 | None:intergenic | 20.0% |
| !! | TAGTAATTATTGAGTGAAAA+CGG | + | chr1.1:76488723-76488742 | None:intergenic | 20.0% |
| !! | TATCATTATGTGTATTATAC+AGG | + | chr1.1:76492603-76492622 | None:intergenic | 20.0% |
| !!! | AATCAATAGAAGAATTTTTC+TGG | + | chr1.1:76492554-76492573 | None:intergenic | 20.0% |
| !!! | AGAGTTTTTTTTTCATGTAT+TGG | - | chr1.1:76490821-76490840 | MS.gene96686:intron | 20.0% |
| !!! | ATAATGCTTTTAAAGTAACA+AGG | + | chr1.1:76490475-76490494 | None:intergenic | 20.0% |
| !!! | ATAATGTTTTTAAAGCAACA+AGG | + | chr1.1:76490655-76490674 | None:intergenic | 20.0% |
| !!! | ATCAATAGAAGAATTTTTCT+GGG | + | chr1.1:76492553-76492572 | None:intergenic | 20.0% |
| !!! | TAATTTTTTATGTCTCATGT+GGG | - | chr1.1:76490880-76490899 | MS.gene96686:intron | 20.0% |
| !!! | TTAATTTTTTATGTCTCATG+TGG | - | chr1.1:76490879-76490898 | MS.gene96686:intron | 20.0% |
| !!! | TTTGGGTTTTCTATTAATTT+AGG | - | chr1.1:76488536-76488555 | MS.gene96686:intron | 20.0% |
| !!! | TTTTTTTTCATGTATTGGTA+TGG | - | chr1.1:76490826-76490845 | MS.gene96686:intron | 20.0% |
| ! | AAACCTATATTCCATAATAG+TGG | + | chr1.1:76491157-76491176 | None:intergenic | 25.0% |
| ! | AAAGAAGAGGAAAAAAATTG+TGG | + | chr1.1:76491663-76491682 | None:intergenic | 25.0% |
| ! | AACCTATATTCCATAATAGT+GGG | + | chr1.1:76491156-76491175 | None:intergenic | 25.0% |
| ! | AACTTCAAAATATCGTTCAT+AGG | - | chr1.1:76489426-76489445 | MS.gene96686:intron | 25.0% |
| ! | ATATTTAATGACATGCCTTA+GGG | - | chr1.1:76490493-76490512 | MS.gene96686:intron | 25.0% |
| ! | ATGAATAAAATGAAGAGAGT+GGG | + | chr1.1:76490048-76490067 | None:intergenic | 25.0% |
| ! | CCTAAAAGAAACAAAAATGA+TGG | + | chr1.1:76488675-76488694 | None:intergenic | 25.0% |
| ! | CGCAAAAAATATACAAAAAG+AGG | - | chr1.1:76492217-76492236 | MS.gene96686:intron | 25.0% |
| ! | CGCCATTTAATAAATATATC+AGG | + | chr1.1:76491519-76491538 | None:intergenic | 25.0% |
| ! | CTCATAAGGAATAATGTTAA+GGG | - | chr1.1:76492697-76492716 | MS.gene96686:intron | 25.0% |
| ! | CTTAACATTATTCCTTATGA+GGG | + | chr1.1:76492698-76492717 | None:intergenic | 25.0% |
| ! | CTTAATAATGATGAATTGCA+TGG | - | chr1.1:76493074-76493093 | MS.gene96686:intron | 25.0% |
| ! | GCTTCAAATATCATATAGAT+CGG | - | chr1.1:76488367-76488386 | MS.gene96686:CDS | 25.0% |
| ! | TAATGAAAAGAGAAAAGAAG+AGG | + | chr1.1:76491676-76491695 | None:intergenic | 25.0% |
| ! | TACAAAGTTAGAAGAACTTA+TGG | - | chr1.1:76488505-76488524 | MS.gene96686:intron | 25.0% |
| ! | TATATTTAATGACATGCCTT+AGG | - | chr1.1:76490492-76490511 | MS.gene96686:intron | 25.0% |
| ! | TCTCAGAAAAAAGAAAAGAA+AGG | - | chr1.1:76492855-76492874 | MS.gene96686:intron | 25.0% |
| ! | TTATTGCAAATAATTTAGCC+TGG | - | chr1.1:76492112-76492131 | MS.gene96686:CDS | 25.0% |
| ! | TTTAGGTCTACTCATTATAA+TGG | + | chr1.1:76492016-76492035 | None:intergenic | 25.0% |
| !! | AATATAGGTTTGAAACGATT+GGG | - | chr1.1:76491166-76491185 | MS.gene96686:intron | 25.0% |
| !! | ATAACGAGTTCAAGTTATAA+AGG | + | chr1.1:76489118-76489137 | None:intergenic | 25.0% |
| !! | GTAATACACATTCACAATTT+TGG | - | chr1.1:76490419-76490438 | MS.gene96686:CDS | 25.0% |
| !! | TCAATAGAAGAATTTTTCTG+GGG | + | chr1.1:76492552-76492571 | None:intergenic | 25.0% |
| !!! | ATGATTTGTTGTACTTATGT+AGG | - | chr1.1:76489704-76489723 | MS.gene96686:intron | 25.0% |
| !!! | CCATCATTTTTGTTTCTTTT+AGG | - | chr1.1:76488672-76488691 | MS.gene96686:intron | 25.0% |
| !!! | TTCATTTCTTCGTTATTTTC+TGG | - | chr1.1:76488465-76488484 | MS.gene96686:intron | 25.0% |
| !!! | TTGAGGTTTTAGATAATCAA+GGG | + | chr1.1:76489655-76489674 | None:intergenic | 25.0% |
| AAACGGACAATTACAAAACA+CGG | + | chr1.1:76488706-76488725 | None:intergenic | 30.0% | |
| AAAGAGGGTTACAAGAAAAA+AGG | + | chr1.1:76490380-76490399 | None:intergenic | 30.0% | |
