Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97579.t1 | XP_024625904.1 | 96 | 322 | 13 | 0 | 57 | 378 | 217 | 538 | 1.10E-186 | 662.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97579.t1 | Q0WV13 | 85.4 | 321 | 47 | 0 | 57 | 377 | 213 | 533 | 2.9e-170 | 599.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97579.t1 | A0A396GTI2 | 96.0 | 322 | 13 | 0 | 57 | 378 | 217 | 538 | 8.3e-187 | 662.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052361 | MS.gene97579 | 0.808706 | 2.71E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97579.t1 | MTR_7g012370 | 95.114 | 307 | 15 | 0 | 57 | 363 | 217 | 523 | 0.0 | 624 |
MS.gene97579.t1 | MTR_6g013840 | 85.404 | 322 | 47 | 0 | 57 | 378 | 212 | 533 | 0.0 | 576 |
MS.gene97579.t1 | MTR_7g012370 | 94.298 | 228 | 13 | 0 | 57 | 284 | 217 | 444 | 7.20e-161 | 459 |
MS.gene97579.t1 | MTR_2g082650 | 58.750 | 320 | 132 | 0 | 57 | 376 | 92 | 411 | 6.01e-150 | 430 |
MS.gene97579.t1 | MTR_2g082650 | 58.750 | 320 | 132 | 0 | 57 | 376 | 221 | 540 | 2.41e-148 | 431 |
MS.gene97579.t1 | MTR_4g133570 | 57.500 | 320 | 136 | 0 | 57 | 376 | 144 | 463 | 3.00e-144 | 417 |
MS.gene97579.t1 | MTR_3g452360 | 49.533 | 321 | 149 | 2 | 58 | 375 | 69 | 379 | 5.92e-113 | 335 |
MS.gene97579.t1 | MTR_3g452360 | 49.533 | 321 | 149 | 2 | 58 | 375 | 218 | 528 | 6.59e-112 | 337 |
MS.gene97579.t1 | MTR_2g015550 | 45.833 | 336 | 152 | 6 | 39 | 374 | 226 | 531 | 4.33e-106 | 322 |
MS.gene97579.t1 | MTR_2g027740 | 48.428 | 318 | 146 | 5 | 58 | 375 | 366 | 665 | 4.81e-103 | 318 |
MS.gene97579.t1 | MTR_8g092000 | 46.875 | 320 | 149 | 5 | 58 | 377 | 282 | 580 | 8.34e-101 | 310 |
MS.gene97579.t1 | MTR_3g107930 | 45.000 | 320 | 162 | 3 | 58 | 377 | 283 | 588 | 2.19e-100 | 309 |
MS.gene97579.t1 | MTR_3g107930 | 45.000 | 320 | 162 | 3 | 58 | 377 | 360 | 665 | 1.84e-99 | 309 |
MS.gene97579.t1 | MTR_7g075840 | 45.938 | 320 | 157 | 4 | 58 | 377 | 361 | 664 | 3.67e-97 | 303 |
MS.gene97579.t1 | MTR_7g055600 | 45.875 | 303 | 149 | 4 | 72 | 374 | 144 | 431 | 2.23e-96 | 294 |
MS.gene97579.t1 | MTR_7g057530 | 45.875 | 303 | 149 | 4 | 72 | 374 | 144 | 431 | 2.23e-96 | 294 |
MS.gene97579.t1 | MTR_4g109890 | 42.388 | 335 | 163 | 6 | 39 | 373 | 228 | 532 | 3.53e-94 | 291 |
MS.gene97579.t1 | MTR_8g033360 | 46.831 | 284 | 137 | 5 | 58 | 341 | 328 | 597 | 2.52e-88 | 281 |
MS.gene97579.t1 | MTR_2g461670 | 41.509 | 318 | 167 | 5 | 58 | 375 | 291 | 589 | 6.05e-87 | 275 |
MS.gene97579.t1 | MTR_6g016380 | 44.340 | 318 | 161 | 4 | 58 | 374 | 250 | 552 | 1.76e-86 | 272 |
MS.gene97579.t1 | MTR_2g006790 | 40.774 | 336 | 145 | 7 | 39 | 374 | 226 | 507 | 1.30e-83 | 263 |
MS.gene97579.t1 | MTR_7g096160 | 35.000 | 320 | 168 | 4 | 58 | 376 | 373 | 653 | 1.53e-68 | 228 |
MS.gene97579.t1 | MTR_1g070490 | 34.062 | 320 | 175 | 3 | 58 | 377 | 316 | 599 | 8.11e-55 | 191 |
MS.gene97579.t1 | MTR_4g133942 | 42.995 | 207 | 81 | 4 | 172 | 375 | 160 | 332 | 2.46e-44 | 156 |
MS.gene97579.t1 | MTR_7g074680 | 32.615 | 325 | 177 | 6 | 58 | 375 | 274 | 563 | 1.14e-42 | 157 |
MS.gene97579.t1 | MTR_7g074680 | 32.615 | 325 | 177 | 6 | 58 | 375 | 314 | 603 | 1.22e-42 | 157 |
MS.gene97579.t1 | MTR_7g074680 | 32.615 | 325 | 177 | 6 | 58 | 375 | 334 | 623 | 1.83e-42 | 157 |
MS.gene97579.t1 | MTR_7g074680 | 32.615 | 325 | 177 | 6 | 58 | 375 | 371 | 660 | 2.39e-42 | 157 |
MS.gene97579.t1 | MTR_7g074680 | 32.615 | 325 | 177 | 6 | 58 | 375 | 334 | 623 | 2.44e-42 | 156 |
MS.gene97579.t1 | MTR_7g074680 | 32.615 | 325 | 177 | 6 | 58 | 375 | 354 | 643 | 3.15e-42 | 156 |
MS.gene97579.t1 | MTR_4g118030 | 30.769 | 208 | 118 | 8 | 174 | 367 | 145 | 340 | 4.83e-25 | 104 |
MS.gene97579.t1 | MTR_3g092310 | 31.351 | 185 | 109 | 7 | 174 | 350 | 140 | 314 | 1.43e-21 | 94.7 |
MS.gene97579.t1 | MTR_5g036580 | 31.522 | 184 | 107 | 8 | 174 | 348 | 166 | 339 | 2.50e-21 | 94.7 |
MS.gene97579.t1 | MTR_7g094230 | 28.780 | 205 | 121 | 7 | 174 | 365 | 151 | 343 | 1.28e-20 | 92.4 |
MS.gene97579.t1 | MTR_7g109210 | 30.168 | 179 | 113 | 6 | 174 | 347 | 159 | 330 | 2.47e-19 | 88.6 |
MS.gene97579.t1 | MTR_6g008900 | 28.796 | 191 | 121 | 7 | 174 | 357 | 165 | 347 | 2.49e-19 | 89.0 |
MS.gene97579.t1 | MTR_4g071620 | 28.796 | 191 | 121 | 7 | 174 | 357 | 165 | 347 | 2.49e-19 | 89.0 |
MS.gene97579.t1 | MTR_3g111600 | 29.891 | 184 | 110 | 7 | 174 | 348 | 80 | 253 | 3.12e-19 | 87.0 |
MS.gene97579.t1 | MTR_8g078240 | 28.108 | 185 | 112 | 7 | 174 | 347 | 142 | 316 | 1.28e-17 | 83.6 |
MS.gene97579.t1 | MTR_1g089820 | 29.126 | 206 | 121 | 7 | 174 | 366 | 154 | 347 | 7.05e-17 | 81.6 |
MS.gene97579.t1 | MTR_5g019220 | 28.333 | 180 | 116 | 6 | 174 | 347 | 166 | 338 | 3.88e-16 | 79.3 |
