Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97986.t1 | XP_003595493.2 | 95.1 | 637 | 29 | 1 | 1 | 637 | 1 | 635 | 0.00E+00 | 1124.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97986.t1 | Q93YU8 | 29.5 | 441 | 295 | 4 | 208 | 635 | 355 | 792 | 8.8e-47 | 189.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97986.t1 | G7IGH9 | 95.1 | 637 | 29 | 1 | 1 | 637 | 1 | 635 | 0.0e+00 | 1124.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050790 | MS.gene97986 | 0.809648 | 1.71E-50 | -1.69E-46 |
MS.gene050904 | MS.gene97986 | -0.809336 | 1.99E-50 | -1.69E-46 |
MS.gene053108 | MS.gene97986 | 0.818167 | 2.26E-52 | -1.69E-46 |
MS.gene056583 | MS.gene97986 | 0.804466 | 2.13E-49 | -1.69E-46 |
MS.gene056618 | MS.gene97986 | 0.845898 | 3.05E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97986.t1 | MTR_2g048360 | 95.133 | 637 | 29 | 1 | 1 | 637 | 1 | 635 | 0.0 | 1161 |
MS.gene97986.t1 | MTR_5g022530 | 34.598 | 448 | 275 | 8 | 199 | 635 | 195 | 635 | 1.38e-67 | 233 |
MS.gene97986.t1 | MTR_7g081705 | 32.579 | 442 | 277 | 9 | 208 | 635 | 405 | 839 | 9.70e-57 | 206 |
MS.gene97986.t1 | MTR_8g006850 | 31.320 | 447 | 284 | 7 | 208 | 635 | 277 | 719 | 6.77e-51 | 188 |
MS.gene97986.t1 | MTR_3g109450 | 29.336 | 467 | 297 | 10 | 188 | 633 | 248 | 702 | 1.21e-45 | 173 |
MS.gene97986.t1 | MTR_2g102050 | 27.962 | 422 | 283 | 7 | 213 | 621 | 325 | 738 | 3.30e-37 | 148 |
MS.gene97986.t1 | MTR_1g112850 | 26.949 | 449 | 292 | 10 | 207 | 626 | 273 | 714 | 9.21e-34 | 137 |
MS.gene97986.t1 | MTR_4g012430 | 28.655 | 342 | 223 | 7 | 213 | 546 | 128 | 456 | 2.40e-31 | 128 |
MS.gene97986.t1 | MTR_3g088190 | 25.966 | 466 | 293 | 11 | 208 | 636 | 454 | 904 | 1.01e-27 | 119 |
MS.gene97986.t1 | MTR_4g127620 | 24.786 | 351 | 234 | 8 | 196 | 525 | 323 | 664 | 4.12e-25 | 111 |
MS.gene97986.t1 | MTR_8g091250 | 31.048 | 248 | 153 | 5 | 293 | 529 | 382 | 622 | 5.17e-25 | 110 |
MS.gene97986.t1 | MTR_5g098980 | 30.855 | 269 | 169 | 4 | 297 | 552 | 438 | 702 | 2.16e-24 | 108 |
MS.gene97986.t1 | MTR_5g087740 | 30.417 | 240 | 151 | 4 | 293 | 520 | 428 | 663 | 8.42e-24 | 107 |
MS.gene97986.t1 | MTR_3g078830 | 30.833 | 240 | 150 | 4 | 293 | 520 | 444 | 679 | 9.12e-24 | 107 |
MS.gene97986.t1 | MTR_2g036920 | 26.944 | 360 | 215 | 10 | 201 | 524 | 467 | 814 | 9.39e-22 | 100 |
MS.gene97986.t1 | MTR_2g036920 | 26.944 | 360 | 215 | 10 | 201 | 524 | 496 | 843 | 1.14e-21 | 100 |
MS.gene97986.t1 | MTR_3g115120 | 23.362 | 351 | 233 | 7 | 296 | 637 | 362 | 685 | 2.30e-19 | 92.8 |
MS.gene97986.t1 | MTR_3g096950 | 26.978 | 278 | 184 | 6 | 259 | 523 | 390 | 661 | 5.58e-13 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97986.t1 | AT2G34670 | 42.637 | 713 | 296 | 17 | 1 | 635 | 1 | 678 | 7.19e-149 | 447 |
