Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011574.t1 | XP_013457601.1 | 87 | 491 | 11 | 1 | 1 | 438 | 1 | 491 | 2.10E-236 | 828.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011574.t1 | O23596 | 61.1 | 527 | 101 | 3 | 1 | 423 | 1 | 527 | 1.3e-170 | 600.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011574.t1 | A0A072UPK8 | 87.0 | 491 | 11 | 1 | 1 | 438 | 1 | 491 | 1.5e-236 | 828.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011574 | MS.gene95441 | PPI |
| MS.gene34834 | MS.gene011574 | PPI |
| MS.gene71133 | MS.gene011574 | PPI |
| MS.gene011574 | MS.gene018202 | PPI |
| MS.gene37117 | MS.gene011574 | PPI |
| MS.gene011574 | MS.gene022097 | PPI |
| MS.gene011574 | MS.gene025048 | PPI |
| MS.gene011574 | MS.gene43181 | PPI |
| MS.gene011574 | MS.gene97309 | PPI |
| MS.gene043783 | MS.gene011574 | PPI |
| MS.gene78188 | MS.gene011574 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011574.t1 | MTR_4g099450 | 85.800 | 500 | 14 | 2 | 1 | 443 | 1 | 500 | 0.0 | 837 |
| MS.gene011574.t1 | MTR_0004s0650 | 55.441 | 487 | 150 | 5 | 13 | 432 | 21 | 507 | 0.0 | 517 |
| MS.gene011574.t1 | MTR_2g460810 | 52.301 | 478 | 164 | 7 | 11 | 424 | 12 | 489 | 6.02e-157 | 455 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011574.t1 | AT3G47420 | 55.624 | 489 | 144 | 5 | 10 | 425 | 15 | 503 | 2.98e-180 | 516 |
| MS.gene011574.t1 | AT3G47420 | 55.624 | 489 | 144 | 5 | 10 | 425 | 15 | 503 | 2.98e-180 | 516 |
| MS.gene011574.t1 | AT3G47420 | 55.624 | 489 | 144 | 5 | 10 | 425 | 15 | 503 | 2.98e-180 | 516 |
| MS.gene011574.t1 | AT1G30560 | 53.533 | 467 | 159 | 4 | 10 | 418 | 16 | 482 | 2.33e-169 | 488 |
| MS.gene011574.t1 | AT4G25220 | 52.876 | 452 | 166 | 3 | 14 | 418 | 24 | 475 | 1.36e-161 | 468 |
| MS.gene011574.t1 | AT2G13100 | 50.204 | 490 | 181 | 5 | 3 | 429 | 2 | 491 | 5.25e-154 | 448 |
| MS.gene011574.t1 | AT2G13100 | 50.204 | 490 | 181 | 5 | 3 | 429 | 2 | 491 | 5.25e-154 | 448 |
| MS.gene011574.t1 | AT4G17550 | 63.139 | 274 | 61 | 2 | 1 | 234 | 1 | 274 | 1.91e-113 | 346 |
| MS.gene011574.t1 | AT4G17550 | 79.255 | 188 | 39 | 0 | 236 | 423 | 340 | 527 | 1.51e-91 | 289 |
| MS.gene011574.t1 | AT2G13100 | 62.564 | 195 | 72 | 1 | 236 | 429 | 111 | 305 | 9.40e-77 | 243 |
| MS.gene011574.t1 | AT2G13100 | 42.169 | 83 | 40 | 2 | 8 | 82 | 7 | 89 | 3.27e-11 | 64.7 |
| MS.gene011574.t1 | AT2G13100 | 62.564 | 195 | 72 | 1 | 236 | 429 | 145 | 339 | 1.32e-76 | 244 |
Find 126 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAGTTTGGAGACACCTTC+TGG | 0.143168 | 8.4:+23570482 | None:intergenic |
| ATTTGATCAAATTAAGAATT+AGG | 0.194856 | 8.4:-23567580 | MS.gene011574:CDS |
| ATAACTGGATTATTCGTAAA+TGG | 0.209687 | 8.4:-23568400 | MS.gene011574:CDS |
| AATGATCGCTGGGTTGTTTC+AGG | 0.225072 | 8.4:-23570273 | MS.gene011574:CDS |
| TCTTCTTGCTGCTAGTGTTT+TGG | 0.231139 | 8.4:-23570135 | MS.gene011574:CDS |
| GCTATTGGACCTCTTCTTAC+AGG | 0.234552 | 8.4:-23568253 | MS.gene011574:CDS |
| TTTGGAATGTTCATGAGTTT+TGG | 0.239771 | 8.4:-23570313 | MS.gene011574:CDS |
| GTTTCGTATTAATTTGATTC+CGG | 0.248320 | 8.4:+23570658 | None:intergenic |
| GAGGTTTGATAATGGGTATT+TGG | 0.258669 | 8.4:-23570193 | MS.gene011574:CDS |
| CCTTCCGTCGTCGCGGTTAT+CGG | 0.264013 | 8.4:-23570239 | MS.gene011574:CDS |
| ATTGGACTTATGTTCATAAC+TGG | 0.265382 | 8.4:-23568415 | MS.gene011574:CDS |
| GGAAGCAGAGGCAGCGAATA+AGG | 0.277456 | 8.4:+23567633 | None:intergenic |
| TGCCAAAAGCAAACCTTCTC+TGG | 0.288833 | 8.4:+23567688 | None:intergenic |
| TCGTCGCGGTTATCGGTAAC+TGG | 0.310547 | 8.4:-23570232 | MS.gene011574:CDS |
| TTTCGTATTAATTTGATTCC+GGG | 0.327005 | 8.4:+23570659 | None:intergenic |
| TAAGATGAAGATTGCATTCA+AGG | 0.335958 | 8.4:+23567612 | None:intergenic |
| TTTCTTGCATGTTACTCTAT+TGG | 0.336252 | 8.4:-23570443 | MS.gene011574:CDS |
| GGATCAGTTGGTGCAGCTAT+TGG | 0.349556 | 8.4:-23568268 | MS.gene011574:CDS |
| TACATCGATTTCTCCGAGTT+TGG | 0.354592 | 8.4:+23570469 | None:intergenic |
| TCTATTGGCATGTACGTTGC+AGG | 0.357194 | 8.4:-23570428 | MS.gene011574:CDS |
| GCCGAAATTGCGGAGAAAAC+TGG | 0.367269 | 8.4:-23568139 | MS.gene011574:CDS |
| CTTGGTGGGTTGATTATGTT+TGG | 0.371888 | 8.4:-23570083 | MS.gene011574:CDS |
| CTGCTTATCCTGAGGATGTT+GGG | 0.374024 | 8.4:-23570034 | MS.gene011574:CDS |
| TACTGCCGTCTCTGCTGACT+TGG | 0.376926 | 8.4:-23568359 | MS.gene011574:CDS |
| CGCTGGGTTGTTTCAGGCGA+CGG | 0.384440 | 8.4:-23570267 | MS.gene011574:CDS |
| AAGAAAGAGAGGTTTGATAA+TGG | 0.387348 | 8.4:-23570201 | MS.gene011574:CDS |
| ACTTCTGTTGGGAATATTAG+TGG | 0.392612 | 8.4:-23570161 | MS.gene011574:CDS |
| ACCCAGAGAAGGTTTGCTTT+TGG | 0.396106 | 8.4:-23567690 | MS.gene011574:CDS |
| CCTGCTTATCCTGAGGATGT+TGG | 0.404513 | 8.4:-23570035 | MS.gene011574:CDS |
| CGAGTTTGGAGACACCTTCT+GGG | 0.407808 | 8.4:+23570483 | None:intergenic |
| AGAAAGAGAGGTTTGATAAT+GGG | 0.410247 | 8.4:-23570200 | MS.gene011574:CDS |
