Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97309.t1 | AAT45084.1 | 99.3 | 451 | 3 | 0 | 248 | 698 | 40 | 490 | 3.90E-257 | 897.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97309.t1 | Q6NKX1 | 57.1 | 462 | 185 | 5 | 247 | 696 | 15 | 475 | 1.6e-150 | 534.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97309.t1 | Q6JA03 | 99.3 | 451 | 3 | 0 | 248 | 698 | 40 | 490 | 2.8e-257 | 897.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61281 | MS.gene97309 | PPI |
| MS.gene00318 | MS.gene97309 | PPI |
| MS.gene97309 | MS.gene036485 | PPI |
| MS.gene97309 | MS.gene71995 | PPI |
| MS.gene72354 | MS.gene97309 | PPI |
| MS.gene011574 | MS.gene97309 | PPI |
| MS.gene004578 | MS.gene97309 | PPI |
| MS.gene041559 | MS.gene97309 | PPI |
| MS.gene97309 | MS.gene035333 | PPI |
| MS.gene073368 | MS.gene97309 | PPI |
| MS.gene52423 | MS.gene97309 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97309.t1 | MTR_7g020820 | 96.018 | 452 | 18 | 0 | 248 | 699 | 40 | 491 | 0.0 | 911 |
| MS.gene97309.t1 | MTR_6g016640 | 77.931 | 435 | 95 | 1 | 265 | 699 | 56 | 489 | 0.0 | 729 |
| MS.gene97309.t1 | MTR_6g016635 | 77.931 | 435 | 95 | 1 | 265 | 699 | 56 | 489 | 0.0 | 729 |
| MS.gene97309.t1 | MTR_6g016650 | 77.701 | 435 | 96 | 1 | 265 | 699 | 56 | 489 | 0.0 | 726 |
| MS.gene97309.t1 | MTR_7g020800 | 97.551 | 245 | 6 | 0 | 5 | 249 | 1 | 245 | 3.96e-174 | 498 |
| MS.gene97309.t1 | MTR_6g016655 | 85.714 | 245 | 31 | 2 | 5 | 249 | 1 | 241 | 1.51e-147 | 430 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97309.t1 | AT5G38710 | 57.143 | 462 | 185 | 5 | 247 | 696 | 15 | 475 | 0.0 | 544 |
| MS.gene97309.t1 | AT5G38710 | 56.733 | 453 | 183 | 5 | 247 | 687 | 15 | 466 | 0.0 | 532 |
| MS.gene97309.t1 | AT3G30775 | 60.412 | 437 | 169 | 4 | 265 | 698 | 63 | 498 | 2.28e-178 | 518 |
| MS.gene97309.t1 | AT3G30775 | 60.412 | 437 | 169 | 4 | 265 | 698 | 63 | 498 | 2.28e-178 | 518 |
| MS.gene97309.t1 | AT3G59500 | 80.567 | 247 | 40 | 2 | 5 | 249 | 1 | 241 | 5.63e-141 | 413 |
| MS.gene97309.t1 | AT3G59500 | 80.567 | 247 | 40 | 2 | 5 | 249 | 1 | 241 | 5.63e-141 | 413 |
| MS.gene97309.t1 | AT1G30890 | 79.592 | 245 | 46 | 1 | 5 | 249 | 1 | 241 | 1.75e-138 | 407 |
| MS.gene97309.t1 | AT1G30890 | 79.592 | 245 | 46 | 1 | 5 | 249 | 1 | 241 | 1.75e-138 | 407 |
Find 173 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTTCTTCTGCAGTTAA+TGG | 0.184815 | 7.3:+78728767 | None:intergenic |
| GCAAGCCAATATTCCATTAT+TGG | 0.192056 | 7.3:-78728693 | MS.gene97309:CDS |
