AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96759

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96759.t1 MTR_1g082550 94.652 374 18 2 1 373 1 373 0.0 688
MS.gene96759.t1 MTR_7g113800 63.897 349 105 9 32 373 27 361 1.91e-149 426
MS.gene96759.t1 MTR_3g099650 42.679 321 164 8 47 357 58 368 3.91e-70 224
MS.gene96759.t1 MTR_5g064990 38.788 330 186 6 43 368 59 376 3.84e-59 196
MS.gene96759.t1 MTR_5g064980 43.463 283 139 7 47 309 53 334 1.16e-58 195
MS.gene96759.t1 MTR_6g055030 36.071 280 170 4 1 280 6 276 3.05e-47 163
MS.gene96759.t1 MTR_3g086730 36.574 216 114 6 48 262 1 194 1.31e-36 133
MS.gene96759.t1 MTR_3g086700 33.790 219 114 4 48 266 1 188 1.21e-35 129
MS.gene96759.t1 MTR_6g055030 31.429 280 152 5 1 280 6 245 4.12e-31 119
MS.gene96759.t1 MTR_3g110190 42.308 130 67 3 44 168 8 134 9.08e-30 117
MS.gene96759.t1 MTR_5g076990 36.207 232 126 8 53 272 39 260 3.51e-29 115
MS.gene96759.t1 MTR_8g066740 37.083 240 121 9 48 272 35 259 1.14e-28 113
MS.gene96759.t1 MTR_2g055790 40.000 145 70 3 30 174 21 148 3.29e-28 109
MS.gene96759.t1 MTR_6g087150 31.776 214 122 7 10 212 8 208 2.62e-26 108
MS.gene96759.t1 MTR_4g106680 36.747 166 85 4 22 171 16 177 2.83e-26 107
MS.gene96759.t1 MTR_4g120270 47.423 97 45 2 95 190 78 169 1.83e-23 98.6
MS.gene96759.t1 MTR_2g436100 57.692 78 30 1 96 173 92 166 3.26e-23 98.6
MS.gene96759.t1 MTR_5g066250 39.695 131 73 3 46 174 82 208 4.52e-23 100
MS.gene96759.t1 MTR_5g064890 36.416 173 75 6 32 172 31 200 1.06e-22 98.2
MS.gene96759.t1 MTR_4g129420 41.176 136 72 2 43 172 57 190 1.50e-22 99.4
MS.gene96759.t1 MTR_3g100400 50.000 82 38 1 93 174 126 204 2.02e-22 98.2
MS.gene96759.t1 MTR_1g100737 43.158 95 50 2 81 171 74 168 3.44e-22 93.2
MS.gene96759.t1 MTR_5g034790 36.184 152 74 4 42 174 43 190 3.09e-21 94.4
MS.gene96759.t1 MTR_1g043410 33.333 147 82 3 34 168 23 165 2.02e-20 91.3
MS.gene96759.t1 MTR_2g090950 38.614 101 59 1 94 191 88 188 2.29e-20 89.4
MS.gene96759.t1 MTR_7g116220 32.867 143 86 2 42 174 5 147 4.07e-20 87.0
MS.gene96759.t1 MTR_8g009190 31.646 158 102 2 44 196 19 175 4.87e-20 90.1
MS.gene96759.t1 MTR_8g093010 34.722 144 83 5 32 172 45 180 7.44e-20 87.4
MS.gene96759.t1 MTR_1g074190 48.101 79 38 1 96 171 98 176 8.12e-20 89.7
MS.gene96759.t1 MTR_3g464780 46.988 83 43 1 91 172 96 178 1.07e-19 87.8
MS.gene96759.t1 MTR_3g094000 32.919 161 87 5 30 175 14 168 1.12e-19 85.9
MS.gene96759.t1 MTR_6g007737 34.266 143 76 4 43 171 66 204 1.50e-19 89.4
MS.gene96759.t1 MTR_5g030010 33.333 141 77 3 45 171 56 193 2.12e-19 89.0
MS.gene96759.t1 MTR_7g117540 35.099 151 79 3 30 171 6 146 3.24e-19 87.0
MS.gene96759.t1 MTR_2g009310 52.439 82 30 2 97 175 135 210 3.71e-19 88.6
MS.gene96759.t1 MTR_8g066780 32.168 143 88 4 45 180 56 196 1.67e-18 86.3
MS.gene96759.t1 MTR_8g089880 48.148 81 39 2 97 177 127 204 1.74e-18 84.7
MS.gene96759.t1 MTR_1g090480 30.282 142 92 3 34 173 13 149 1.82e-18 82.4
MS.gene96759.t1 MTR_1g056350 39.241 79 48 0 97 175 74 152 2.40e-18 82.0
MS.gene96759.t1 MTR_4g093830 43.878 98 52 2 97 194 126 220 3.40e-18 85.5
MS.gene96759.t1 MTR_8g092840 32.653 147 88 5 33 172 44 186 4.13e-18 82.8
MS.gene96759.t1 MTR_2g090905 41.250 80 44 1 98 174 40 119 4.85e-18 80.1
MS.gene96759.t1 MTR_4g056590 44.156 77 37 1 96 172 99 169 5.27e-18 81.6
MS.gene96759.t1 MTR_8g092960 30.323 155 105 2 19 172 24 176 6.75e-18 82.0
MS.gene96759.t1 MTR_8g063660 48.684 76 34 2 97 171 68 139 1.19e-17 83.6
MS.gene96759.t1 MTR_8g073120 34.043 141 68 5 38 169 17 141 1.58e-17 80.5
MS.gene96759.t1 MTR_7g073200 34.839 155 83 7 35 182 19 162 1.65e-17 80.1
MS.gene96759.t1 MTR_5g024730 32.031 128 66 4 48 168 34 147 1.96e-17 80.5
MS.gene96759.t1 MTR_5g026720 31.447 159 88 6 31 180 1 147 2.25e-17 79.0
MS.gene96759.t1 MTR_1g070140 31.159 138 81 5 46 171 40 175 2.87e-17 82.4
MS.gene96759.t1 MTR_5g026730 32.192 146 85 4 38 175 4 143 2.91e-17 79.3
MS.gene96759.t1 MTR_2g044570 45.833 72 39 0 106 177 63 134 3.12e-17 81.6
MS.gene96759.t1 MTR_8g092930 31.034 145 94 3 32 172 43 185 5.99e-17 79.3
MS.gene96759.t1 MTR_3g091620 46.053 76 38 1 97 172 101 173 6.15e-17 81.6
MS.gene96759.t1 MTR_7g116180 44.872 78 43 0 94 171 64 141 6.80e-17 78.2
MS.gene96759.t1 MTR_1g070425 44.872 78 43 0 94 171 65 142 1.02e-16 77.8
MS.gene96759.t1 MTR_8g023400 47.368 76 35 2 97 172 92 162 1.23e-16 80.5
MS.gene96759.t1 MTR_3g095560 31.973 147 86 6 48 190 63 199 1.85e-16 78.6