MS.gene97986.t1 | AT2G34670 | 43.130 | 575 | 217 | 16 | 1 | 500 | 1 | 540 | 1.93e-113 | 351 |
MS.gene97986.t1 | AT3G51290 | 34.234 | 444 | 276 | 5 | 199 | 635 | 191 | 625 | 7.06e-72 | 244 |
MS.gene97986.t1 | AT3G51290 | 34.234 | 444 | 276 | 5 | 199 | 635 | 191 | 625 | 4.76e-71 | 245 |
MS.gene97986.t1 | AT3G51290 | 33.333 | 444 | 274 | 6 | 199 | 635 | 191 | 619 | 1.59e-66 | 229 |
MS.gene97986.t1 | AT1G02110 | 31.837 | 490 | 311 | 8 | 158 | 635 | 221 | 699 | 6.48e-59 | 210 |
MS.gene97986.t1 | AT3G60320 | 28.798 | 441 | 298 | 4 | 208 | 635 | 355 | 792 | 3.19e-48 | 181 |
MS.gene97986.t1 | AT1G52320 | 27.626 | 438 | 289 | 9 | 210 | 631 | 25 | 450 | 1.69e-39 | 151 |
MS.gene97986.t1 | AT1G52320 | 27.626 | 438 | 289 | 9 | 210 | 631 | 25 | 450 | 1.69e-39 | 151 |
MS.gene97986.t1 | AT1G52320 | 27.064 | 436 | 294 | 7 | 210 | 631 | 328 | 753 | 3.89e-39 | 154 |
MS.gene97986.t1 | AT1G52320 | 27.064 | 436 | 294 | 7 | 210 | 631 | 351 | 776 | 4.34e-39 | 154 |
MS.gene97986.t1 | AT1G52320 | 27.064 | 436 | 294 | 7 | 210 | 631 | 351 | 776 | 4.34e-39 | 154 |
MS.gene97986.t1 | AT5G25590 | 27.397 | 438 | 292 | 8 | 210 | 631 | 331 | 758 | 4.01e-37 | 148 |
MS.gene97986.t1 | AT1G77500 | 31.054 | 351 | 204 | 7 | 208 | 532 | 449 | 787 | 5.34e-31 | 129 |
MS.gene97986.t1 | AT1G21740 | 25.761 | 493 | 303 | 11 | 187 | 637 | 476 | 947 | 7.56e-29 | 123 |
MS.gene97986.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 5.42e-27 | 117 |
MS.gene97986.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 5.42e-27 | 117 |
MS.gene97986.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 6.04e-27 | 117 |
MS.gene97986.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 6.04e-27 | 117 |
MS.gene97986.t1 | AT2G27090 | 33.074 | 257 | 151 | 6 | 293 | 536 | 424 | 672 | 8.21e-26 | 113 |
MS.gene97986.t1 | AT2G27090 | 33.074 | 257 | 151 | 6 | 293 | 536 | 424 | 672 | 8.21e-26 | 113 |
MS.gene97986.t1 | AT2G17110 | 28.723 | 376 | 215 | 12 | 213 | 553 | 314 | 671 | 1.85e-23 | 105 |
MS.gene97986.t1 | AT4G39790 | 27.897 | 233 | 152 | 3 | 293 | 513 | 371 | 599 | 3.76e-20 | 95.5 |
MS.gene97986.t1 | AT4G30130 | 29.032 | 248 | 158 | 4 | 293 | 524 | 397 | 642 | 1.45e-17 | 87.4 |
MS.gene97986.t1 | AT4G30130 | 29.032 | 248 | 158 | 4 | 293 | 524 | 397 | 642 | 1.45e-17 | 87.4 |
MS.gene97986.t1 | AT1G20530 | 27.473 | 273 | 170 | 8 | 297 | 552 | 310 | 571 | 9.65e-17 | 84.3 |
MS.gene97986.t1 | AT2G19090 | 27.626 | 257 | 152 | 4 | 293 | 524 | 478 | 725 | 2.78e-16 | 83.2 |
MS.gene97986.t1 | AT5G54480 | 22.932 | 266 | 169 | 7 | 298 | 548 | 401 | 645 | 1.93e-11 | 67.8 |
Find 151 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTTCCACTTGCTTCTTTA+AGG | 0.121977 | 2.3:-42657077 | None:intergenic |