| TCCAATTCATAACACTATTA+AGG | 0.221251 | 7.3:-78728420 | MS.gene97309:CDS |
| ATCAAAGGCTGCTGAGAAAA+TGG | 0.229693 | 7.3:-78728525 | MS.gene97309:CDS |
| AAGAAAATTGGCTGCTGATT+TGG | 0.237034 | 7.3:-78728453 | MS.gene97309:CDS |
| GCATTCAATGCTGCCGGTTC+TGG | 0.239639 | 7.3:-78738319 | MS.gene97309:CDS |
| GGCATGTCTTTGGCTGTTCT+TGG | 0.258756 | 7.3:-78734717 | MS.gene97309:CDS |
| GGGGCATTTATGTCATAAAT+TGG | 0.280086 | 7.3:+78737252 | None:intergenic |
| CTATGTTAAGAACAAGTTAA+AGG | 0.293182 | 7.3:-78737463 | MS.gene97309:CDS |
| ATGTCTGAGGCACTATCTTT+TGG | 0.299162 | 7.3:-78728122 | MS.gene97309:CDS |
| ATGGAATTTGCACAACTATA+TGG | 0.300041 | 7.3:-78728146 | MS.gene97309:CDS |
| AATAACCAGTTTAATGCTTC+AGG | 0.308938 | 7.3:+78734861 | None:intergenic |
| ATCAACCAATAATGGAATAT+TGG | 0.323034 | 7.3:+78728688 | None:intergenic |
| AACTCCTGACTTCGGCAAAA+AGG | 0.323609 | 7.3:+78734604 | None:intergenic |
| GGCAGTTGATTTGAGAAGTT+TGG | 0.328394 | 7.3:+78729865 | None:intergenic |
| GTTCACTTGGAAGTAGTATT+GGG | 0.331374 | 7.3:+78737491 | None:intergenic |
| AGCTCACAACCTAATGTGTT+TGG | 0.336218 | 7.3:-78738346 | MS.gene97309:CDS |
| GGTACCTATGTTGTACTTGC+TGG | 0.341183 | 7.3:-78737201 | MS.gene97309:CDS |
| TACATTCCATTGATGGCATT+TGG | 0.342285 | 7.3:-78737222 | MS.gene97309:CDS |
| TGCTCAGCATCAACCAATAA+TGG | 0.345577 | 7.3:+78728680 | None:intergenic |
| AGAAAATTGGCTGCTGATTT+GGG | 0.348106 | 7.3:-78728452 | MS.gene97309:CDS |
| GGACTTGACTCAGAGAAAAT+TGG | 0.349772 | 7.3:+78728818 | None:intergenic |
| TAACAATGTCAGGCCACAAC+TGG | 0.356484 | 7.3:-78738401 | MS.gene97309:CDS |
| GTTGTGCAAATTCCATCTTA+TGG | 0.359595 | 7.3:+78728153 | None:intergenic |
| AATGCATTCCCAAACACATT+AGG | 0.362180 | 7.3:+78738337 | None:intergenic |
| TATGTCTAGTGAAAGAAAAT+TGG | 0.367109 | 7.3:-78728465 | MS.gene97309:CDS |
| ATGGGATTTAAGTTGGTTAG+AGG | 0.368900 | 7.3:-78728494 | MS.gene97309:CDS |
| GGTGAAAACCCTATTGTGTT+TGG | 0.368909 | 7.3:-78728596 | MS.gene97309:CDS |
| TCCTTAATAGTGTTATGAAT+TGG | 0.371148 | 7.3:+78728419 | None:intergenic |
| TGAATGGTTCCAAACACAAT+AGG | 0.377372 | 7.3:+78728587 | None:intergenic |
| ATCAATGGAATGTACAGGTC+AGG | 0.381717 | 7.3:+78737231 | None:intergenic |
| AACCAGCATTCCACGTAAAC+CGG | 0.387024 | 7.3:+78729652 | None:intergenic |
| TGGACTCATTCGAGGTGGAT+TGG | 0.390858 | 7.3:-78738299 | MS.gene97309:CDS |
| TGCTTACCCGGTGCAGGAAT+GGG | 0.398130 | 7.3:+78737430 | None:intergenic |
| GGCATTTCACTTGGTCTTCG+TGG | 0.398166 | 7.3:-78737180 | MS.gene97309:CDS |