MS.gene96759.t1 MTR_1g492830 32.278 158 88 6 47 187 3 158 2.16e-16 77.8
MS.gene96759.t1 MTR_3g071300 27.344 128 92 1 50 176 29 156 2.26e-16 76.6
MS.gene96759.t1 MTR_6g007680 31.496 127 76 3 53 179 4 119 2.44e-16 75.9
MS.gene96759.t1 MTR_5g092790 40.541 74 43 1 95 168 155 227 3.42e-16 77.4
MS.gene96759.t1 MTR_4g063070 35.052 97 52 2 76 172 297 382 4.01e-16 79.7
MS.gene96759.t1 MTR_7g079280 39.024 82 49 1 94 175 77 157 4.61e-16 75.9
MS.gene96759.t1 MTR_8g092985 29.371 143 97 2 32 172 44 184 5.04e-16 76.6
MS.gene96759.t1 MTR_5g082940 33.913 115 65 3 58 171 44 148 6.15e-16 75.5
MS.gene96759.t1 MTR_3g012550 31.387 137 83 5 47 175 24 157 6.68e-16 75.5
MS.gene96759.t1 MTR_5g071930 41.860 86 41 2 96 181 65 141 7.00e-16 75.9
MS.gene96759.t1 MTR_8g071815 40.217 92 54 1 123 214 87 177 1.05e-15 75.1
MS.gene96759.t1 MTR_7g096690 29.560 159 92 6 48 191 13 166 1.55e-15 77.0
MS.gene96759.t1 MTR_8g092970 32.414 145 84 5 32 172 43 177 1.94e-15 75.1
MS.gene96759.t1 MTR_5g092750 37.975 79 48 1 94 172 154 231 2.33e-15 75.1
MS.gene96759.t1 MTR_8g032690 39.130 92 54 2 126 217 19 108 2.46e-15 71.6
MS.gene96759.t1 MTR_7g079290 36.145 83 52 1 92 173 120 202 3.17e-15 74.3
MS.gene96759.t1 MTR_7g076250 32.540 126 80 3 97 220 63 185 3.19e-15 73.9
MS.gene96759.t1 MTR_3g078450 44.156 77 42 1 95 171 74 149 4.54e-15 73.9
MS.gene96759.t1 MTR_1g090460 40.789 76 44 1 105 179 73 148 4.69e-15 72.4
MS.gene96759.t1 MTR_7g108855 40.789 76 44 1 98 173 67 141 5.40e-15 73.2
MS.gene96759.t1 MTR_2g096350 38.889 72 43 1 98 169 108 178 1.42e-14 72.8
MS.gene96759.t1 MTR_8g028465 40.506 79 42 2 97 175 90 163 1.68e-14 72.0
MS.gene96759.t1 MTR_2g041200 33.600 125 80 2 51 173 33 156 1.70e-14 71.6
MS.gene96759.t1 MTR_8g019710 34.483 116 64 4 94 207 27 132 1.71e-14 70.5
MS.gene96759.t1 MTR_3g078470 44.156 77 42 1 95 171 74 149 1.79e-14 72.4
MS.gene96759.t1 MTR_4g030070 33.019 106 67 1 97 202 85 186 2.07e-14 72.4
MS.gene96759.t1 MTR_3g081030 45.070 71 39 0 126 196 119 189 2.09e-14 72.0
MS.gene96759.t1 MTR_3g086680 47.887 71 26 3 107 169 22 89 2.10e-14 69.3
MS.gene96759.t1 MTR_3g116000 31.915 141 82 4 48 183 30 161 2.31e-14 71.2
MS.gene96759.t1 MTR_2g035800 30.882 136 86 4 47 182 29 156 5.36e-14 69.7
MS.gene96759.t1 MTR_7g116200 36.957 92 52 2 79 169 50 136 6.37e-14 69.7
MS.gene96759.t1 MTR_3g114500 50.000 64 28 2 115 174 56 119 1.04e-13 67.8
MS.gene96759.t1 MTR_5g022920 38.462 78 47 1 94 171 158 234 1.37e-13 70.1
MS.gene96759.t1 MTR_8g092990 43.478 69 33 2 106 172 123 187 2.82e-13 68.9
MS.gene96759.t1 MTR_8g099515 42.667 75 40 2 95 168 307 379 3.84e-13 70.5
MS.gene96759.t1 MTR_4g022410 33.065 124 73 3 48 171 45 158 6.68e-13 67.0
MS.gene96759.t1 MTR_8g027745 54.000 50 23 0 126 175 314 363 7.62e-13 69.3
MS.gene96759.t1 MTR_7g117350 38.947 95 53 3 93 184 286 378 8.55e-13 69.3
MS.gene96759.t1 MTR_1g026070 53.061 49 23 0 125 173 70 118 9.36e-13 65.1
MS.gene96759.t1 MTR_7g117350 38.947 95 53 3 93 184 278 370 9.53e-13 69.3
MS.gene96759.t1 MTR_5g009200 43.590 78 31 2 97 168 322 392 1.28e-12 68.9
MS.gene96759.t1 MTR_7g116210 40.506 79 41 2 92 169 5 78 1.37e-12 64.3
MS.gene96759.t1 MTR_6g007670 33.333 93 55 3 87 179 1 86 2.86e-12 66.6
MS.gene96759.t1 MTR_8g072020 38.356 73 41 3 101 172 422 491 3.35e-12 68.2
MS.gene96759.t1 MTR_8g072020 38.356 73 41 3 101 172 383 452 3.50e-12 67.8
MS.gene96759.t1 MTR_5g009210 43.590 78 31 2 97 168 287 357 4.12e-12 67.4
MS.gene96759.t1 MTR_2g079320 37.313 67 40 1 107 171 138 204 4.75e-12 65.1
MS.gene96759.t1 MTR_3g091200 38.356 73 44 1 97 169 303 374 6.36e-12 66.6
MS.gene96759.t1 MTR_5g009190 42.308 78 32 2 97 168 266 336 1.04e-11 65.9
MS.gene96759.t1 MTR_4g094725 29.752 121 78 2 48 168 35 148 1.09e-11 62.8
MS.gene96759.t1 MTR_4g108830 47.826 46 24 0 126 171 146 191 1.13e-11 63.5
MS.gene96759.t1 MTR_8g098770 40.299 67 39 1 113 178 73 139 1.20e-11 62.8
MS.gene96759.t1 MTR_3g087900 50.000 50 23 2 125 173 68 116 1.23e-11 62.8
MS.gene96759.t1 MTR_8g027980 39.437 71 39 2 103 171 96 164 1.30e-11 64.7
MS.gene96759.t1 MTR_4g108830 47.826 46 24 0 126 171 174 219 1.35e-11 63.9
MS.gene96759.t1 MTR_4g077570 45.283 53 25 2 124 173 9 60 1.46e-11 60.5
MS.gene96759.t1 MTR_7g059360 36.842 76 47 1 103 178 136 210 1.61e-11 63.9
MS.gene96759.t1 MTR_8g074900 51.111 45 22 0 124 168 178 222 2.54e-11 63.2
MS.gene96759.t1 MTR_8g099495 38.158 76 38 2 97 168 319 389 2.71e-11 65.1
MS.gene96759.t1 MTR_3g078120 34.783 92 52 2 77 168 44 127 2.72e-11 61.6