| AAATCATGACAATATTCGCT+AGG | + | chr1.1:76489691-76489710 | None:intergenic | 30.0% | |
| AACAGAGTTACAATTCACAT+TGG | + | chr1.1:76492057-76492076 | None:intergenic | 30.0% | |
| AACTAACTCCAGTAGTTATA+AGG | - | chr1.1:76490269-76490288 | MS.gene96686:intron | 30.0% | |
| AAGAGGGTTACAAGAAAAAA+GGG | + | chr1.1:76490379-76490398 | None:intergenic | 30.0% | |
| AAGCACAGTATGTATTTGAA+AGG | - | chr1.1:76490538-76490557 | MS.gene96686:intron | 30.0% | |
| AATAATGTTAAGGGTGATGT+GGG | - | chr1.1:76492706-76492725 | MS.gene96686:intron | 30.0% | |
| ACTTTCAGTTACAGATATTG+TGG | - | chr1.1:76491886-76491905 | MS.gene96686:intron | 30.0% | |
| AGAAGAAACTTATCATACAC+TGG | - | chr1.1:76491092-76491111 | MS.gene96686:intron | 30.0% | |
| AGCAAACAGAGATTGAAATT+AGG | + | chr1.1:76488350-76488369 | None:intergenic | 30.0% | |
| AGTGTATGATAAGTTTCTTC+TGG | + | chr1.1:76491093-76491112 | None:intergenic | 30.0% | |
| ATACTACACAGGCAATAAAA+TGG | + | chr1.1:76492754-76492773 | None:intergenic | 30.0% | |
| ATATTTCAGTCCCACTATTA+TGG | - | chr1.1:76491143-76491162 | MS.gene96686:intron | 30.0% | |
| CAGAATAGCAATATCCTTAT+AGG | + | chr1.1:76490115-76490134 | None:intergenic | 30.0% | |
| CCTCATAAGGAATAATGTTA+AGG | - | chr1.1:76492696-76492715 | MS.gene96686:intron | 30.0% | |
| CCTTAACATTATTCCTTATG+AGG | + | chr1.1:76492699-76492718 | None:intergenic | 30.0% | |
| GAAAGACTGAAAACATTTGA+AGG | + | chr1.1:76489311-76489330 | None:intergenic | 30.0% | |
| GATGAATAAAATGAAGAGAG+TGG | + | chr1.1:76490049-76490068 | None:intergenic | 30.0% | |
| GCAAACAGAGATTGAAATTA+GGG | + | chr1.1:76488349-76488368 | None:intergenic | 30.0% | |
| GTATATTCCCATATGGTTAA+AGG | - | chr1.1:76492770-76492789 | MS.gene96686:CDS | 30.0% | |
| TACTGAATCACTATGAAAGA+GGG | + | chr1.1:76490395-76490414 | None:intergenic | 30.0% | |
| TATGTGTATTATACAGGAAG+AGG | + | chr1.1:76492597-76492616 | None:intergenic | 30.0% | |
| TATTTAATGACATGCCTTAG+GGG | - | chr1.1:76490494-76490513 | MS.gene96686:intron | 30.0% | |
| TCCAGTAGTTATAAGGAATA+GGG | - | chr1.1:76490276-76490295 | MS.gene96686:intron | 30.0% | |
| TGAATAAAATGAAGAGAGTG+GGG | + | chr1.1:76490047-76490066 | None:intergenic | 30.0% | |
| TGTAGATAGAAACTCCTATA+AGG | - | chr1.1:76490098-76490117 | MS.gene96686:intron | 30.0% | |
| TGTATTACAGACTAGTACAA+CGG | - | chr1.1:76493033-76493052 | MS.gene96686:intron | 30.0% | |
| TGTTTATGAATGTATCCATC+TGG | - | chr1.1:76491471-76491490 | MS.gene96686:intron | 30.0% | |
| TTACTGAATCACTATGAAAG+AGG | + | chr1.1:76490396-76490415 | None:intergenic | 30.0% | |
| TTAGAAGAACTTATGGAATG+TGG | - | chr1.1:76488512-76488531 | MS.gene96686:intron | 30.0% | |
| TTATAAGGAATAGGGGATAA+TGG | - | chr1.1:76490284-76490303 | MS.gene96686:intron | 30.0% | |
| TTGAACAAAGTGTACAAACA+GGG | - | chr1.1:76489462-76489481 | MS.gene96686:CDS | 30.0% | |
| TTGAATAGATCGTCAGAATA+AGG | + | chr1.1:76488433-76488452 | None:intergenic | 30.0% | |
| TTGATTAGTAGGGAAAATCT+TGG | - | chr1.1:76491827-76491846 | MS.gene96686:intron | 30.0% | |
| ! | AACTTATGGAATGTGGTTTT+GGG | - | chr1.1:76488519-76488538 | MS.gene96686:intron | 30.0% |
| ! | AAGGATATTGCTATTCTGAT+AGG | - | chr1.1:76490117-76490136 | MS.gene96686:intron | 30.0% |
| ! | AGATTTTCCCTACTAATCAA+TGG | + | chr1.1:76491827-76491846 | None:intergenic | 30.0% |
| ! | AGTTGTTATTATCCATTTGC+AGG | - | chr1.1:76492985-76493004 | MS.gene96686:intron | 30.0% |
| ! | ATTCTTTATGCATTAGCTTG+AGG | + | chr1.1:76489601-76489620 | None:intergenic | 30.0% |
| ! | CATGCTTTTAATGTAGATAG+TGG | - | chr1.1:76489371-76489390 | MS.gene96686:intron | 30.0% |
| ! | CATGTATGTTATCTAAGACA+AGG | + | chr1.1:76490684-76490703 | None:intergenic | 30.0% |
| ! | GAATATAGGTTTGAAACGAT+TGG | - | chr1.1:76491165-76491184 | MS.gene96686:intron | 30.0% |
| ! | GGGAAAATAACATGACATTT+TGG | + | chr1.1:76489496-76489515 | None:intergenic | 30.0% |
