Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96776.t1 | XP_013456758.1 | 75.5 | 388 | 64 | 2 | 1 | 388 | 1 | 357 | 5.60E-128 | 467.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96776.t1 | A0A072ULX9 | 75.5 | 388 | 64 | 2 | 1 | 388 | 1 | 357 | 4.0e-128 | 467.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060483 | MS.gene96776 | 0.801524 | 8.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96776.t1 | MTR_4g082300 | 88.144 | 388 | 15 | 1 | 1 | 388 | 1 | 357 | 0.0 | 584 |
| MS.gene96776.t1 | MTR_4g082300 | 94.882 | 254 | 13 | 0 | 1 | 254 | 1 | 254 | 6.68e-146 | 414 |
| MS.gene96776.t1 | MTR_4g082300 | 52.804 | 214 | 68 | 3 | 179 | 372 | 47 | 247 | 5.93e-67 | 213 |
| MS.gene96776.t1 | MTR_4g082300 | 57.258 | 124 | 48 | 1 | 264 | 382 | 2 | 125 | 8.90e-34 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96776.t1 | AT1G14060 | 49.580 | 119 | 39 | 3 | 4 | 105 | 26 | 140 | 2.29e-27 | 107 |
| MS.gene96776.t1 | AT1G14060 | 69.492 | 59 | 18 | 0 | 304 | 362 | 82 | 140 | 3.54e-26 | 103 |
| MS.gene96776.t1 | AT1G14060 | 46.667 | 90 | 48 | 0 | 148 | 237 | 51 | 140 | 1.48e-18 | 83.2 |
| MS.gene96776.t1 | AT5G02210 | 47.191 | 89 | 44 | 1 | 34 | 119 | 65 | 153 | 8.17e-18 | 80.5 |
| MS.gene96776.t1 | AT5G02210 | 43.750 | 112 | 47 | 6 | 272 | 379 | 53 | 152 | 2.53e-14 | 70.9 |
| MS.gene96776.t1 | AT5G57570 | 54.545 | 66 | 29 | 1 | 47 | 111 | 53 | 118 | 3.87e-14 | 69.3 |
| MS.gene96776.t1 | AT5G57640 | 48.438 | 64 | 33 | 0 | 302 | 365 | 82 | 145 | 5.50e-14 | 71.2 |
| MS.gene96776.t1 | AT5G57640 | 45.333 | 75 | 41 | 0 | 45 | 119 | 82 | 156 | 1.89e-13 | 69.7 |
Find 118 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCCTTCGGCGGCGGTTTC+TGG | 0.056859 | 4.3:+28135092 | None:intergenic |
| ATTATTATGAACCCATTCTT+AGG | 0.179261 | 4.3:-28134890 | MS.gene96776:CDS |
| CACTCGTTTGTTGCAGTGTA+TGG | 0.222714 | 4.3:-28133502 | MS.gene96776:CDS |
| GGCTTCCTGTTATTTGTTAC+TGG | 0.225860 | 4.3:+28132084 | None:intergenic |
| TGATGGTTTGGCATCGGATT+TGG | 0.227434 | 4.3:+28135154 | None:intergenic |
| GATGGTTTGGCATCGGATTT+GGG | 0.232683 | 4.3:+28135155 | None:intergenic |
| TCCTCTTCGCCTTCTGCTTT+CGG | 0.242262 | 4.3:+28132364 | None:intergenic |
| GGGTTCTGCCTGTTCATTAA+AGG | 0.259132 | 4.3:-28133621 | MS.gene96776:CDS |
| TCGGCGGCGGTTTCTGGTTC+GGG | 0.299995 | 4.3:+28135098 | None:intergenic |
| TTCGGCGGCGGTTTCTGGTT+CGG | 0.312231 | 4.3:+28135097 | None:intergenic |
| CGACCGTGAGTTGGAGTCTA+AGG | 0.345428 | 4.3:-28132476 | MS.gene96776:CDS |
| CGCTTCTCGGTCTTGATGAT+GGG | 0.346732 | 4.3:+28133456 | None:intergenic |
| GACTCCGGTGGTGGTTGATT+GGG | 0.354635 | 4.3:+28135122 | None:intergenic |
| GCGCTTCTCGGTCTTGATGA+TGG | 0.357410 | 4.3:+28133455 | None:intergenic |
| TTGCTCTTCGACGCGCTTCT+CGG | 0.361977 | 4.3:+28133443 | None:intergenic |
| GGAGAAAGAAAAGCAGGATT+TGG | 0.362471 | 4.3:-28134829 | MS.gene96776:CDS |
| GCCTCCGCAGCTGCTTGATC+AGG | 0.365759 | 4.3:+28132388 | None:intergenic |
| TTCTTCATCTTCCTCGCCTT+CGG | 0.365927 | 4.3:+28135079 | None:intergenic |
| AGGGGCTTCTTGTTGATTCT+CGG | 0.366247 | 4.3:+28134794 | None:intergenic |
| GATGATGGGTTTGTAGTAAT+CGG | 0.384814 | 4.3:+28133470 | None:intergenic |
| AGACTCCGGTGGTGGTTGAT+TGG | 0.385111 | 4.3:+28135121 | None:intergenic |
| AGAGCAGGTTACCATTGAAT+TGG | 0.397436 | 4.3:-28134850 | MS.gene96776:CDS |
| AACCGCCTCCTTTCATGAAT+AGG | 0.411096 | 4.3:+28135036 | None:intergenic |
| ATGCTTCTCCGCCCTAAGAA+TGG | 0.411420 | 4.3:+28134878 | None:intergenic |
| GCAGAGACACCTTGGTTGAA+TGG | 0.415028 | 4.3:-28133590 | MS.gene96776:CDS |
| ATCTTCCTCGCCTTCGGCGG+CGG | 0.416651 | 4.3:+28135085 | None:intergenic |
| TTGATTCTCGGCGGCGGCGG+CGG | 0.419964 | 4.3:+28134806 | None:intergenic |
| AACCGTCTCCTTTAATGAAC+AGG | 0.424322 | 4.3:+28133613 | None:intergenic |
| ACCTCGCTGAAAAGTGCTCT+GGG | 0.429532 | 4.3:-28133530 | MS.gene96776:CDS |
| GCAAAGACACGTTCATCGCT+TGG | 0.430395 | 4.3:-28135013 | MS.gene96776:CDS |
| GACCTCGCTGAAAAGTGCTC+TGG | 0.431197 | 4.3:-28133531 | MS.gene96776:CDS |
| GCCTTCGTAGCCTCCGGAGC+TGG | 0.432020 | 4.3:+28133672 | None:intergenic |
| GGGAAGAGGATCTGATGGTT+TGG | 0.434881 | 4.3:+28135142 | None:intergenic |
| CGAAAAGGAGCAACCAGCTC+CGG | 0.436481 | 4.3:-28133685 | MS.gene96776:CDS |