TGAAACAACTTCATCCATTT+TGG | 0.154541 | 2.3:+42656098 | MS.gene97986:CDS |
TTATACACGCTGAGGCTTTC+AGG | 0.162797 | 2.3:-42653014 | None:intergenic |
TCGATCAAATGTTGAGAAAT+TGG | 0.186597 | 2.3:+42656041 | MS.gene97986:CDS |
CTCGGCCTGTTGAGCAATTA+TGG | 0.187743 | 2.3:-42656885 | None:intergenic |
AAGTGTGAAAGCAGATTATT+TGG | 0.231735 | 2.3:+42657096 | MS.gene97986:CDS |
CTTCCTCTCAAACTCCAATT+TGG | 0.258099 | 2.3:-42655959 | None:intergenic |
GGTGGGGAAGGCGGGGCTTC+AGG | 0.269177 | 2.3:-42652562 | None:intergenic |
CAGTGGGAGCTTGGGCTTGA+TGG | 0.280020 | 2.3:+42656590 | MS.gene97986:CDS |
CGCTTTCAAATAAGCTAATA+AGG | 0.286610 | 2.3:-42652461 | None:intergenic |
TTCATCCTCAAATTCAGTTT+TGG | 0.303718 | 2.3:-42652794 | None:intergenic |
CTTCTTTAAGGCTTCTGTTT+CGG | 0.308008 | 2.3:-42657065 | None:intergenic |
AGTCGTTTGAGGAGGAGAAT+TGG | 0.309003 | 2.3:+42652764 | MS.gene97986:CDS |
TTGAGAGTGAGGCTTCTTAT+TGG | 0.311587 | 2.3:+42656432 | MS.gene97986:CDS |
GTCGTTTGAGGAGGAGAATT+GGG | 0.314868 | 2.3:+42652765 | MS.gene97986:CDS |
TTCATCTATAAGTTCCAAAA+TGG | 0.322487 | 2.3:-42656112 | None:intergenic |
ACTCTTCTGCGGCAGAATTC+TGG | 0.331983 | 2.3:+42653075 | MS.gene97986:CDS |
AATCAGGCGGTGGGGAAGGC+GGG | 0.342529 | 2.3:-42652570 | None:intergenic |
TTACATCAGCTTCTGAATCT+TGG | 0.353547 | 2.3:-42652819 | None:intergenic |
ATCAGGCGGTGGGGAAGGCG+GGG | 0.356632 | 2.3:-42652569 | None:intergenic |
AGAAAACTCGGCGTCATCTT+TGG | 0.357338 | 2.3:-42654026 | None:intergenic |
GAATTAGACTTTGCCTCTAC+TGG | 0.357502 | 2.3:+42652535 | MS.gene97986:CDS |
GCTAAATACCCTTGCAGAAC+TGG | 0.365688 | 2.3:-42653963 | None:intergenic |
AAATCAGGCGGTGGGGAAGG+CGG | 0.369631 | 2.3:-42652571 | None:intergenic |
AGAGGGTGAGGACATTGATT+TGG | 0.376255 | 2.3:+42656002 | MS.gene97986:CDS |
TTTATGAAATAGCGGATGCC+TGG | 0.385105 | 2.3:-42657038 | None:intergenic |
CGGCAGTTAATGCAACCAAC+TGG | 0.389360 | 2.3:-42656146 | None:intergenic |
GAAAGCCTCAGCGTGTATAA+AGG | 0.389967 | 2.3:+42653017 | MS.gene97986:CDS |
AGCGGTGGAGGTAGCAAATC+AGG | 0.390403 | 2.3:-42652586 | None:intergenic |
ATCTGTGAACAGTGGGAGCT+TGG | 0.397020 | 2.3:+42656581 | MS.gene97986:CDS |
ACGTTCCATAATTGCTCAAC+AGG | 0.401754 | 2.3:+42656880 | MS.gene97986:CDS |
GGAGGAGGGAATTACCAAAT+TGG | 0.413638 | 2.3:+42655945 | MS.gene97986:intron |
CACTGAGGTTACTCAGCTGC+TGG | 0.417437 | 2.3:-42656349 | None:intergenic |
AGAAGTTGTAGAGTCGTTTG+AGG | 0.425062 | 2.3:+42652753 | MS.gene97986:CDS |
CGCTTTCATTGCCATTCCTT+AGG | 0.430652 | 2.3:-42656535 | None:intergenic |
CATCTGCTGCAAATTGATCA+AGG | 0.433756 | 2.3:+42652691 | MS.gene97986:CDS |
TCTGTGAACAGTGGGAGCTT+GGG | 0.453467 | 2.3:+42656582 | MS.gene97986:CDS |