| TTGGTTATGCAAATGATCGC+TGG | 0.410661 | 8.4:-23570284 | MS.gene011574:CDS |
| GTGGGTTGATTATGTTTGGT+GGG | 0.414833 | 8.4:-23570079 | MS.gene011574:CDS |
| TAACTGGATTATTCGTAAAT+GGG | 0.426268 | 8.4:-23568399 | MS.gene011574:CDS |
| CACCTTCTGGGGTATCGAAT+GGG | 0.432566 | 8.4:+23570495 | None:intergenic |
| GCGGTTATCGGTAACTGGTT+TGG | 0.436001 | 8.4:-23570227 | MS.gene011574:CDS |
| CATCCATTGATGTTCGCACT+TGG | 0.440820 | 8.4:-23567667 | MS.gene011574:CDS |
| TGGAATGCACATACTTCTGT+TGG | 0.442604 | 8.4:-23570173 | MS.gene011574:CDS |
| CTCTGGGTCCTGGCCGACGA+AGG | 0.454142 | 8.4:+23567705 | None:intergenic |
| ATTAATTTGATTCCGGGTGG+TGG | 0.455841 | 8.4:+23570665 | None:intergenic |
| CTATGTAACGGTATGTTTGA+AGG | 0.462436 | 8.4:+23570624 | None:intergenic |
| GAACAAGGTTGAAAGGTTCC+CGG | 0.462726 | 8.4:+23568588 | None:intergenic |
| TATATGTCTGTTAAATCTGC+CGG | 0.467831 | 8.4:-23568607 | MS.gene011574:CDS |
| GGTGGGTTGATTATGTTTGG+TGG | 0.475030 | 8.4:-23570080 | MS.gene011574:CDS |
| GGAATGCACATACTTCTGTT+GGG | 0.478363 | 8.4:-23570172 | MS.gene011574:CDS |
| AGCAAACCTTCTCTGGGTCC+TGG | 0.480501 | 8.4:+23567695 | None:intergenic |
| TATCGAATGGGGCCCAGCCG+TGG | 0.484699 | 8.4:+23570507 | None:intergenic |
| CCTTTCAACCTTGTTCGATG+TGG | 0.489500 | 8.4:-23568581 | MS.gene011574:CDS |
| GCTGGGTTGTTTCAGGCGAC+GGG | 0.492735 | 8.4:-23570266 | MS.gene011574:CDS |
| GAACCAAGTGCGAACATCAA+TGG | 0.493999 | 8.4:+23567664 | None:intergenic |
| TTTCTTACGACGGGTATGAT+TGG | 0.495864 | 8.4:-23570374 | MS.gene011574:CDS |
| CTATTGGACCTCTTCTTACA+GGG | 0.499332 | 8.4:-23568252 | MS.gene011574:CDS |
| CAAGAAAACCCAACATCCTC+AGG | 0.503150 | 8.4:+23570026 | None:intergenic |
| GATCGGTATAAAAGCATAGC+AGG | 0.506484 | 8.4:+23568466 | None:intergenic |
| CTTTCAACCTTGTTCGATGT+GGG | 0.507674 | 8.4:-23568580 | MS.gene011574:CDS |
| GCAGTAGTAATAAGTGCATA+AGG | 0.509888 | 8.4:+23568376 | None:intergenic |
| AGATCAAACGTGACAGAAGA+AGG | 0.510233 | 8.4:+23568164 | None:intergenic |
| TCATGGTGATGAAGAGGCTC+AGG | 0.511345 | 8.4:-23570000 | MS.gene011574:intron |
| GTTCTTGTCAACAAGGGGAT+GGG | 0.513552 | 8.4:-23568230 | MS.gene011574:CDS |
| ACACCTTCTGGGGTATCGAA+TGG | 0.514734 | 8.4:+23570494 | None:intergenic |
| AGCTGCCTGCGGTTATAGCA+CGG | 0.515540 | 8.4:+23568506 | None:intergenic |
| AATTAATACGAAACAAAGAA+TGG | 0.518822 | 8.4:-23570649 | MS.gene011574:CDS |
| GTTTCTATGCATGTCAACAT+TGG | 0.518913 | 8.4:-23568433 | MS.gene011574:CDS |
| AGTAATGGACAGCAAACTGC+TGG | 0.522077 | 8.4:-23568100 | MS.gene011574:CDS |
| GGTTGTTTCAGGCGACGGGT+TGG | 0.525053 | 8.4:-23570262 | MS.gene011574:CDS |
| CCTGTCTGAGTCAAGTAAAA+CGG | 0.525191 | 8.4:+23569780 | None:intergenic |
| GCCAAAAGCAAACCTTCTCT+GGG | 0.529666 | 8.4:+23567689 | None:intergenic |
| ACTGCTATCATAGACGGTAC+TGG | 0.531331 | 8.4:-23568289 | MS.gene011574:CDS |
| CCAACATCCTCAGGATAAGC+AGG | 0.533949 | 8.4:+23570035 | None:intergenic |
| CTACGTTTGTTTCTTACGAC+GGG | 0.534514 | 8.4:-23570383 | MS.gene011574:CDS |
| GAAGAAGACCTTCGTCGGCC+AGG | 0.537272 | 8.4:-23567713 | MS.gene011574:CDS |
| GCTGCCTGCGGTTATAGCAC+GGG | 0.540844 | 8.4:+23568507 | None:intergenic |
| ATGTACGTTGCAGGTCACTT+AGG | 0.544023 | 8.4:-23570419 | MS.gene011574:CDS |
| CCAGAAGGTGTCTCCAAACT+CGG | 0.544149 | 8.4:-23570482 | MS.gene011574:CDS |
| TTGTATTCATGGTGATGAAG+AGG | 0.545665 | 8.4:-23570006 | MS.gene011574:CDS |
| CCGATAACCGCGACGACGGA+AGG | 0.546217 | 8.4:+23570239 | None:intergenic |
| TGGTTTGGTAAAAGAAAGAG+AGG | 0.547491 | 8.4:-23570212 | MS.gene011574:CDS |
| ATATGTCTGTTAAATCTGCC+GGG | 0.550570 | 8.4:-23568606 | MS.gene011574:CDS |
| TTTCTTGCCTGCTTATCCTG+AGG | 0.550873 | 8.4:-23570042 | MS.gene011574:CDS |
| AAAACTATGTCTAATAGTAA+TGG | 0.557401 | 8.4:-23568115 | MS.gene011574:CDS |
| TTTGATCTTAGCCGAAATTG+CGG | 0.558724 | 8.4:-23568149 | MS.gene011574:CDS |
| CTTGTAGAAGATGATGGCAT+TGG | 0.559516 | 8.4:+23570692 | None:intergenic |
| TACATCTTTATGAGGAGCAA+TGG | 0.564452 | 8.4:-23567738 | MS.gene011574:intron |
| TGGGTTGATTATGTTTGGTG+GGG | 0.568827 | 8.4:-23570078 | MS.gene011574:CDS |
| GGTTCTTGTCAACAAGGGGA+TGG | 0.569214 | 8.4:-23568231 | MS.gene011574:CDS |
| ACGACGGGTATGATTGGTAG+TGG | 0.569232 | 8.4:-23570368 | MS.gene011574:CDS |
| CGTCGGCCAGGACCCAGAGA+AGG | 0.569292 | 8.4:-23567701 | MS.gene011574:CDS |
| ATCTTTATGAGGAGCAATGG+TGG | 0.570991 | 8.4:-23567735 | MS.gene011574:intron |
| TCAACCTTGTTCGATGTGGG+TGG | 0.572275 | 8.4:-23568577 | MS.gene011574:CDS |
| TACAGGGTTCTTGTCAACAA+GGG | 0.573546 | 8.4:-23568236 | MS.gene011574:CDS |
| AGTGCCCGTGCTATAACCGC+AGG | 0.574871 | 8.4:-23568511 | MS.gene011574:CDS |
| GTTCATGTTGCAGAAATAGG+TGG | 0.582479 | 8.4:-23568634 | MS.gene011574:intron |
| TGGTTATGCAAATGATCGCT+GGG | 0.583125 | 8.4:-23570283 | MS.gene011574:CDS |
| CCACATCGAACAAGGTTGAA+AGG | 0.583431 | 8.4:+23568581 | None:intergenic |