| CAGAGACACCTTGGTTGAAT+GGG | 0.446480 | 4.3:-28133589 | MS.gene96776:CDS |
| CAGAGACACCTTCGTCGATT+GGG | 0.447393 | 4.3:-28132293 | MS.gene96776:CDS |
| GAGGATGGGTCCGTAGTAAT+CGG | 0.451688 | 4.3:+28132174 | None:intergenic |
| TGCTTCTCCGCCCTAAGAAT+GGG | 0.453023 | 4.3:+28134879 | None:intergenic |
| CAAAGACACGTTCATCGCTT+GGG | 0.455392 | 4.3:-28135012 | MS.gene96776:CDS |
| TTATTATGAACCCATTCTTA+GGG | 0.456966 | 4.3:-28134889 | MS.gene96776:CDS |
| GCCCTCAAAGCAAGCCGAAA+AGG | 0.458652 | 4.3:-28133700 | MS.gene96776:CDS |
| GCAGAGACACCTTCGTCGAT+TGG | 0.467963 | 4.3:-28132294 | MS.gene96776:CDS |
| GGCAGAAAACAAAGAGGAGG+AGG | 0.468686 | 4.3:-28133652 | MS.gene96776:CDS |
| GGGTTTGTAGTAATCGGAAC+TGG | 0.476444 | 4.3:+28133476 | None:intergenic |
| TGCAAAATTGAAGCAGTGTA+TGG | 0.476710 | 4.3:-28134925 | MS.gene96776:CDS |
| ACTCGTTTGTTGCAGTGTAT+GGG | 0.481333 | 4.3:-28133501 | MS.gene96776:CDS |
| GCAGTGTATGGATGAACATT+CGG | 0.489367 | 4.3:-28134913 | MS.gene96776:CDS |
| GAAGGCGAAGAGGAGGAAGA+AGG | 0.494264 | 4.3:-28132355 | MS.gene96776:CDS |
| GGTTCGGGAGACTCCGGTGG+TGG | 0.501484 | 4.3:+28135113 | None:intergenic |
| AGAACAAGCCGCCATCGACT+TGG | 0.501554 | 4.3:-28132131 | MS.gene96776:CDS |
| CACATTTGATTAGAATGAGA+AGG | 0.505801 | 4.3:+28133417 | None:intergenic |
| CAGAAAACAAAGAGGAGGAG+GGG | 0.508901 | 4.3:-28133650 | MS.gene96776:CDS |
| TGCTTCTCAGCCATGAGGAT+GGG | 0.510615 | 4.3:+28132160 | None:intergenic |
| TGAATTGGAGAAAGAAAAGC+AGG | 0.511809 | 4.3:-28134835 | MS.gene96776:CDS |
| GTTTCTGGTTCGGGAGACTC+CGG | 0.516638 | 4.3:+28135107 | None:intergenic |
| AGAAACCGCCGCCGAAGGCG+AGG | 0.522261 | 4.3:-28135090 | MS.gene96776:CDS |
| GAACCAGAAACCGCCGCCGA+AGG | 0.523723 | 4.3:-28135095 | MS.gene96776:CDS |
| GCAGAAAACAAAGAGGAGGA+GGG | 0.530209 | 4.3:-28133651 | MS.gene96776:CDS |
| TGCCTGTTCATTAAAGGAGA+CGG | 0.531952 | 4.3:-28133615 | MS.gene96776:CDS |
| ACATTTGATTAGAATGAGAA+GGG | 0.532264 | 4.3:+28133418 | None:intergenic |
| GAAAGCAGAAGGCGAAGAGG+AGG | 0.535433 | 4.3:-28132362 | MS.gene96776:CDS |
| CGTCGTTCAAAAGTGCTCTC+AGG | 0.535919 | 4.3:-28132233 | MS.gene96776:CDS |
| CATACACTGTTTCAAAAGAT+CGG | 0.536650 | 4.3:+28132207 | None:intergenic |
| GGCGAGGAAGATGAAGAAGA+AGG | 0.541499 | 4.3:-28135074 | MS.gene96776:CDS |
| ACCAGCTCCGGAGGCTACGA+AGG | 0.545304 | 4.3:-28133673 | MS.gene96776:CDS |
| TTGGGAGAACTGCATGGATG+AGG | 0.546606 | 4.3:-28132275 | MS.gene96776:CDS |
| GCGGAGGCTCCGAAAGCAGA+AGG | 0.548740 | 4.3:-28132373 | MS.gene96776:CDS |
| AGAAAACAAAGAGGAGGAGG+GGG | 0.550448 | 4.3:-28133649 | MS.gene96776:CDS |
| TTCTTTCTCCAAGTCGATGG+CGG | 0.550499 | 4.3:+28132123 | None:intergenic |
| TCCTGATCAAGCAGCTGCGG+AGG | 0.553128 | 4.3:-28132389 | MS.gene96776:CDS |
| AGGATCTGATGGTTTGGCAT+CGG | 0.555085 | 4.3:+28135148 | None:intergenic |
| TGCCTATTCATGAAAGGAGG+CGG | 0.555309 | 4.3:-28135038 | MS.gene96776:CDS |
| AGGAGGAAGAAGGTGAGTGC+GGG | 0.557082 | 4.3:-28132345 | MS.gene96776:CDS |
| GTGCTTCTCAGCCATGAGGA+TGG | 0.557993 | 4.3:+28132159 | None:intergenic |
| TGATTGGGAAGAGGATCTGA+TGG | 0.558958 | 4.3:+28135137 | None:intergenic |
| TTGTTGATTCTCGGCGGCGG+CGG | 0.565343 | 4.3:+28134803 | None:intergenic |
| GGAGAAGCATGCTGAAGAGC+AGG | 0.570146 | 4.3:-28134865 | MS.gene96776:CDS |
| GGTGGTGGTTGATTGGGAAG+AGG | 0.571966 | 4.3:+28135128 | None:intergenic |
| GATTCTCATTCCGATTACTA+CGG | 0.572132 | 4.3:-28132184 | MS.gene96776:CDS |
| TGCGTGTTCATGAAAGGAGG+TGG | 0.574556 | 4.3:-28132319 | MS.gene96776:CDS |
| GGGTTCTGCGTGTTCATGAA+AGG | 0.574588 | 4.3:-28132325 | MS.gene96776:CDS |
| TCTGGTTCGGGAGACTCCGG+TGG | 0.575115 | 4.3:+28135110 | None:intergenic |
| GAGGAGGAAGAAGGTGAGTG+CGG | 0.578095 | 4.3:-28132346 | MS.gene96776:CDS |
| AGAGGCGAAGGAGAAGAAAG+AGG | 0.580829 | 4.3:-28133553 | MS.gene96776:CDS |
| TCTTCCCAATCAACCACCAC+CGG | 0.583567 | 4.3:-28135126 | MS.gene96776:CDS |
| AGACGGTTGCAGAGACACCT+TGG | 0.584640 | 4.3:-28133598 | MS.gene96776:CDS |
| GGACTGCAGCGACCGTGAGT+TGG | 0.586739 | 4.3:-28132485 | MS.gene96776:intron |
| TTCTCCTGATCAAGCAGCTG+CGG | 0.587127 | 4.3:-28132392 | MS.gene96776:CDS |
| GAACCGCAGTGACCGTGAGT+TGG | 0.587819 | 4.3:-28133742 | MS.gene96776:intron |