MS.gene97579.t1 | MTR_1g021855 | 28.571 | 182 | 116 | 6 | 174 | 348 | 165 | 339 | 6.91e-16 | 78.6 |
MS.gene97579.t1 | MTR_4g081360 | 50.000 | 72 | 20 | 1 | 307 | 378 | 4 | 59 | 1.26e-15 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97579.t1 | AT3G01040 | 85.358 | 321 | 47 | 0 | 57 | 377 | 212 | 532 | 0.0 | 576 |
MS.gene97579.t1 | AT3G01040 | 85.358 | 321 | 47 | 0 | 57 | 377 | 212 | 532 | 0.0 | 576 |
MS.gene97579.t1 | AT5G15470 | 83.801 | 321 | 52 | 0 | 57 | 377 | 212 | 532 | 0.0 | 574 |
MS.gene97579.t1 | AT3G01040 | 77.570 | 321 | 39 | 1 | 57 | 377 | 212 | 499 | 8.13e-177 | 501 |
MS.gene97579.t1 | AT5G54690 | 60.248 | 322 | 128 | 0 | 57 | 378 | 214 | 535 | 7.50e-151 | 437 |
MS.gene97579.t1 | AT3G58790 | 49.062 | 320 | 158 | 3 | 58 | 375 | 90 | 406 | 1.41e-108 | 324 |
MS.gene97579.t1 | AT3G58790 | 49.062 | 320 | 158 | 3 | 58 | 375 | 222 | 538 | 2.15e-107 | 326 |
MS.gene97579.t1 | AT3G25140 | 47.634 | 317 | 151 | 4 | 58 | 374 | 255 | 556 | 5.78e-105 | 320 |
MS.gene97579.t1 | AT5G47780 | 47.170 | 318 | 150 | 4 | 58 | 375 | 315 | 614 | 1.87e-104 | 320 |
MS.gene97579.t1 | AT4G38270 | 45.625 | 320 | 160 | 3 | 58 | 377 | 371 | 676 | 2.67e-102 | 317 |
MS.gene97579.t1 | AT3G61130 | 44.062 | 320 | 162 | 4 | 58 | 377 | 371 | 673 | 2.97e-102 | 317 |
MS.gene97579.t1 | AT4G38270 | 45.625 | 320 | 160 | 3 | 58 | 377 | 375 | 680 | 3.04e-102 | 317 |
MS.gene97579.t1 | AT1G18580 | 43.582 | 335 | 161 | 6 | 39 | 373 | 228 | 534 | 5.34e-100 | 306 |
MS.gene97579.t1 | AT2G20810 | 46.395 | 319 | 150 | 6 | 58 | 374 | 235 | 534 | 1.36e-92 | 288 |
MS.gene97579.t1 | AT2G46480 | 45.000 | 320 | 162 | 4 | 58 | 377 | 235 | 540 | 2.48e-92 | 287 |
MS.gene97579.t1 | AT2G46480 | 45.000 | 320 | 162 | 4 | 58 | 377 | 248 | 553 | 3.46e-92 | 287 |
MS.gene97579.t1 | AT3G02350 | 46.082 | 319 | 156 | 5 | 58 | 375 | 256 | 559 | 5.01e-85 | 269 |
MS.gene97579.t1 | AT2G46480 | 40.938 | 320 | 150 | 4 | 58 | 377 | 235 | 515 | 2.75e-80 | 255 |
MS.gene97579.t1 | AT2G46480 | 40.938 | 320 | 150 | 4 | 58 | 377 | 248 | 528 | 3.98e-80 | 255 |
MS.gene97579.t1 | AT1G06780 | 37.500 | 320 | 162 | 4 | 58 | 376 | 319 | 601 | 3.25e-71 | 234 |
MS.gene97579.t1 | AT1G06780 | 37.500 | 320 | 162 | 4 | 58 | 376 | 306 | 588 | 3.32e-71 | 233 |
MS.gene97579.t1 | AT2G30575 | 37.188 | 320 | 165 | 4 | 58 | 377 | 327 | 610 | 1.55e-69 | 229 |
MS.gene97579.t1 | AT2G38650 | 33.841 | 328 | 184 | 7 | 48 | 375 | 323 | 617 | 7.70e-49 | 174 |
MS.gene97579.t1 | AT2G38650 | 33.841 | 328 | 184 | 7 | 48 | 375 | 323 | 617 | 7.70e-49 | 174 |
MS.gene97579.t1 | AT2G38650 | 35.443 | 237 | 121 | 6 | 48 | 284 | 323 | 527 | 4.16e-28 | 115 |
MS.gene97579.t1 | AT4G02130 | 29.146 | 199 | 128 | 5 | 174 | 365 | 150 | 342 | 2.22e-22 | 97.4 |
MS.gene97579.t1 | AT4G02130 | 29.146 | 199 | 128 | 5 | 174 | 365 | 150 | 342 | 2.22e-22 | 97.4 |
MS.gene97579.t1 | AT4G02130 | 29.146 | 199 | 128 | 5 | 174 | 365 | 150 | 342 | 2.22e-22 | 97.4 |
MS.gene97579.t1 | AT3G06260 | 27.885 | 208 | 123 | 8 | 174 | 367 | 150 | 344 | 4.41e-22 | 96.7 |
MS.gene97579.t1 | AT1G70090 | 30.882 | 204 | 119 | 10 | 174 | 365 | 169 | 362 | 1.16e-21 | 95.9 |
MS.gene97579.t1 | AT1G70090 | 30.882 | 204 | 119 | 10 | 174 | 365 | 169 | 362 | 1.16e-21 | 95.9 |
MS.gene97579.t1 | AT3G28340 | 30.769 | 182 | 116 | 5 | 172 | 348 | 153 | 329 | 2.43e-20 | 91.7 |
MS.gene97579.t1 | AT1G02720 | 23.125 | 320 | 194 | 8 | 59 | 374 | 90 | 361 | 3.43e-20 | 91.3 |
MS.gene97579.t1 | AT1G02720 | 23.125 | 320 | 194 | 8 | 59 | 374 | 90 | 361 | 3.43e-20 | 91.3 |
MS.gene97579.t1 | AT1G24170 | 30.435 | 207 | 116 | 10 | 174 | 365 | 172 | 365 | 6.14e-20 | 90.9 |
MS.gene97579.t1 | AT1G13250 | 32.418 | 182 | 107 | 5 | 174 | 348 | 144 | 316 | 8.15e-20 | 90.1 |
MS.gene97579.t1 | AT3G62660 | 28.061 | 196 | 131 | 4 | 174 | 365 | 164 | 353 | 1.32e-19 | 89.7 |
MS.gene97579.t1 | AT1G19300 | 28.415 | 183 | 112 | 7 | 174 | 347 | 150 | 322 | 2.03e-16 | 80.1 |
MS.gene97579.t1 | AT3G50760 | 28.042 | 189 | 114 | 7 | 172 | 348 | 134 | 312 | 5.39e-16 | 79.0 |
Find 88 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGCGTTGATTGCATTTAA+AGG | 0.184721 | 7.4:-86973600 | MS.gene97579:CDS |
AGATATGTACTTTGGGCTTC+TGG | 0.231033 | 7.4:+86975768 | None:intergenic |
TTGAACATCTTCGGCCATTT+TGG | 0.246133 | 7.4:-86973443 | MS.gene97579:CDS |
GAAGCTGTAGAAAATCAAAA+TGG | 0.269468 | 7.4:-86975877 | MS.gene97579:CDS |
ACGCGACTTGTCTGCACTTT+GGG | 0.274770 | 7.4:-86974566 | MS.gene97579:CDS |
CGCCATTTACCTTGCCTTCA+AGG | 0.290662 | 7.4:+86974536 | None:intergenic |
GACCTTGAAGGCAAGGTAAA+TGG | 0.316416 | 7.4:-86974538 | MS.gene97579:CDS |
TAAGAGAAACTTATCATTCC+TGG | 0.318236 | 7.4:-86974348 | MS.gene97579:CDS |
AAGACTACCTTGTCAAGGTT+TGG | 0.325370 | 7.4:+86974613 | None:intergenic |