MS.gene96759.t1 MTR_5g010100 46.000 50 26 1 126 174 81 130 3.23e-11 60.8
MS.gene96759.t1 MTR_1g090450 31.200 125 77 4 51 168 27 149 5.04e-11 60.8
MS.gene96759.t1 MTR_3g078540 37.349 83 48 2 89 169 42 122 5.67e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96759.t1 AT3G05200 48.851 348 145 11 16 358 15 334 1.80e-90 278
MS.gene96759.t1 AT1G72200 41.643 353 175 12 24 366 37 368 2.68e-75 239
MS.gene96759.t1 AT5G27420 44.225 355 123 12 39 358 36 350 6.33e-75 236
MS.gene96759.t1 AT1G22500 39.474 342 188 8 37 372 28 356 1.46e-66 215
MS.gene96759.t1 AT1G35330 39.172 314 168 9 11 314 9 309 2.42e-53 179
MS.gene96759.t1 AT4G40070 37.931 319 148 13 45 354 43 320 2.66e-53 179
MS.gene96759.t1 AT4G09120 42.667 300 133 13 51 345 51 316 2.80e-53 180
MS.gene96759.t1 AT4G09130 38.871 319 161 9 11 318 12 307 2.30e-51 175
MS.gene96759.t1 AT2G35000 42.449 245 116 8 48 277 51 285 1.79e-50 173
MS.gene96759.t1 AT2G34990 42.041 245 105 8 43 276 9 227 6.33e-49 167
MS.gene96759.t1 AT2G34990 42.041 245 105 8 43 276 31 249 6.96e-49 168
MS.gene96759.t1 AT4G09110 36.364 253 89 6 93 345 90 270 4.68e-40 144
MS.gene96759.t1 AT4G17920 31.818 286 166 8 44 315 19 289 3.31e-37 136
MS.gene96759.t1 AT5G46650 33.205 259 141 7 33 276 8 249 5.58e-36 133
MS.gene96759.t1 AT4G09100 56.098 82 36 0 92 173 51 132 2.33e-27 105
MS.gene96759.t1 AT2G27940 36.364 143 71 3 44 170 46 184 2.66e-27 108
MS.gene96759.t1 AT2G20030 41.096 146 71 5 46 181 39 179 1.81e-25 106
MS.gene96759.t1 AT5G05810 35.570 149 80 2 39 174 49 194 1.36e-24 104
MS.gene96759.t1 AT3G16720 35.632 174 88 4 25 184 9 172 8.13e-24 100
MS.gene96759.t1 AT4G28890 33.333 180 99 5 17 179 1 176 6.14e-23 99.8
MS.gene96759.t1 AT2G35420 33.772 228 98 10 45 256 18 208 1.84e-22 95.5
MS.gene96759.t1 AT1G23980 35.616 146 75 3 42 171 47 189 2.53e-22 97.4
MS.gene96759.t1 AT2G18650 40.708 113 65 1 60 172 62 172 4.28e-22 97.4
MS.gene96759.t1 AT5G40250 27.244 312 170 10 42 322 39 324 4.48e-22 96.7
MS.gene96759.t1 AT5G17600 36.641 131 65 4 51 169 61 185 1.31e-21 95.1
MS.gene96759.t1 AT1G04360 33.333 144 72 3 46 171 42 179 9.94e-21 92.8
MS.gene96759.t1 AT4G17905 31.548 168 85 5 44 188 58 218 1.23e-20 91.7
MS.gene96759.t1 AT4G17905 31.548 168 85 5 44 188 84 244 2.13e-20 91.3
MS.gene96759.t1 AT1G72220 39.855 138 61 6 51 172 92 223 2.66e-20 92.0
MS.gene96759.t1 AT3G62690 33.880 183 100 6 33 206 14 184 2.83e-20 89.7
MS.gene96759.t1 AT4G15975 33.533 167 90 6 97 259 51 200 3.69e-20 89.0
MS.gene96759.t1 AT5G43420 29.902 204 115 5 46 223 35 236 7.38e-20 90.5
MS.gene96759.t1 AT1G32361 36.145 166 84 7 97 255 130 280 1.44e-19 89.0
MS.gene96759.t1 AT4G30400 52.778 72 32 1 97 168 107 176 2.39e-19 89.7
MS.gene96759.t1 AT3G18930 49.425 87 37 2 97 176 120 206 3.92e-19 88.6
MS.gene96759.t1 AT3G18930 49.425 87 37 2 97 176 120 206 3.92e-19 88.6
MS.gene96759.t1 AT3G18930 49.425 87 37 2 97 176 120 206 3.92e-19 88.6
MS.gene96759.t1 AT4G33565 53.947 76 32 2 97 172 191 263 4.50e-19 88.2
MS.gene96759.t1 AT2G42360 33.871 124 74 2 52 175 42 157 4.85e-19 85.9
MS.gene96759.t1 AT5G05280 32.192 146 75 5 36 172 29 159 7.76e-19 83.6
MS.gene96759.t1 AT3G48030 49.333 75 36 1 97 171 102 174 9.56e-19 85.5
MS.gene96759.t1 AT3G48030 49.333 75 36 1 97 171 180 252 1.10e-18 86.7
MS.gene96759.t1 AT4G10150 34.228 149 83 5 36 175 18 160 1.17e-18 84.7
MS.gene96759.t1 AT4G10160 30.247 162 90 4 52 210 25 166 2.01e-18 83.6
MS.gene96759.t1 AT3G10910 34.161 161 84 6 26 172 8 160 2.93e-18 82.0
MS.gene96759.t1 AT3G03550 31.788 151 76 3 46 172 58 205 3.31e-18 85.5
MS.gene96759.t1 AT5G10380 44.340 106 44 5 97 197 109 204 5.55e-18 84.0
MS.gene96759.t1 AT5G01880 43.137 102 48 4 71 172 60 151 7.26e-18 80.5
MS.gene96759.t1 AT3G18773 27.941 204 123 7 21 220 27 210 8.27e-18 82.0
MS.gene96759.t1 AT1G49200 33.577 137 84 5 39 172 50 182 8.31e-18 82.0
MS.gene96759.t1 AT2G42350 48.718 78 36 2 96 173 74 147 8.96e-18 81.6
MS.gene96759.t1 AT5G57750 32.374 139 78 4 44 170 32 166 1.13e-17 81.3
MS.gene96759.t1 AT2G46493 37.097 124 75 2 47 168 58 180 1.68e-17 80.1
MS.gene96759.t1 AT1G49230 30.556 180 107 7 42 220 50 212 2.77e-17 80.5
MS.gene96759.t1 AT3G60220 47.222 72 38 0 100 171 91 162 6.60e-17 81.3
MS.gene96759.t1 AT2G47560 34.000 150 93 4 26 173 10 155 6.97e-17 79.3
MS.gene96759.t1 AT1G76410 36.220 127 75 4 48 172 28 150 7.34e-17 78.2
MS.gene96759.t1 AT1G49220 30.000 190 115 7 39 225 49 223 8.35e-17 79.7