| GACTTGTGTGAAAGAGGCGA+AGG | 0.589908 | 4.3:-28133565 | MS.gene96776:CDS |
| TTCATCTTCCTCGCCTTCGG+CGG | 0.591064 | 4.3:+28135082 | None:intergenic |
| TGACCGTGAGTTGGAGTCAA+CGG | 0.592923 | 4.3:-28133733 | MS.gene96776:CDS |
| CGTCGATTGGGAGAACTGCA+TGG | 0.595914 | 4.3:-28132281 | MS.gene96776:CDS |
| GATGAAGAAGAAGGAGAATG+CGG | 0.600982 | 4.3:-28135065 | MS.gene96776:CDS |
| TTACTACGGACCCATCCTCA+TGG | 0.605217 | 4.3:-28132170 | MS.gene96776:CDS |
| TCCGAAAGCAGAAGGCGAAG+AGG | 0.616552 | 4.3:-28132365 | MS.gene96776:CDS |
| ATGGGAGACTTGTGTGAAAG+AGG | 0.616600 | 4.3:-28133571 | MS.gene96776:CDS |
| GTCGACGCCGCCGAACCCAT+CGG | 0.618932 | 4.3:-28135183 | MS.gene96776:CDS |
| TTCTTGTTGATTCTCGGCGG+CGG | 0.623703 | 4.3:+28134800 | None:intergenic |
| ATGGTTTGGCATCGGATTTG+GGG | 0.630819 | 4.3:+28135156 | None:intergenic |
| GGATTCTGCCTATTCATGAA+AGG | 0.631082 | 4.3:-28135044 | MS.gene96776:CDS |
| AAAGGAGCAACCAGCTCCGG+AGG | 0.631961 | 4.3:-28133682 | MS.gene96776:CDS |
| CATTTGATTAGAATGAGAAG+GGG | 0.632779 | 4.3:+28133419 | None:intergenic |
| GAAGGCAGAAAACAAAGAGG+AGG | 0.634435 | 4.3:-28133655 | MS.gene96776:CDS |
| TTCTGCCTATTCATGAAAGG+AGG | 0.642527 | 4.3:-28135041 | MS.gene96776:CDS |
| TTATGAACCCATTCTTAGGG+CGG | 0.646080 | 4.3:-28134886 | MS.gene96776:CDS |
| CAATGTGCTTCTCAGCCATG+AGG | 0.656491 | 4.3:+28132155 | None:intergenic |
| TTCTGCGTGTTCATGAAAGG+AGG | 0.661603 | 4.3:-28132322 | MS.gene96776:CDS |
| TTACCGTTGACTCCAACTCA+CGG | 0.671368 | 4.3:+28133730 | None:intergenic |
| GCAGTTCTCCCAATCGACGA+AGG | 0.672031 | 4.3:+28132285 | None:intergenic |
| TTGCCTTAGACTCCAACTCA+CGG | 0.673830 | 4.3:+28132473 | None:intergenic |
| TGAGGCAGAGAAGAACAAAG+AGG | 0.681593 | 4.3:-28132257 | MS.gene96776:CDS |
| TACGAAGGCAGAAAACAAAG+AGG | 0.688194 | 4.3:-28133658 | MS.gene96776:CDS |
| GGCTTCTTGTTGATTCTCGG+CGG | 0.692078 | 4.3:+28134797 | None:intergenic |
| CATACACTGCAACAAACGAG+TGG | 0.693657 | 4.3:+28133503 | None:intergenic |
| TCTTGTTGAAAAGTGCGCTG+AGG | 0.705355 | 4.3:-28134952 | MS.gene96776:CDS |
| ACAAGTCTCCCATTCAACCA+AGG | 0.709995 | 4.3:+28133581 | None:intergenic |
| CCTCGCTGAAAAGTGCTCTG+GGG | 0.729378 | 4.3:-28133529 | MS.gene96776:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATAAAAATAGGAA+TGG | + | chr4.3:28133898-28133917 | None:intergenic | 10.0% |
| !! | ATATTTCAATTGATAAAATT+AGG | - | chr4.3:28132608-28132627 | MS.gene96776:intron | 10.0% |
| !!! | TTGTTTTTTAATTTTTGATA+TGG | - | chr4.3:28132757-28132776 | MS.gene96776:intron | 10.0% |
| !!! | TTTTTTTTAAACTTAATTGT+TGG | - | chr4.3:28134772-28134791 | MS.gene96776:intron | 10.0% |
| !!! | ATTTTATCAATTGAAATATG+TGG | + | chr4.3:28132607-28132626 | None:intergenic | 15.0% |
| !!! | TCTATTTAATTTGTTGATTT+GGG | - | chr4.3:28133040-28133059 | MS.gene96776:intron | 15.0% |
| !!! | TTCTATTTAATTTGTTGATT+TGG | - | chr4.3:28133039-28133058 | MS.gene96776:intron | 15.0% |
| !!! | TTGTTTTTAATTTTTTGACA+TGG | - | chr4.3:28134109-28134128 | MS.gene96776:intron | 15.0% |
| !!! | TTTTATCAATTGAAATATGT+GGG | + | chr4.3:28132606-28132625 | None:intergenic | 15.0% |
| !! | TAAGTGGAATTATTATTGAT+TGG | - | chr4.3:28132707-28132726 | MS.gene96776:intron | 20.0% |
| !! | TAATAAGTGGAATTACTAAT+AGG | - | chr4.3:28134059-28134078 | MS.gene96776:intron | 20.0% |
| !! | TTTGAGAATCTTTAATAATG+AGG | - | chr4.3:28132928-28132947 | MS.gene96776:intron | 20.0% |
| !!! | AAAAATCACTTTTGATTAGA+AGG | + | chr4.3:28132507-28132526 | None:intergenic | 20.0% |
| !!! | AAAATCACTTTTGATTAGAA+GGG | + | chr4.3:28132506-28132525 | None:intergenic | 20.0% |
| ! | AACTAAATAGCTATAGGTTT+AGG | + | chr4.3:28134648-28134667 | None:intergenic | 25.0% |
| ! | ACATTTGATTAGAATGAGAA+GGG | + | chr4.3:28133863-28133882 | None:intergenic | 25.0% |
| ! | AGACTAGAGATTCTTATTAA+TGG | - | chr4.3:28134514-28134533 | MS.gene96776:intron | 25.0% |
| ! | AGAGTAGAGATTCTAATTAA+TGG | - | chr4.3:28133164-28133183 | MS.gene96776:intron | 25.0% |
| ! | ATATTTGAGAATCTCTAATG+GGG | - | chr4.3:28134251-28134270 | MS.gene96776:intron | 25.0% |
| ! | ATTATTATGAACCCATTCTT+AGG | - | chr4.3:28132388-28132407 | MS.gene96776:CDS | 25.0% |
| ! | CAATGCATAATATATATGCA+AGG | - | chr4.3:28133258-28133277 | MS.gene96776:intron | 25.0% |