TTCCTAGCTTCCACATTGTT+AGG | 0.326112 | 7.4:+86973631 | None:intergenic |
TCCTACATTTCTCAATGTTA+TGG | 0.337019 | 7.4:-86976504 | MS.gene97579:CDS |
TTGACATACTTGGTCCAAAA+TGG | 0.340621 | 7.4:+86973429 | None:intergenic |
GAGAACTCAAGTTGAAAATC+AGG | 0.348085 | 7.4:+86976855 | None:intergenic |
GAATATTGAGAATGTGAAAA+AGG | 0.351686 | 7.4:-86973517 | MS.gene97579:CDS |
AGACTACCTTGTCAAGGTTT+GGG | 0.370569 | 7.4:+86974614 | None:intergenic |
TCCCCTCATATCAAATCATT+TGG | 0.373039 | 7.4:-86974440 | MS.gene97579:CDS |
CGGCAGCGGACTATGATTCT+TGG | 0.378716 | 7.4:+86973373 | None:intergenic |
TGGAGCCCTGACCTTCAAAT+TGG | 0.379015 | 7.4:-86976810 | MS.gene97579:intron |
CTCTAGTCAACCATTCAAAC+TGG | 0.402791 | 7.4:+86975917 | None:intergenic |
TATCATGGAAATCATTTAGC+TGG | 0.410207 | 7.4:-86975841 | MS.gene97579:CDS |
CTTGCAGAGGAGAAGATGAT+TGG | 0.415124 | 7.4:-86974504 | MS.gene97579:CDS |
TCTTGGCACATGCTTGGCTT+AGG | 0.416454 | 7.4:-86973555 | MS.gene97579:CDS |
TTGAGTAAAGATATGTACTT+TGG | 0.419115 | 7.4:+86975760 | None:intergenic |
TGAAGTGGCTAAAATGTTAT+CGG | 0.422568 | 7.4:+86976089 | None:intergenic |
CAATTGGCTTTGAACATCTT+CGG | 0.423826 | 7.4:-86973452 | MS.gene97579:CDS |
TACGCCCATGCACACTCATC+AGG | 0.425440 | 7.4:+86974415 | None:intergenic |
CTTTGGGAAATTGACCTTGA+AGG | 0.430875 | 7.4:-86974550 | MS.gene97579:CDS |
AACGCGACTTGTCTGCACTT+TGG | 0.431424 | 7.4:-86974567 | MS.gene97579:CDS |
TCAACACCAATTTGAAGGTC+AGG | 0.435115 | 7.4:+86976804 | None:intergenic |
GGTCCAAATGATTTGATATG+AGG | 0.436395 | 7.4:+86974437 | None:intergenic |
TAGAAAATCAAAATGGGATC+AGG | 0.436638 | 7.4:-86975870 | MS.gene97579:CDS |
AAGGCATTCACCAGTTTGAA+TGG | 0.439030 | 7.4:-86975927 | MS.gene97579:CDS |
ATTTGAATAATTGACATACT+TGG | 0.448993 | 7.4:+86973419 | None:intergenic |
TGAGTAAAGATATGTACTTT+GGG | 0.451858 | 7.4:+86975761 | None:intergenic |
CCTTTGATTTCAACTGCAGT+AGG | 0.452034 | 7.4:+86975946 | None:intergenic |
GAGTTCTCTCTGGAGTACTA+TGG | 0.458256 | 7.4:-86976840 | MS.gene97579:CDS |
GGAATGAATATCTTCGATCT+TGG | 0.464332 | 7.4:-86974391 | MS.gene97579:CDS |
GAAGGAGCCTGAAGTAGAAA+AGG | 0.465411 | 7.4:+86976531 | None:intergenic |
CGAAGATGTTCAAAGCCAAT+TGG | 0.471229 | 7.4:+86973453 | None:intergenic |
TCAAAACCCTGGTTACCAAT+TGG | 0.472317 | 7.4:-86973468 | MS.gene97579:CDS |
GATCCCTCTTGGCACATGCT+TGG | 0.476353 | 7.4:-86973561 | MS.gene97579:CDS |
TGCAATCAACGCAGGAGGTA+GGG | 0.477082 | 7.4:+86973608 | None:intergenic |
TGGACTCGATTCACTAAGAT+TGG | 0.485471 | 7.4:+86975816 | None:intergenic |
TTTCAGGTTTCAGAGCTGAC+TGG | 0.498766 | 7.4:+86976046 | None:intergenic |
AAGCTGTAGAAAATCAAAAT+GGG | 0.500474 | 7.4:-86975876 | MS.gene97579:CDS |
GGGATCAGGAATTACTATCA+TGG | 0.500724 | 7.4:-86975856 | MS.gene97579:CDS |
TTATCATTCCTGGCTTAAAG+AGG | 0.501060 | 7.4:-86974338 | MS.gene97579:intron |
TTCAAAGCCAATTGGTAACC+AGG | 0.502424 | 7.4:+86973461 | None:intergenic |
GCCATAACATTGAGAAATGT+AGG | 0.505204 | 7.4:+86976503 | None:intergenic |
CTTTGATTTCAACTGCAGTA+GGG | 0.507244 | 7.4:+86975947 | None:intergenic |
TGAGAAATGTAGGAGATTGA+AGG | 0.509951 | 7.4:+86976513 | None:intergenic |
ATGCAATCAACGCAGGAGGT+AGG | 0.512557 | 7.4:+86973607 | None:intergenic |
TTGCAGAGGAGAAGATGATT+GGG | 0.512655 | 7.4:-86974503 | MS.gene97579:CDS |
TTCATCCAATCGATCCCTCT+TGG | 0.512998 | 7.4:-86973572 | MS.gene97579:CDS |
GTCCAAATGATTTGATATGA+GGG | 0.523698 | 7.4:+86974438 | None:intergenic |
GGAAATTGACCTTGAAGGCA+AGG | 0.524044 | 7.4:-86974545 | MS.gene97579:CDS |
ACAACTCAACACCAATTTGA+AGG | 0.526704 | 7.4:+86976799 | None:intergenic |
GATGAGTGTGCATGGGCGTA+TGG | 0.544278 | 7.4:-86974412 | MS.gene97579:CDS |
CTTCTCGATGGCAGAATCTG+AGG | 0.553269 | 7.4:-86973659 | MS.gene97579:intron |
CTTATGCGGGTATGCACTCG+TGG | 0.556287 | 7.4:-86975990 | MS.gene97579:CDS |
AACCTAACAATGTGGAAGCT+AGG | 0.560299 | 7.4:-86973633 | MS.gene97579:CDS |
CTGGTAGGTATATGCGCAGA+TGG | 0.563571 | 7.4:+86975737 | None:intergenic |
TTTGATTTCAACTGCAGTAG+GGG | 0.564417 | 7.4:+86975948 | None:intergenic |
TGGACCCTGATGAGTGTGCA+TGG | 0.565820 | 7.4:-86974420 | MS.gene97579:CDS |
CCTACTGCAGTTGAAATCAA+AGG | 0.575018 | 7.4:-86975946 | MS.gene97579:CDS |
AGAATTAACCACTATTGAAG+TGG | 0.577711 | 7.4:+86976074 | None:intergenic |
TGGAGTACTATGGTACTGAC+TGG | 0.594477 | 7.4:-86976830 | MS.gene97579:CDS |
ATGTGCCAAGAGGGATCGAT+TGG | 0.600400 | 7.4:+86973567 | None:intergenic |
ATATCTTCGATCTTGGTGCA+TGG | 0.602662 | 7.4:-86974384 | MS.gene97579:CDS |
TCAAAGCCAATTGGTAACCA+GGG | 0.606301 | 7.4:+86973462 | None:intergenic |
GATTTCAACTGCAGTAGGGG+AGG | 0.609120 | 7.4:+86975951 | None:intergenic |
AAGCCAAGCATGTGCCAAGA+GGG | 0.610975 | 7.4:+86973558 | None:intergenic |
CAACACCAATTTGAAGGTCA+GGG | 0.618299 | 7.4:+86976805 | None:intergenic |