MS.gene96759.t1 AT5G07040 31.008 129 84 3 47 174 18 142 2.40e-16 76.3
MS.gene96759.t1 AT1G49210 34.127 126 65 3 96 220 107 215 3.12e-16 77.4
MS.gene96759.t1 AT2G25410 38.542 96 57 2 80 173 279 374 3.14e-16 79.7
MS.gene96759.t1 AT2G34000 36.441 118 68 3 53 168 21 133 4.14e-16 75.5
MS.gene96759.t1 AT1G53820 37.647 85 48 2 97 181 95 174 1.62e-15 77.0
MS.gene96759.t1 AT1G20823 31.973 147 79 6 38 172 20 157 2.57e-15 74.3
MS.gene96759.t1 AT5G53110 39.167 120 62 5 57 168 256 372 2.79e-15 77.0
MS.gene96759.t1 AT1G72310 42.500 80 42 1 97 172 94 173 3.48e-15 76.3
MS.gene96759.t1 AT3G14320 44.444 72 36 1 97 168 63 130 3.49e-15 73.9
MS.gene96759.t1 AT2G17450 32.061 131 75 4 48 173 28 149 3.93e-15 73.6
MS.gene96759.t1 AT1G28040 44.444 72 39 1 97 168 225 295 4.16e-15 75.5
MS.gene96759.t1 AT2G46494 43.038 79 44 1 90 168 281 358 4.27e-15 76.3
MS.gene96759.t1 AT5G06490 35.714 84 50 1 97 176 96 179 5.82e-15 73.2
MS.gene96759.t1 AT2G46160 41.667 84 44 1 97 175 104 187 6.48e-15 73.6
MS.gene96759.t1 AT2G46160 41.667 84 44 1 97 175 104 187 6.48e-15 73.6
MS.gene96759.t1 AT3G61550 36.458 96 51 2 97 183 99 193 6.96e-15 73.6
MS.gene96759.t1 AT2G35910 41.772 79 43 1 97 175 121 196 1.09e-14 72.8
MS.gene96759.t1 AT2G46495 33.099 142 89 4 38 176 230 368 1.14e-14 75.1
MS.gene96759.t1 AT5G58580 30.709 127 86 1 88 214 102 226 2.86e-14 73.2
MS.gene96759.t1 AT2G46495 38.144 97 57 2 81 176 246 340 2.97e-14 73.6
MS.gene96759.t1 AT5G42200 57.143 49 21 0 125 173 103 151 3.66e-14 70.1
MS.gene96759.t1 AT4G35480 51.852 54 26 0 120 173 107 160 4.74e-14 70.9
MS.gene96759.t1 AT1G33480 39.474 76 44 1 125 198 99 174 5.13e-14 72.0
MS.gene96759.t1 AT3G11110 25.899 139 100 2 33 171 17 152 2.28e-13 67.8
MS.gene96759.t1 AT5G47610 37.975 79 47 1 100 178 83 159 2.31e-13 68.2
MS.gene96759.t1 AT1G74410 36.486 74 44 1 95 168 148 218 1.09e-12 67.4
MS.gene96759.t1 AT4G35840 37.647 85 39 2 94 171 159 236 1.11e-12 67.4
MS.gene96759.t1 AT5G66070 44.828 58 32 0 114 171 164 221 1.20e-12 67.0
MS.gene96759.t1 AT5G66070 44.828 58 32 0 114 171 164 221 1.20e-12 67.0
MS.gene96759.t1 AT3G19140 37.662 77 44 1 95 171 52 124 1.83e-12 64.7
MS.gene96759.t1 AT5G66070 44.828 58 32 0 114 171 188 245 1.84e-12 67.0
MS.gene96759.t1 AT3G60966 50.943 53 26 0 126 178 62 114 2.22e-12 64.3
MS.gene96759.t1 AT4G17245 33.607 122 76 4 57 177 37 154 6.14e-12 63.9
MS.gene96759.t1 AT2G18670 32.967 91 54 2 92 177 78 166 7.64e-12 63.9
MS.gene96759.t1 AT3G20395 40.789 76 40 3 96 171 146 216 8.77e-12 64.7
MS.gene96759.t1 AT2G17730 33.333 78 52 0 94 171 164 241 1.11e-11 64.7
MS.gene96759.t1 AT1G35625 31.343 134 76 7 48 179 165 284 1.42e-11 65.5
MS.gene96759.t1 AT4G24015 54.348 46 21 0 126 171 105 150 1.60e-11 62.8
MS.gene96759.t1 AT5G36001 53.488 43 20 0 126 168 264 306 1.73e-11 65.1
MS.gene96759.t1 AT3G30460 34.343 99 59 4 79 176 90 183 2.82e-11 62.4
MS.gene96759.t1 AT2G44578 48.000 50 26 0 126 175 70 119 2.85e-11 61.6
MS.gene96759.t1 AT3G30460 34.343 99 59 4 79 176 54 147 3.06e-11 61.6
MS.gene96759.t1 AT1G53010 48.936 47 24 0 125 171 129 175 3.47e-11 62.0
MS.gene96759.t1 AT5G41400 36.232 69 42 1 106 172 85 153 4.14e-11 61.6
MS.gene96759.t1 AT1G26800 41.176 68 38 2 112 179 99 164 4.97e-11 62.0
MS.gene96759.t1 AT4G30370 36.111 72 43 1 97 168 89 157 5.85e-11 61.2

Find 113 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGGTTTGCAGAGCTAATT+TGG 0.212949 1.1:+61094724 MS.gene96759:CDS
CTTCTAGCTCTATGTAATTC+CGG 0.266296 1.1:-61095073 None:intergenic
AGCTAATTTGGTTCCTCAAC+CGG 0.306735 1.1:+61094736 MS.gene96759:CDS
CGGTCATTCGGTGGTTCAAC+CGG 0.317157 1.1:+61094982 MS.gene96759:CDS
GTGAACCTCTTGTACGGTTC+CGG 0.356534 1.1:-61094919 None:intergenic
TACGGTTCCGGTTCAGCGTC+TGG 0.359258 1.1:-61094907 None:intergenic
TTCTAGCTCTATGTAATTCC+GGG 0.363125 1.1:-61095072 None:intergenic
GTCTGTAAGGCGGTTGGACC+GGG 0.367584 1.1:+61095174 MS.gene96759:CDS
AGTCTGTAAGGCGGTTGGAC+CGG 0.371626 1.1:+61095173 MS.gene96759:CDS
TGGCTTACAGTCAACACTTC+TGG 0.379879 1.1:-61094887 None:intergenic
AGCTTCAATATCTTGTGGTT+CGG 0.385992 1.1:-61094792 None:intergenic
CCAAGGGTGGCTAGTAGCTC+TGG 0.421442 1.1:+61095268 MS.gene96759:CDS
CACAGTCTGGTAGGCTTCGT+TGG 0.428411 1.1:+61094939 MS.gene96759:CDS
GACAATTAAACCGGTGGCCG+CGG 0.428720 1.1:-61095337 None:intergenic
GTCTCACTCGACCGGTCATT+CGG 0.429376 1.1:+61094970 MS.gene96759:CDS
TTCTCCGGCGTCCCCTTCGC+CGG 0.431079 1.1:+61094296 MS.gene96759:CDS