| ! | GGTTACAATATTAGTTTGAC+AGG | + | chr1.1:76490620-76490639 | None:intergenic | 30.0% |
| ! | GTTGTTATTATCCATTTGCA+GGG | - | chr1.1:76492986-76493005 | MS.gene96686:intron | 30.0% |
| ! | TACATTAAAAGCATGTACAC+AGG | + | chr1.1:76489366-76489385 | None:intergenic | 30.0% |
| ! | TAGATAGTGGTTATGTTATG+TGG | - | chr1.1:76489384-76489403 | MS.gene96686:intron | 30.0% |
| ! | TATCTAAAACCTCAAGCTAA+TGG | - | chr1.1:76489660-76489679 | MS.gene96686:intron | 30.0% |
| ! | TTCTGATCCATTGATTAGTA+GGG | - | chr1.1:76491817-76491836 | MS.gene96686:intron | 30.0% |
| !! | ATGAGATTTCAGAGTTTTGT+CGG | + | chr1.1:76492171-76492190 | None:intergenic | 30.0% |
| !! | ATGTTTAGAAGGTGGATTTT+TGG | - | chr1.1:76489927-76489946 | MS.gene96686:intron | 30.0% |
| !! | ATTCAGAATGGGTTATTGAT+GGG | - | chr1.1:76488967-76488986 | MS.gene96686:CDS | 30.0% |
| !! | ATTTTCCTCTTTGAAAGTGT+AGG | - | chr1.1:76492373-76492392 | MS.gene96686:CDS | 30.0% |
| !! | TATTCAGAATGGGTTATTGA+TGG | - | chr1.1:76488966-76488985 | MS.gene96686:CDS | 30.0% |
| !!! | CACGGATCTATTTTTATAGT+GGG | - | chr1.1:76491562-76491581 | MS.gene96686:intron | 30.0% |
| !!! | CTTGAGGTTTTAGATAATCA+AGG | + | chr1.1:76489656-76489675 | None:intergenic | 30.0% |
| !!! | TGAGGTTTTAGATAATCAAG+GGG | + | chr1.1:76489654-76489673 | None:intergenic | 30.0% |
| AAGGAAAGATGGATCAAATG+TGG | - | chr1.1:76492477-76492496 | MS.gene96686:intron | 35.0% | |
| AATGGATCAGAAGAAAAAGC+AGG | + | chr1.1:76491809-76491828 | None:intergenic | 35.0% | |
| ACAACATCATGTTTAGAAGG+TGG | - | chr1.1:76489919-76489938 | MS.gene96686:intron | 35.0% | |
| ACAAGCTCCTTTAACCATAT+GGG | + | chr1.1:76492780-76492799 | None:intergenic | 35.0% | |
| ACAGATATTGTGGAGATAGA+CGG | - | chr1.1:76491896-76491915 | MS.gene96686:intron | 35.0% | |
| ACATCAAAAGTCATCAAGGA+TGG | - | chr1.1:76492525-76492544 | MS.gene96686:intron | 35.0% | |
| AGAGGGTTACAAGAAAAAAG+GGG | + | chr1.1:76490378-76490397 | None:intergenic | 35.0% | |
| AGATACATGGCGGTTATAAT+AGG | + | chr1.1:76489889-76489908 | None:intergenic | 35.0% | |
| AGATACGGACATATTCAGAA+TGG | - | chr1.1:76488955-76488974 | MS.gene96686:CDS | 35.0% | |
| AGATATTCTCTTACACCAAC+TGG | + | chr1.1:76491959-76491978 | None:intergenic | 35.0% | |
| AGTAAACCTTGAGAACTTTC+AGG | + | chr1.1:76490164-76490183 | None:intergenic | 35.0% | |
| ATAATGTTAAGGGTGATGTG+GGG | - | chr1.1:76492707-76492726 | MS.gene96686:intron | 35.0% | |
| ATATGGTTAAAGGAGCTTGT+AGG | - | chr1.1:76492780-76492799 | MS.gene96686:CDS | 35.0% | |
| ATGTAATCAATAGCTGCACA+AGG | + | chr1.1:76489160-76489179 | None:intergenic | 35.0% | |
| ATGTCGTAAAATCAGAAGTC+TGG | - | chr1.1:76489764-76489783 | MS.gene96686:intron | 35.0% | |
| ATTACAATAGCAGTTCGAAC+AGG | + | chr1.1:76490570-76490589 | None:intergenic | 35.0% | |
| ATTTAATGACATGCCTTAGG+GGG | - | chr1.1:76490495-76490514 | MS.gene96686:intron | 35.0% | |
| CAACACTATACAATAGTTCG+AGG | + | chr1.1:76489803-76489822 | None:intergenic | 35.0% | |
| CATATGGGAATATACTACAC+AGG | + | chr1.1:76492765-76492784 | None:intergenic | 35.0% | |
| CCACTATAAAAATAGATCCG+TGG | + | chr1.1:76491564-76491583 | None:intergenic | 35.0% | |
| CCAGTAGTTATAAGGAATAG+GGG | - | chr1.1:76490277-76490296 | MS.gene96686:intron | 35.0% | |
| CTAGCAGTAGACTACATAAT+TGG | + | chr1.1:76492951-76492970 | None:intergenic | 35.0% | |
| CTCCAGTAGTTATAAGGAAT+AGG | - | chr1.1:76490275-76490294 | MS.gene96686:intron | 35.0% | |
| CTGGCAAAAAATTCACAATG+GGG | + | chr1.1:76489848-76489867 | None:intergenic | 35.0% | |
| CTGGTTATAATTCTGTGTGT+TGG | - | chr1.1:76490318-76490337 | MS.gene96686:intron | 35.0% | |
| CTGTGTAGTATATTCCCATA+TGG | - | chr1.1:76492763-76492782 | MS.gene96686:intron | 35.0% | |
| CTGTTTGTACACTTTGTTCA+AGG | + | chr1.1:76489463-76489482 | None:intergenic | 35.0% | |