AATTTAGATGCAAATTTACG+TGG | 0.628008 | 7.4:+86975796 | None:intergenic |
ACGCCCATGCACACTCATCA+GGG | 0.632289 | 7.4:+86974416 | None:intergenic |
GGACCCTGATGAGTGTGCAT+GGG | 0.633464 | 7.4:-86974419 | MS.gene97579:CDS |
GAATCCAACCTACCTCTGGT+AGG | 0.638773 | 7.4:+86975722 | None:intergenic |
TCCAAATGATTTGATATGAG+GGG | 0.652975 | 7.4:+86974439 | None:intergenic |
CCTTTAAATGCAATCAACGC+AGG | 0.657031 | 7.4:+86973600 | None:intergenic |
GCCGCTGTTATTCACTACAA+CGG | 0.665629 | 7.4:-86973495 | MS.gene97579:CDS |
GGCGCTGTGGAAACTTGCAG+AGG | 0.674205 | 7.4:-86974517 | MS.gene97579:CDS |
TAAGCCAAGCATGTGCCAAG+AGG | 0.676961 | 7.4:+86973557 | None:intergenic |
ACAACGGCCAGTCAAAACCC+TGG | 0.684054 | 7.4:-86973479 | MS.gene97579:CDS |
TGAGGTCAAACCTAACAATG+TGG | 0.684783 | 7.4:-86973641 | MS.gene97579:CDS |
TTAAATGCAATCAACGCAGG+AGG | 0.696375 | 7.4:+86973603 | None:intergenic |
AGGCAAGGTAAATGGCGCTG+TGG | 0.717361 | 7.4:-86974530 | MS.gene97579:CDS |
GCCGTTGTAGTGAATAACAG+CGG | 0.723408 | 7.4:+86973494 | None:intergenic |
TCTGCGCATATACCTACCAG+AGG | 0.745858 | 7.4:-86975734 | MS.gene97579:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATAAATTTATTGAAACT+TGG | + | chr7.4:86975356-86975375 | None:intergenic | 10.0% |
!! | TCAATAAATTTATATAGCTT+TGG | - | chr7.4:86975360-86975379 | MS.gene97579:intron | 15.0% |
!!! | GGTATTTTTTTTTTTTTTTG+TGG | + | chr7.4:86973910-86973929 | None:intergenic | 15.0% |
!! | AATTACATTCAATAGATACA+TGG | + | chr7.4:86976461-86976480 | None:intergenic | 20.0% |
!! | ATATAAATTCAGACTTACTT+TGG | - | chr7.4:86976030-86976049 | MS.gene97579:CDS | 20.0% |
!! | ATTTGAATAATTGACATACT+TGG | + | chr7.4:86976920-86976939 | None:intergenic | 20.0% |
!! | CAATTGCAAATAAAATTCTT+GGG | - | chr7.4:86974075-86974094 | MS.gene97579:intron | 20.0% |
!! | TCAAGAGTTATAATTGTTAT+TGG | + | chr7.4:86973977-86973996 | None:intergenic | 20.0% |
!! | TTACAGATAAATAGTAATCT+TGG | + | chr7.4:86975021-86975040 | None:intergenic | 20.0% |
!! | TTCAAATAAACAAAAGCAAA+AGG | + | chr7.4:86976130-86976149 | None:intergenic | 20.0% |
!!! | AGTTATAATTGTTATTGGTT+TGG | + | chr7.4:86973972-86973991 | None:intergenic | 20.0% |
!!! | ATACACTTCTTTGTATTTTT+CGG | - | chr7.4:86974825-86974844 | MS.gene97579:intron | 20.0% |
!!! | GATTTTGAAAACAATTTAGA+TGG | + | chr7.4:86976508-86976527 | None:intergenic | 20.0% |
!!! | TATTTGAACAACCATTTTAT+AGG | + | chr7.4:86974751-86974732 | None:intergenic | 20.0% |
!!! | TTTTTCTAAAAACAGCAAAA+TGG | + | chr7.4:86973862-86973881 | None:intergenic | 20.0% |
!!! | TTTTTCTTATTGTCATTTTC+TGG | - | chr7.4:86975629-86975648 | MS.gene97579:intron | 20.0% |
!!! | TTTTTTCTGAAATTGAGATA+GGG | - | chr7.4:86976575-86976594 | MS.gene97579:intron | 20.0% |
! | AAAAGTTCAAATAAATGTGC+AGG | + | chr7.4:86973728-86973747 | None:intergenic | 25.0% |
! | AAAGTTCAAATAAATGTGCA+GGG | + | chr7.4:86973727-86973746 | None:intergenic | 25.0% |
! | AAGCTGTAGAAAATCAAAAT+GGG | - | chr7.4:86974460-86974479 | MS.gene97579:CDS | 25.0% |
! | AATTTAGATGCAAATTTACG+TGG | + | chr7.4:86974543-86974562 | None:intergenic | 25.0% |
! | AGTGTTCGAATAAAAATGAA+TGG | - | chr7.4:86975426-86975445 | MS.gene97579:intron | 25.0% |
! | CTATCATTTATTTCACAAAG+AGG | + | chr7.4:86974895-86974914 | None:intergenic | 25.0% |
! | CTATCTCAATTTCAGAAAAA+AGG | + | chr7.4:86976576-86976595 | None:intergenic | 25.0% |
! | GAATATTGAGAATGTGAAAA+AGG | - | chr7.4:86976819-86976838 | MS.gene97579:CDS | 25.0% |
! | GAGATAAAGTTGTCATAAAA+TGG | + | chr7.4:86974746-86974765 | None:intergenic | 25.0% |
! | GCAATTGCAAATAAAATTCT+TGG | - | chr7.4:86974074-86974093 | MS.gene97579:intron | 25.0% |
! | TATCACAAGAACAAGAATAT+TGG | + | chr7.4:86974103-86974122 | None:intergenic | 25.0% |
! | TGAGTAAAGATATGTACTTT+GGG | + | chr7.4:86974578-86974597 | None:intergenic | 25.0% |
! | TTGAGTAAAGATATGTACTT+TGG | + | chr7.4:86974579-86974598 | None:intergenic | 25.0% |
! | TTTGTGCTGAATATAACATA+GGG | - | chr7.4:86974974-86974993 | MS.gene97579:intron | 25.0% |
!! | CACATTTATTTGAACTTTTG+TGG | - | chr7.4:86973729-86973748 | MS.gene97579:intron | 25.0% |
!! | TTCAACAATAGCATTTTTGA+TGG | - | chr7.4:86975598-86975617 | MS.gene97579:intron | 25.0% |
!! | TTTTGTGCTGAATATAACAT+AGG | - | chr7.4:86974973-86974992 | MS.gene97579:intron | 25.0% |
!!! | CTTTTTTCTGAAATTGAGAT+AGG | - | chr7.4:86976574-86976593 | MS.gene97579:intron | 25.0% |
!!! | TTTTTTTTTTTTTGTGGAGC+TGG | + | chr7.4:86973904-86973923 | None:intergenic | 25.0% |
AAAATGAGAGAACAATTGGT+TGG | - | chr7.4:86976163-86976182 | MS.gene97579:intron | 30.0% | |
AAAGCTGAAACTCTTGAAAA+TGG | - | chr7.4:86973438-86973457 | MS.gene97579:CDS | 30.0% | |
AAGTACTAGTGGAAAGAAAT+AGG | + | chr7.4:86973931-86973950 | None:intergenic | 30.0% | |