CTGTAAGCCAGACGCTGAAC+CGG 0.432316 1.1:+61094900 MS.gene96759:CDS
GTTGGATTGTGCTCCGGCGA+AGG 0.435306 1.1:-61094309 None:intergenic
GCTGTGAAGATTCATAAAAT+CGG 0.437561 1.1:+61094569 MS.gene96759:CDS
TTGGATTGTGCTCCGGCGAA+GGG 0.440848 1.1:-61094308 None:intergenic
CGGTTCTCATACCACTTGTC+CGG 0.441794 1.1:+61094706 MS.gene96759:CDS
CGTACAAGAGGTTCACAGTC+TGG 0.444556 1.1:+61094926 MS.gene96759:CDS
GGTTCCTCAACCGGGTGAAT+CGG 0.448219 1.1:+61094745 MS.gene96759:CDS
ACCCTGAGTGTATTGATGAA+TGG 0.454351 1.1:+61094681 MS.gene96759:CDS
ACACTGAACGGTTCACTTTG+AGG 0.456031 1.1:+61095011 MS.gene96759:CDS
TGTTGACTCCCCGCGGCCAC+CGG 0.459445 1.1:+61095327 MS.gene96759:CDS
ATTTGTTTCCTCACTTCAAC+CGG 0.460725 1.1:-61095037 None:intergenic
ACAATTAAACCGGTGGCCGC+GGG 0.470750 1.1:-61095336 None:intergenic
TCATCGACGACGCTCTTACA+AGG 0.474117 1.1:-61095240 None:intergenic
GTAGTAGAGGGAAGTCTGTA+AGG 0.476128 1.1:+61095161 MS.gene96759:CDS
ACCAAATTAGCTCTGCAAAC+CGG 0.481146 1.1:-61094725 None:intergenic
AAGATTCATAAAATCGGAAA+AGG 0.498603 1.1:+61094575 MS.gene96759:CDS
TGCTTCAGCAGCTACGGCGG+CGG 0.499866 1.1:+61095303 MS.gene96759:CDS
TGCCATGTTGCGTATGCTGT+TGG 0.500893 1.1:-61094462 None:intergenic
ACGGTTCACTTTGAGGCTAC+CGG 0.501722 1.1:+61095018 MS.gene96759:CDS
AGGGGTTATCGAACCGGTGG+TGG 0.502322 1.1:+61095130 MS.gene96759:CDS
GCTAATTTGGTTCCTCAACC+GGG 0.505025 1.1:+61094737 MS.gene96759:CDS
GTGGTTCGGTATTAATCGAC+GGG 0.509943 1.1:-61094778 None:intergenic
TCAAAACGAAGCTGTTGAAT+CGG 0.511719 1.1:+61094814 MS.gene96759:CDS
ACTACTTCCTTCACCACCAC+CGG 0.514270 1.1:-61095143 None:intergenic
TCACGGAGGGGTTATCGAAC+CGG 0.519162 1.1:+61095124 MS.gene96759:CDS
CAGCCGAGTATTCAAAGATC+GGG 0.522249 1.1:-61094550 None:intergenic
GTTCCCGATCTTTGAATACT+CGG 0.523553 1.1:+61094547 MS.gene96759:CDS
TATCGAACCGGTGGTGGTGA+AGG 0.528546 1.1:+61095136 MS.gene96759:CDS
CGGTTGAACCACCGAATGAC+CGG 0.529306 1.1:-61094981 None:intergenic
GCTGAAACAGACAATTAAAC+CGG 0.531764 1.1:-61095346 None:intergenic
CAACCGGGTGAATCGGTTCA+CGG 0.534267 1.1:+61094752 MS.gene96759:CDS
ACCGGGGTTTATTATCAGAC+CGG 0.534594 1.1:+61095191 MS.gene96759:CDS
CTCCGTGAACTAGTTTCTCT+CGG 0.538814 1.1:-61095109 None:intergenic
AGCGCGTGGTCTTGACGCAT+CGG 0.542829 1.1:+61094514 MS.gene96759:CDS
GTCAACACTTCTGGTTCAGT+TGG 0.543615 1.1:-61094878 None:intergenic
GGTGGTGAAGGAAGTAGTAG+AGG 0.547027 1.1:+61095148 MS.gene96759:CDS
TGCTCCGGCGAAGGGGACGC+CGG 0.550536 1.1:-61094300 None:intergenic
ACGATTATTATAGCCATGGA+AGG 0.551241 1.1:-61094368 None:intergenic
ACAGCCGAGTATTCAAAGAT+CGG 0.554297 1.1:-61094551 None:intergenic
TACATCTGCTTCAGCAGCTA+CGG 0.555290 1.1:+61095297 MS.gene96759:CDS
AACATGGCAGGAGGTTTAGC+TGG 0.555970 1.1:+61094476 MS.gene96759:CDS
CCAGAGCTACTAGCCACCCT+TGG 0.560296 1.1:-61095268 None:intergenic
GTGGTGAAGGAAGTAGTAGA+GGG 0.560832 1.1:+61095149 MS.gene96759:CDS
AGGGAAGTCTGTAAGGCGGT+TGG 0.563226 1.1:+61095168 MS.gene96759:CDS
GGTCATTCGGTGGTTCAACC+GGG 0.563296 1.1:+61094983 MS.gene96759:CDS
CGATTATTATAGCCATGGAA+GGG 0.570321 1.1:-61094367 None:intergenic
TAAAATCGGAAAAGGCGCGT+TGG 0.576420 1.1:+61094583 MS.gene96759:CDS
AATTACGATTATTATAGCCA+TGG 0.576610 1.1:-61094372 None:intergenic
CAACCGTGTAAGCCCTTCCA+TGG 0.576724 1.1:+61094355 MS.gene96759:CDS
AACCGTTCAGTGTTCTCACC+CGG 0.577046 1.1:-61095001 None:intergenic
CAAGAGGTTCACAGTCTGGT+AGG 0.578814 1.1:+61094930 MS.gene96759:CDS
TGCCGAGAGAAACTAGTTCA+CGG 0.579406 1.1:+61095107 MS.gene96759:CDS
CGTTCACGACGCGCAGCGCG+TGG 0.581144 1.1:+61094500 MS.gene96759:CDS
TGGATTGTGCTCCGGCGAAG+GGG 0.581939 1.1:-61094307 None:intergenic
TGAACCGATTCACCCGGTTG+AGG 0.582525 1.1:-61094749 None:intergenic
ATTACATAGAGCTAGAAGCT+TGG 0.585444 1.1:+61095078 MS.gene96759:CDS
TTGTAAGAGCGTCGTCGATG+AGG 0.587789 1.1:+61095242 MS.gene96759:CDS
TGTGGTTCGGTATTAATCGA+CGG 0.592922 1.1:-61094779 None:intergenic
TAGCCATGGAAGGGCTTACA+CGG 0.600576 1.1:-61094358 None:intergenic
GGGGTTTATTATCAGACCGG+TGG 0.601732 1.1:+61095194 MS.gene96759:CDS
CAGACTGTGAACCTCTTGTA+CGG 0.601926 1.1:-61094925 None:intergenic
AACAGCATACGCAACATGGC+AGG 0.603528 1.1:+61094464 MS.gene96759:CDS
TTCCAACAGCATACGCAACA+TGG 0.603661 1.1:+61094460 MS.gene96759:CDS
AGCTCTGCAAACCGGACAAG+TGG 0.605322 1.1:-61094717 None:intergenic
GAGAGAAACTAGTTCACGGA+GGG 0.607219 1.1:+61095111 MS.gene96759:CDS
ACAAATACTACTACAGAACC+CGG 0.610210 1.1:+61095054 MS.gene96759:CDS
TCAATCTACATCCGTCGATG+CGG 0.611966 1.1:+61094428 MS.gene96759:CDS