| TTTCTAATGTTCAGGGTCAT+TGG | 0.399228 | 7.3:-78737320 | MS.gene97309:intron |
| CGTTCACTTGGAAGTAGTAT+TGG | 0.402454 | 7.3:+78737490 | None:intergenic |
| GGACTCATTCGAGGTGGATT+GGG | 0.405789 | 7.3:-78738298 | MS.gene97309:CDS |
| CTGCTTACCCGGTGCAGGAA+TGG | 0.410974 | 7.3:+78737429 | None:intergenic |
| TCTTCTGCAGTTAATGGCTC+TGG | 0.411211 | 7.3:+78728773 | None:intergenic |
| AAAGTGACATTGCTTTCATT+AGG | 0.416985 | 7.3:-78734795 | MS.gene97309:CDS |
| TTAGTCCTGAAGCATTAAAC+TGG | 0.419593 | 7.3:-78734866 | MS.gene97309:CDS |
| TGACCTGTACATTCCATTGA+TGG | 0.420567 | 7.3:-78737229 | MS.gene97309:CDS |
| TTACGTGGAATGCTGGTTTA+CGG | 0.420959 | 7.3:-78729647 | MS.gene97309:CDS |
| GCAACTCATAACATTGAATC+AGG | 0.421031 | 7.3:-78728320 | MS.gene97309:intron |
| GTTAGCAAGTATATGCCATT+TGG | 0.425364 | 7.3:-78728077 | MS.gene97309:CDS |
| CGAGGTGGATTGGGTGCATA+TGG | 0.428761 | 7.3:-78738289 | MS.gene97309:CDS |
| ATTTGAGAAGTTTGGTGGTT+GGG | 0.430666 | 7.3:+78729873 | None:intergenic |
| TCAAAGGCTGCTGAGAAAAT+GGG | 0.431171 | 7.3:-78728524 | MS.gene97309:CDS |
| AGAGGAGTGTTGGCTGCATC+AGG | 0.432114 | 7.3:-78728005 | MS.gene97309:CDS |
| ATTAAACTGGTTATTCATCA+AGG | 0.432372 | 7.3:-78734853 | MS.gene97309:CDS |
| CACATTTCTGACAAAGTTCA+AGG | 0.432481 | 7.3:+78728717 | None:intergenic |
| GAATGGTTCCAAACACAATA+GGG | 0.432754 | 7.3:+78728588 | None:intergenic |
| GATACCAATGGGATTTAAGT+TGG | 0.434398 | 7.3:-78728501 | MS.gene97309:CDS |
| ATTCTTTCTAGCAAACTCAT+TGG | 0.435303 | 7.3:+78728908 | None:intergenic |
| GTACTTGCTGGCATTTCACT+TGG | 0.439185 | 7.3:-78737189 | MS.gene97309:CDS |
| ATGCTTGAGAAGATTGCTAA+TGG | 0.443947 | 7.3:-78728362 | MS.gene97309:CDS |
| GCTCGGCGTCGGGAGGGAGG+AGG | 0.454095 | 7.3:+78729933 | None:intergenic |
| TGGAAGTTGAGCTCGGCGTC+GGG | 0.460863 | 7.3:+78729923 | None:intergenic |
| GGCAATGAATCTTGCTTCCA+TGG | 0.463585 | 7.3:+78728839 | None:intergenic |
| GCTCACAACCTAATGTGTTT+GGG | 0.467004 | 7.3:-78738345 | MS.gene97309:CDS |
| ACATTAGGTTGTGAGCTTGT+TGG | 0.468307 | 7.3:+78738352 | None:intergenic |
| ACCTCGAATGAGTCCAGAAC+CGG | 0.468362 | 7.3:+78738306 | None:intergenic |
| GAGAATGTTGTTGGCATCAA+AGG | 0.469497 | 7.3:-78728540 | MS.gene97309:CDS |
| TGAGAATGTATAACAATGTC+AGG | 0.471616 | 7.3:-78738411 | MS.gene97309:CDS |
| AAGTGGAGAAGCACCACTAT+TGG | 0.474140 | 7.3:-78734772 | MS.gene97309:CDS |
| TTGGACATCGTAGCATATGC+AGG | 0.474539 | 7.3:-78734753 | MS.gene97309:CDS |