| CTTGAACAAAGTGTACAAAC+AGG | - | chr1.1:76489461-76489480 | MS.gene96686:CDS | 35.0% | |
| GAACAGACAGTTCTATATAC+AGG | + | chr1.1:76492929-76492948 | None:intergenic | 35.0% | |
| GAATAATGTTAAGGGTGATG+TGG | - | chr1.1:76492705-76492724 | MS.gene96686:intron | 35.0% | |
| GACACTAGCAATCTTCTTTA+TGG | + | chr1.1:76489568-76489587 | None:intergenic | 35.0% | |
| GATACGGACATATTCAGAAT+GGG | - | chr1.1:76488956-76488975 | MS.gene96686:CDS | 35.0% | |
| GCTGGCAAAAAATTCACAAT+GGG | + | chr1.1:76489849-76489868 | None:intergenic | 35.0% | |
| GGAAAAAAATTGTGGTGCAT+AGG | + | chr1.1:76491655-76491674 | None:intergenic | 35.0% | |
| GGCATGGAAAAGAATATCTT+TGG | - | chr1.1:76491737-76491756 | MS.gene96686:intron | 35.0% | |
| GTAGAATTCCATAATGTCTC+TGG | - | chr1.1:76491225-76491244 | MS.gene96686:intron | 35.0% | |
| GTATTACAGACTAGTACAAC+GGG | - | chr1.1:76493034-76493053 | MS.gene96686:intron | 35.0% | |
| GTCCCACTATTATGGAATAT+AGG | - | chr1.1:76491151-76491170 | MS.gene96686:intron | 35.0% | |
| TACAAGCTCCTTTAACCATA+TGG | + | chr1.1:76492781-76492800 | None:intergenic | 35.0% | |
| TATTACAGACTAGTACAACG+GGG | - | chr1.1:76493035-76493054 | MS.gene96686:intron | 35.0% | |
| TCAATATTTGTGATGCACCA+CGG | - | chr1.1:76491544-76491563 | MS.gene96686:intron | 35.0% | |
| TGTTATCCACACAAATTGCT+TGG | - | chr1.1:76489204-76489223 | MS.gene96686:CDS | 35.0% | |
| TTCTCAAGGTTTACTCTCAT+AGG | - | chr1.1:76490169-76490188 | MS.gene96686:intron | 35.0% | |
| TTTGTCGTCTTTCACAGATA+CGG | - | chr1.1:76488940-76488959 | MS.gene96686:CDS | 35.0% | |
| ! | CCAAAAATGAGTTTTCCAGA+TGG | + | chr1.1:76491489-76491508 | None:intergenic | 35.0% |
| ! | CCATCTGGAAAACTCATTTT+TGG | - | chr1.1:76491486-76491505 | MS.gene96686:intron | 35.0% |
| ! | CTTCTGATCCATTGATTAGT+AGG | - | chr1.1:76491816-76491835 | MS.gene96686:intron | 35.0% |
| ! | GAACTTATGGAATGTGGTTT+TGG | - | chr1.1:76488518-76488537 | MS.gene96686:intron | 35.0% |
| ! | GGGACTTCAATGATTTTTAC+TGG | - | chr1.1:76491186-76491205 | MS.gene96686:intron | 35.0% |
| ! | TTATTGATGGGGAGTATGAT+TGG | - | chr1.1:76488979-76488998 | MS.gene96686:CDS | 35.0% |
| ! | TTTATAGTGGGAGATTGTTC+TGG | - | chr1.1:76491574-76491593 | MS.gene96686:intron | 35.0% |
| !! | TTACCTACTTTTGTGTAGAC+TGG | - | chr1.1:76491716-76491735 | MS.gene96686:intron | 35.0% |
| !! | TTCAGAATGGGTTATTGATG+GGG | - | chr1.1:76488968-76488987 | MS.gene96686:CDS | 35.0% |
| !!! | CCACGGATCTATTTTTATAG+TGG | - | chr1.1:76491561-76491580 | MS.gene96686:intron | 35.0% |
| AAACATGATGTTGTCGCCTA+TGG | + | chr1.1:76489913-76489932 | None:intergenic | 40.0% | |
| AAAGGTCCAAAAGCTTTCTG+AGG | - | chr1.1:76490195-76490214 | MS.gene96686:intron | 40.0% | |
| ATACAATAGTTCGAGGAACC+TGG | + | chr1.1:76489796-76489815 | None:intergenic | 40.0% | |
| ATATCGTTCATAGGCGTTCT+AGG | - | chr1.1:76489435-76489454 | MS.gene96686:intron | 40.0% | |
| ATGAAAAGCTCAAGTCCAGT+TGG | - | chr1.1:76491941-76491960 | MS.gene96686:intron | 40.0% | |
| ATGCCAGTCTACACAAAAGT+AGG | + | chr1.1:76491722-76491741 | None:intergenic | 40.0% | |
| ATGGACCTACACTTTCAAAG+AGG | + | chr1.1:76492381-76492400 | None:intergenic | 40.0% | |
| CAAGATAGCTTCCTTCAACT+TGG | + | chr1.1:76490969-76490988 | None:intergenic | 40.0% | |
| CACGACATCAAAAGTCATCA+AGG | - | chr1.1:76492521-76492540 | MS.gene96686:intron | 40.0% | |
| CAGCAACTTAACGATTTCTG+CGG | - | chr1.1:76491440-76491459 | MS.gene96686:intron | 40.0% | |
| CCCCTATTCCTTATAACTAC+TGG | + | chr1.1:76490280-76490299 | None:intergenic | 40.0% | |
| CTTACCGAAGTTGAACATGA+AGG | + | chr1.1:76489283-76489302 | None:intergenic | 40.0% | |
| CTTATGAGACTGGCACTATT+TGG | - | chr1.1:76490996-76491015 | MS.gene96686:intron | 40.0% | |
| GACAAAGACCAGAGACATTA+TGG | + | chr1.1:76491236-76491255 | None:intergenic | 40.0% | |
| GCGACAACATCATGTTTAGA+AGG | - | chr1.1:76489916-76489935 | MS.gene96686:intron | 40.0% | |