AGGGTAAGAAGTACCTTATC+TGG | 0.459508 | 2.3:-42656617 | None:intergenic |
AATCGCAACAAGAGTATGTA+AGG | 0.460182 | 2.3:+42656480 | MS.gene97986:CDS |
GGGAAGGCGGGGCTTCAGGC+AGG | 0.460760 | 2.3:-42652558 | None:intergenic |
AGCAAATCAGGCGGTGGGGA+AGG | 0.466793 | 2.3:-42652574 | None:intergenic |
CAATGAGCTCCCGGCCTGCA+TGG | 0.466880 | 2.3:-42654061 | None:intergenic |
AAAGCTATTCCCGTGATGAT+TGG | 0.468773 | 2.3:+42652940 | MS.gene97986:CDS |
AGAAAAGGAGGCAGCGGTGG+AGG | 0.469566 | 2.3:-42652598 | None:intergenic |
ATCACGTAGCGGGAAGCAAC+CGG | 0.469892 | 2.3:+42652852 | MS.gene97986:CDS |
AGTGGGAGCTTGGGCTTGAT+GGG | 0.470747 | 2.3:+42656591 | MS.gene97986:CDS |
TCATCAACTGGTTCTTTGAC+CGG | 0.480247 | 2.3:-42652871 | None:intergenic |
CCCGGCCTGCATGGTTCACT+AGG | 0.481968 | 2.3:-42654052 | None:intergenic |
GGGTATTTAGCGTACTATCA+TGG | 0.482670 | 2.3:+42653975 | MS.gene97986:CDS |
TTTGAAGATGAGGGTGATGA+AGG | 0.485921 | 2.3:+42657004 | MS.gene97986:CDS |
GCAGAGGAACTATCATCAAC+TGG | 0.489604 | 2.3:-42652883 | None:intergenic |
GAAACTTTACAAGGCAGTAA+AGG | 0.489711 | 2.3:+42654117 | MS.gene97986:CDS |
CAGTTGGTTGCATTAACTGC+CGG | 0.490052 | 2.3:+42656147 | MS.gene97986:CDS |
AGTTGTAGAGTCGTTTGAGG+AGG | 0.494301 | 2.3:+42652756 | MS.gene97986:CDS |
ACATCTCTTCGTGTCACTGA+TGG | 0.494531 | 2.3:+42657174 | MS.gene97986:CDS |
TTATGAAATAGCGGATGCCT+GGG | 0.495642 | 2.3:-42657037 | None:intergenic |
CCTAGTGAACCATGCAGGCC+GGG | 0.499393 | 2.3:+42654052 | MS.gene97986:CDS |
GAGGTAGCAAATCAGGCGGT+GGG | 0.502476 | 2.3:-42652579 | None:intergenic |
TCCTAGTGAACCATGCAGGC+CGG | 0.503939 | 2.3:+42654051 | MS.gene97986:CDS |
TGCTTCCTCTCAAGCAATTG+AGG | 0.505979 | 2.3:+42657207 | MS.gene97986:CDS |
GCTTGATGGGTTACCAGATA+AGG | 0.507842 | 2.3:+42656604 | MS.gene97986:CDS |
AATAGCCTCAATTGCTTGAG+AGG | 0.509454 | 2.3:-42657212 | None:intergenic |
AGAAACCAAAACTGAATTTG+AGG | 0.510649 | 2.3:+42652789 | MS.gene97986:CDS |
GCGGAGGTGCTCGAAGTCCC+TGG | 0.515708 | 2.3:+42656952 | MS.gene97986:CDS |
AAAGTCTAATTCTAATGTAT+CGG | 0.518544 | 2.3:-42652524 | None:intergenic |
TACAATTCAGTTTGAGAGTG+AGG | 0.520111 | 2.3:+42656421 | MS.gene97986:CDS |
TTGAGCAATTATGGAACGTA+TGG | 0.520980 | 2.3:-42656876 | None:intergenic |
TGAACTAAACTTTGAAGATG+AGG | 0.521842 | 2.3:+42656994 | MS.gene97986:CDS |
ATTGCCATTCCTTAGGCAGT+TGG | 0.523231 | 2.3:-42656528 | None:intergenic |
AGTTGGTTGCATTAACTGCC+GGG | 0.528298 | 2.3:+42656148 | MS.gene97986:CDS |
GGAGGTAGCAAATCAGGCGG+TGG | 0.529199 | 2.3:-42652580 | None:intergenic |
TTCAGCTTACCAACTGCCTA+AGG | 0.530755 | 2.3:+42656519 | MS.gene97986:CDS |
CCGTGATGATTGGTAGAAGC+GGG | 0.533019 | 2.3:+42652950 | MS.gene97986:CDS |
GCAAGAAAAGGAGGCAGCGG+TGG | 0.533171 | 2.3:-42652601 | None:intergenic |