| CGATTCTCGTGCTCTTGCCA+CGG | 0.591120 | 8.4:-23568314 | MS.gene011574:CDS |
| TTCATGTTGCAGAAATAGGT+GGG | 0.591403 | 8.4:-23568633 | MS.gene011574:intron |
| GATTGCATTCAAGGAAGCAG+AGG | 0.592390 | 8.4:+23567621 | None:intergenic |
| TAGAAACACTACCGTATGAT+CGG | 0.594854 | 8.4:+23568449 | None:intergenic |
| GACAAGAACCCTGTAAGAAG+AGG | 0.598403 | 8.4:+23568244 | None:intergenic |
| GGTCCTCTTGTAGAAGATGA+TGG | 0.600737 | 8.4:+23570686 | None:intergenic |
| TGTACCCAAGTCAGCAGAGA+CGG | 0.600855 | 8.4:+23568354 | None:intergenic |
| TTACAGGGTTCTTGTCAACA+AGG | 0.601020 | 8.4:-23568237 | MS.gene011574:CDS |
| ATGCCATCATCTTCTACAAG+AGG | 0.602130 | 8.4:-23570689 | MS.gene011574:CDS |
| ATAGACGGTACTGGATCAGT+TGG | 0.607278 | 8.4:-23568280 | MS.gene011574:CDS |
| GAGTTTGGAGACACCTTCTG+GGG | 0.612909 | 8.4:+23570484 | None:intergenic |
| ACTGCCGTCTCTGCTGACTT+GGG | 0.614479 | 8.4:-23568358 | MS.gene011574:CDS |
| ACAGGGTTCTTGTCAACAAG+GGG | 0.617657 | 8.4:-23568235 | MS.gene011574:CDS |
| ACCTTCTGGGGTATCGAATG+GGG | 0.617671 | 8.4:+23570496 | None:intergenic |
| CACGCTTCACGTAAACCCAC+CGG | 0.618149 | 8.4:-23570566 | MS.gene011574:CDS |
| CCTACGTTTGTTTCTTACGA+CGG | 0.622689 | 8.4:-23570384 | MS.gene011574:CDS |
| AATACCACCCACATCGAACA+AGG | 0.628160 | 8.4:+23568573 | None:intergenic |
| TGGTGGAAGAAGACCTTCGT+CGG | 0.629135 | 8.4:-23567718 | MS.gene011574:CDS |
| GCCCCATTCGATACCCCAGA+AGG | 0.629250 | 8.4:-23570497 | MS.gene011574:CDS |
| CGGTGGGTTTACGTGAAGCG+TGG | 0.636839 | 8.4:+23570567 | None:intergenic |
| TGCATACATGAAGCTGCCTG+CGG | 0.639063 | 8.4:+23568495 | None:intergenic |
| CGTATTAATTTGATTCCGGG+TGG | 0.643624 | 8.4:+23570662 | None:intergenic |
| TCTACAAGAGGACCACCACC+CGG | 0.644475 | 8.4:-23570677 | MS.gene011574:CDS |
| GGTACACATAAATCTCTCAA+AGG | 0.644829 | 8.4:-23568337 | MS.gene011574:CDS |
| GGCAGCGAATAAGGCTTGCG+AGG | 0.651478 | 8.4:+23567642 | None:intergenic |
| AATGGACAGCAAACTGCTGG+AGG | 0.654061 | 8.4:-23568097 | MS.gene011574:intron |
| GTTACCGATAACCGCGACGA+CGG | 0.654160 | 8.4:+23570235 | None:intergenic |
| ACGGTGACTGCTATCATAGA+CGG | 0.656969 | 8.4:-23568295 | MS.gene011574:CDS |
| TTATTAGTAAAACTATGTAA+CGG | 0.663331 | 8.4:+23570612 | None:intergenic |
| GGGTTGGCCTTCCGTCGTCG+CGG | 0.705124 | 8.4:-23570246 | MS.gene011574:CDS |
| GTCTATGATAGCAGTCACCG+TGG | 0.755188 | 8.4:+23568297 | None:intergenic |
| CCGTCGTAAGAAACAAACGT+AGG | 0.790997 | 8.4:+23570384 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGATCAAATTAAGAATT+AGG | - | chr8.4:23570671-23570690 | MS.gene011574:CDS | 15.0% |
| !! | TTATTAGTAAAACTATGTAA+CGG | + | chr8.4:23567642-23567661 | None:intergenic | 15.0% |
| !!! | ACATGAACATTAATTTTTTA+TGG | + | chr8.4:23569605-23569624 | None:intergenic | 15.0% |
| !! | AAAACTATGTCTAATAGTAA+TGG | - | chr8.4:23570136-23570155 | MS.gene011574:CDS | 20.0% |
| !! | AATTAATACGAAACAAAGAA+TGG | - | chr8.4:23567602-23567621 | MS.gene011574:CDS | 20.0% |
| !! | CATTTCATTTCAAATACAAT+TGG | - | chr8.4:23569562-23569581 | MS.gene011574:intron | 20.0% |
| !! | GAATAAAATTACAACTATTG+AGG | - | chr8.4:23569021-23569040 | MS.gene011574:intron | 20.0% |
| !!! | AATAAAAGAGGTTGATATTA+GGG | + | chr8.4:23570350-23570369 | None:intergenic | 20.0% |
| !!! | AGCAATTTTAAAATGATCTA+TGG | + | chr8.4:23568902-23568921 | None:intergenic | 20.0% |
| !!! | ATTTTCTTAAATTATTACCG+CGG | + | chr8.4:23568573-23568592 | None:intergenic | 20.0% |
| !!! | TAATAAAAGAGGTTGATATT+AGG | + | chr8.4:23570351-23570370 | None:intergenic | 20.0% |
| !!! | TAATATCAACCTCTTTTATT+AGG | - | chr8.4:23570350-23570369 | MS.gene011574:CDS | 20.0% |
| !!! | TTGCTTATACTTTTCTTTAT+TGG | - | chr8.4:23568445-23568464 | MS.gene011574:CDS | 20.0% |
| ! | AAAATTACAACTATTGAGGA+GGG | - | chr8.4:23569025-23569044 | MS.gene011574:intron | 25.0% |
| ! | AGCGATATTCATAAAATTTC+AGG | - | chr8.4:23568751-23568770 | MS.gene011574:intron | 25.0% |
| ! | ATAACTGGATTATTCGTAAA+TGG | - | chr8.4:23569851-23569870 | MS.gene011574:intron | 25.0% |
| ! | GCGATATTCATAAAATTTCA+GGG | - | chr8.4:23568752-23568771 | MS.gene011574:intron | 25.0% |
| ! | TAAAATTACAACTATTGAGG+AGG | - | chr8.4:23569024-23569043 | MS.gene011574:intron | 25.0% |
| ! | TAACTGGATTATTCGTAAAT+GGG | - | chr8.4:23569852-23569871 | MS.gene011574:intron | 25.0% |
| ! | TACAATGTGAAATGAAGAAA+TGG | + | chr8.4:23570478-23570497 | None:intergenic | 25.0% |
| ! | TGATTGCAATTTATATGAGA+AGG | - | chr8.4:23569428-23569447 | MS.gene011574:intron | 25.0% |
| !! | AACCAAACTAAACATGTTTT+AGG | + | chr8.4:23569542-23569561 | None:intergenic | 25.0% |
| !! | ACCAAACTAAACATGTTTTA+GGG | + | chr8.4:23569541-23569560 | None:intergenic | 25.0% |
| !! | GTTTCGTATTAATTTGATTC+CGG | + | chr8.4:23567596-23567615 | None:intergenic | 25.0% |
| !! | TTTCGTATTAATTTGATTCC+GGG | + | chr8.4:23567595-23567614 | None:intergenic | 25.0% |
| !!! | GAACATTAATTTTTTATGGC+AGG | + | chr8.4:23569601-23569620 | None:intergenic | 25.0% |