| GGCTGGCAAAAAATTCACAA+TGG | + | chr1.1:76489850-76489869 | None:intergenic | 40.0% | |
| GTGTCCTTCATGTTCAACTT+CGG | - | chr1.1:76489276-76489295 | MS.gene96686:intron | 40.0% | |
| TCAGTGTTATCAACTGTGGA+TGG | + | chr1.1:76489974-76489993 | None:intergenic | 40.0% | |
| TCGTAAAATCAGAAGTCTGG+TGG | - | chr1.1:76489767-76489786 | MS.gene96686:intron | 40.0% | |
| TGAAACAACTCGTGCAGATA+TGG | - | chr1.1:76490903-76490922 | MS.gene96686:intron | 40.0% | |
| TGTCAACATTCTTCACTGTC+AGG | - | chr1.1:76491301-76491320 | MS.gene96686:intron | 40.0% | |
| TGTGGATGGCATAGTAGATA+TGG | + | chr1.1:76489960-76489979 | None:intergenic | 40.0% | |
| TTATTAAGAAGCTCATCCCC+AGG | + | chr1.1:76493062-76493081 | None:intergenic | 40.0% | |
| TTGCAGGTAACTTATGAGAC+TGG | - | chr1.1:76490986-76491005 | MS.gene96686:intron | 40.0% | |
| TTGTAACTCTGTTGTGCGTT+TGG | - | chr1.1:76492064-76492083 | MS.gene96686:intron | 40.0% | |
| TTTGATCCATCTTTCCTTGC+AGG | + | chr1.1:76492475-76492494 | None:intergenic | 40.0% | |
| ! | AACTAAAAGTGCGATAGGTG+TGG | + | chr1.1:76491420-76491439 | None:intergenic | 40.0% |
| ! | ACTAAAAGTGCGATAGGTGT+GGG | + | chr1.1:76491419-76491438 | None:intergenic | 40.0% |
| ! | ACTTTTCATGTAACCCCCTA+AGG | + | chr1.1:76490511-76490530 | None:intergenic | 40.0% |
| ! | CAGAAAGCTTTTGGACCTTT+CGG | + | chr1.1:76490195-76490214 | None:intergenic | 40.0% |
| ! | CTAAGAAACTTGTGGTGGAA+TGG | + | chr1.1:76492400-76492419 | None:intergenic | 40.0% |
| ! | CTAATGCCTCAGAAAGCTTT+TGG | + | chr1.1:76490204-76490223 | None:intergenic | 40.0% |
| ! | GCAACAAGGCATTAAAAGCA+TGG | + | chr1.1:76490641-76490660 | None:intergenic | 40.0% |
| ! | TACTTTTGTGTAGACTGGCA+TGG | - | chr1.1:76491721-76491740 | MS.gene96686:intron | 40.0% |
| ! | TAGGACAAACCATTAGCTTG+AGG | + | chr1.1:76489672-76489691 | None:intergenic | 40.0% |
| ! | TCCCAAAAGCGTGAAAGATT+CGG | - | chr1.1:76490928-76490947 | MS.gene96686:intron | 40.0% |
| ! | TCGTCTTCATTCCAAGTTGA+AGG | - | chr1.1:76490955-76490974 | MS.gene96686:intron | 40.0% |
| ! | TCTTTTGTGCAGAACTTGTC+TGG | - | chr1.1:76492332-76492351 | MS.gene96686:CDS | 40.0% |
| ! | TGCTGAACTAAAAGTGCGAT+AGG | + | chr1.1:76491425-76491444 | None:intergenic | 40.0% |
| !! | ATGCTCTAAGAAACTTGTGG+TGG | + | chr1.1:76492405-76492424 | None:intergenic | 40.0% |
| !! | CAAAAGCTTTCTGAGGCATT+AGG | - | chr1.1:76490202-76490221 | MS.gene96686:intron | 40.0% |
| !! | GCAATGCTCTAAGAAACTTG+TGG | + | chr1.1:76492408-76492427 | None:intergenic | 40.0% |
| !! | TCCACAGTTGATAACACTGA+CGG | - | chr1.1:76489974-76489993 | MS.gene96686:intron | 40.0% |
| !! | TGTACGAACTTCTGAGGTTT+CGG | + | chr1.1:76492503-76492522 | None:intergenic | 40.0% |
| !! | TTAGAGCATTGCTTCCTTTC+TGG | - | chr1.1:76492416-76492435 | MS.gene96686:CDS | 40.0% |
| !!! | AATTTTTTGCCAGCCTCCAT+AGG | - | chr1.1:76489855-76489874 | MS.gene96686:intron | 40.0% |
| !!! | TTAGAAGGTGGATTTTTGGC+TGG | - | chr1.1:76489931-76489950 | MS.gene96686:intron | 40.0% |
| AACCCATAAACACCACAGCT+CGG | + | chr1.1:76488905-76488924 | None:intergenic | 45.0% | |
| AACCGCCATGTATCTACCAT+AGG | - | chr1.1:76489894-76489913 | MS.gene96686:intron | 45.0% | |
| AAGGACACACATATCCTGCT+GGG | + | chr1.1:76489264-76489283 | None:intergenic | 45.0% | |
| AATATGGTTGTACCGAGCTG+TGG | - | chr1.1:76488890-76488909 | MS.gene96686:CDS | 45.0% | |
| ACCGTCAGTGTTATCAACTG+TGG | + | chr1.1:76489978-76489997 | None:intergenic | 45.0% | |
| ATGAGACTGGCACTATTTGG+CGG | - | chr1.1:76490999-76491018 | MS.gene96686:intron | 45.0% | |
| ATGTCATCTGCTGTTCATGC+TGG | - | chr1.1:76492299-76492318 | MS.gene96686:intron | 45.0% | |
| ATGTCGTGTACGAACTTCTG+AGG | + | chr1.1:76492509-76492528 | None:intergenic | 45.0% | |
| CAGATACATTCTCCACAGAC+AGG | + | chr1.1:76488594-76488613 | None:intergenic | 45.0% | |