ACACAAAATGAGAGAACAAT+TGG | - | chr7.4:86976159-86976178 | MS.gene97579:intron | 30.0% | |
ACATGCTTAATTATGTTCAG+TGG | - | chr7.4:86976202-86976221 | MS.gene97579:intron | 30.0% | |
AGAATTAACCACTATTGAAG+TGG | + | chr7.4:86974265-86974284 | None:intergenic | 30.0% | |
ATAGTTCATGGATATTACAG+GGG | - | chr7.4:86976225-86976244 | MS.gene97579:intron | 30.0% | |
GAAGCTGTAGAAAATCAAAA+TGG | - | chr7.4:86974459-86974478 | MS.gene97579:CDS | 30.0% | |
GAGATATGAAGAAACAAAAC+AGG | + | chr7.4:86974656-86974675 | None:intergenic | 30.0% | |
GATACATGGTGAATATAACA+AGG | + | chr7.4:86976447-86976466 | None:intergenic | 30.0% | |
GATAGTTCATGGATATTACA+GGG | - | chr7.4:86976224-86976243 | MS.gene97579:intron | 30.0% | |
GCACAAAATATTCTGTGAAA+TGG | + | chr7.4:86974961-86974980 | None:intergenic | 30.0% | |
GGTGATGAAAGAGATAAAAA+TGG | + | chr7.4:86973765-86973784 | None:intergenic | 30.0% | |
GTCCAAATGATTTGATATGA+GGG | + | chr7.4:86975901-86975920 | None:intergenic | 30.0% | |
GTTATTGCAGTTCAAATATG+TGG | + | chr7.4:86976486-86976505 | None:intergenic | 30.0% | |
TAAGAGAAACTTATCATTCC+TGG | - | chr7.4:86975988-86976007 | MS.gene97579:CDS | 30.0% | |
TAGAAAATCAAAATGGGATC+AGG | - | chr7.4:86974466-86974485 | MS.gene97579:CDS | 30.0% | |
TATCATGGAAATCATTTAGC+TGG | - | chr7.4:86974495-86974514 | MS.gene97579:CDS | 30.0% | |
TATTGAAACTTGGCCAAAAA+AGG | + | chr7.4:86975346-86975365 | None:intergenic | 30.0% | |
TCAATTTCAGAAAAAAGGAG+AGG | + | chr7.4:86976571-86976590 | None:intergenic | 30.0% | |
TCCAAATGATTTGATATGAG+GGG | + | chr7.4:86975900-86975919 | None:intergenic | 30.0% | |
TCCTACATTTCTCAATGTTA+TGG | - | chr7.4:86973832-86973851 | MS.gene97579:intron | 30.0% | |
TCTAAAAACAGCAAAATGGT+TGG | + | chr7.4:86973858-86973877 | None:intergenic | 30.0% | |
TGAAGTGGCTAAAATGTTAT+CGG | + | chr7.4:86974250-86974269 | None:intergenic | 30.0% | |
! | ATTAAAGTGCAAAGTACTAG+TGG | + | chr7.4:86973942-86973961 | None:intergenic | 30.0% |
! | CATTTTATAGGACAACTTGT+GGG | + | chr7.4:86974855-86974874 | None:intergenic | 30.0% |
! | GGGTAATGTCTAAACATTTT+AGG | - | chr7.4:86975853-86975872 | MS.gene97579:CDS | 30.0% |
! | TATCGGCTGATAGTATAAAA+TGG | + | chr7.4:86974233-86974252 | None:intergenic | 30.0% |
! | TTATCTTCCTTTTCTACTTC+AGG | - | chr7.4:86973798-86973817 | MS.gene97579:intron | 30.0% |
! | TTTTTATCTCTTTCATCACC+AGG | - | chr7.4:86973765-86973784 | MS.gene97579:intron | 30.0% |
!! | TTAACGAATTCAACTTGTTG+TGG | - | chr7.4:86975069-86975088 | MS.gene97579:intron | 30.0% |
!!! | TTGCTGTTTTTAGAAAAAGC+AGG | - | chr7.4:86973864-86973883 | MS.gene97579:intron | 30.0% |
AACCATGTGTAAGTGATAGT+AGG | - | chr7.4:86975158-86975177 | MS.gene97579:intron | 35.0% | |
ACAACTCAACACCAATTTGA+AGG | + | chr7.4:86973540-86973559 | None:intergenic | 35.0% | |
ACCATGTGTAAGTGATAGTA+GGG | - | chr7.4:86975159-86975178 | MS.gene97579:intron | 35.0% | |
ACCGACAAAAAAACTTATGC+GGG | - | chr7.4:86974333-86974352 | MS.gene97579:intron | 35.0% | |
ACTACTCATTAACCATCCAT+TGG | - | chr7.4:86976251-86976270 | MS.gene97579:intron | 35.0% | |
ATTTGCAATTGCTAACAGTG+TGG | + | chr7.4:86974066-86974085 | None:intergenic | 35.0% | |
CAACGAAGTTCATAAGCAAA+AGG | + | chr7.4:86973642-86973661 | None:intergenic | 35.0% | |
CAAGACAACAAAAGGATAGA+GGG | + | chr7.4:86975470-86975489 | None:intergenic | 35.0% | |
CACCGACAAAAAAACTTATG+CGG | - | chr7.4:86974332-86974351 | MS.gene97579:intron | 35.0% | |
CATTTGATGAATTTGAACCC+TGG | + | chr7.4:86974147-86974166 | None:intergenic | 35.0% | |
CCACAAGTTGTCCTATAAAA+TGG | - | chr7.4:86974853-86974872 | MS.gene97579:intron | 35.0% | |
GAAGATAACGAAACAAATCC+TGG | + | chr7.4:86973786-86973805 | None:intergenic | 35.0% | |
GCCATAACATTGAGAAATGT+AGG | + | chr7.4:86973836-86973855 | None:intergenic | 35.0% | |
GGAATGAATATCTTCGATCT+TGG | - | chr7.4:86975945-86975964 | MS.gene97579:CDS | 35.0% | |
GGATAGTTCATGGATATTAC+AGG | - | chr7.4:86976223-86976242 | MS.gene97579:intron | 35.0% | |
GGTCCAAATGATTTGATATG+AGG | + | chr7.4:86975902-86975921 | None:intergenic | 35.0% | |
GTAAGCAAGTTTCTGTGTTT+GGG | - | chr7.4:86973413-86973432 | MS.gene97579:CDS | 35.0% | |
GTCAATGACGTTGAAAATCA+TGG | + | chr7.4:86976287-86976306 | None:intergenic | 35.0% | |
GTCTATTTGAACACCAATCA+TGG | - | chr7.4:86976321-86976340 | MS.gene97579:intron | 35.0% | |
GTGAAAAATTCAGAGACACT+TGG | + | chr7.4:86975113-86975132 | None:intergenic | 35.0% | |
GTTCATGAGGTTCAAAATCT+TGG | - | chr7.4:86976384-86976403 | MS.gene97579:intron | 35.0% | |
GTTGTGGTAAAAGTTGCTAT+GGG | - | chr7.4:86975085-86975104 | MS.gene97579:intron | 35.0% | |
TAGTTCATGGATATTACAGG+GGG | - | chr7.4:86976226-86976245 | MS.gene97579:intron | 35.0% | |