GTCGATGAGGTCACCAAGGG+TGG 0.612726 1.1:+61095255 MS.gene96759:CDS
TGAGGCTACCGGTTGAAGTG+AGG 0.617089 1.1:+61095029 MS.gene96759:CDS
AGCCATTCATCAATACACTC+AGG 0.617765 1.1:-61094683 None:intergenic
GGGTTTATTATCAGACCGGT+GGG 0.618718 1.1:+61095195 MS.gene96759:CDS
CTGAACCGGAACCGTACAAG+AGG 0.626899 1.1:+61094914 MS.gene96759:CDS
TCTGTAAGGCGGTTGGACCG+GGG 0.627057 1.1:+61095175 MS.gene96759:CDS
GTGGCTAGTAGCTCTGGTGA+AGG 0.628823 1.1:+61095274 MS.gene96759:CDS
GACGACGCTCTTACAAGGAA+AGG 0.631736 1.1:-61095235 None:intergenic
CAATTAAACCGGTGGCCGCG+GGG 0.633322 1.1:-61095335 None:intergenic
GAGTGTATTGATGAATGGCT+CGG 0.639572 1.1:+61094686 MS.gene96759:CDS
GTCGTCGATGAGGTCACCAA+GGG 0.640752 1.1:+61095252 MS.gene96759:CDS
ATCTGCTTCAGCAGCTACGG+CGG 0.641205 1.1:+61095300 MS.gene96759:CDS
AAGGTGAATCGCCGCATCGA+CGG 0.646247 1.1:-61094439 None:intergenic
GACGCTCTTACAAGGAAAGG+TGG 0.654435 1.1:-61095232 None:intergenic
ATGTTGCGTATGCTGTTGGA+AGG 0.655101 1.1:-61094458 None:intergenic
CGTCGTCGATGAGGTCACCA+AGG 0.655380 1.1:+61095251 MS.gene96759:CDS
GCCATTCATCAATACACTCA+GGG 0.657590 1.1:-61094682 None:intergenic
ATACCGTGAACCGATTCACC+CGG 0.658513 1.1:-61094755 None:intergenic
TCACTCGACCGGTCATTCGG+TGG 0.659670 1.1:+61094973 MS.gene96759:CDS
AGCATACGCAACATGGCAGG+AGG 0.660418 1.1:+61094467 MS.gene96759:CDS
CGGAGGGGTTATCGAACCGG+TGG 0.660988 1.1:+61095127 MS.gene96759:CDS
CATGAACATCAAAACACGGA+CGG 0.663861 1.1:+61094839 MS.gene96759:CDS
AACCGGGTGAGAACACTGAA+CGG 0.665353 1.1:+61094999 MS.gene96759:CDS
GAAACAGACAATTAAACCGG+TGG 0.672321 1.1:-61095343 None:intergenic
AGAGAAACTAGTTCACGGAG+GGG 0.692307 1.1:+61095112 MS.gene96759:CDS
ACCGGTCTGATAATAAACCC+CGG 0.693889 1.1:-61095192 None:intergenic
GTAGAGGGAAGTCTGTAAGG+CGG 0.711054 1.1:+61095164 MS.gene96759:CDS
GGTTCATGAACATCAAAACA+CGG 0.726047 1.1:+61094835 MS.gene96759:CDS
CGAGAGAAACTAGTTCACGG+AGG 0.730676 1.1:+61095110 MS.gene96759:CDS
CGGCGGTTGTTGACTCCCCG+CGG 0.731222 1.1:+61095320 MS.gene96759:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGATTCATAAAATCGGAAA+AGG + chr1.1:61094575-61094594 MS.gene96759:CDS 25.0%
! AATTACGATTATTATAGCCA+TGG - chr1.1:61094375-61094394 None:intergenic 25.0%
AGAACAAGAAAAAACACACA+AGG - chr1.1:61094268-61094287 None:intergenic 30.0%
GCTGTGAAGATTCATAAAAT+CGG + chr1.1:61094569-61094588 MS.gene96759:CDS 30.0%
TGAAAAACATGATCACACTT+TGG - chr1.1:61094662-61094681 None:intergenic 30.0%
! TTTTGAGCTTCAATATCTTG+TGG - chr1.1:61094800-61094819 None:intergenic 30.0%
ACAAATACTACTACAGAACC+CGG + chr1.1:61095054-61095073 MS.gene96759:CDS 35.0%
ACGATTATTATAGCCATGGA+AGG - chr1.1:61094371-61094390 None:intergenic 35.0%
AGCTTCAATATCTTGTGGTT+CGG - chr1.1:61094795-61094814 None:intergenic 35.0%
ATTACATAGAGCTAGAAGCT+TGG + chr1.1:61095078-61095097 MS.gene96759:CDS 35.0%
ATTTGTTTCCTCACTTCAAC+CGG - chr1.1:61095040-61095059 None:intergenic 35.0%
CGATTATTATAGCCATGGAA+GGG - chr1.1:61094370-61094389 None:intergenic 35.0%
GGTTCATGAACATCAAAACA+CGG + chr1.1:61094835-61094854 MS.gene96759:CDS 35.0%
TCAAAACGAAGCTGTTGAAT+CGG + chr1.1:61094814-61094833 MS.gene96759:CDS 35.0%
! TTGTTCTTCCTCTTTTTCTC+CGG + chr1.1:61094281-61094300 MS.gene96759:CDS 35.0%
!! CTTCTAGCTCTATGTAATTC+CGG - chr1.1:61095076-61095095 None:intergenic 35.0%
!! TTCTAGCTCTATGTAATTCC+GGG - chr1.1:61095075-61095094 None:intergenic 35.0%
ACAGCCGAGTATTCAAAGAT+CGG - chr1.1:61094554-61094573 None:intergenic 40.0%
AGCCATTCATCAATACACTC+AGG - chr1.1:61094686-61094705 None:intergenic 40.0%
CATGAACATCAAAACACGGA+CGG + chr1.1:61094839-61094858 MS.gene96759:CDS 40.0%
GCCATTCATCAATACACTCA+GGG - chr1.1:61094685-61094704 None:intergenic 40.0%
GTTCCCGATCTTTGAATACT+CGG + chr1.1:61094547-61094566 MS.gene96759:CDS 40.0%
! ACCCTGAGTGTATTGATGAA+TGG + chr1.1:61094681-61094700 MS.gene96759:CDS 40.0%
! AGAGTCGTTTGTGTTTTCGT+TGG - chr1.1:61094330-61094349 None:intergenic 40.0%
! AGCTAATTTGGTTCCTCAAC+CGG + chr1.1:61094736-61094755 MS.gene96759:CDS 40.0%
! ATCGCTGCTCTTTTTCTCAT+GGG + chr1.1:61094398-61094417 MS.gene96759:CDS 40.0%
! GAGTGTATTGATGAATGGCT+CGG + chr1.1:61094686-61094705 MS.gene96759:CDS 40.0%
!! ACCAAATTAGCTCTGCAAAC+CGG - chr1.1:61094728-61094747 None:intergenic 40.0%
!! TGTGGTTCGGTATTAATCGA+CGG - chr1.1:61094782-61094801 None:intergenic 40.0%
ACACTGAACGGTTCACTTTG+AGG + chr1.1:61095011-61095030 MS.gene96759:CDS 45.0%
ACCGGGGTTTATTATCAGAC+CGG + chr1.1:61095191-61095210 MS.gene96759:CDS 45.0%