| CAGCTCGGTACAACCATATT+TGG | + | chr1.1:76488890-76488909 | None:intergenic | 45.0% | |
| GAGAGACCAAGCAATTTGTG+TGG | + | chr1.1:76489213-76489232 | None:intergenic | 45.0% | |
| GATAGCTTACCACGCAGATT+TGG | + | chr1.1:76488629-76488648 | None:intergenic | 45.0% | |
| GCGGGAGTCTGAATTAGTAA+TGG | - | chr1.1:76490237-76490256 | MS.gene96686:intron | 45.0% | |
| GGATCAGAAGAAAAAGCAGG+AGG | + | chr1.1:76491806-76491825 | None:intergenic | 45.0% | |
| GGATGGCATAGTAGATATGG+TGG | + | chr1.1:76489957-76489976 | None:intergenic | 45.0% | |
| GTTCACAAAGTTCCTGTCTG+TGG | - | chr1.1:76488579-76488598 | MS.gene96686:intron | 45.0% | |
| GTTGAAGGAAGCTATCTTGC+AGG | - | chr1.1:76490970-76490989 | MS.gene96686:intron | 45.0% | |
| GTTTACTCTCATAGGCCGAA+AGG | - | chr1.1:76490177-76490196 | MS.gene96686:intron | 45.0% | |
| TAACACTGACGGTACAAGCT+AGG | - | chr1.1:76489985-76490004 | MS.gene96686:intron | 45.0% | |
| TACCGAGCTGTGGTGTTTAT+GGG | - | chr1.1:76488900-76488919 | MS.gene96686:CDS | 45.0% | |
| TCAGAAGAAAAAGCAGGAGG+AGG | + | chr1.1:76491803-76491822 | None:intergenic | 45.0% | |
| TCTGTCACTGACAACGAAAC+TGG | + | chr1.1:76491770-76491789 | None:intergenic | 45.0% | |
| TGTCGCCTATGGTAGATACA+TGG | + | chr1.1:76489902-76489921 | None:intergenic | 45.0% | |
| TTGGAGACGAGAGTTAACTC+TGG | - | chr1.1:76490337-76490356 | MS.gene96686:intron | 45.0% | |
| ! | ATAATAGGTGTTGCGGCCTA+TGG | + | chr1.1:76489874-76489893 | None:intergenic | 45.0% |
| ! | ATAGACGGTGCTAATTCAGG+AGG | - | chr1.1:76491911-76491930 | MS.gene96686:intron | 45.0% |
| ! | ATGGATTGATCCCTTCCTTG+TGG | + | chr1.1:76492143-76492162 | None:intergenic | 45.0% |
| ! | CCCAAAAGCGTGAAAGATTC+GGG | - | chr1.1:76490929-76490948 | MS.gene96686:intron | 45.0% |
| ! | CCCGAATCTTTCACGCTTTT+GGG | + | chr1.1:76490932-76490951 | None:intergenic | 45.0% |
| ! | GAATCTTTCACGCTTTTGGG+AGG | + | chr1.1:76490929-76490948 | None:intergenic | 45.0% |
| ! | GAGATAGACGGTGCTAATTC+AGG | - | chr1.1:76491908-76491927 | MS.gene96686:intron | 45.0% |
| ! | GGATCTGAAACTACTCGACT+CGG | - | chr1.1:76489047-76489066 | MS.gene96686:intron | 45.0% |
| ! | GGCGGTTATAATAGGTGTTG+CGG | + | chr1.1:76489881-76489900 | None:intergenic | 45.0% |
| ! | GTGACTTGTAAGCCCTCATA+AGG | - | chr1.1:76492683-76492702 | MS.gene96686:intron | 45.0% |
| ! | TCCCGAATCTTTCACGCTTT+TGG | + | chr1.1:76490933-76490952 | None:intergenic | 45.0% |
| !! | AAGCTTTCTGAGGCATTAGG+AGG | - | chr1.1:76490205-76490224 | MS.gene96686:intron | 45.0% |
| !! | AGAGTTAACTCTGGCTTGGA+AGG | - | chr1.1:76490346-76490365 | MS.gene96686:intron | 45.0% |
| !! | AGCTTTCTGAGGCATTAGGA+GGG | - | chr1.1:76490206-76490225 | MS.gene96686:intron | 45.0% |
| !! | AGGAATAGGGGATAATGGAG+AGG | - | chr1.1:76490289-76490308 | MS.gene96686:intron | 45.0% |
| !! | CAGAGTTTTGTCGGTCAACA+TGG | + | chr1.1:76492162-76492181 | None:intergenic | 45.0% |
| !! | CTGTTCATGCTGGCTTTCTT+TGG | - | chr1.1:76492309-76492328 | MS.gene96686:intron | 45.0% |
| !! | GAATAGGGGATAATGGAGAG+GGG | - | chr1.1:76490291-76490310 | MS.gene96686:intron | 45.0% |
| !! | GAGTTAACTCTGGCTTGGAA+GGG | - | chr1.1:76490347-76490366 | MS.gene96686:intron | 45.0% |
| !! | GGAATAGGGGATAATGGAGA+GGG | - | chr1.1:76490290-76490309 | MS.gene96686:intron | 45.0% |
| ACTGCACCTGCAAGGAAAGA+TGG | - | chr1.1:76492466-76492485 | MS.gene96686:intron | 50.0% | |
| AGAGAGTGGGGTTGAGAACT+TGG | + | chr1.1:76490035-76490054 | None:intergenic | 50.0% | |
| AGGACACACATATCCTGCTG+GGG | + | chr1.1:76489263-76489282 | None:intergenic | 50.0% | |
| AGGCATTAGGAGGGAGTTGT+AGG | - | chr1.1:76490215-76490234 | MS.gene96686:intron | 50.0% | |
| AGGGCATGCATGGCAACTAT+GGG | - | chr1.1:76493005-76493024 | MS.gene96686:intron | 50.0% | |
| ATAGGATCCCACACAACCCA+GGG | - | chr1.1:76490135-76490154 | MS.gene96686:intron | 50.0% | |