| GCTGCAAAAGCACATGAACT+AGG | 0.475823 | 7.3:-78728191 | MS.gene97309:CDS |
| AGGAGGGTTGTTGTCGATGA+TGG | 0.476808 | 7.3:+78729950 | None:intergenic |
| ACAGATAACTAGGTATTTCT+CGG | 0.479440 | 7.3:-78737517 | MS.gene97309:intron |
| AGCCGGTTTACGTGGAATGC+TGG | 0.481169 | 7.3:-78729654 | MS.gene97309:CDS |
| TGCTAAGGAGAGAATGTTGT+TGG | 0.483046 | 7.3:-78728549 | MS.gene97309:CDS |
| GACTTATTTGAAAGATGCTA+AGG | 0.483282 | 7.3:-78728564 | MS.gene97309:CDS |
| GCCGGTTCTGGACTCATTCG+AGG | 0.486086 | 7.3:-78738307 | MS.gene97309:CDS |
| GTGGAAGTTGAGCTCGGCGT+CGG | 0.486254 | 7.3:+78729922 | None:intergenic |
| GAGAAAATGGGGATACCAAT+GGG | 0.487127 | 7.3:-78728512 | MS.gene97309:CDS |
| TGGCTGCATCAGGCTTTGAC+AGG | 0.489064 | 7.3:-78727995 | MS.gene97309:CDS |
| TTCCATGGTAAAACAAAAGA+AGG | 0.490451 | 7.3:+78728854 | None:intergenic |
| TAGGTACCAAATGCCATCAA+TGG | 0.490484 | 7.3:+78737216 | None:intergenic |
| ATCTTTCAAATAAGTCTGAA+TGG | 0.490946 | 7.3:+78728571 | None:intergenic |
| CTCTTCCTTGTGTGGTACAA+AGG | 0.492054 | 7.3:+78728797 | None:intergenic |
| TAAGAGAGTCTACCTCCTAC+TGG | 0.494464 | 7.3:+78737282 | None:intergenic |
| CAATGGTTGACCTCGGTACA+TGG | 0.496298 | 7.3:-78729817 | MS.gene97309:CDS |
| CTCGGCGTCGGGAGGGAGGA+GGG | 0.497150 | 7.3:+78729934 | None:intergenic |
| AAAGAAGAGATTACCGAAGA+TGG | 0.501243 | 7.3:+78729539 | None:intergenic |
| CCATGGCATCAAAACGTAGT+AGG | 0.501741 | 7.3:+78734674 | None:intergenic |
| TGCTACCGCGGTCGAGCCAA+TGG | 0.505880 | 7.3:-78729834 | MS.gene97309:CDS |
| TATGGCATAACAGTCTCAAC+AGG | 0.506555 | 7.3:+78728053 | None:intergenic |
| ACAGTCTCAACAGGACCAAA+TGG | 0.507610 | 7.3:+78728062 | None:intergenic |
| CAGATCGCTTCCTCCATCTT+CGG | 0.508348 | 7.3:-78729552 | MS.gene97309:intron |
| AGAAGGGCTGAGGAGAATAG+AGG | 0.509588 | 7.3:-78728023 | MS.gene97309:CDS |
| AAAGCACATGAACTAGGGAT+TGG | 0.513504 | 7.3:-78728185 | MS.gene97309:CDS |
| TCCTTTACGTAACATTGCTA+TGG | 0.513932 | 7.3:-78729762 | MS.gene97309:CDS |
| TAAGTAAAGTAATCAATAGC+AGG | 0.514940 | 7.3:+78728644 | None:intergenic |
| CTGGTTATTCATCAAGGGAA+TGG | 0.515001 | 7.3:-78734847 | MS.gene97309:CDS |
| GTAACAGGAAGGAGTTGGTC+AGG | 0.515317 | 7.3:-78727874 | MS.gene97309:intron |
| TAACATAGTGGTCGTTCACT+TGG | 0.517113 | 7.3:+78737478 | None:intergenic |
| ACATTGCTTTCATTAGGAAG+TGG | 0.517128 | 7.3:-78734789 | MS.gene97309:CDS |
| GGGAATGCATTCAATGCTGC+CGG | 0.518752 | 7.3:-78738325 | MS.gene97309:CDS |
| TGTGAGCTTGTTGGAAGTTG+AGG | 0.518984 | 7.3:+78738361 | None:intergenic |