| ! | GATATTTGAGAATCTCTAAT+GGG | - | chr4.3:28134250-28134269 | MS.gene96776:intron | 25.0% |
| ! | TCACTAATTACTGAATTAGT+TGG | + | chr4.3:28134427-28134446 | None:intergenic | 25.0% |
| ! | TGATATTTGAGAATCTCTAA+TGG | - | chr4.3:28134249-28134268 | MS.gene96776:intron | 25.0% |
| ! | TTATTATGAACCCATTCTTA+GGG | - | chr4.3:28132389-28132408 | MS.gene96776:CDS | 25.0% |
| ! | TTCAGTAATTAGTGATTCAA+TGG | - | chr4.3:28134432-28134451 | MS.gene96776:intron | 25.0% |
| ! | TTCAGTAATTAGTGATTTAG+TGG | - | chr4.3:28133103-28133122 | MS.gene96776:intron | 25.0% |
| ! | TTGATATGGTTATGTATAAG+TGG | - | chr4.3:28132771-28132790 | MS.gene96776:intron | 25.0% |
| !! | ATAGATATGTGAATCTCTTT+TGG | - | chr4.3:28132954-28132973 | MS.gene96776:intron | 25.0% |
| !! | TAGATATGTGAATCTCTTTT+GGG | - | chr4.3:28132955-28132974 | MS.gene96776:intron | 25.0% |
| !! | TCAATTTTTGTGACAATAAG+TGG | - | chr4.3:28132691-28132710 | MS.gene96776:intron | 25.0% |
| !!! | AAATCACTTTTGATTAGAAG+GGG | + | chr4.3:28132505-28132524 | None:intergenic | 25.0% |
| !!! | CTATTTTTTTTTTTTGGTGG+TGG | + | chr4.3:28133303-28133322 | None:intergenic | 25.0% |
| !!! | GGTAATTGTATTTTGATTGA+GGG | - | chr4.3:28133124-28133143 | MS.gene96776:intron | 25.0% |
| !!! | GTAGCGCTATTTTTTTTTTT+TGG | + | chr4.3:28133309-28133328 | None:intergenic | 25.0% |
| !!! | TGGTAATTGTATTTTGATTG+AGG | - | chr4.3:28133123-28133142 | MS.gene96776:intron | 25.0% |
| AATTACTGAATTAGTTGGCA+CGG | + | chr4.3:28134422-28134441 | None:intergenic | 30.0% | |
| AGTTGTAGAGTTAAGCTATT+TGG | + | chr4.3:28134564-28134583 | None:intergenic | 30.0% | |
| ATAATATATATGCAAGGTCC+GGG | - | chr4.3:28133264-28133283 | MS.gene96776:intron | 30.0% | |
| ATCATCCTTTACAATGCATA+TGG | - | chr4.3:28132864-28132883 | MS.gene96776:intron | 30.0% | |
| ATTCTTACACAACAGCAAAT+AGG | + | chr4.3:28132846-28132865 | None:intergenic | 30.0% | |
| CACATTTGATTAGAATGAGA+AGG | + | chr4.3:28133864-28133883 | None:intergenic | 30.0% | |
| CATAATATATATGCAAGGTC+CGG | - | chr4.3:28133263-28133282 | MS.gene96776:intron | 30.0% | |
| CATACACTGTTTCAAAAGAT+CGG | + | chr4.3:28135074-28135093 | None:intergenic | 30.0% | |
| CATTTGATTAGAATGAGAAG+GGG | + | chr4.3:28133862-28133881 | None:intergenic | 30.0% | |
| GGTTGAAGTATGTGATTAAA+TGG | - | chr4.3:28132976-28132995 | MS.gene96776:intron | 30.0% | |
| TCAAAAGTCAACAAACTAAG+TGG | + | chr4.3:28132913-28132932 | None:intergenic | 30.0% | |
| TCTAGTCTCTTACTACTAAA+TGG | + | chr4.3:28134502-28134521 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTCTCCAATTCAA+TGG | + | chr4.3:28132442-28132461 | None:intergenic | 30.0% |
| ! | GTGTTGTCATTTGAAATAAG+TGG | + | chr4.3:28133967-28133986 | None:intergenic | 30.0% |
| ! | TGAGATATGTGAATCTCTTT+TGG | - | chr4.3:28134277-28134296 | MS.gene96776:intron | 30.0% |
| !! | ACCTATAGCTATTTAGTTTG+AGG | - | chr4.3:28134650-28134669 | MS.gene96776:intron | 30.0% |
| !! | ATGTGTGTTTGACTTCATTT+TGG | - | chr4.3:28134334-28134353 | MS.gene96776:intron | 30.0% |
| !! | CTTTTTCTGGTCATAATAAG+TGG | - | chr4.3:28134046-28134065 | MS.gene96776:intron | 30.0% |
| !!! | GCGCTATTTTTTTTTTTTGG+TGG | + | chr4.3:28133306-28133325 | None:intergenic | 30.0% |
| ACATGGTTGTTATGTATCAG+TGG | - | chr4.3:28134126-28134145 | MS.gene96776:intron | 35.0% | |
| ACTTCTGGTATAGAATGAGA+AGG | + | chr4.3:28133348-28133367 | None:intergenic | 35.0% | |
| AGGTACCATATGCATTGTAA+AGG | + | chr4.3:28132872-28132891 | None:intergenic | 35.0% | |
| AGTAGCGCTATTTAGTTAGT+GGG | + | chr4.3:28133206-28133225 | None:intergenic | 35.0% | |
| AGTTAAGCTATTTGGTTGGT+GGG | + | chr4.3:28134556-28134575 | None:intergenic | 35.0% | |
| CAGTTACTCAGATATAGTGA+TGG | - | chr4.3:28133447-28133466 | MS.gene96776:CDS | 35.0% | |
| CTAATGATTCGCTTGCTTAT+TGG | + | chr4.3:28133371-28133390 | None:intergenic | 35.0% | |
| GATTCTCATTCCGATTACTA+CGG | - | chr4.3:28135094-28135113 | MS.gene96776:CDS | 35.0% | |
| GCCTCAAACTAAATAGCTAT+AGG | + | chr4.3:28134654-28134673 | None:intergenic | 35.0% | |
| GTAGAGTTAAGCTATTTGGT+TGG | + | chr4.3:28134560-28134579 | None:intergenic | 35.0% | |
| TAAGTGAGATGAAACACACT+GGG | - | chr4.3:28134720-28134739 | MS.gene96776:intron | 35.0% | |