| ATCCATTTGCAGGGCATGCA+TGG | - | chr1.1:76492995-76493014 | MS.gene96686:intron | 50.0% | |
| ATTAGGAGGGAGTTGTAGGC+GGG | - | chr1.1:76490219-76490238 | MS.gene96686:intron | 50.0% | |
| CATTAGGAGGGAGTTGTAGG+CGG | - | chr1.1:76490218-76490237 | MS.gene96686:intron | 50.0% | |
| CGCCTATGGTAGATACATGG+CGG | + | chr1.1:76489899-76489918 | None:intergenic | 50.0% | |
| GAAGGACACACATATCCTGC+TGG | + | chr1.1:76489265-76489284 | None:intergenic | 50.0% | |
| GACGAGAGTTAACTCTGGCT+TGG | - | chr1.1:76490342-76490361 | MS.gene96686:intron | 50.0% | |
| GAGAGTGGGGTTGAGAACTT+GGG | + | chr1.1:76490034-76490053 | None:intergenic | 50.0% | |
| GGAAAGTCAGTGTCAGCAGA+TGG | - | chr1.1:76491848-76491867 | MS.gene96686:intron | 50.0% | |
| GTACCGAGCTGTGGTGTTTA+TGG | - | chr1.1:76488899-76488918 | MS.gene96686:CDS | 50.0% | |
| TGAGACTGGCACTATTTGGC+GGG | - | chr1.1:76491000-76491019 | MS.gene96686:intron | 50.0% | |
| TGGAAGAGTAGGCAAAGCAC+TGG | + | chr1.1:76492443-76492462 | None:intergenic | 50.0% | |
| TTCACAATGGGGTAACACCG+TGG | + | chr1.1:76489837-76489856 | None:intergenic | 50.0% | |
| ! | GTAACACCGTGGCGGAAATT+GGG | + | chr1.1:76489826-76489845 | None:intergenic | 50.0% |
| !! | ATGCCAAGCCGTTCTAGAAG+AGG | - | chr1.1:76489019-76489038 | MS.gene96686:intron | 50.0% |
| !! | CTTCTAGAACGGCTTGGCAT+TGG | + | chr1.1:76489019-76489038 | None:intergenic | 50.0% |
| !! | GATAATGGAGAGGGGTATGC+TGG | - | chr1.1:76490299-76490318 | MS.gene96686:intron | 50.0% |
| !! | GCTTGGCATTGGCAGCATTT+AGG | + | chr1.1:76489008-76489027 | None:intergenic | 50.0% |
| !! | TGCCAAGCCGTTCTAGAAGA+GGG | - | chr1.1:76489020-76489039 | MS.gene96686:intron | 50.0% |
| !! | TGGCATTGGCAGCATTTAGG+CGG | + | chr1.1:76489005-76489024 | None:intergenic | 50.0% |
| !! | TTTAGCCTGGTGCTACCACA+AGG | - | chr1.1:76492125-76492144 | MS.gene96686:CDS | 50.0% |
| ACAATGGGGTAACACCGTGG+CGG | + | chr1.1:76489834-76489853 | None:intergenic | 55.0% | |
| ACTAGTACAACGGGGTCCTG+GGG | - | chr1.1:76493043-76493062 | MS.gene96686:intron | 55.0% | |
| AGACTAGTACAACGGGGTCC+TGG | - | chr1.1:76493041-76493060 | MS.gene96686:intron | 55.0% | |
| AGGGTGATGTGGGGAACTAC+TGG | - | chr1.1:76492716-76492735 | MS.gene96686:intron | 55.0% | |
| CAGGGCATGCATGGCAACTA+TGG | - | chr1.1:76493004-76493023 | MS.gene96686:intron | 55.0% | |
| GACTAGTACAACGGGGTCCT+GGG | - | chr1.1:76493042-76493061 | MS.gene96686:intron | 55.0% | |
| GAGAACTTTCAGGCACCCCT+GGG | + | chr1.1:76490154-76490173 | None:intergenic | 55.0% | |
| GAGACTGGCACTATTTGGCG+GGG | - | chr1.1:76491001-76491020 | MS.gene96686:intron | 55.0% | |
| GATAGGATCCCACACAACCC+AGG | - | chr1.1:76490134-76490153 | MS.gene96686:intron | 55.0% | |
| GGTGCAGTCACTGGAAGAGT+AGG | + | chr1.1:76492454-76492473 | None:intergenic | 55.0% | |
| GGTGGTCTGCAAATGTCGCA+AGG | - | chr1.1:76488298-76488317 | MS.gene96686:CDS | 55.0% | |
| GTGCGATAGGTGTGGGAAAG+AGG | + | chr1.1:76491412-76491431 | None:intergenic | 55.0% | |
| GTGTTGCCCAATTTCCGCCA+CGG | - | chr1.1:76489817-76489836 | MS.gene96686:intron | 55.0% | |
| TAGGATCCCACACAACCCAG+GGG | - | chr1.1:76490136-76490155 | MS.gene96686:intron | 55.0% | |
| TATCCTGCTGGGGCAGTATG+TGG | + | chr1.1:76489253-76489272 | None:intergenic | 55.0% | |
| TGAGAACTTTCAGGCACCCC+TGG | + | chr1.1:76490155-76490174 | None:intergenic | 55.0% | |
| TGCCATGCATGCCCTGCAAA+TGG | + | chr1.1:76493000-76493019 | None:intergenic | 55.0% | |
| TTCCAGTGACTGCACCTGCA+AGG | - | chr1.1:76492458-76492477 | MS.gene96686:intron | 55.0% | |
| TTCCTTGCAGGTGCAGTCAC+TGG | + | chr1.1:76492463-76492482 | None:intergenic | 55.0% | |
| ! | ATAGGTGTTGCGGCCTATGG+AGG | + | chr1.1:76489871-76489890 | None:intergenic | 55.0% |
| ! | GGGGTGCCTGAAAGTTCTCA+AGG | - | chr1.1:76490155-76490174 | MS.gene96686:intron | 55.0% |
| ! | GGTAACACCGTGGCGGAAAT+TGG | + | chr1.1:76489827-76489846 | None:intergenic | 55.0% |