CAAGTATTGATGAGAATGGA+AGG | 0.533499 | 2.3:+42652368 | MS.gene97986:CDS |
ATCGTTGCTATTTCAACCTG+TGG | 0.535495 | 2.3:+42652723 | MS.gene97986:CDS |
CAGAATTCAGAATTGTATTG+TGG | 0.537342 | 2.3:-42656376 | None:intergenic |
GGCAGTTAATGCAACCAACT+GGG | 0.539937 | 2.3:-42656145 | None:intergenic |
ACAACTTCTACTTTATCCAC+AGG | 0.542390 | 2.3:-42652739 | None:intergenic |
GGCTTCAGGCAGGCCAGTAG+AGG | 0.542481 | 2.3:-42652548 | None:intergenic |
ATGTAAGGACCCTCAGTAAG+TGG | 0.544051 | 2.3:+42656495 | MS.gene97986:CDS |
ATTGATGAGAATGGAAGGGT+TGG | 0.549449 | 2.3:+42652373 | MS.gene97986:CDS |
GTGTGGGAAGATCACGTAGC+GGG | 0.550776 | 2.3:+42652842 | MS.gene97986:CDS |
ACAGTTAGTTTGTAATAGAG+AGG | 0.552074 | 2.3:+42652426 | MS.gene97986:CDS |
TTCAGAAGCTGATGTAAGTG+TGG | 0.554428 | 2.3:+42652825 | MS.gene97986:CDS |
CAAATAAGCTAATAAGGCAT+CGG | 0.555514 | 2.3:-42652455 | None:intergenic |
GCATGGATGCCATCAGTCGC+AGG | 0.557421 | 2.3:+42656316 | MS.gene97986:CDS |
CATAATTGCTCAACAGGCCG+AGG | 0.562768 | 2.3:+42656886 | MS.gene97986:CDS |
CTAGTCCTAGTGAACCATGC+AGG | 0.563303 | 2.3:+42654047 | MS.gene97986:CDS |
AATGAAATACTAGAGAATGA+TGG | 0.563894 | 2.3:+42652652 | MS.gene97986:CDS |
GGCGTCATCTTTGGTGAACG+TGG | 0.564520 | 2.3:-42654017 | None:intergenic |
TAATTCTAATGTATCGGACT+CGG | 0.570082 | 2.3:-42652518 | None:intergenic |
ATCAGTGACACGAAGAGATG+TGG | 0.570760 | 2.3:-42657172 | None:intergenic |
GAACTAAACTTTGAAGATGA+GGG | 0.571616 | 2.3:+42656995 | MS.gene97986:CDS |
TTATCAAGTATTGATGAGAA+TGG | 0.576198 | 2.3:+42652364 | MS.gene97986:CDS |
AGTGTGGCACAATGAGCTCC+CGG | 0.577296 | 2.3:-42654070 | None:intergenic |
TTACCAAATTGGAGTTTGAG+AGG | 0.577960 | 2.3:+42655956 | MS.gene97986:CDS |
TCAGCAAGAAAAGGAGGCAG+CGG | 0.581344 | 2.3:-42652604 | None:intergenic |
TCTGAGGTTATCAAGAGTCA+TGG | 0.581424 | 2.3:-42657140 | None:intergenic |
AGATCAGTGCCTGCGACTGA+TGG | 0.582431 | 2.3:-42656325 | None:intergenic |
TTAGCGTACTATCATGGAGT+AGG | 0.582628 | 2.3:+42653981 | MS.gene97986:CDS |
TTGAAAGCGTTGAGGAACAC+CGG | 0.583723 | 2.3:+42652475 | MS.gene97986:CDS |
AGAAGCCTTAAAGAAGCAAG+TGG | 0.583882 | 2.3:+42657072 | MS.gene97986:CDS |
TGGTAGAAGCGGGAGAACAT+TGG | 0.584904 | 2.3:+42652960 | MS.gene97986:CDS |
CAAGAGAACCAGTTCTGCAA+GGG | 0.586453 | 2.3:+42653955 | MS.gene97986:CDS |
CATATGCAAGGAAAGGAAGA+AGG | 0.587629 | 2.3:+42652396 | MS.gene97986:CDS |
CCCGTGATGATTGGTAGAAG+CGG | 0.592602 | 2.3:+42652949 | MS.gene97986:CDS |
ACTGAGGTTACTCAGCTGCT+GGG | 0.593378 | 2.3:-42656348 | None:intergenic |
TAGAAGCGGGAGAACATTGG+AGG | 0.594332 | 2.3:+42652963 | MS.gene97986:CDS |
CTTACCAACTGCCTAAGGAA+TGG | 0.597362 | 2.3:+42656524 | MS.gene97986:CDS |
GTAGGTTGTCACAAATGTGG+AGG | 0.597775 | 2.3:+42656288 | MS.gene97986:intron |