| !!! | TATACTGATTTTTTCAGAGA+TGG | - | chr8.4:23569205-23569224 | MS.gene011574:intron | 25.0% |
| !!! | TCATGAGTTTTGGTTTTTTT+TGG | - | chr8.4:23567948-23567967 | MS.gene011574:intron | 25.0% |
| !!! | TTTTTCTTTTGGTTTCTCAT+AGG | + | chr8.4:23569053-23569072 | None:intergenic | 25.0% |
| !!! | TTTTTGGTATGGGTTTTTTT+TGG | - | chr8.4:23567920-23567939 | MS.gene011574:intron | 25.0% |
| AAGAAAGAGAGGTTTGATAA+TGG | - | chr8.4:23568050-23568069 | MS.gene011574:intron | 30.0% | |
| AATGAAGAAATGGAGTGAAA+AGG | + | chr8.4:23570468-23570487 | None:intergenic | 30.0% | |
| AATGTTCATGTTGCAGAAAT+AGG | - | chr8.4:23569614-23569633 | MS.gene011574:intron | 30.0% | |
| AATTCAAGATCCAACTTTGA+CGG | + | chr8.4:23570288-23570307 | None:intergenic | 30.0% | |
| ATGAAGAAATGGAGTGAAAA+GGG | + | chr8.4:23570467-23570486 | None:intergenic | 30.0% | |
| ATTGGACTTATGTTCATAAC+TGG | - | chr8.4:23569836-23569855 | MS.gene011574:intron | 30.0% | |
| CAAAACATACTCTCAACTAA+AGG | + | chr8.4:23568530-23568549 | None:intergenic | 30.0% | |
| GAATTTAACACTCATGAGTT+TGG | + | chr8.4:23569338-23569357 | None:intergenic | 30.0% | |
| GATAATGCATGAAACTAGAA+AGG | + | chr8.4:23570254-23570273 | None:intergenic | 30.0% | |
| GTATCAAATCTGTCAAATGA+TGG | - | chr8.4:23570180-23570199 | MS.gene011574:CDS | 30.0% | |
| TAAGATGAAGATTGCATTCA+AGG | + | chr8.4:23570642-23570661 | None:intergenic | 30.0% | |
| TATATGTCTGTTAAATCTGC+CGG | - | chr8.4:23569644-23569663 | MS.gene011574:intron | 30.0% | |
| TCCCTAAAACATGTTTAGTT+TGG | - | chr8.4:23569537-23569556 | MS.gene011574:intron | 30.0% | |
| TTGTTCGACTGTATAACTTT+GGG | - | chr8.4:23569074-23569093 | MS.gene011574:intron | 30.0% | |
| TTTCTTGCATGTTACTCTAT+TGG | - | chr8.4:23567808-23567827 | MS.gene011574:intron | 30.0% | |
| ! | AGAAAGAGAGGTTTGATAAT+GGG | - | chr8.4:23568051-23568070 | MS.gene011574:intron | 30.0% |
| ! | ATAAACACTGACTAAAAGCT+CGG | + | chr8.4:23569302-23569321 | None:intergenic | 30.0% |
| ! | ATGCTTTTATACCGATCATA+CGG | - | chr8.4:23569791-23569810 | MS.gene011574:CDS | 30.0% |
| !! | AGTCGAACAACTTTTTCTTT+TGG | + | chr8.4:23569064-23569083 | None:intergenic | 30.0% |
| !! | TAGTGTTTTGGATTATGGTT+GGG | - | chr8.4:23568128-23568147 | MS.gene011574:CDS | 30.0% |
| !! | TTTGGAATGTTCATGAGTTT+TGG | - | chr8.4:23567938-23567957 | MS.gene011574:intron | 30.0% |
| !!! | ATTGGTAGTGGAATTTTTGT+TGG | - | chr8.4:23567895-23567914 | MS.gene011574:intron | 30.0% |
| !!! | GGAATTTTTGTTGGTCTTTT+TGG | - | chr8.4:23567904-23567923 | MS.gene011574:intron | 30.0% |
| !!! | TAATTTTTTATGGCAGGCAA+AGG | + | chr8.4:23569595-23569614 | None:intergenic | 30.0% |
| !!! | TTTGTTGGTCTTTTTGGTAT+GGG | - | chr8.4:23567910-23567929 | MS.gene011574:intron | 30.0% |
| !!! | TTTTGTTGGTCTTTTTGGTA+TGG | - | chr8.4:23567909-23567928 | MS.gene011574:intron | 30.0% |
| AAAGCAAAAGTAATAACCCC+TGG | + | chr8.4:23568402-23568421 | None:intergenic | 35.0% | |
| ACTAATTGACCGACAATAGT+AGG | - | chr8.4:23570390-23570409 | MS.gene011574:CDS | 35.0% | |
| ACTTCTGTTGGGAATATTAG+TGG | - | chr8.4:23568090-23568109 | MS.gene011574:intron | 35.0% | |
| AGGTACTTAGAATGCAATGT+AGG | + | chr8.4:23568510-23568529 | None:intergenic | 35.0% | |
| AGTAAGTTATAGTCACACTC+AGG | - | chr8.4:23569500-23569519 | MS.gene011574:intron | 35.0% | |
| ATAAAGATGTACATGGAAGG+AGG | + | chr8.4:23570504-23570523 | None:intergenic | 35.0% | |
| ATATGTCTGTTAAATCTGCC+GGG | - | chr8.4:23569645-23569664 | MS.gene011574:intron | 35.0% | |
| CGAGAAACTCTCAATAAATG+TGG | + | chr8.4:23569002-23569021 | None:intergenic | 35.0% | |
| CTATGTAACGGTATGTTTGA+AGG | + | chr8.4:23567630-23567649 | None:intergenic | 35.0% | |
| CTATTGTCGGTCAATTAGTA+AGG | + | chr8.4:23570389-23570408 | None:intergenic | 35.0% | |
| CTCATAAAGATGTACATGGA+AGG | + | chr8.4:23570507-23570526 | None:intergenic | 35.0% | |
| CTTCCATGTACATCTTTATG+AGG | - | chr8.4:23570505-23570524 | MS.gene011574:CDS | 35.0% | |
| GCAGTAGTAATAAGTGCATA+AGG | + | chr8.4:23569878-23569897 | None:intergenic | 35.0% | |
| GGTACACATAAATCTCTCAA+AGG | - | chr8.4:23569914-23569933 | MS.gene011574:intron | 35.0% | |
| GTGATTCACTGTGTATAGTT+TGG | - | chr8.4:23569107-23569126 | MS.gene011574:intron | 35.0% | |
| GTTGTTCGACTGTATAACTT+TGG | - | chr8.4:23569073-23569092 | MS.gene011574:intron | 35.0% | |
| GTTTCTATGCATGTCAACAT+TGG | - | chr8.4:23569818-23569837 | MS.gene011574:intron | 35.0% | |
| TACAATCGACCTACTATTGT+CGG | + | chr8.4:23570402-23570421 | None:intergenic | 35.0% | |
| TACATCTTTATGAGGAGCAA+TGG | - | chr8.4:23570513-23570532 | MS.gene011574:CDS | 35.0% | |
| TAGAAACACTACCGTATGAT+CGG | + | chr8.4:23569805-23569824 | None:intergenic | 35.0% | |
| TCTTGTTCTGCTTCAACATA+GGG | - | chr8.4:23569262-23569281 | MS.gene011574:intron | 35.0% | |
| TGAAGAAATGGAGTGAAAAG+GGG | + | chr8.4:23570466-23570485 | None:intergenic | 35.0% | |