| TGGAAAGGTGAACCATAAGA+TGG | 0.519633 | 7.3:-78728165 | MS.gene97309:CDS |
| TCATCAAGGGAATGGTTGGT+TGG | 0.519640 | 7.3:-78734839 | MS.gene97309:CDS |
| AGTTGAGCTCGGCGTCGGGA+GGG | 0.523522 | 7.3:+78729927 | None:intergenic |
| GAGAAGATTGCTAATGGTCC+TGG | 0.526190 | 7.3:-78728356 | MS.gene97309:CDS |
| TTATTCATCAAGGGAATGGT+TGG | 0.526967 | 7.3:-78734843 | MS.gene97309:CDS |
| GACGTCGTGGAAGTTGAGCT+CGG | 0.528359 | 7.3:+78729916 | None:intergenic |
| TTGAATGAAGCCGGTTTACG+TGG | 0.536980 | 7.3:-78729662 | MS.gene97309:CDS |
| AACAATGTCAGGCCACAACT+GGG | 0.538188 | 7.3:-78738400 | MS.gene97309:CDS |
| CATTACTGCTTACCCGGTGC+AGG | 0.540569 | 7.3:+78737424 | None:intergenic |
| TTAACTTGTTCTTAACATAG+TGG | 0.541650 | 7.3:+78737466 | None:intergenic |
| AAGTTGAGCTCGGCGTCGGG+AGG | 0.544511 | 7.3:+78729926 | None:intergenic |
| TGAGCTCGGCGTCGGGAGGG+AGG | 0.546223 | 7.3:+78729930 | None:intergenic |
| TGAGGAGAATAGAGGAGTGT+TGG | 0.546299 | 7.3:-78728015 | MS.gene97309:CDS |
| TTGGCTCGACCGCGGTAGCA+TGG | 0.546822 | 7.3:+78729837 | None:intergenic |
| AGTTGATTTGAGAAGTTTGG+TGG | 0.547853 | 7.3:+78729868 | None:intergenic |
| ATGCCATCAATGGAATGTAC+AGG | 0.551498 | 7.3:+78737226 | None:intergenic |
| AGCGGTGATAGCATCTTCTC+CGG | 0.551973 | 7.3:+78729703 | None:intergenic |
| TCAGCCCTTCTCAAGAGGTA+TGG | 0.555676 | 7.3:+78728035 | None:intergenic |
| TTTGTTCCCATTCCTGCACC+GGG | 0.555837 | 7.3:-78737436 | MS.gene97309:intron |
| CTAACCAACTTAAATCCCAT+TGG | 0.556156 | 7.3:+78728497 | None:intergenic |
| GGCTGTGATCGCAATCTCAA+AGG | 0.556621 | 7.3:-78729599 | MS.gene97309:CDS |
| TTAAACTGGTTATTCATCAA+GGG | 0.556823 | 7.3:-78734852 | MS.gene97309:CDS |
| GCCATAGCAATGTTACGTAA+AGG | 0.557815 | 7.3:+78729761 | None:intergenic |
| GGAGAAGATGCTATCACCGC+TGG | 0.558734 | 7.3:-78729701 | MS.gene97309:CDS |
| GAATGAGTGATTTGCTGAGA+TGG | 0.558930 | 7.3:-78728889 | MS.gene97309:CDS |
| CTGCAAAAGCACATGAACTA+GGG | 0.560327 | 7.3:-78728190 | MS.gene97309:CDS |
| TGAGAAAATGGGGATACCAA+TGG | 0.562625 | 7.3:-78728513 | MS.gene97309:CDS |
| ACCTCGGTACATGGATGTTG+AGG | 0.563108 | 7.3:-78729808 | MS.gene97309:CDS |
| TTTGCTGAGATGGCAGAAGA+AGG | 0.565938 | 7.3:-78728879 | MS.gene97309:CDS |
| ATACCTCTTGAGAAGGGCTG+AGG | 0.568530 | 7.3:-78728033 | MS.gene97309:CDS |
| ATTGCCGGGTTGAATGAAGC+CGG | 0.569365 | 7.3:-78729671 | MS.gene97309:CDS |
| TCAATGGAATGTACAGGTCA+GGG | 0.574587 | 7.3:+78737232 | None:intergenic |
| TTATGCCATACCTCTTGAGA+AGG | 0.578455 | 7.3:-78728040 | MS.gene97309:CDS |