TATGTTCAGTGGATAGTTCA+TGG | - | chr7.4:86976213-86976232 | MS.gene97579:intron | 35.0% | |
TATTACTGACAACTTCTCGA+TGG | - | chr7.4:86976665-86976684 | MS.gene97579:intron | 35.0% | |
TCATGAACTACGACTTTCAA+GGG | + | chr7.4:86976372-86976391 | None:intergenic | 35.0% | |
TCATGGTTAATTGTGTCCAA+TGG | + | chr7.4:86976270-86976289 | None:intergenic | 35.0% | |
TCCCCTCATATCAAATCATT+TGG | - | chr7.4:86975896-86975915 | MS.gene97579:CDS | 35.0% | |
TGAGAAATGTAGGAGATTGA+AGG | + | chr7.4:86973826-86973845 | None:intergenic | 35.0% | |
TGATATCCACTAACCATGAT+TGG | + | chr7.4:86976337-86976356 | None:intergenic | 35.0% | |
TGTAAGCAAGTTTCTGTGTT+TGG | - | chr7.4:86973412-86973431 | MS.gene97579:CDS | 35.0% | |
TGTTGTGGTAAAAGTTGCTA+TGG | - | chr7.4:86975084-86975103 | MS.gene97579:intron | 35.0% | |
TTATCATTCCTGGCTTAAAG+AGG | - | chr7.4:86975998-86976017 | MS.gene97579:CDS | 35.0% | |
TTCAGAAAAAAGGAGAGGAA+GGG | + | chr7.4:86976566-86976585 | None:intergenic | 35.0% | |
TTGACATACTTGGTCCAAAA+TGG | + | chr7.4:86976910-86976929 | None:intergenic | 35.0% | |
TTGACATTCTCTTCGATTAC+TGG | + | chr7.4:86975139-86975158 | None:intergenic | 35.0% | |
TTTCAGAAAAAAGGAGAGGA+AGG | + | chr7.4:86976567-86976586 | None:intergenic | 35.0% | |
TTTGCAATTGCTAACAGTGT+GGG | + | chr7.4:86974065-86974084 | None:intergenic | 35.0% | |
! | AACTTTTACCTCTTTAAGCC+AGG | + | chr7.4:86976009-86976028 | None:intergenic | 35.0% |
! | ACATGCAAGACTATCTTTTC+AGG | + | chr7.4:86974309-86974328 | None:intergenic | 35.0% |
! | CCATTTTATAGGACAACTTG+TGG | + | chr7.4:86974856-86974875 | None:intergenic | 35.0% |
! | CTATCCATGACTGAACTTTT+GGG | + | chr7.4:86974007-86974026 | None:intergenic | 35.0% |
! | CTTTGATTTCAACTGCAGTA+GGG | + | chr7.4:86974392-86974411 | None:intergenic | 35.0% |
! | TCTTGGTTAGTTACATTCAG+CGG | - | chr7.4:86976401-86976420 | MS.gene97579:intron | 35.0% |
! | TTTGATTTCAACTGCAGTAG+GGG | + | chr7.4:86974391-86974410 | None:intergenic | 35.0% |
! | TTTTCAACTTGAGTTCTCTC+TGG | - | chr7.4:86973486-86973505 | MS.gene97579:CDS | 35.0% |
! | TTTTCTACAGCTTCAAGTAC+AGG | + | chr7.4:86974453-86974472 | None:intergenic | 35.0% |
!! | CAATTGGCTTTGAACATCTT+CGG | - | chr7.4:86976884-86976903 | MS.gene97579:intron | 35.0% |
!! | CATTTTAGCCACTTCAATAG+TGG | - | chr7.4:86974254-86974273 | MS.gene97579:intron | 35.0% |
!! | GAGAACTCAAGTTGAAAATC+AGG | + | chr7.4:86973484-86973503 | None:intergenic | 35.0% |
!! | GTAAGAGTTTTCGAGAGTAA+GGG | + | chr7.4:86974208-86974227 | None:intergenic | 35.0% |
!!! | ACCCGCATAAGTTTTTTTGT+CGG | + | chr7.4:86974337-86974356 | None:intergenic | 35.0% |
AAACTTGGCCAAAAAAGGAG+AGG | + | chr7.4:86975341-86975360 | None:intergenic | 40.0% | |
AACCTAACAATGTGGAAGCT+AGG | - | chr7.4:86976703-86976722 | MS.gene97579:intron | 40.0% | |
AAGACTACCTTGTCAAGGTT+TGG | + | chr7.4:86975726-86975745 | None:intergenic | 40.0% | |
AATACTGTTGGGTGGTTAGA+CGG | - | chr7.4:86975187-86975206 | MS.gene97579:intron | 40.0% | |
AATGCCCAAAAGTTCAGTCA+TGG | - | chr7.4:86974000-86974019 | MS.gene97579:intron | 40.0% | |
ACAAAAGGATAGAGGGTAAG+AGG | + | chr7.4:86975463-86975482 | None:intergenic | 40.0% | |
AGACTACCTTGTCAAGGTTT+GGG | + | chr7.4:86975725-86975744 | None:intergenic | 40.0% | |
AGATATGTACTTTGGGCTTC+TGG | + | chr7.4:86974571-86974590 | None:intergenic | 40.0% | |
AGTAAGGGAAGTAACTTTGG+AGG | + | chr7.4:86974193-86974212 | None:intergenic | 40.0% | |
AGTAGGGCAGTTAATACTGT+TGG | - | chr7.4:86975175-86975194 | MS.gene97579:intron | 40.0% | |
AGTTACATTCAGCGGATGAT+CGG | - | chr7.4:86976409-86976428 | MS.gene97579:intron | 40.0% | |
CAACACCAATTTGAAGGTCA+GGG | + | chr7.4:86973534-86973553 | None:intergenic | 40.0% | |
CATAGGGATGAGTGATTAAC+TGG | - | chr7.4:86974990-86975009 | MS.gene97579:intron | 40.0% | |
CCAAAAAGACTACCTTGTCA+AGG | + | chr7.4:86975731-86975750 | None:intergenic | 40.0% | |
CCAAAAGTTCAGTCATGGAT+AGG | - | chr7.4:86974005-86974024 | MS.gene97579:intron | 40.0% | |
CCAAGACAACAAAAGGATAG+AGG | + | chr7.4:86975471-86975490 | None:intergenic | 40.0% | |
CCTACTGCAGTTGAAATCAA+AGG | - | chr7.4:86974390-86974409 | MS.gene97579:CDS | 40.0% | |
CCTTTAAATGCAATCAACGC+AGG | + | chr7.4:86976739-86976758 | None:intergenic | 40.0% | |
CGAAGATGTTCAAAGCCAAT+TGG | + | chr7.4:86976886-86976905 | None:intergenic | 40.0% | |
CGGCTGATAGTATAAAATGG+TGG | + | chr7.4:86974230-86974249 | None:intergenic | 40.0% | |
CTACATGCCAAGACAACAAA+AGG | + | chr7.4:86975478-86975497 | None:intergenic | 40.0% | |
CTCATGAACTACGACTTTCA+AGG | + | chr7.4:86976373-86976392 | None:intergenic | 40.0% | |
CTCTAGTCAACCATTCAAAC+TGG | + | chr7.4:86974422-86974441 | None:intergenic | 40.0% | |
CTGAAATTGAGATAGGGTGA+TGG | - | chr7.4:86976581-86976600 | MS.gene97579:intron | 40.0% | |