| TGTTCGACTGTATAACTTTG+GGG | - | chr8.4:23569075-23569094 | MS.gene011574:intron | 35.0% | |
| TGTTGAAGCAGAACAAGAAA+TGG | + | chr8.4:23569260-23569279 | None:intergenic | 35.0% | |
| TGTTTGAATTCCGTCAAAGT+TGG | - | chr8.4:23570275-23570294 | MS.gene011574:CDS | 35.0% | |
| TTAGAATGCAATGTAGGTGA+TGG | + | chr8.4:23568504-23568523 | None:intergenic | 35.0% | |
| TTCATGTTGCAGAAATAGGT+GGG | - | chr8.4:23569618-23569637 | MS.gene011574:intron | 35.0% | |
| TTCTTGTTCTGCTTCAACAT+AGG | - | chr8.4:23569261-23569280 | MS.gene011574:intron | 35.0% | |
| TTGAAGCTTGTATGATACCA+GGG | - | chr8.4:23568382-23568401 | MS.gene011574:CDS | 35.0% | |
| TTGTACGATGTAAACTGGAA+AGG | + | chr8.4:23570427-23570446 | None:intergenic | 35.0% | |
| TTTGATCTTAGCCGAAATTG+CGG | - | chr8.4:23570102-23570121 | MS.gene011574:CDS | 35.0% | |
| TTTGTCTACCTGTCTTATCA+AGG | - | chr8.4:23570321-23570340 | MS.gene011574:CDS | 35.0% | |
| ! | CTGCGTTGTGTGAATTATTT+TGG | - | chr8.4:23569173-23569192 | MS.gene011574:intron | 35.0% |
| ! | GTGATTTGTACGATGTAAAC+TGG | + | chr8.4:23570432-23570451 | None:intergenic | 35.0% |
| ! | GTTGGGTTTTCTTGTATTCA+TGG | - | chr8.4:23568234-23568253 | MS.gene011574:CDS | 35.0% |
| ! | GTTGTTAAAACTGTTGGTGA+TGG | - | chr8.4:23568273-23568292 | MS.gene011574:CDS | 35.0% |
| ! | TAAACACTGACTAAAAGCTC+GGG | + | chr8.4:23569301-23569320 | None:intergenic | 35.0% |
| ! | TAGAACGCTTTTGACAATTC+CGG | + | chr8.4:23567707-23567726 | None:intergenic | 35.0% |
| ! | TGACATGGTCCTACAATTTT+AGG | + | chr8.4:23568701-23568720 | None:intergenic | 35.0% |
| ! | TTGTATTCATGGTGATGAAG+AGG | - | chr8.4:23568245-23568264 | MS.gene011574:CDS | 35.0% |
| !! | AGTGTTTTGGATTATGGTTG+GGG | - | chr8.4:23568129-23568148 | MS.gene011574:CDS | 35.0% |
| !! | AGTTTTCGTGATGCTAGTTT+TGG | - | chr8.4:23570048-23570067 | MS.gene011574:CDS | 35.0% |
| !! | CTAGTGTTTTGGATTATGGT+TGG | - | chr8.4:23568127-23568146 | MS.gene011574:CDS | 35.0% |
| !! | GAGGTTTGATAATGGGTATT+TGG | - | chr8.4:23568058-23568077 | MS.gene011574:intron | 35.0% |
| !! | TGGTTTGGTAAAAGAAAGAG+AGG | - | chr8.4:23568039-23568058 | MS.gene011574:intron | 35.0% |
| !!! | GTTTTCGTGATGCTAGTTTT+GGG | - | chr8.4:23570049-23570068 | MS.gene011574:CDS | 35.0% |
| AACACCGCTCCTAAAATTGT+AGG | - | chr8.4:23568689-23568708 | MS.gene011574:intron | 40.0% | |
| AGATCAAACGTGACAGAAGA+AGG | + | chr8.4:23570090-23570109 | None:intergenic | 40.0% | |
| ATCTTTATGAGGAGCAATGG+TGG | - | chr8.4:23570516-23570535 | MS.gene011574:CDS | 40.0% | |
| ATGCCATCATCTTCTACAAG+AGG | - | chr8.4:23567562-23567581 | MS.gene011574:CDS | 40.0% | |
| ATGTGGACATATCTCTCAAC+TGG | + | chr8.4:23568985-23569004 | None:intergenic | 40.0% | |
| ATTGTAGGACCATGTCAACT+TGG | - | chr8.4:23568704-23568723 | MS.gene011574:intron | 40.0% | |
| CCTGTCTGAGTCAAGTAAAA+CGG | + | chr8.4:23568474-23568493 | None:intergenic | 40.0% | |
| CTATTGGACCTCTTCTTACA+GGG | - | chr8.4:23569999-23570018 | MS.gene011574:intron | 40.0% | |
| CTTCAACATAGGGGAGTTAT+AGG | - | chr8.4:23569272-23569291 | MS.gene011574:intron | 40.0% | |
| CTTGAAGCTTGTATGATACC+AGG | - | chr8.4:23568381-23568400 | MS.gene011574:CDS | 40.0% | |
| CTTGTTCTGCTTCAACATAG+GGG | - | chr8.4:23569263-23569282 | MS.gene011574:intron | 40.0% | |
| CTTTCAACCTTGTTCGATGT+GGG | - | chr8.4:23569671-23569690 | MS.gene011574:intron | 40.0% | |
| GAAGAAATGGAGTGAAAAGG+GGG | + | chr8.4:23570465-23570484 | None:intergenic | 40.0% | |
| GCTCCTCATAAAGATGTACA+TGG | + | chr8.4:23570511-23570530 | None:intergenic | 40.0% | |
| GGAATGCACATACTTCTGTT+GGG | - | chr8.4:23568079-23568098 | MS.gene011574:intron | 40.0% | |
| GGTCAATTAGTAAGGACCAT+GGG | + | chr8.4:23570381-23570400 | None:intergenic | 40.0% | |
| GTTCATGTTGCAGAAATAGG+TGG | - | chr8.4:23569617-23569636 | MS.gene011574:intron | 40.0% | |
| GTTGTACATTGACACATGCT+AGG | - | chr8.4:23568623-23568642 | MS.gene011574:CDS | 40.0% | |
| GTTTGAGTCTAGCAGAAACT+TGG | - | chr8.4:23568941-23568960 | MS.gene011574:intron | 40.0% | |
| TACAGGGTTCTTGTCAACAA+GGG | - | chr8.4:23570015-23570034 | MS.gene011574:CDS | 40.0% | |
| TGAAGCTTGTATGATACCAG+GGG | - | chr8.4:23568383-23568402 | MS.gene011574:CDS | 40.0% | |
| TGCTCGACTTTGTACAAACA+GGG | - | chr8.4:23568918-23568937 | MS.gene011574:intron | 40.0% | |
| TGGAATGCACATACTTCTGT+TGG | - | chr8.4:23568078-23568097 | MS.gene011574:intron | 40.0% | |
| TGGGTGGATCCTAATAAAAG+AGG | + | chr8.4:23570362-23570381 | None:intergenic | 40.0% | |
| TGGTTATGCAAATGATCGCT+GGG | - | chr8.4:23567968-23567987 | MS.gene011574:intron | 40.0% | |
| TGTCCACCCAAAAAAAACCA+CGG | - | chr8.4:23567727-23567746 | MS.gene011574:CDS | 40.0% | |
| TGTGGACATATCTCTCAACT+GGG | + | chr8.4:23568984-23569003 | None:intergenic | 40.0% | |
| TTACAGGGTTCTTGTCAACA+AGG | - | chr8.4:23570014-23570033 | MS.gene011574:CDS | 40.0% | |
| TTGCTCGACTTTGTACAAAC+AGG | - | chr8.4:23568917-23568936 | MS.gene011574:intron | 40.0% | |