TCGCACCATCTGTGAACAGT+GGG | 0.598576 | 2.3:+42656574 | MS.gene97986:CDS |
GCAAGAGAACCAGTTCTGCA+AGG | 0.603472 | 2.3:+42653954 | MS.gene97986:CDS |
CCGCTTCTACCAATCATCAC+GGG | 0.604064 | 2.3:-42652949 | None:intergenic |
TTTGTAGGTTGTCACAAATG+TGG | 0.604629 | 2.3:+42656285 | MS.gene97986:intron |
GAACTGCCTAAGTGTGGCAC+CGG | 0.605074 | 2.3:-42652494 | None:intergenic |
AAGCTGAATCCACTTACTGA+GGG | 0.607524 | 2.3:-42656504 | None:intergenic |
CCCGCTTCTACCAATCATCA+CGG | 0.607752 | 2.3:-42652950 | None:intergenic |
AAGCTCCCACTGTTCACAGA+TGG | 0.608574 | 2.3:-42656579 | None:intergenic |
TCAGAAGCTGATGTAAGTGT+GGG | 0.608804 | 2.3:+42652826 | MS.gene97986:CDS |
TAGCTTATTTGAAAGCGTTG+AGG | 0.611440 | 2.3:+42652467 | MS.gene97986:CDS |
TTCACTAGGACTAGAAAACT+CGG | 0.624299 | 2.3:-42654038 | None:intergenic |
CTAAGGAATGGCAATGAAAG+CGG | 0.626651 | 2.3:+42656536 | MS.gene97986:CDS |
GATGTGGAAGTCTAGTTCTG+AGG | 0.627153 | 2.3:-42657156 | None:intergenic |
AAGTATTGATGAGAATGGAA+GGG | 0.627938 | 2.3:+42652369 | MS.gene97986:CDS |
CTCGGTGAACTGCCTAAGTG+TGG | 0.628590 | 2.3:-42652500 | None:intergenic |
TCTAAACAAAGTAATAGCAG+AGG | 0.632255 | 2.3:-42652899 | None:intergenic |
TGGAAGGGTTGGCATATGCA+AGG | 0.636814 | 2.3:+42652384 | MS.gene97986:CDS |
GGGTTGGCATATGCAAGGAA+AGG | 0.637575 | 2.3:+42652389 | MS.gene97986:CDS |
TGTCATATAATGTAGGAGGA+GGG | 0.638178 | 2.3:+42655931 | MS.gene97986:intron |
ATGAAGGTAATATAAGCCCC+AGG | 0.640592 | 2.3:+42657020 | MS.gene97986:CDS |
TGGAACGTATGGATAACAGA+AGG | 0.642185 | 2.3:-42656865 | None:intergenic |
TTGTATTGTGGTTATCACTG+AGG | 0.645449 | 2.3:-42656364 | None:intergenic |
GTTCTTATTGATATCAGCAG+CGG | 0.646022 | 2.3:+42653048 | MS.gene97986:CDS |
CTGATTTGATAAGTCTGCGG+CGG | 0.647923 | 2.3:+42656067 | MS.gene97986:CDS |
GGCAGAGAAGAAACTTTACA+AGG | 0.650354 | 2.3:+42654108 | MS.gene97986:CDS |
GATTTCCTTTATACACGCTG+AGG | 0.652486 | 2.3:-42653022 | None:intergenic |
TAAGCTGAATCCACTTACTG+AGG | 0.654495 | 2.3:-42656505 | None:intergenic |
TATGAAATAGCGGATGCCTG+GGG | 0.656539 | 2.3:-42657036 | None:intergenic |
GCAGTTAATGCAACCAACTG+GGG | 0.660306 | 2.3:-42656144 | None:intergenic |
AACTTGAAAGAAAGTTGCGG+AGG | 0.663528 | 2.3:+42656936 | MS.gene97986:CDS |
AGGTAGCAAATCAGGCGGTG+GGG | 0.663914 | 2.3:-42652578 | None:intergenic |
AGAAGCGGGAGAACATTGGA+GGG | 0.666824 | 2.3:+42652964 | MS.gene97986:CDS |
GGAACACCGGTGCCACACTT+AGG | 0.668962 | 2.3:+42652488 | MS.gene97986:CDS |
TTCGCACCATCTGTGAACAG+TGG | 0.670588 | 2.3:+42656573 | MS.gene97986:CDS |
CAAATGTGGAGGATAATGCA+TGG | 0.676138 | 2.3:+42656299 | MS.gene97986:CDS |
AGTCTGATTTGATAAGTCTG+CGG | 0.684088 | 2.3:+42656064 | MS.gene97986:CDS |
AGATGGTGCGAATAGAAGAG+TGG | 0.685672 | 2.3:-42656562 | None:intergenic |