| TAATATATATGCAAGGTCCG+GGG | - | chr4.3:28133265-28133284 | MS.gene96776:intron | 35.0% | |
| TGAATTGGAGAAAGAAAAGC+AGG | - | chr4.3:28132443-28132462 | MS.gene96776:CDS | 35.0% | |
| TGCAAAATTGAAGCAGTGTA+TGG | - | chr4.3:28132353-28132372 | MS.gene96776:CDS | 35.0% | |
| TTAAGTGAGATGAAACACAC+TGG | - | chr4.3:28134719-28134738 | MS.gene96776:intron | 35.0% | |
| ! | AGGAGAAACATTTTCTGTCT+TGG | + | chr4.3:28134873-28134892 | None:intergenic | 35.0% |
| !! | ACTCAGATATAGTGATGGAT+TGG | - | chr4.3:28133452-28133471 | MS.gene96776:CDS | 35.0% |
| !! | CTCAGATATAGTGATGGATT+GGG | - | chr4.3:28133453-28133472 | MS.gene96776:CDS | 35.0% |
| !! | CTGTGTGTTTGACTTCTTTT+GGG | - | chr4.3:28133011-28133030 | MS.gene96776:intron | 35.0% |
| !! | GATGATGGGTTTGTAGTAAT+CGG | + | chr4.3:28133811-28133830 | None:intergenic | 35.0% |
| !! | GCCTAGCTATTTAGTTTGAT+CGG | - | chr4.3:28133404-28133423 | MS.gene96776:intron | 35.0% |
| !! | TCTGTGTGTTTGACTTCTTT+TGG | - | chr4.3:28133010-28133029 | MS.gene96776:intron | 35.0% |
| !! | TTGTTGATGATTTATGCCCT+AGG | - | chr4.3:28134162-28134181 | MS.gene96776:intron | 35.0% |
| !!! | CGATCTTTTGAAACAGTGTA+TGG | - | chr4.3:28135072-28135091 | MS.gene96776:CDS | 35.0% |
| !!! | CTGCATTTTGATTGTTCTCT+TGG | - | chr4.3:28134458-28134477 | MS.gene96776:intron | 35.0% |
| !!! | TTTTTTTTTTTGGTGGTGGC+CGG | + | chr4.3:28133299-28133318 | None:intergenic | 35.0% |
| AACCGTCTCCTTTAATGAAC+AGG | + | chr4.3:28133668-28133687 | None:intergenic | 40.0% | |
| ACGAGAATGATGCTTCATCA+TGG | - | chr4.3:28134208-28134227 | MS.gene96776:intron | 40.0% | |
| ACTGTGTATCAGTGTATGAG+AGG | - | chr4.3:28132658-28132677 | MS.gene96776:intron | 40.0% | |
| AGAGCAGGTTACCATTGAAT+TGG | - | chr4.3:28132428-28132447 | MS.gene96776:CDS | 40.0% | |
| ATCAGTGTATGAGAGGTTGA+GGG | - | chr4.3:28132665-28132684 | MS.gene96776:intron | 40.0% | |
| ATGCAGTCACTCAAAGTTAG+TGG | - | chr4.3:28134696-28134715 | MS.gene96776:intron | 40.0% | |
| ATTCTCGTGCAATCGCAAAT+AGG | + | chr4.3:28134196-28134215 | None:intergenic | 40.0% | |
| CAAATAGGCTTAGCTACCTA+GGG | + | chr4.3:28134181-28134200 | None:intergenic | 40.0% | |
| CGAGAATGATGCTTCATCAT+GGG | - | chr4.3:28134209-28134228 | MS.gene96776:intron | 40.0% | |
| GAACTAGTTAGCACAGACAA+AGG | + | chr4.3:28133086-28133105 | None:intergenic | 40.0% | |
| GAGTAGCGCTATTTAGTTAG+TGG | + | chr4.3:28133207-28133226 | None:intergenic | 40.0% | |
| GAGTTAAGCTATTTGGTTGG+TGG | + | chr4.3:28134557-28134576 | None:intergenic | 40.0% | |
| GATGAAGAAGAAGGAGAATG+CGG | - | chr4.3:28132213-28132232 | MS.gene96776:CDS | 40.0% | |
| GCAGTGTATGGATGAACATT+CGG | - | chr4.3:28132365-28132384 | MS.gene96776:CDS | 40.0% | |
| GCCGATCAAACTAAATAGCT+AGG | + | chr4.3:28133408-28133427 | None:intergenic | 40.0% | |
| GGAGAAAGAAAAGCAGGATT+TGG | - | chr4.3:28132449-28132468 | MS.gene96776:CDS | 40.0% | |
| GGATTCTGCCTATTCATGAA+AGG | - | chr4.3:28132234-28132253 | MS.gene96776:CDS | 40.0% | |
| TACCTAGTGCTTGTTTGGTT+TGG | - | chr4.3:28132887-28132906 | MS.gene96776:intron | 40.0% | |
| TACGAAGGCAGAAAACAAAG+AGG | - | chr4.3:28133620-28133639 | MS.gene96776:CDS | 40.0% | |
| TATCAGTGTATGAGAGGTTG+AGG | - | chr4.3:28132664-28132683 | MS.gene96776:intron | 40.0% | |
| TATGGTACCTAGTGCTTGTT+TGG | - | chr4.3:28132882-28132901 | MS.gene96776:intron | 40.0% | |
| TGCCTGTTCATTAAAGGAGA+CGG | - | chr4.3:28133663-28133682 | MS.gene96776:CDS | 40.0% | |
| TTATGAACCCATTCTTAGGG+CGG | - | chr4.3:28132392-28132411 | MS.gene96776:CDS | 40.0% | |
| TTCTGCCTATTCATGAAAGG+AGG | - | chr4.3:28132237-28132256 | MS.gene96776:CDS | 40.0% | |
| ! | ACTCGTTTGTTGCAGTGTAT+GGG | - | chr4.3:28133777-28133796 | MS.gene96776:intron | 40.0% |
| ! | AGAGAGTGGTTCTCTTTTTC+TGG | - | chr4.3:28134033-28134052 | MS.gene96776:intron | 40.0% |
| ! | CTTTTCTTTCTCCAAGTCGA+TGG | + | chr4.3:28135161-28135180 | None:intergenic | 40.0% |
| !! | CATATTTGCTATCACGTGAG+TGG | + | chr4.3:28134679-28134698 | None:intergenic | 40.0% |
| !! | TTTAGTTTGATCGGCTCACT+TGG | - | chr4.3:28133413-28133432 | MS.gene96776:intron | 40.0% |
| !!! | TTTTTTTTTTGGTGGTGGCC+GGG | + | chr4.3:28133298-28133317 | None:intergenic | 40.0% |