CTTGAAAGTCGTAGTTCATG+AGG | - | chr7.4:86976371-86976390 | MS.gene97579:intron | 40.0% | |
GAGAGTAAGGGAAGTAACTT+TGG | + | chr7.4:86974196-86974215 | None:intergenic | 40.0% | |
GGGATCAGGAATTACTATCA+TGG | - | chr7.4:86974480-86974499 | MS.gene97579:CDS | 40.0% | |
GGTTAATTGTGTCCAATGGA+TGG | + | chr7.4:86976266-86976285 | None:intergenic | 40.0% | |
GTAGGGCAGTTAATACTGTT+GGG | - | chr7.4:86975176-86975195 | MS.gene97579:intron | 40.0% | |
TCAAAACCCTGGTTACCAAT+TGG | - | chr7.4:86976868-86976887 | MS.gene97579:intron | 40.0% | |
TCAACACCAATTTGAAGGTC+AGG | + | chr7.4:86973535-86973554 | None:intergenic | 40.0% | |
TCGTGACCAAAAGAAAGATG+CGG | + | chr7.4:86973678-86973697 | None:intergenic | 40.0% | |
TGAACACCAATCATGGTTAG+TGG | - | chr7.4:86976328-86976347 | MS.gene97579:intron | 40.0% | |
TGAGGTCAAACCTAACAATG+TGG | - | chr7.4:86976695-86976714 | MS.gene97579:intron | 40.0% | |
TGATAAACCATGAATGCGCA+CGG | - | chr7.4:86974118-86974137 | MS.gene97579:intron | 40.0% | |
TGGACTCGATTCACTAAGAT+TGG | + | chr7.4:86974523-86974542 | None:intergenic | 40.0% | |
TTAAATGCAATCAACGCAGG+AGG | + | chr7.4:86976736-86976755 | None:intergenic | 40.0% | |
TTCCTAGCTTCCACATTGTT+AGG | + | chr7.4:86976708-86976727 | None:intergenic | 40.0% | |
TTGCAGAGGAGAAGATGATT+GGG | - | chr7.4:86975833-86975852 | MS.gene97579:CDS | 40.0% | |
! | AAATTGAGATAGGGTGATGG+AGG | - | chr7.4:86976584-86976603 | MS.gene97579:intron | 40.0% |
! | AAGGCATTCACCAGTTTGAA+TGG | - | chr7.4:86974409-86974428 | MS.gene97579:CDS | 40.0% |
! | AGTCTTTTTGGACGATGATG+TGG | - | chr7.4:86975740-86975759 | MS.gene97579:CDS | 40.0% |
! | ATATCTTCGATCTTGGTGCA+TGG | - | chr7.4:86975952-86975971 | MS.gene97579:CDS | 40.0% |
! | CCTATCCATGACTGAACTTT+TGG | + | chr7.4:86974008-86974027 | None:intergenic | 40.0% |
! | CCTTGACAAGGTAGTCTTTT+TGG | - | chr7.4:86975728-86975747 | MS.gene97579:intron | 40.0% |
! | CCTTTGATTTCAACTGCAGT+AGG | + | chr7.4:86974393-86974412 | None:intergenic | 40.0% |
! | CTTTGGGAAATTGACCTTGA+AGG | - | chr7.4:86975786-86975805 | MS.gene97579:CDS | 40.0% |
! | GGAGAGGATGCTTCTTTTAA+AGG | + | chr7.4:86975325-86975344 | None:intergenic | 40.0% |
! | TCAAAGCCAATTGGTAACCA+GGG | + | chr7.4:86976877-86976896 | None:intergenic | 40.0% |
! | TCTCTTCCGCATCTTTCTTT+TGG | - | chr7.4:86973669-86973688 | MS.gene97579:intron | 40.0% |
! | TTCAAAGCCAATTGGTAACC+AGG | + | chr7.4:86976878-86976897 | None:intergenic | 40.0% |
! | TTGAACATCTTCGGCCATTT+TGG | - | chr7.4:86976893-86976912 | MS.gene97579:intron | 40.0% |
!! | AAGGATCAAGTTGAGAATGC+AGG | + | chr7.4:86973623-86973642 | None:intergenic | 40.0% |
!! | CCTCTATCCTTTTGTTGTCT+TGG | - | chr7.4:86975468-86975487 | MS.gene97579:intron | 40.0% |
!! | CCTGCGTTGATTGCATTTAA+AGG | - | chr7.4:86976736-86976755 | MS.gene97579:intron | 40.0% |
!! | GGTAAGAGTTTTCGAGAGTA+AGG | + | chr7.4:86974209-86974228 | None:intergenic | 40.0% |
!!! | AGAAGCATCCTCTCCTTTTT+TGG | - | chr7.4:86975330-86975349 | MS.gene97579:intron | 40.0% |
AAATAGACACCCGAAAGTCG+TGG | + | chr7.4:86976309-86976328 | None:intergenic | 45.0% | |
ACGTCATTGACCACGACTTT+CGG | - | chr7.4:86976296-86976315 | MS.gene97579:intron | 45.0% | |
AGTTGAATCCAACCTACCTC+TGG | + | chr7.4:86974621-86974640 | None:intergenic | 45.0% | |
ATACTGTTGGGTGGTTAGAC+GGG | - | chr7.4:86975188-86975207 | MS.gene97579:intron | 45.0% | |
CTTGCAGAGGAGAAGATGAT+TGG | - | chr7.4:86975832-86975851 | MS.gene97579:CDS | 45.0% | |
GAAGGAGCCTGAAGTAGAAA+AGG | + | chr7.4:86973808-86973827 | None:intergenic | 45.0% | |
GACCTTGAAGGCAAGGTAAA+TGG | - | chr7.4:86975798-86975817 | MS.gene97579:CDS | 45.0% | |
GCCCTACTATCACTTACACA+TGG | + | chr7.4:86975163-86975182 | None:intergenic | 45.0% | |
GCCGCTGTTATTCACTACAA+CGG | - | chr7.4:86976841-86976860 | MS.gene97579:CDS | 45.0% | |
GCCGTTGTAGTGAATAACAG+CGG | + | chr7.4:86976845-86976864 | None:intergenic | 45.0% | |
GGAAATTGACCTTGAAGGCA+AGG | - | chr7.4:86975791-86975810 | MS.gene97579:CDS | 45.0% | |
TAGACGGGTGAAAGAGATAG+TGG | - | chr7.4:86975203-86975222 | MS.gene97579:intron | 45.0% | |
TATACCTACCAGAGGTAGGT+TGG | - | chr7.4:86974610-86974629 | MS.gene97579:CDS | 45.0% | |
TGATGGAGGTTGGAAAGTCT+TGG | - | chr7.4:86976598-86976617 | MS.gene97579:intron | 45.0% | |
TTCATCCAATCGATCCCTCT+TGG | - | chr7.4:86976764-86976783 | MS.gene97579:intron | 45.0% | |
! | GCTTTTCCCAAACCTTGACA+AGG | - | chr7.4:86975716-86975735 | MS.gene97579:intron | 45.0% |
! | GGTGAAAGAGATAGTGGCAA+GGG | - | chr7.4:86975209-86975228 | MS.gene97579:intron | 45.0% |
!! | GAGTTCTCTCTGGAGTACTA+TGG | - | chr7.4:86973496-86973515 | MS.gene97579:CDS | 45.0% |
!! | TGGAGTACTATGGTACTGAC+TGG | - | chr7.4:86973506-86973525 | MS.gene97579:CDS | 45.0% |