| TTGGTTATGCAAATGATCGC+TGG | - | chr8.4:23567967-23567986 | MS.gene011574:intron | 40.0% | |
| TTGTAGGACCATGTCAACTT+GGG | - | chr8.4:23568705-23568724 | MS.gene011574:intron | 40.0% | |
| TTTCTTACGACGGGTATGAT+TGG | - | chr8.4:23567877-23567896 | MS.gene011574:intron | 40.0% | |
| ! | ATTAATTTGATTCCGGGTGG+TGG | + | chr8.4:23567589-23567608 | None:intergenic | 40.0% |
| ! | CCTACGTTTGTTTCTTACGA+CGG | - | chr8.4:23567867-23567886 | MS.gene011574:intron | 40.0% |
| ! | CGTATTAATTTGATTCCGGG+TGG | + | chr8.4:23567592-23567611 | None:intergenic | 40.0% |
| ! | CTACGTTTGTTTCTTACGAC+GGG | - | chr8.4:23567868-23567887 | MS.gene011574:intron | 40.0% |
| ! | CTTTTATTAGGATCCACCCA+TGG | - | chr8.4:23570362-23570381 | MS.gene011574:CDS | 40.0% |
| ! | GATCGGTATAAAAGCATAGC+AGG | + | chr8.4:23569788-23569807 | None:intergenic | 40.0% |
| ! | GCTCAGGTTGTTAAAACTGT+TGG | - | chr8.4:23568267-23568286 | MS.gene011574:CDS | 40.0% |
| ! | TCGATGTGGGTGGTATTTTT+GGG | - | chr8.4:23569684-23569703 | MS.gene011574:intron | 40.0% |
| ! | TCTTCTTGCTGCTAGTGTTT+TGG | - | chr8.4:23568116-23568135 | MS.gene011574:CDS | 40.0% |
| ! | TTCGATGTGGGTGGTATTTT+TGG | - | chr8.4:23569683-23569702 | MS.gene011574:intron | 40.0% |
| ! | TTTTGGATTATGGTTGGGGT+TGG | - | chr8.4:23568133-23568152 | MS.gene011574:CDS | 40.0% |
| !! | ATTTTTGGGGGAATACTTGC+TGG | - | chr8.4:23569698-23569717 | MS.gene011574:intron | 40.0% |
| !! | CTTGGTGGGTTGATTATGTT+TGG | - | chr8.4:23568168-23568187 | MS.gene011574:CDS | 40.0% |
| !! | GCTGCTAGTGTTTTGGATTA+TGG | - | chr8.4:23568123-23568142 | MS.gene011574:CDS | 40.0% |
| !! | GGTCTTTTGTTTCTCTTGGT+GGG | - | chr8.4:23568154-23568173 | MS.gene011574:CDS | 40.0% |
| !! | GTGGGTTGATTATGTTTGGT+GGG | - | chr8.4:23568172-23568191 | MS.gene011574:CDS | 40.0% |
| !! | GTTAAAACTGTTGGTGATGG+TGG | - | chr8.4:23568276-23568295 | MS.gene011574:CDS | 40.0% |
| !! | GTTTTGGGTGCTTTTATTGC+TGG | - | chr8.4:23570064-23570083 | MS.gene011574:CDS | 40.0% |
| !! | TACATCGATTTCTCCGAGTT+TGG | + | chr8.4:23567785-23567804 | None:intergenic | 40.0% |
| !! | TGGGTTGATTATGTTTGGTG+GGG | - | chr8.4:23568173-23568192 | MS.gene011574:CDS | 40.0% |
| !! | TGGTCCTACAATTTTAGGAG+CGG | + | chr8.4:23568696-23568715 | None:intergenic | 40.0% |
| !! | TGGTCTTTTGTTTCTCTTGG+TGG | - | chr8.4:23568153-23568172 | MS.gene011574:CDS | 40.0% |
| !!! | GGTTGGTCTTTTGTTTCTCT+TGG | - | chr8.4:23568150-23568169 | MS.gene011574:CDS | 40.0% |
| AATACCACCCACATCGAACA+AGG | + | chr8.4:23569681-23569700 | None:intergenic | 45.0% | |
| ACAGGGTTCTTGTCAACAAG+GGG | - | chr8.4:23570016-23570035 | MS.gene011574:CDS | 45.0% | |
| ACCCAAAAAAAACCACGGCT+GGG | - | chr8.4:23567732-23567751 | MS.gene011574:intron | 45.0% | |
| ACGGTGACTGCTATCATAGA+CGG | - | chr8.4:23569956-23569975 | MS.gene011574:intron | 45.0% | |
| ACTGCTATCATAGACGGTAC+TGG | - | chr8.4:23569962-23569981 | MS.gene011574:intron | 45.0% | |
| AGCAGAAACTTGGCAAACCA+AGG | - | chr8.4:23568951-23568970 | MS.gene011574:intron | 45.0% | |
| AGGGAGAATGGAACTGGAAA+GGG | - | chr8.4:23568327-23568346 | MS.gene011574:CDS | 45.0% | |
| ATGAGAAGGTGACACAGTCT+AGG | - | chr8.4:23569442-23569461 | MS.gene011574:intron | 45.0% | |
| ATGTACGTTGCAGGTCACTT+AGG | - | chr8.4:23567832-23567851 | MS.gene011574:intron | 45.0% | |
| CAAGAAAACCCAACATCCTC+AGG | + | chr8.4:23568228-23568247 | None:intergenic | 45.0% | |
| CAATGTACAACGTCAACGCA+TGG | + | chr8.4:23568614-23568633 | None:intergenic | 45.0% | |
| CAATTAGTAAGGACCATGGG+TGG | + | chr8.4:23570378-23570397 | None:intergenic | 45.0% | |
| CATCCATTGATGTTCGCACT+TGG | - | chr8.4:23570584-23570603 | MS.gene011574:CDS | 45.0% | |
| CATTGACACATGCTAGGCAT+TGG | - | chr8.4:23568629-23568648 | MS.gene011574:intron | 45.0% | |
| CCACATCGAACAAGGTTGAA+AGG | + | chr8.4:23569673-23569692 | None:intergenic | 45.0% | |
| CCGTCGTAAGAAACAAACGT+AGG | + | chr8.4:23567870-23567889 | None:intergenic | 45.0% | |
| CCTTTCAACCTTGTTCGATG+TGG | - | chr8.4:23569670-23569689 | MS.gene011574:intron | 45.0% | |
| CGGTCAATTAGTAAGGACCA+TGG | + | chr8.4:23570382-23570401 | None:intergenic | 45.0% | |
| CTGCTTATCCTGAGGATGTT+GGG | - | chr8.4:23568217-23568236 | MS.gene011574:CDS | 45.0% | |
| GAACAAGGTTGAAAGGTTCC+CGG | + | chr8.4:23569666-23569685 | None:intergenic | 45.0% | |
| GAACCAAGTGCGAACATCAA+TGG | + | chr8.4:23570590-23570609 | None:intergenic | 45.0% | |
| GACAAGAACCCTGTAAGAAG+AGG | + | chr8.4:23570010-23570029 | None:intergenic | 45.0% | |
| GACACAGTCTAGGGAGATAA+TGG | - | chr8.4:23569452-23569471 | MS.gene011574:intron | 45.0% | |
| GATTGCATTCAAGGAAGCAG+AGG | + | chr8.4:23570633-23570652 | None:intergenic | 45.0% | |
| GCCAAAAGCAAACCTTCTCT+GGG | + | chr8.4:23570565-23570584 | None:intergenic | 45.0% | |
| GCGCATACACTTCTGATTGA+TGG | + | chr8.4:23568659-23568678 | None:intergenic | 45.0% | |