ACCGGTCTGATAATAAACCC+CGG - chr1.1:61095195-61095214 None:intergenic 45.0%
AGAGAAACTAGTTCACGGAG+GGG + chr1.1:61095112-61095131 MS.gene96759:CDS 45.0%
ATGTTGCGTATGCTGTTGGA+AGG - chr1.1:61094461-61094480 None:intergenic 45.0%
CAGACTGTGAACCTCTTGTA+CGG - chr1.1:61094928-61094947 None:intergenic 45.0%
CAGCCGAGTATTCAAAGATC+GGG - chr1.1:61094553-61094572 None:intergenic 45.0%
GAGAGAAACTAGTTCACGGA+GGG + chr1.1:61095111-61095130 MS.gene96759:CDS 45.0%
GGGTTTATTATCAGACCGGT+GGG + chr1.1:61095195-61095214 MS.gene96759:CDS 45.0%
GTAGTAGAGGGAAGTCTGTA+AGG + chr1.1:61095161-61095180 MS.gene96759:CDS 45.0%
GTGGTGAAGGAAGTAGTAGA+GGG + chr1.1:61095149-61095168 MS.gene96759:CDS 45.0%
TACATCTGCTTCAGCAGCTA+CGG + chr1.1:61095297-61095316 MS.gene96759:CDS 45.0%
TCAATCTACATCCGTCGATG+CGG + chr1.1:61094428-61094447 MS.gene96759:CDS 45.0%
TGCCGAGAGAAACTAGTTCA+CGG + chr1.1:61095107-61095126 MS.gene96759:CDS 45.0%
TGGCTTACAGTCAACACTTC+TGG - chr1.1:61094890-61094909 None:intergenic 45.0%
TTCCAACAGCATACGCAACA+TGG + chr1.1:61094460-61094479 MS.gene96759:CDS 45.0%
! CATCGCTGCTCTTTTTCTCA+TGG + chr1.1:61094397-61094416 MS.gene96759:CDS 45.0%
! CTCCGTGAACTAGTTTCTCT+CGG - chr1.1:61095112-61095131 None:intergenic 45.0%
! GCTAATTTGGTTCCTCAACC+GGG + chr1.1:61094737-61094756 MS.gene96759:CDS 45.0%
! GTTTTCGTTGGATTGTGCTC+CGG - chr1.1:61094318-61094337 None:intergenic 45.0%
! TAAAATCGGAAAAGGCGCGT+TGG + chr1.1:61094583-61094602 MS.gene96759:CDS 45.0%
! TCCGGTTTGCAGAGCTAATT+TGG + chr1.1:61094724-61094743 MS.gene96759:CDS 45.0%
!! GTCAACACTTCTGGTTCAGT+TGG - chr1.1:61094881-61094900 None:intergenic 45.0%
!! GTGGTTCGGTATTAATCGAC+GGG - chr1.1:61094781-61094800 None:intergenic 45.0%
AACAGCATACGCAACATGGC+AGG + chr1.1:61094464-61094483 MS.gene96759:CDS 50.0%
AACATGGCAGGAGGTTTAGC+TGG + chr1.1:61094476-61094495 MS.gene96759:CDS 50.0%
AACCGGGTGAGAACACTGAA+CGG + chr1.1:61094999-61095018 MS.gene96759:CDS 50.0%
AACCGTTCAGTGTTCTCACC+CGG - chr1.1:61095004-61095023 None:intergenic 50.0%
ACTACTTCCTTCACCACCAC+CGG - chr1.1:61095146-61095165 None:intergenic 50.0%
CAAGAGGTTCACAGTCTGGT+AGG + chr1.1:61094930-61094949 MS.gene96759:CDS 50.0%
CGAGAGAAACTAGTTCACGG+AGG + chr1.1:61095110-61095129 MS.gene96759:CDS 50.0%
CGGTTCTCATACCACTTGTC+CGG + chr1.1:61094706-61094725 MS.gene96759:CDS 50.0%
CGTACAAGAGGTTCACAGTC+TGG + chr1.1:61094926-61094945 MS.gene96759:CDS 50.0%
GACGACGCTCTTACAAGGAA+AGG - chr1.1:61095238-61095257 None:intergenic 50.0%
GACGCTCTTACAAGGAAAGG+TGG - chr1.1:61095235-61095254 None:intergenic 50.0%
GGGGTTTATTATCAGACCGG+TGG + chr1.1:61095194-61095213 MS.gene96759:CDS 50.0%
GGTGGTGAAGGAAGTAGTAG+AGG + chr1.1:61095148-61095167 MS.gene96759:CDS 50.0%
GTAGAGGGAAGTCTGTAAGG+CGG + chr1.1:61095164-61095183 MS.gene96759:CDS 50.0%
GTGAACCTCTTGTACGGTTC+CGG - chr1.1:61094922-61094941 None:intergenic 50.0%
TAGCCATGGAAGGGCTTACA+CGG - chr1.1:61094361-61094380 None:intergenic 50.0%
TCATCGACGACGCTCTTACA+AGG - chr1.1:61095243-61095262 None:intergenic 50.0%
TGCCATGTTGCGTATGCTGT+TGG - chr1.1:61094465-61094484 None:intergenic 50.0%
! ATACCGTGAACCGATTCACC+CGG - chr1.1:61094758-61094777 None:intergenic 50.0%
!! ACGGTTCACTTTGAGGCTAC+CGG + chr1.1:61095018-61095037 MS.gene96759:CDS 50.0%
!! AGACCGGTGGGTTTTTACGA+TGG + chr1.1:61095207-61095226 MS.gene96759:CDS 50.0%
!! TTGTAAGAGCGTCGTCGATG+AGG + chr1.1:61095242-61095261 MS.gene96759:CDS 50.0%
!! TTTTCGAGGTCTCACTCGAC+CGG + chr1.1:61094962-61094981 MS.gene96759:CDS 50.0%
!!! GTAGGCTTCGTTGGTTTTCG+AGG + chr1.1:61094948-61094967 MS.gene96759:CDS 50.0%
AAGGTGAATCGCCGCATCGA+CGG - chr1.1:61094442-61094461 None:intergenic 55.0%
AGCATACGCAACATGGCAGG+AGG + chr1.1:61094467-61094486 MS.gene96759:CDS 55.0%
AGCTCTGCAAACCGGACAAG+TGG - chr1.1:61094720-61094739 None:intergenic 55.0%
AGGGAAGTCTGTAAGGCGGT+TGG + chr1.1:61095168-61095187 MS.gene96759:CDS 55.0%
AGTCTGTAAGGCGGTTGGAC+CGG + chr1.1:61095173-61095192 MS.gene96759:CDS 55.0%
ATCTGCTTCAGCAGCTACGG+CGG + chr1.1:61095300-61095319 MS.gene96759:CDS 55.0%
CAACCGTGTAAGCCCTTCCA+TGG + chr1.1:61094355-61094374 MS.gene96759:CDS 55.0%
CACAGTCTGGTAGGCTTCGT+TGG + chr1.1:61094939-61094958 MS.gene96759:CDS 55.0%
CGGTTGAACCACCGAATGAC+CGG - chr1.1:61094984-61095003 None:intergenic 55.0%
CTGAACCGGAACCGTACAAG+AGG + chr1.1:61094914-61094933 MS.gene96759:CDS 55.0%
CTGTAAGCCAGACGCTGAAC+CGG + chr1.1:61094900-61094919 MS.gene96759:CDS 55.0%
GCGCCATCGTAAAAACCCAC+CGG - chr1.1:61095213-61095232 None:intergenic 55.0%