| AACCGCCTCCTTTCATGAAT+AGG | + | chr4.3:28132245-28132264 | None:intergenic | 45.0% | |
| ACAAGTCTCCCATTCAACCA+AGG | + | chr4.3:28133700-28133719 | None:intergenic | 45.0% | |
| AGAAAACAAAGAGGAGGAGG+GGG | - | chr4.3:28133629-28133648 | MS.gene96776:CDS | 45.0% | |
| AGGCTTAGCTAGCTAAGCTA+AGG | + | chr4.3:28132826-28132845 | None:intergenic | 45.0% | |
| ATGGGAGACTTGTGTGAAAG+AGG | - | chr4.3:28133707-28133726 | MS.gene96776:CDS | 45.0% | |
| CAAAGACACGTTCATCGCTT+GGG | - | chr4.3:28132266-28132285 | MS.gene96776:CDS | 45.0% | |
| CAGAAAACAAAGAGGAGGAG+GGG | - | chr4.3:28133628-28133647 | MS.gene96776:CDS | 45.0% | |
| CAGAGACACCTTGGTTGAAT+GGG | - | chr4.3:28133689-28133708 | MS.gene96776:CDS | 45.0% | |
| CATACACTGCAACAAACGAG+TGG | + | chr4.3:28133778-28133797 | None:intergenic | 45.0% | |
| CTAATGAATTGCTCGCGTAC+TGG | + | chr4.3:28134617-28134636 | None:intergenic | 45.0% | |
| GAAGGCAGAAAACAAAGAGG+AGG | - | chr4.3:28133623-28133642 | MS.gene96776:CDS | 45.0% | |
| GCAAATAGGCTTAGCTACCT+AGG | + | chr4.3:28134182-28134201 | None:intergenic | 45.0% | |
| GCAGAAAACAAAGAGGAGGA+GGG | - | chr4.3:28133627-28133646 | MS.gene96776:CDS | 45.0% | |
| GGGTTCTGCCTGTTCATTAA+AGG | - | chr4.3:28133657-28133676 | MS.gene96776:CDS | 45.0% | |
| GGGTTTGTAGTAATCGGAAC+TGG | + | chr4.3:28133805-28133824 | None:intergenic | 45.0% | |
| TCGCTTGCTTATTGGACTTC+TGG | + | chr4.3:28133363-28133382 | None:intergenic | 45.0% | |
| TGAGGCAGAGAAGAACAAAG+AGG | - | chr4.3:28135021-28135040 | MS.gene96776:CDS | 45.0% | |
| TGATTGGGAAGAGGATCTGA+TGG | + | chr4.3:28132144-28132163 | None:intergenic | 45.0% | |
| TGCCTATTCATGAAAGGAGG+CGG | - | chr4.3:28132240-28132259 | MS.gene96776:CDS | 45.0% | |
| TGTGTGCAAGAGAAAGAGAG+TGG | - | chr4.3:28134019-28134038 | MS.gene96776:intron | 45.0% | |
| TTCTGCGTGTTCATGAAAGG+AGG | - | chr4.3:28134956-28134975 | MS.gene96776:CDS | 45.0% | |
| TTCTTCATCTTCCTCGCCTT+CGG | + | chr4.3:28132202-28132221 | None:intergenic | 45.0% | |
| TTCTTTCTCCAAGTCGATGG+CGG | + | chr4.3:28135158-28135177 | None:intergenic | 45.0% | |
| TTGCCTTAGACTCCAACTCA+CGG | + | chr4.3:28134808-28134827 | None:intergenic | 45.0% | |
| ! | AGGATCTGATGGTTTGGCAT+CGG | + | chr4.3:28132133-28132152 | None:intergenic | 45.0% |
| ! | ATGGTTTGGCATCGGATTTG+GGG | + | chr4.3:28132125-28132144 | None:intergenic | 45.0% |
| ! | CACTCGTTTGTTGCAGTGTA+TGG | - | chr4.3:28133776-28133795 | MS.gene96776:intron | 45.0% |
| ! | CTCGTTTTCGTCATGCTTCA+GGG | + | chr4.3:28134840-28134859 | None:intergenic | 45.0% |
| ! | GATGGTTTGGCATCGGATTT+GGG | + | chr4.3:28132126-28132145 | None:intergenic | 45.0% |
| ! | TCGTTTTCGTCATGCTTCAG+GGG | + | chr4.3:28134839-28134858 | None:intergenic | 45.0% |
| ! | TCTTGTTGAAAAGTGCGCTG+AGG | - | chr4.3:28132326-28132345 | MS.gene96776:CDS | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr4.3:28133234-28133253 | MS.gene96776:intron | 45.0% |
| ! | TGATGGTTTGGCATCGGATT+TGG | + | chr4.3:28132127-28132146 | None:intergenic | 45.0% |
| !! | AGGGGCTTCTTGTTGATTCT+CGG | + | chr4.3:28132487-28132506 | None:intergenic | 45.0% |
| !! | TCCTTTTCGGCTTGCTTTGA+GGG | + | chr4.3:28133582-28133601 | None:intergenic | 45.0% |
| !! | TTACCGTTGACTCCAACTCA+CGG | + | chr4.3:28133551-28133570 | None:intergenic | 45.0% |
| !! | ATAAAAACAATAATTTAAAA+AGG | + | chr4.3:28132542-28132561 | None:intergenic | 5.0% |
| !! | ATGAAATATAAAATAAAAAT+AGG | + | chr4.3:28133903-28133922 | None:intergenic | 5.0% |
| !! | TAAAAACAATAATTTAAAAA+GGG | + | chr4.3:28132541-28132560 | None:intergenic | 5.0% |
| AGAGGCGAAGGAGAAGAAAG+AGG | - | chr4.3:28133725-28133744 | MS.gene96776:CDS | 50.0% | |
| ATGCTTCTCCGCCCTAAGAA+TGG | + | chr4.3:28132403-28132422 | None:intergenic | 50.0% | |
| CAATGTGCTTCTCAGCCATG+AGG | + | chr4.3:28135126-28135145 | None:intergenic | 50.0% | |
| GACTTGTGTGAAAGAGGCGA+AGG | - | chr4.3:28133713-28133732 | MS.gene96776:CDS | 50.0% | |
| GAGGATGGGTCCGTAGTAAT+CGG | + | chr4.3:28135107-28135126 | None:intergenic | 50.0% | |
| GCAAAGACACGTTCATCGCT+TGG | - | chr4.3:28132265-28132284 | MS.gene96776:CDS | 50.0% | |
| GCAGAGACACCTTGGTTGAA+TGG | - | chr4.3:28133688-28133707 | MS.gene96776:CDS | 50.0% | |
| GCGTACTGGACTTCTGGTAT+AGG | + | chr4.3:28134603-28134622 | None:intergenic | 50.0% | |