| GCTATTGGACCTCTTCTTAC+AGG | - | chr8.4:23569998-23570017 | MS.gene011574:intron | 45.0% | |
| GCTCGACTTTGTACAAACAG+GGG | - | chr8.4:23568919-23568938 | MS.gene011574:intron | 45.0% | |
| GGTCCTCTTGTAGAAGATGA+TGG | + | chr8.4:23567568-23567587 | None:intergenic | 45.0% | |
| GTTCTTGTCAACAAGGGGAT+GGG | - | chr8.4:23570021-23570040 | MS.gene011574:CDS | 45.0% | |
| TAGGGTCTCCTTGATAAGAC+AGG | + | chr8.4:23570332-23570351 | None:intergenic | 45.0% | |
| TCTATTGGCATGTACGTTGC+AGG | - | chr8.4:23567823-23567842 | MS.gene011574:intron | 45.0% | |
| TGAGAAGGTGACACAGTCTA+GGG | - | chr8.4:23569443-23569462 | MS.gene011574:intron | 45.0% | |
| TGCCAAAAGCAAACCTTCTC+TGG | + | chr8.4:23570566-23570585 | None:intergenic | 45.0% | |
| TTTCTTGCCTGCTTATCCTG+AGG | - | chr8.4:23568209-23568228 | MS.gene011574:CDS | 45.0% | |
| ! | AACGCTTTTGACAATTCCGG+TGG | + | chr8.4:23567704-23567723 | None:intergenic | 45.0% |
| ! | AATGATCGCTGGGTTGTTTC+AGG | - | chr8.4:23567978-23567997 | MS.gene011574:intron | 45.0% |
| ! | ACGCTTTTGACAATTCCGGT+GGG | + | chr8.4:23567703-23567722 | None:intergenic | 45.0% |
| ! | AGGAGCGGTGTTAATCTATG+TGG | + | chr8.4:23568681-23568700 | None:intergenic | 45.0% |
| ! | ATAGACGGTACTGGATCAGT+TGG | - | chr8.4:23569971-23569990 | MS.gene011574:intron | 45.0% |
| ! | CCGTTTTACTTGACTCAGAC+AGG | - | chr8.4:23568471-23568490 | MS.gene011574:CDS | 45.0% |
| ! | GCCAGTTTTCTCCGCAATTT+CGG | + | chr8.4:23570116-23570135 | None:intergenic | 45.0% |
| !! | AAAACTGTTGGTGATGGTGG+TGG | - | chr8.4:23568279-23568298 | MS.gene011574:CDS | 45.0% |
| !! | ACCCAGAGAAGGTTTGCTTT+TGG | - | chr8.4:23570561-23570580 | MS.gene011574:CDS | 45.0% |
| !! | AGTAATGGACAGCAAACTGC+TGG | - | chr8.4:23570151-23570170 | MS.gene011574:CDS | 45.0% |
| !! | ATGGGAGAGGGAAGAGTATT+GGG | - | chr8.4:23568355-23568374 | MS.gene011574:CDS | 45.0% |
| !! | CGATGTGGGTGGTATTTTTG+GGG | - | chr8.4:23569685-23569704 | MS.gene011574:intron | 45.0% |
| !! | GGTGGGTTGATTATGTTTGG+TGG | - | chr8.4:23568171-23568190 | MS.gene011574:CDS | 45.0% |
| !!! | GATGTGGGTGGTATTTTTGG+GGG | - | chr8.4:23569686-23569705 | MS.gene011574:intron | 45.0% |
| AATGGACAGCAAACTGCTGG+AGG | - | chr8.4:23570154-23570173 | MS.gene011574:CDS | 50.0% | |
| ACGACGGGTATGATTGGTAG+TGG | - | chr8.4:23567883-23567902 | MS.gene011574:intron | 50.0% | |
| CACCCAAAAAAAACCACGGC+TGG | - | chr8.4:23567731-23567750 | MS.gene011574:intron | 50.0% | |
| CATGTCTGTATGACGAACCG+CGG | - | chr8.4:23568553-23568572 | MS.gene011574:CDS | 50.0% | |
| CCAACATCCTCAGGATAAGC+AGG | + | chr8.4:23568219-23568238 | None:intergenic | 50.0% | |
| CCTGCTTATCCTGAGGATGT+TGG | - | chr8.4:23568216-23568235 | MS.gene011574:CDS | 50.0% | |
| CGAGTTTGGAGACACCTTCT+GGG | + | chr8.4:23567771-23567790 | None:intergenic | 50.0% | |
| CTCAACTGGGACTCAAACCT+TGG | + | chr8.4:23568971-23568990 | None:intergenic | 50.0% | |
| GAACTGGAAAGGGTGGTGAT+GGG | - | chr8.4:23568337-23568356 | MS.gene011574:CDS | 50.0% | |
| GAGAATGGAACTGGAAAGGG+TGG | - | chr8.4:23568330-23568349 | MS.gene011574:CDS | 50.0% | |
| GAGGGAGAATGGAACTGGAA+AGG | - | chr8.4:23568326-23568345 | MS.gene011574:CDS | 50.0% | |
| GAGTTTGGAGACACCTTCTG+GGG | + | chr8.4:23567770-23567789 | None:intergenic | 50.0% | |
| GCCGAAATTGCGGAGAAAAC+TGG | - | chr8.4:23570112-23570131 | MS.gene011574:CDS | 50.0% | |
| GCGGTTATCGGTAACTGGTT+TGG | - | chr8.4:23568024-23568043 | MS.gene011574:intron | 50.0% | |
| GGTTCTTGTCAACAAGGGGA+TGG | - | chr8.4:23570020-23570039 | MS.gene011574:CDS | 50.0% | |
| GTCTATGATAGCAGTCACCG+TGG | + | chr8.4:23569957-23569976 | None:intergenic | 50.0% | |
| TCAACCTTGTTCGATGTGGG+TGG | - | chr8.4:23569674-23569693 | MS.gene011574:intron | 50.0% | |
| TGCATACATGAAGCTGCCTG+CGG | + | chr8.4:23569759-23569778 | None:intergenic | 50.0% | |
| TGGTGGAAGAAGACCTTCGT+CGG | - | chr8.4:23570533-23570552 | MS.gene011574:CDS | 50.0% | |
| TGTACCCAAGTCAGCAGAGA+CGG | + | chr8.4:23569900-23569919 | None:intergenic | 50.0% | |
| ! | GATGGGAGAGGGAAGAGTAT+TGG | - | chr8.4:23568354-23568373 | MS.gene011574:CDS | 50.0% |
| ! | GGATCAGTTGGTGCAGCTAT+TGG | - | chr8.4:23569983-23570002 | MS.gene011574:intron | 50.0% |
| ! | GTCTGTCTCCCAAGTTGACA+TGG | + | chr8.4:23568716-23568735 | None:intergenic | 50.0% |
| ! | TCATGGTGATGAAGAGGCTC+AGG | - | chr8.4:23568251-23568270 | MS.gene011574:CDS | 50.0% |
| !! | ACACCTTCTGGGGTATCGAA+TGG | + | chr8.4:23567760-23567779 | None:intergenic | 50.0% |
| !! | ACCTTCTGGGGTATCGAATG+GGG | + | chr8.4:23567758-23567777 | None:intergenic | 50.0% |
| !! | CACCTTCTGGGGTATCGAAT+GGG | + | chr8.4:23567759-23567778 | None:intergenic | 50.0% |
| !! | CCAGAAGGTGTCTCCAAACT+CGG | - | chr8.4:23567769-23567788 | MS.gene011574:intron | 50.0% |
| !!! | CAGCCGTGGTTTTTTTTGGG+TGG | + | chr8.4:23567733-23567752 | None:intergenic | 50.0% |
| !!! | GCCCAGCCGTGGTTTTTTTT+GGG | + | chr8.4:23567736-23567755 | None:intergenic | 50.0% |