!! | TTGGTAACCAGGGTTTTGAC+TGG | + | chr7.4:86976867-86976886 | None:intergenic | 45.0% |
!! | TTTCAGGTTTCAGAGCTGAC+TGG | + | chr7.4:86974293-86974312 | None:intergenic | 45.0% |
!!! | TATCAAAATTTTTAAATTAT+TGG | - | chr7.4:86976097-86976116 | MS.gene97579:intron | 5.0% |
AACGCGACTTGTCTGCACTT+TGG | - | chr7.4:86975769-86975788 | MS.gene97579:CDS | 50.0% | |
AAGCCAAGCATGTGCCAAGA+GGG | + | chr7.4:86976781-86976800 | None:intergenic | 50.0% | |
ACGCGACTTGTCTGCACTTT+GGG | - | chr7.4:86975770-86975789 | MS.gene97579:CDS | 50.0% | |
ATGAATGCGCACGGAAACCA+GGG | - | chr7.4:86974127-86974146 | MS.gene97579:intron | 50.0% | |
ATGCAATCAACGCAGGAGGT+AGG | + | chr7.4:86976732-86976751 | None:intergenic | 50.0% | |
ATGTGCCAAGAGGGATCGAT+TGG | + | chr7.4:86976772-86976791 | None:intergenic | 50.0% | |
CGCATATACCTACCAGAGGT+AGG | - | chr7.4:86974606-86974625 | MS.gene97579:CDS | 50.0% | |
CGCCATTTACCTTGCCTTCA+AGG | + | chr7.4:86975803-86975822 | None:intergenic | 50.0% | |
CGTCATTGACCACGACTTTC+GGG | - | chr7.4:86976297-86976316 | MS.gene97579:intron | 50.0% | |
CTGGTAGGTATATGCGCAGA+TGG | + | chr7.4:86974602-86974621 | None:intergenic | 50.0% | |
CTTCTCGATGGCAGAATCTG+AGG | - | chr7.4:86976677-86976696 | MS.gene97579:intron | 50.0% | |
GAATCCAACCTACCTCTGGT+AGG | + | chr7.4:86974617-86974636 | None:intergenic | 50.0% | |
GATTTCAACTGCAGTAGGGG+AGG | + | chr7.4:86974388-86974407 | None:intergenic | 50.0% | |
GGAGGTTGGAAAGTCTTGGT+TGG | - | chr7.4:86976602-86976621 | MS.gene97579:intron | 50.0% | |
GGGCAGTTAATACTGTTGGG+TGG | - | chr7.4:86975179-86975198 | MS.gene97579:intron | 50.0% | |
TAAGCCAAGCATGTGCCAAG+AGG | + | chr7.4:86976782-86976801 | None:intergenic | 50.0% | |
TCTGCGCATATACCTACCAG+AGG | - | chr7.4:86974602-86974621 | MS.gene97579:CDS | 50.0% | |
TCTTGGCACATGCTTGGCTT+AGG | - | chr7.4:86976781-86976800 | MS.gene97579:intron | 50.0% | |
TGCAATCAACGCAGGAGGTA+GGG | + | chr7.4:86976731-86976750 | None:intergenic | 50.0% | |
TGGAGCCCTGACCTTCAAAT+TGG | - | chr7.4:86973526-86973545 | MS.gene97579:CDS | 50.0% | |
! | GGGTGAAAGAGATAGTGGCA+AGG | - | chr7.4:86975208-86975227 | MS.gene97579:intron | 50.0% |
!! | TGAGATAGGGTGATGGAGGT+TGG | - | chr7.4:86976588-86976607 | MS.gene97579:intron | 50.0% |
ACAACGGCCAGTCAAAACCC+TGG | - | chr7.4:86976857-86976876 | MS.gene97579:CDS | 55.0% | |
ACGCCCATGCACACTCATCA+GGG | + | chr7.4:86975923-86975942 | None:intergenic | 55.0% | |
AGGCAAGGTAAATGGCGCTG+TGG | - | chr7.4:86975806-86975825 | MS.gene97579:CDS | 55.0% | |
CATGAATGCGCACGGAAACC+AGG | - | chr7.4:86974126-86974145 | MS.gene97579:intron | 55.0% | |
CTGGTTTCCGTGCGCATTCA+TGG | + | chr7.4:86974128-86974147 | None:intergenic | 55.0% | |
CTTATGCGGGTATGCACTCG+TGG | - | chr7.4:86974346-86974365 | MS.gene97579:CDS | 55.0% | |
GATCCCTCTTGGCACATGCT+TGG | - | chr7.4:86976775-86976794 | MS.gene97579:intron | 55.0% | |
GATGAGTGTGCATGGGCGTA+TGG | - | chr7.4:86975924-86975943 | MS.gene97579:CDS | 55.0% | |
GGACCCTGATGAGTGTGCAT+GGG | - | chr7.4:86975917-86975936 | MS.gene97579:CDS | 55.0% | |
TACGCCCATGCACACTCATC+AGG | + | chr7.4:86975924-86975943 | None:intergenic | 55.0% | |
TGGACCCTGATGAGTGTGCA+TGG | - | chr7.4:86975916-86975935 | MS.gene97579:CDS | 55.0% | |
GGCGCTGTGGAAACTTGCAG+AGG | - | chr7.4:86975819-86975838 | MS.gene97579:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 86973383 | 86976975 | 86973383 | ID=MS.gene97579 |
chr7.4 | mRNA | 86973383 | 86976975 | 86973383 | ID=MS.gene97579.t1;Parent=MS.gene97579 |
chr7.4 | exon | 86976973 | 86976975 | 86976973 | ID=MS.gene97579.t1.exon1;Parent=MS.gene97579.t1 |
chr7.4 | CDS | 86976973 | 86976975 | 86976973 | ID=cds.MS.gene97579.t1;Parent=MS.gene97579.t1 |
chr7.4 | exon | 86976811 | 86976880 | 86976811 | ID=MS.gene97579.t1.exon2;Parent=MS.gene97579.t1 |
chr7.4 | CDS | 86976811 | 86976880 | 86976811 | ID=cds.MS.gene97579.t1;Parent=MS.gene97579.t1 |
chr7.4 | exon | 86976473 | 86976571 | 86976473 | ID=MS.gene97579.t1.exon3;Parent=MS.gene97579.t1 |
chr7.4 | CDS | 86976473 | 86976571 | 86976473 | ID=cds.MS.gene97579.t1;Parent=MS.gene97579.t1 |
chr7.4 | exon | 86975735 | 86976111 | 86975735 | ID=MS.gene97579.t1.exon4;Parent=MS.gene97579.t1 |
chr7.4 | CDS | 86975735 | 86976111 | 86975735 | ID=cds.MS.gene97579.t1;Parent=MS.gene97579.t1 |
chr7.4 | exon | 86974339 | 86974641 | 86974339 | ID=MS.gene97579.t1.exon5;Parent=MS.gene97579.t1 |
chr7.4 | CDS | 86974339 | 86974641 | 86974339 | ID=cds.MS.gene97579.t1;Parent=MS.gene97579.t1 |
chr7.4 | exon | 86973383 | 86973667 | 86973383 | ID=MS.gene97579.t1.exon6;Parent=MS.gene97579.t1 |
chr7.4 | CDS | 86973383 | 86973667 | 86973383 | ID=cds.MS.gene97579.t1;Parent=MS.gene97579.t1 |
Gene Sequence |
Protein sequence |