GGTTCCTCAACCGGGTGAAT+CGG + chr1.1:61094745-61094764 MS.gene96759:CDS 55.0%
GTCGTCGATGAGGTCACCAA+GGG + chr1.1:61095252-61095271 MS.gene96759:CDS 55.0%
GTCTCACTCGACCGGTCATT+CGG + chr1.1:61094970-61094989 MS.gene96759:CDS 55.0%
TCACGGAGGGGTTATCGAAC+CGG + chr1.1:61095124-61095143 MS.gene96759:CDS 55.0%
TTGGATTGTGCTCCGGCGAA+GGG - chr1.1:61094311-61094330 None:intergenic 55.0%
! CAACCGGGTGAATCGGTTCA+CGG + chr1.1:61094752-61094771 MS.gene96759:CDS 55.0%
! CGGTCATTCGGTGGTTCAAC+CGG + chr1.1:61094982-61095001 MS.gene96759:CDS 55.0%
! GGTCATTCGGTGGTTCAACC+GGG + chr1.1:61094983-61095002 MS.gene96759:CDS 55.0%
! TATCGAACCGGTGGTGGTGA+AGG + chr1.1:61095136-61095155 MS.gene96759:CDS 55.0%
! TGAACCGATTCACCCGGTTG+AGG - chr1.1:61094752-61094771 None:intergenic 55.0%
! TGAGGCTACCGGTTGAAGTG+AGG + chr1.1:61095029-61095048 MS.gene96759:CDS 55.0%
!! GTGGCTAGTAGCTCTGGTGA+AGG + chr1.1:61095274-61095293 MS.gene96759:CDS 55.0%
AGGGGACGCCGGAGAAAAAG+AGG - chr1.1:61094292-61094311 None:intergenic 60.0%
AGGGGTTATCGAACCGGTGG+TGG + chr1.1:61095130-61095149 MS.gene96759:CDS 60.0%
CCAAGGGTGGCTAGTAGCTC+TGG + chr1.1:61095268-61095287 MS.gene96759:CDS 60.0%
CCAGAGCTACTAGCCACCCT+TGG - chr1.1:61095271-61095290 None:intergenic 60.0%
CGTCGTCGATGAGGTCACCA+AGG + chr1.1:61095251-61095270 MS.gene96759:CDS 60.0%
GTCGATGAGGTCACCAAGGG+TGG + chr1.1:61095255-61095274 MS.gene96759:CDS 60.0%
GTCTGTAAGGCGGTTGGACC+GGG + chr1.1:61095174-61095193 MS.gene96759:CDS 60.0%
GTTGGATTGTGCTCCGGCGA+AGG - chr1.1:61094312-61094331 None:intergenic 60.0%
TACGGTTCCGGTTCAGCGTC+TGG - chr1.1:61094910-61094929 None:intergenic 60.0%
TCACTCGACCGGTCATTCGG+TGG + chr1.1:61094973-61094992 MS.gene96759:CDS 60.0%
TCTGTAAGGCGGTTGGACCG+GGG + chr1.1:61095175-61095194 MS.gene96759:CDS 60.0%
TGGATTGTGCTCCGGCGAAG+GGG - chr1.1:61094310-61094329 None:intergenic 60.0%
! AGCGCGTGGTCTTGACGCAT+CGG + chr1.1:61094514-61094533 MS.gene96759:CDS 60.0%
CGGAGGGGTTATCGAACCGG+TGG + chr1.1:61095127-61095146 MS.gene96759:CDS 65.0%
TGCTTCAGCAGCTACGGCGG+CGG + chr1.1:61095303-61095322 MS.gene96759:CDS 65.0%
TTCTCCGGCGTCCCCTTCGC+CGG + chr1.1:61094296-61094315 MS.gene96759:CDS 70.0%
!! CGGCGGTTGTTGACTCCCCG+CGG + chr1.1:61095320-61095339 MS.gene96759:CDS 70.0%
!! TGTTGACTCCCCGCGGCCAC+CGG + chr1.1:61095327-61095346 MS.gene96759:CDS 70.0%
CGTTCACGACGCGCAGCGCG+TGG + chr1.1:61094500-61094519 MS.gene96759:CDS 75.0%
TGCTCCGGCGAAGGGGACGC+CGG - chr1.1:61094303-61094322 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 61094233 61095354 61094233 ID=MS.gene96759
chr1.1 mRNA 61094233 61095354 61094233 ID=MS.gene96759.t1;Parent=MS.gene96759
chr1.1 exon 61094233 61095354 61094233 ID=MS.gene96759.t1.exon1;Parent=MS.gene96759.t1
chr1.1 CDS 61094233 61095354 61094233 ID=cds.MS.gene96759.t1;Parent=MS.gene96759.t1
Gene Sequence

>MS.gene96759

ATGGATAACTCATATCAAAATGACAAAACTATCCTTGTGTGTTTTTTCTTGTTCTTCCTCTTTTTCTCCGGCGTCCCCTTCGCCGGAGCACAATCCAACGAAAACACAAACGACTCTTATTACAACCGTGTAAGCCCTTCCATGGCTATAATAATCGTAATTCTCATCGCTGCTCTTTTTCTCATGGGTTTCTTCTCAATCTACATCCGTCGATGCGGCGATTCACCTTCCAACAGCATACGCAACATGGCAGGAGGTTTAGCTGGACGTTCACGACGCGCAGCGCGTGGTCTTGACGCATCGGTGATCGCGACGTTCCCGATCTTTGAATACTCGGCTGTGAAGATTCATAAAATCGGAAAAGGCGCGTTGGAGTGTGCTGTTTGTTTGAACGAGTTTGAAGAGAGTGAAACGCTGCGTTTGATTCCAAAGTGTGATCATGTTTTTCACCCTGAGTGTATTGATGAATGGCTCGGTTCTCATACCACTTGTCCGGTTTGCAGAGCTAATTTGGTTCCTCAACCGGGTGAATCGGTTCACGGTATCCCGTCGATTAATACCGAACCACAAGATATTGAAGCTCAAAACGAAGCTGTTGAATCGGTTCATGAACATCAAAACACGGACGGTTCTGTAAAAGTCGAGCCAACTGAACCAGAAGTGTTGACTGTAAGCCAGACGCTGAACCGGAACCGTACAAGAGGTTCACAGTCTGGTAGGCTTCGTTGGTTTTCGAGGTCTCACTCGACCGGTCATTCGGTGGTTCAACCGGGTGAGAACACTGAACGGTTCACTTTGAGGCTACCGGTTGAAGTGAGGAAACAAATACTACTACAGAACCCGGAATTACATAGAGCTAGAAGCTTGGTTGTGTTGCCGAGAGAAACTAGTTCACGGAGGGGTTATCGAACCGGTGGTGGTGAAGGAAGTAGTAGAGGGAAGTCTGTAAGGCGGTTGGACCGGGGTTTATTATCAGACCGGTGGGTTTTTACGATGGCGCCACCTTTCCTTGTAAGAGCGTCGTCGATGAGGTCACCAAGGGTGGCTAGTAGCTCTGGTGAAGGTACATCTGCTTCAGCAGCTACGGCGGCGGTTGTTGACTCCCCGCGGCCACCGGTTTAA
Protein sequence

>MS.gene96759.t1

MDNSYQNDKTILVCFFLFFLFFSGVPFAGAQSNENTNDSYYNRVSPSMAIIIVILIAALFLMGFFSIYIRRCGDSPSNSIRNMAGGLAGRSRRAARGLDASVIATFPIFEYSAVKIHKIGKGALECAVCLNEFEESETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGIPSINTEPQDIEAQNEAVESVHEHQNTDGSVKVEPTEPEVLTVSQTLNRNRTRGSQSGRLRWFSRSHSTGHSVVQPGENTERFTLRLPVEVRKQILLQNPELHRARSLVVLPRETSSRRGYRTGGGEGSSRGKSVRRLDRGLLSDRWVFTMAPPFLVRASSMRSPRVASSSGEGTSASAATAAVVDSPRPPV