| AGCAAACCTTCTCTGGGTCC+TGG | + | chr8.4:23570559-23570578 | None:intergenic | 55.0% | |
| AGCTGCCTGCGGTTATAGCA+CGG | + | chr8.4:23569748-23569767 | None:intergenic | 55.0% | |
| CACGCTTCACGTAAACCCAC+CGG | - | chr8.4:23567685-23567704 | MS.gene011574:CDS | 55.0% | |
| CCGAGTTTGGAGACACCTTC+TGG | + | chr8.4:23567772-23567791 | None:intergenic | 55.0% | |
| CGATTCTCGTGCTCTTGCCA+CGG | - | chr8.4:23569937-23569956 | MS.gene011574:intron | 55.0% | |
| GGAACTGGAAAGGGTGGTGA+TGG | - | chr8.4:23568336-23568355 | MS.gene011574:CDS | 55.0% | |
| GGAAGCAGAGGCAGCGAATA+AGG | + | chr8.4:23570621-23570640 | None:intergenic | 55.0% | |
| GTTACCGATAACCGCGACGA+CGG | + | chr8.4:23568019-23568038 | None:intergenic | 55.0% | |
| GTTGAAGGGGAGAGGGAGAA+TGG | - | chr8.4:23568315-23568334 | MS.gene011574:CDS | 55.0% | |
| TCGTCGCGGTTATCGGTAAC+TGG | - | chr8.4:23568019-23568038 | MS.gene011574:intron | 55.0% | |
| TCTACAAGAGGACCACCACC+CGG | - | chr8.4:23567574-23567593 | MS.gene011574:CDS | 55.0% | |
| TGTGGTGGTTGAAGGGGAGA+GGG | - | chr8.4:23568308-23568327 | MS.gene011574:CDS | 55.0% | |
| ! | GTGGTGGTGTGGTGGTTGAA+GGG | - | chr8.4:23568301-23568320 | MS.gene011574:CDS | 55.0% |
| ! | TACTGCCGTCTCTGCTGACT+TGG | - | chr8.4:23569892-23569911 | MS.gene011574:intron | 55.0% |
| ! | TGGTGGTGTGGTGGTTGAAG+GGG | - | chr8.4:23568302-23568321 | MS.gene011574:CDS | 55.0% |
| !! | ACTGCCGTCTCTGCTGACTT+GGG | - | chr8.4:23569893-23569912 | MS.gene011574:intron | 55.0% |
| !! | ACTGTTGGTGATGGTGGTGG+TGG | - | chr8.4:23568282-23568301 | MS.gene011574:CDS | 55.0% |
| !! | GAAAGGGTGGTGATGGGAGA+GGG | - | chr8.4:23568343-23568362 | MS.gene011574:CDS | 55.0% |
| !!! | GGCCCAGCCGTGGTTTTTTT+TGG | + | chr8.4:23567737-23567756 | None:intergenic | 55.0% |
| AGTGCCCGTGCTATAACCGC+AGG | - | chr8.4:23569740-23569759 | MS.gene011574:intron | 60.0% | |
| CCTTCCGTCGTCGCGGTTAT+CGG | - | chr8.4:23568012-23568031 | MS.gene011574:intron | 60.0% | |
| GAAGAAGACCTTCGTCGGCC+AGG | - | chr8.4:23570538-23570557 | MS.gene011574:CDS | 60.0% | |
| GCCCCATTCGATACCCCAGA+AGG | - | chr8.4:23567754-23567773 | MS.gene011574:intron | 60.0% | |
| GCTGCCTGCGGTTATAGCAC+GGG | + | chr8.4:23569747-23569766 | None:intergenic | 60.0% | |
| GGCAGCGAATAAGGCTTGCG+AGG | + | chr8.4:23570612-23570631 | None:intergenic | 60.0% | |
| GGGGAGAGGGAGAATGGAAC+TGG | - | chr8.4:23568321-23568340 | MS.gene011574:CDS | 60.0% | |
| GTGTGGTGGTTGAAGGGGAG+AGG | - | chr8.4:23568307-23568326 | MS.gene011574:CDS | 60.0% | |
| ! | CGCTGGGTTGTTTCAGGCGA+CGG | - | chr8.4:23567984-23568003 | MS.gene011574:intron | 60.0% |
| ! | CGGTGGGTTTACGTGAAGCG+TGG | + | chr8.4:23567687-23567706 | None:intergenic | 60.0% |
| ! | GCTGGGTTGTTTCAGGCGAC+GGG | - | chr8.4:23567985-23568004 | MS.gene011574:intron | 60.0% |
| ! | GGTGGTGGTGTGGTGGTTGA+AGG | - | chr8.4:23568300-23568319 | MS.gene011574:CDS | 60.0% |
| ! | GGTTGTTTCAGGCGACGGGT+TGG | - | chr8.4:23567989-23568008 | MS.gene011574:intron | 60.0% |
| !! | GGAAAGGGTGGTGATGGGAG+AGG | - | chr8.4:23568342-23568361 | MS.gene011574:CDS | 60.0% |
| !! | GTTGGTGATGGTGGTGGTGG+TGG | - | chr8.4:23568285-23568304 | MS.gene011574:CDS | 60.0% |
| !! | TGATGGTGGTGGTGGTGGTG+TGG | - | chr8.4:23568290-23568309 | MS.gene011574:CDS | 60.0% |
| CCGATAACCGCGACGACGGA+AGG | + | chr8.4:23568015-23568034 | None:intergenic | 65.0% | |
| TATCGAATGGGGCCCAGCCG+TGG | + | chr8.4:23567747-23567766 | None:intergenic | 65.0% | |
| !! | TGGTGGTGGTGGTGGTGTGG+TGG | - | chr8.4:23568293-23568312 | MS.gene011574:CDS | 65.0% |
| CGTCGGCCAGGACCCAGAGA+AGG | - | chr8.4:23570550-23570569 | MS.gene011574:CDS | 70.0% | |
| CTCTGGGTCCTGGCCGACGA+AGG | + | chr8.4:23570549-23570568 | None:intergenic | 70.0% | |
| !! | GGGTTGGCCTTCCGTCGTCG+CGG | - | chr8.4:23568005-23568024 | MS.gene011574:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 23567562 | 23570711 | 23567562 | ID=MS.gene011574 |
| chr8.4 | mRNA | 23567562 | 23570711 | 23567562 | ID=MS.gene011574.t1;Parent=MS.gene011574 |
| chr8.4 | exon | 23570001 | 23570711 | 23570001 | ID=MS.gene011574.t1.exon1;Parent=MS.gene011574.t1 |
| chr8.4 | CDS | 23570001 | 23570711 | 23570001 | ID=cds.MS.gene011574.t1;Parent=MS.gene011574.t1 |
| chr8.4 | exon | 23569781 | 23569832 | 23569781 | ID=MS.gene011574.t1.exon2;Parent=MS.gene011574.t1 |
| chr8.4 | CDS | 23569781 | 23569832 | 23569781 | ID=cds.MS.gene011574.t1;Parent=MS.gene011574.t1 |
| chr8.4 | exon | 23568098 | 23568643 | 23568098 | ID=MS.gene011574.t1.exon3;Parent=MS.gene011574.t1 |
| chr8.4 | CDS | 23568098 | 23568643 | 23568098 | ID=cds.MS.gene011574.t1;Parent=MS.gene011574.t1 |
| chr8.4 | exon | 23567562 | 23567746 | 23567562 | ID=MS.gene011574.t1.exon4;Parent=MS.gene011574.t1 |
| chr8.4 | CDS | 23567562 | 23567746 | 23567562 | ID=cds.MS.gene011574.t1;Parent=MS.gene011574.t1 |
| Gene Sequence |
| Protein sequence |