| GGCAGAAAACAAAGAGGAGG+AGG | - | chr4.3:28133626-28133645 | MS.gene96776:CDS | 50.0% | |
| GGCCAAACCAAACAAGCACT+AGG | + | chr4.3:28132892-28132911 | None:intergenic | 50.0% | |
| GGCGAGGAAGATGAAGAAGA+AGG | - | chr4.3:28132204-28132223 | MS.gene96776:CDS | 50.0% | |
| GGGAAGAGGATCTGATGGTT+TGG | + | chr4.3:28132139-28132158 | None:intergenic | 50.0% | |
| GGGTTCTGCGTGTTCATGAA+AGG | - | chr4.3:28134953-28134972 | MS.gene96776:CDS | 50.0% | |
| TCCTCTTCGCCTTCTGCTTT+CGG | + | chr4.3:28134917-28134936 | None:intergenic | 50.0% | |
| TCTTCCCAATCAACCACCAC+CGG | - | chr4.3:28132152-28132171 | MS.gene96776:CDS | 50.0% | |
| TGCGTGTTCATGAAAGGAGG+TGG | - | chr4.3:28134959-28134978 | MS.gene96776:CDS | 50.0% | |
| TGCTTCTCAGCCATGAGGAT+GGG | + | chr4.3:28135121-28135140 | None:intergenic | 50.0% | |
| TGCTTCTCCGCCCTAAGAAT+GGG | + | chr4.3:28132402-28132421 | None:intergenic | 50.0% | |
| TTACTACGGACCCATCCTCA+TGG | - | chr4.3:28135108-28135127 | MS.gene96776:CDS | 50.0% | |
| TTCTCCTGATCAAGCAGCTG+CGG | - | chr4.3:28134886-28134905 | MS.gene96776:CDS | 50.0% | |
| TTGGGAGAACTGCATGGATG+AGG | - | chr4.3:28135003-28135022 | MS.gene96776:CDS | 50.0% | |
| ! | CAGAGACACCTTCGTCGATT+GGG | - | chr4.3:28134985-28135004 | MS.gene96776:CDS | 50.0% |
| ! | CGCTTCTCGGTCTTGATGAT+GGG | + | chr4.3:28133825-28133844 | None:intergenic | 50.0% |
| ! | GCTCGTTTTCGTCATGCTTC+AGG | + | chr4.3:28134841-28134860 | None:intergenic | 50.0% |
| ! | TGACCGTGAGTTGGAGTCAA+CGG | - | chr4.3:28133545-28133564 | MS.gene96776:CDS | 50.0% |
| ! | TTTTCTGCCTTCGTAGCCTC+CGG | + | chr4.3:28133615-28133634 | None:intergenic | 50.0% |
| !! | ACCTCGCTGAAAAGTGCTCT+GGG | - | chr4.3:28133748-28133767 | MS.gene96776:intron | 50.0% |
| !! | ATGGATTGGGACGAGACACT+GGG | - | chr4.3:28133466-28133485 | MS.gene96776:CDS | 50.0% |
| !! | CGGATTTGGGGTTTTCCGAT+GGG | + | chr4.3:28132113-28132132 | None:intergenic | 50.0% |
| !! | CGTCGTTCAAAAGTGCTCTC+AGG | - | chr4.3:28135045-28135064 | MS.gene96776:CDS | 50.0% |
| !! | CTCCTTTTCGGCTTGCTTTG+AGG | + | chr4.3:28133583-28133602 | None:intergenic | 50.0% |
| !! | GGCTTCTTGTTGATTCTCGG+CGG | + | chr4.3:28132484-28132503 | None:intergenic | 50.0% |
| !! | TCGGATTTGGGGTTTTCCGA+TGG | + | chr4.3:28132114-28132133 | None:intergenic | 50.0% |
| !! | TCTCTTGGTAACGAGCAGTG+AGG | - | chr4.3:28134473-28134492 | MS.gene96776:intron | 50.0% |
| !! | TTCTTGTTGATTCTCGGCGG+CGG | + | chr4.3:28132481-28132500 | None:intergenic | 50.0% |
| !! | TTGGGGTTTTCCGATGGGTT+CGG | + | chr4.3:28132108-28132127 | None:intergenic | 50.0% |
| AAAGAGGAGGAGGGGGATTG+CGG | - | chr4.3:28133636-28133655 | MS.gene96776:CDS | 55.0% | |
| AAGGTCCGGGGTTCAAATCC+CGG | - | chr4.3:28133277-28133296 | MS.gene96776:intron | 55.0% | |
| ACTCCAACTCACGGTCACTG+CGG | + | chr4.3:28133542-28133561 | None:intergenic | 55.0% | |
| AGACGGTTGCAGAGACACCT+TGG | - | chr4.3:28133680-28133699 | MS.gene96776:CDS | 55.0% | |
| AGGAGGAAGAAGGTGAGTGC+GGG | - | chr4.3:28134933-28134952 | MS.gene96776:CDS | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr4.3:28133232-28133251 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr4.3:28133229-28133248 | MS.gene96776:intron | 55.0% | |
| CGAAAAGGAGCAACCAGCTC+CGG | - | chr4.3:28133593-28133612 | MS.gene96776:CDS | 55.0% | |
| GAAAGCAGAAGGCGAAGAGG+AGG | - | chr4.3:28134916-28134935 | MS.gene96776:CDS | 55.0% | |
| GAAGGCGAAGAGGAGGAAGA+AGG | - | chr4.3:28134923-28134942 | MS.gene96776:CDS | 55.0% | |
| GAGGAGGAAGAAGGTGAGTG+CGG | - | chr4.3:28134932-28134951 | MS.gene96776:CDS | 55.0% | |
| GCAGAGACACCTTCGTCGAT+TGG | - | chr4.3:28134984-28135003 | MS.gene96776:CDS | 55.0% | |
| GCAGTTCTCCCAATCGACGA+AGG | + | chr4.3:28134996-28135015 | None:intergenic | 55.0% | |
| GCCCTCAAAGCAAGCCGAAA+AGG | - | chr4.3:28133578-28133597 | MS.gene96776:CDS | 55.0% | |
| GCGCTTCTCGGTCTTGATGA+TGG | + | chr4.3:28133826-28133845 | None:intergenic | 55.0% | |
| GTGCTTCTCAGCCATGAGGA+TGG | + | chr4.3:28135122-28135141 | None:intergenic | 55.0% | |
| TCCGAAAGCAGAAGGCGAAG+AGG | - | chr4.3:28134913-28134932 | MS.gene96776:CDS | 55.0% | |
| TTCATCTTCCTCGCCTTCGG+CGG | + | chr4.3:28132199-28132218 | None:intergenic | 55.0% | |