| ! | TCAGAAGTCTGGTGGTGTCC+AGG | - | chr1.1:76489775-76489794 | MS.gene96686:intron | 55.0% |
| ! | TCCACCCCCCTCTTCTAGAA+CGG | + | chr1.1:76489030-76489049 | None:intergenic | 55.0% |
| !! | ACCACGCAGATTTGGTGCTC+TGG | + | chr1.1:76488621-76488640 | None:intergenic | 55.0% |
| !! | CAAGCCGTTCTAGAAGAGGG+GGG | - | chr1.1:76489023-76489042 | MS.gene96686:intron | 55.0% |
| !! | CCAAGCCGTTCTAGAAGAGG+GGG | - | chr1.1:76489022-76489041 | MS.gene96686:intron | 55.0% |
| !! | CCACGCAGATTTGGTGCTCT+GGG | + | chr1.1:76488620-76488639 | None:intergenic | 55.0% |
| !! | CCTGGTGCTACCACAAGGAA+GGG | - | chr1.1:76492130-76492149 | MS.gene96686:CDS | 55.0% |
| !! | GCCAAGCCGTTCTAGAAGAG+GGG | - | chr1.1:76489021-76489040 | MS.gene96686:intron | 55.0% |
| !! | GGCAAAGCACTGGACCAGAA+AGG | + | chr1.1:76492433-76492452 | None:intergenic | 55.0% |
| CCCTTCCTTGTGGTAGCACC+AGG | + | chr1.1:76492133-76492152 | None:intergenic | 60.0% | |
| ! | CCCAGAGCACCAAATCTGCG+TGG | - | chr1.1:76488617-76488636 | MS.gene96686:intron | 60.0% |
| !! | CCCCCTCTTCTAGAACGGCT+TGG | + | chr1.1:76489025-76489044 | None:intergenic | 60.0% |
| !! | GCCTGGTGCTACCACAAGGA+AGG | - | chr1.1:76492129-76492148 | MS.gene96686:CDS | 60.0% |
| CAGGCACCCCTGGGTTGTGT+GGG | + | chr1.1:76490145-76490164 | None:intergenic | 65.0% | |
| CCTCCACATACTGCCCCAGC+AGG | - | chr1.1:76489247-76489266 | MS.gene96686:CDS | 65.0% | |
| CCTGCTGGGGCAGTATGTGG+AGG | + | chr1.1:76489250-76489269 | None:intergenic | 65.0% | |
| GTGTTGCGGCCTATGGAGGC+TGG | + | chr1.1:76489867-76489886 | None:intergenic | 65.0% | |
| TCAGGCACCCCTGGGTTGTG+TGG | + | chr1.1:76490146-76490165 | None:intergenic | 65.0% | |
| !! | GCCGTTCTAGAAGAGGGGGG+TGG | - | chr1.1:76489026-76489045 | MS.gene96686:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 76488296 | 76493106 | 76488296 | ID=MS.gene96686 |
| chr1.1 | mRNA | 76488296 | 76493106 | 76488296 | ID=MS.gene96686.t1;Parent=MS.gene96686 |
| chr1.1 | exon | 76493083 | 76493106 | 76493083 | ID=MS.gene96686.t1.exon1;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76493083 | 76493106 | 76493083 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76492764 | 76492844 | 76492764 | ID=MS.gene96686.t1.exon2;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76492764 | 76492844 | 76492764 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76492325 | 76492445 | 76492325 | ID=MS.gene96686.t1.exon3;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76492325 | 76492445 | 76492325 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76492105 | 76492199 | 76492105 | ID=MS.gene96686.t1.exon4;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76492105 | 76492199 | 76492105 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76490411 | 76490482 | 76490411 | ID=MS.gene96686.t1.exon5;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76490411 | 76490482 | 76490411 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76489438 | 76489668 | 76489438 | ID=MS.gene96686.t1.exon6;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76489438 | 76489668 | 76489438 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76489164 | 76489272 | 76489164 | ID=MS.gene96686.t1.exon7;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76489164 | 76489272 | 76489164 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76488821 | 76489007 | 76488821 | ID=MS.gene96686.t1.exon8;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76488821 | 76489007 | 76488821 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| chr1.1 | exon | 76488296 | 76488395 | 76488296 | ID=MS.gene96686.t1.exon9;Parent=MS.gene96686.t1 |
| chr1.1 | CDS | 76488296 | 76488395 | 76488296 | ID=cds.MS.gene96686.t1;Parent=MS.gene96686.t1 |
| Gene Sequence |
| Protein sequence |