| TCTCCTCAGCCCTTCTCAAG+AGG | 0.589935 | 7.3:+78728030 | None:intergenic |
| CAATGTCAGGCCACAACTGG+GGG | 0.592342 | 7.3:-78738398 | MS.gene97309:CDS |
| GATTTGAGAAGTTTGGTGGT+TGG | 0.596318 | 7.3:+78729872 | None:intergenic |
| GCATTTATGTCATAAATTGG+AGG | 0.596489 | 7.3:+78737255 | None:intergenic |
| TGTGTGTAACAGGAAGGAGT+TGG | 0.596944 | 7.3:-78727879 | MS.gene97309:intron |
| CAAAGGCTGCTGAGAAAATG+GGG | 0.601355 | 7.3:-78728523 | MS.gene97309:CDS |
| AGGGTTGTTGTCGATGATGG+CGG | 0.601939 | 7.3:+78729953 | None:intergenic |
| CAAGTCCTTTGTACCACACA+AGG | 0.602699 | 7.3:-78728802 | MS.gene97309:CDS |
| CATGTACCGAGGTCAACCAT+TGG | 0.607494 | 7.3:+78729818 | None:intergenic |
| GCCATGCATAAGCAGAACCA+TGG | 0.608918 | 7.3:+78734657 | None:intergenic |
| GACCGCGGTAGCATGGAGGA+TGG | 0.611857 | 7.3:+78729844 | None:intergenic |
| GCTCTGGTCTCTTCCTTGTG+TGG | 0.615022 | 7.3:+78728789 | None:intergenic |
| TGCCATCCTCCATGCTACCG+CGG | 0.616863 | 7.3:-78729846 | MS.gene97309:CDS |
| AATGCCAGCAAGTACAACAT+AGG | 0.617102 | 7.3:+78737197 | None:intergenic |
| CGAGTCATAACTCCTGACTT+CGG | 0.621337 | 7.3:+78734596 | None:intergenic |
| TTCACTTGGAAGTAGTATTG+GGG | 0.628559 | 7.3:+78737492 | None:intergenic |
| AAGCGATCTGCTGACATCAA+CGG | 0.628709 | 7.3:+78729565 | None:intergenic |
| TATGCTACGATGTCCAATAG+TGG | 0.630622 | 7.3:+78734759 | None:intergenic |
| GAAGAGATTACCGAAGATGG+AGG | 0.632295 | 7.3:+78729542 | None:intergenic |
| GTCGAGCCAATGGTTGACCT+CGG | 0.632405 | 7.3:-78729824 | MS.gene97309:CDS |
| GTCAACCATTGGCTCGACCG+CGG | 0.635474 | 7.3:+78729829 | None:intergenic |
| GCCATGGTTCTGCTTATGCA+TGG | 0.637020 | 7.3:-78734658 | MS.gene97309:CDS |
| GCTTTGACAGGCAACTGATG+AGG | 0.640989 | 7.3:-78727983 | MS.gene97309:intron |
| TGGACATCGTAGCATATGCA+GGG | 0.643164 | 7.3:-78734752 | MS.gene97309:CDS |
| GGTTCTGGACTCATTCGAGG+TGG | 0.643394 | 7.3:-78738304 | MS.gene97309:CDS |
| ACAATGTCAGGCCACAACTG+GGG | 0.647290 | 7.3:-78738399 | MS.gene97309:CDS |
| GGAAGTTGAGGCTGAAACTG+AGG | 0.650619 | 7.3:+78738373 | None:intergenic |
| TATGCCATACCTCTTGAGAA+GGG | 0.652837 | 7.3:-78728039 | MS.gene97309:CDS |
| TCTGCTATTATGCATAACAA+AGG | 0.660959 | 7.3:-78728617 | MS.gene97309:CDS |
| CAATGGAATGTACAGGTCAG+GGG | 0.668289 | 7.3:+78737233 | None:intergenic |
| ACATGAACTAGGGATTGGAA+AGG | 0.669284 | 7.3:-78728180 | MS.gene97309:CDS |
| GAAGATGCTCATGATAACGC+TGG | 0.669461 | 7.3:-78729620 | MS.gene97309:CDS |
| AAGATTGCTAATGGTCCTGG+TGG | 0.669644 | 7.3:-78728353 | MS.gene97309:CDS |