| TTGCTCGCGTACTGGACTTC+TGG | + | chr4.3:28134609-28134628 | None:intergenic | 55.0% | |
| TTGCTCTTCGACGCGCTTCT+CGG | + | chr4.3:28133838-28133857 | None:intergenic | 55.0% | |
| ! | AGAACAAGCCGCCATCGACT+TGG | - | chr4.3:28135147-28135166 | MS.gene96776:CDS | 55.0% |
| ! | AGACTCCGGTGGTGGTTGAT+TGG | + | chr4.3:28132160-28132179 | None:intergenic | 55.0% |
| ! | CGACCGTGAGTTGGAGTCTA+AGG | - | chr4.3:28134802-28134821 | MS.gene96776:CDS | 55.0% |
| ! | CGGAGCTGGTTGCTCCTTTT+CGG | + | chr4.3:28133595-28133614 | None:intergenic | 55.0% |
| ! | CGTCGATTGGGAGAACTGCA+TGG | - | chr4.3:28134997-28135016 | MS.gene96776:CDS | 55.0% |
| ! | GACTCCGGTGGTGGTTGATT+GGG | + | chr4.3:28132159-28132178 | None:intergenic | 55.0% |
| ! | GGAGAAGCATGCTGAAGAGC+AGG | - | chr4.3:28132413-28132432 | MS.gene96776:CDS | 55.0% |
| ! | GGTGGTGGTTGATTGGGAAG+AGG | + | chr4.3:28132153-28132172 | None:intergenic | 55.0% |
| !! | CCTCGCTGAAAAGTGCTCTG+GGG | - | chr4.3:28133749-28133768 | MS.gene96776:intron | 55.0% |
| !! | GACCTCGCTGAAAAGTGCTC+TGG | - | chr4.3:28133747-28133766 | MS.gene96776:intron | 55.0% |
| !! | GATGGATTGGGACGAGACAC+TGG | - | chr4.3:28133465-28133484 | MS.gene96776:CDS | 55.0% |
| !! | GTTTCTGGTTCGGGAGACTC+CGG | + | chr4.3:28132174-28132193 | None:intergenic | 55.0% |
| AAAGGAGCAACCAGCTCCGG+AGG | - | chr4.3:28133596-28133615 | MS.gene96776:CDS | 60.0% | |
| AAGAGGAGGAGGGGGATTGC+GGG | - | chr4.3:28133637-28133656 | MS.gene96776:CDS | 60.0% | |
| GAACCGCAGTGACCGTGAGT+TGG | - | chr4.3:28133536-28133555 | MS.gene96776:CDS | 60.0% | |
| TCCTGATCAAGCAGCTGCGG+AGG | - | chr4.3:28134889-28134908 | MS.gene96776:CDS | 60.0% | |
| !! | CCCCAGAGCACTTTTCAGCG+AGG | + | chr4.3:28133752-28133771 | None:intergenic | 60.0% |
| !! | GGGTTTTCCGATGGGTTCGG+CGG | + | chr4.3:28132105-28132124 | None:intergenic | 60.0% |
| !! | TTCGGCGGCGGTTTCTGGTT+CGG | + | chr4.3:28132184-28132203 | None:intergenic | 60.0% |
| !! | TTGTTGATTCTCGGCGGCGG+CGG | + | chr4.3:28132478-28132497 | None:intergenic | 60.0% |
| ACCAGCTCCGGAGGCTACGA+AGG | - | chr4.3:28133605-28133624 | MS.gene96776:CDS | 65.0% | |
| ATCTTCCTCGCCTTCGGCGG+CGG | + | chr4.3:28132196-28132215 | None:intergenic | 65.0% | |
| GAACCAGAAACCGCCGCCGA+AGG | - | chr4.3:28132183-28132202 | MS.gene96776:CDS | 65.0% | |
| GCCTCCGCAGCTGCTTGATC+AGG | + | chr4.3:28134893-28134912 | None:intergenic | 65.0% | |
| GCGGAGGCTCCGAAAGCAGA+AGG | - | chr4.3:28134905-28134924 | MS.gene96776:CDS | 65.0% | |
| GGACTGCAGCGACCGTGAGT+TGG | - | chr4.3:28134793-28134812 | MS.gene96776:CDS | 65.0% | |
| GGTGGCCGGGATTTGAACCC+CGG | + | chr4.3:28133285-28133304 | None:intergenic | 65.0% | |
| !! | TCGGCGGCGGTTTCTGGTTC+GGG | + | chr4.3:28132183-28132202 | None:intergenic | 65.0% |
| !! | TCTGGTTCGGGAGACTCCGG+TGG | + | chr4.3:28132171-28132190 | None:intergenic | 65.0% |
| AGAAACCGCCGCCGAAGGCG+AGG | - | chr4.3:28132188-28132207 | MS.gene96776:CDS | 70.0% | |
| GCCTTCGTAGCCTCCGGAGC+TGG | + | chr4.3:28133609-28133628 | None:intergenic | 70.0% | |
| GGTTCGGGAGACTCCGGTGG+TGG | + | chr4.3:28132168-28132187 | None:intergenic | 70.0% | |
| GTCGACGCCGCCGAACCCAT+CGG | - | chr4.3:28132095-28132114 | MS.gene96776:CDS | 70.0% | |
| TCGCCTTCGGCGGCGGTTTC+TGG | + | chr4.3:28132189-28132208 | None:intergenic | 70.0% | |
| TTGATTCTCGGCGGCGGCGG+CGG | + | chr4.3:28132475-28132494 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 28132093 | 28135207 | 28132093 | ID=MS.gene96776 |
| chr4.3 | mRNA | 28132093 | 28135207 | 28132093 | ID=MS.gene96776.t1;Parent=MS.gene96776 |
| chr4.3 | exon | 28134783 | 28135207 | 28134783 | ID=MS.gene96776.t1.exon1;Parent=MS.gene96776.t1 |
| chr4.3 | CDS | 28134783 | 28135207 | 28134783 | ID=cds.MS.gene96776.t1;Parent=MS.gene96776.t1 |
| chr4.3 | exon | 28133420 | 28133755 | 28133420 | ID=MS.gene96776.t1.exon2;Parent=MS.gene96776.t1 |
| chr4.3 | CDS | 28133420 | 28133755 | 28133420 | ID=cds.MS.gene96776.t1;Parent=MS.gene96776.t1 |
| chr4.3 | exon | 28132093 | 28132498 | 28132093 | ID=MS.gene96776.t1.exon3;Parent=MS.gene96776.t1 |
| chr4.3 | CDS | 28132093 | 28132498 | 28132093 | ID=cds.MS.gene96776.t1;Parent=MS.gene96776.t1 |
| Gene Sequence |
| Protein sequence |