GGTGGAGGTAGCAAATCAGG+CGG | 0.716370 | 2.3:-42652583 | None:intergenic |
GCAGCGGAGATACTCTTCTG+CGG | 0.753633 | 2.3:+42653064 | MS.gene97986:CDS |
AGTGTGGGAAGATCACGTAG+CGG | 0.767022 | 2.3:+42652841 | MS.gene97986:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGAAATTTCAATAATTTTAA+AGG | - | chr2.3:42653131-42653150 | None:intergenic | 10.0% |
!! | AAATTTCTTTATGATAGATT+AGG | + | chr2.3:42653143-42653162 | MS.gene97986:intron | 15.0% |
!! | ATAAGCTATAAATGTTATTA+TGG | - | chr2.3:42653327-42653346 | None:intergenic | 15.0% |
!! | ATTTAATGCAAAAGATATTT+AGG | + | chr2.3:42654302-42654321 | MS.gene97986:intron | 15.0% |
!! | GAAAACAAAAAAAATTACAA+GGG | + | chr2.3:42655484-42655503 | MS.gene97986:intron | 15.0% |
!! | TATTTAAATTCAAAAGGTTA+TGG | + | chr2.3:42655720-42655739 | MS.gene97986:intron | 15.0% |
!! | TGAAAACAAAAAAAATTACA+AGG | + | chr2.3:42655483-42655502 | MS.gene97986:intron | 15.0% |
!! | TTATTTACTTACTTTACATT+TGG | + | chr2.3:42655880-42655899 | MS.gene97986:intron | 15.0% |
!! | TTTAATGCAAAAGATATTTA+GGG | + | chr2.3:42654303-42654322 | MS.gene97986:intron | 15.0% |
!! | AAAGTCTAATTCTAATGTAT+CGG | - | chr2.3:42652527-42652546 | None:intergenic | 20.0% |
!! | ATATGTAGAATAAGTTTGAT+AGG | - | chr2.3:42653811-42653830 | None:intergenic | 20.0% |
!! | CACACTTAAAAAATTATATG+CGG | + | chr2.3:42654087-42654106 | MS.gene97986:CDS | 20.0% |
!! | TAATGAAAAACATTAGTTGT+TGG | - | chr2.3:42654457-42654476 | None:intergenic | 20.0% |
!! | TAGGCTTATTTAAATTCAAA+AGG | + | chr2.3:42655714-42655733 | MS.gene97986:intron | 20.0% |
!! | TATTTAGGGAAAAATAAATC+AGG | + | chr2.3:42654317-42654336 | MS.gene97986:intron | 20.0% |
!! | TGAAAAAAAGTTATTGAAAC+AGG | - | chr2.3:42653626-42653645 | None:intergenic | 20.0% |
!!! | CTGTTTATTGGTTTTATTAT+TGG | - | chr2.3:42654147-42654166 | None:intergenic | 20.0% |
!!! | GGAATGATAATATTTTTTTC+TGG | + | chr2.3:42656800-42656819 | MS.gene97986:intron | 20.0% |
!!! | TCATTTATTTATCTGGTTTT+TGG | + | chr2.3:42655662-42655681 | MS.gene97986:intron | 20.0% |
!!! | TGGAAAAATGTAAATTCTTT+TGG | + | chr2.3:42656668-42656687 | MS.gene97986:intron | 20.0% |
!!! | TTTGAAGTCATTTATTTATC+TGG | + | chr2.3:42655655-42655674 | MS.gene97986:intron | 20.0% |
!!! | TTTTAATACTCTTAAAACTG+AGG | + | chr2.3:42653260-42653279 | MS.gene97986:intron | 20.0% |
!!! | TTTTCAAGCAAATATTAATG+TGG | - | chr2.3:42653592-42653611 | None:intergenic | 20.0% |
! | AAAAACTTGAAAGAAAGTTG+CGG | + | chr2.3:42656933-42656952 | MS.gene97986:CDS | 25.0% |
! | AAATCAGGAACAAAATTTCA+AGG | + | chr2.3:42654332-42654351 | MS.gene97986:intron | 25.0% |
! | AATGAAATACTAGAGAATGA+TGG | + | chr2.3:42652652-42652671 | MS.gene97986:CDS | 25.0% |