| AGAATCACTGAACCAGTAGG+AGG | 0.671395 | 7.3:-78737294 | MS.gene97309:CDS |
| ACTAGAATCACTGAACCAGT+AGG | 0.677856 | 7.3:-78737297 | MS.gene97309:CDS |
| GTTGCAAGAACAACTCCACC+AGG | 0.681012 | 7.3:+78728338 | None:intergenic |
| ACAACTATATGGAATGTCTG+AGG | 0.702468 | 7.3:-78728135 | MS.gene97309:CDS |
| GCTCGACCGCGGTAGCATGG+AGG | 0.710481 | 7.3:+78729840 | None:intergenic |
| ACCTCAACATCCATGTACCG+AGG | 0.713651 | 7.3:+78729807 | None:intergenic |
| TAAACCGGCTTCATTCAACC+CGG | 0.724383 | 7.3:+78729667 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 78727850 | 78738440 | 78727850 | ID=MS.gene97309 |
| chr7.3 | mRNA | 78727850 | 78738440 | 78727850 | ID=MS.gene97309.t1;Parent=MS.gene97309 |
| chr7.3 | exon | 78738246 | 78738440 | 78738246 | ID=MS.gene97309.t1.exon1;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78738246 | 78738440 | 78738246 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| chr7.3 | exon | 78737437 | 78737535 | 78737437 | ID=MS.gene97309.t1.exon2;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78737437 | 78737535 | 78737437 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| chr7.3 | exon | 78737177 | 78737328 | 78737177 | ID=MS.gene97309.t1.exon3;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78737177 | 78737328 | 78737177 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| chr7.3 | exon | 78734595 | 78734890 | 78734595 | ID=MS.gene97309.t1.exon4;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78734595 | 78734890 | 78734595 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| chr7.3 | exon | 78729553 | 78729983 | 78729553 | ID=MS.gene97309.t1.exon5;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78729553 | 78729983 | 78729553 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| chr7.3 | exon | 78728321 | 78728966 | 78728321 | ID=MS.gene97309.t1.exon6;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78728321 | 78728966 | 78728321 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| chr7.3 | exon | 78727984 | 78728224 | 78727984 | ID=MS.gene97309.t1.exon7;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78727984 | 78728224 | 78727984 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| chr7.3 | exon | 78727850 | 78727889 | 78727850 | ID=MS.gene97309.t1.exon8;Parent=MS.gene97309.t1 |
| chr7.3 | CDS | 78727850 | 78727889 | 78727850 | ID=cds.MS.gene97309.t1;Parent=MS.gene97309.t1 |
| Gene Sequence |
| Protein sequence |