! | ATAAATGACTTCAAAGACAA+AGG | - | chr2.3:42655650-42655669 | None:intergenic | 25.0% |
! | ATATTAGAAAACTGCAAACA+TGG | + | chr2.3:42654241-42654260 | MS.gene97986:intron | 25.0% |
! | CTAAGAAAGAATAAAAGCAA+AGG | - | chr2.3:42655697-42655716 | None:intergenic | 25.0% |
! | GTTCAAATGTCATATAATGT+AGG | + | chr2.3:42655924-42655943 | MS.gene97986:intron | 25.0% |
! | TTATATCTGATTCATATCCT+AGG | + | chr2.3:42656236-42656255 | MS.gene97986:intron | 25.0% |
! | TTCATCTATAAGTTCCAAAA+TGG | - | chr2.3:42656115-42656134 | None:intergenic | 25.0% |
! | TTTCGAAATGTTTGAATGTA+TGG | + | chr2.3:42653296-42653315 | MS.gene97986:intron | 25.0% |
!! | AGACAACATTCTAAAAAAGT+TGG | + | chr2.3:42656910-42656929 | MS.gene97986:CDS | 25.0% |
!! | AGATGTGTAAATTTTATGAG+CGG | + | chr2.3:42656779-42656798 | MS.gene97986:intron | 25.0% |
!! | TTGGCAAAACTTTTATGTAT+GGG | + | chr2.3:42656687-42656706 | MS.gene97986:intron | 25.0% |
!! | TTTGGCAAAACTTTTATGTA+TGG | + | chr2.3:42656686-42656705 | MS.gene97986:intron | 25.0% |
!!! | AAAACTGTTGTTTGTTTTGT+AGG | + | chr2.3:42656270-42656289 | MS.gene97986:intron | 25.0% |
!!! | AGAAACCTTTTTTATGATGT+TGG | - | chr2.3:42654893-42654912 | None:intergenic | 25.0% |
!!! | AGTTTTTTAAAGCAAAACCT+AGG | - | chr2.3:42656256-42656275 | None:intergenic | 25.0% |
!!! | CGCATATAATTTTTTAAGTG+TGG | - | chr2.3:42654089-42654108 | None:intergenic | 25.0% |
!!! | CTTTGCTTTTATTCTTTCTT+AGG | + | chr2.3:42655695-42655714 | MS.gene97986:intron | 25.0% |
!!! | GGTTATGGTCTTATATATTA+TGG | + | chr2.3:42655735-42655754 | MS.gene97986:intron | 25.0% |
!!! | TGTTTGTTTCTTTTGATCAA+AGG | + | chr2.3:42655842-42655861 | MS.gene97986:intron | 25.0% |
!!! | TTATCAAGTATTGATGAGAA+TGG | + | chr2.3:42652364-42652383 | MS.gene97986:CDS | 25.0% |
AAAGGAGAAAGATAGAACAT+AGG | - | chr2.3:42655632-42655651 | None:intergenic | 30.0% | |
AAATCTCATATTCATAGCTC+TGG | - | chr2.3:42653754-42653773 | None:intergenic | 30.0% | |
AAATGATAACCACTATCCTT+AGG | - | chr2.3:42653511-42653530 | None:intergenic | 30.0% | |
AAGTCTATCATAACGCATAT+AGG | - | chr2.3:42653840-42653859 | None:intergenic | 30.0% | |
AAGTGTGAAAGCAGATTATT+TGG | + | chr2.3:42657096-42657115 | MS.gene97986:CDS | 30.0% | |
AATCTTTAATTAGTGCCCTA+AGG | + | chr2.3:42653492-42653511 | MS.gene97986:intron | 30.0% | |
AATGATAACCACTATCCTTA+GGG | - | chr2.3:42653510-42653529 | None:intergenic | 30.0% | |
AATTTCAAGGCATATTGTTC+AGG | + | chr2.3:42654345-42654364 | MS.gene97986:intron | 30.0% | |
AGAAACCAAAACTGAATTTG+AGG | + | chr2.3:42652789-42652808 | MS.gene97986:CDS | 30.0% | |
AGAAATTCTTCACGGAATTA+TGG | + | chr2.3:42655139-42655158 | MS.gene97986:intron | 30.0% | |
AGTCTATCATAACGCATATA+GGG | - | chr2.3:42653839-42653858 | None:intergenic | 30.0% | |
CAAATAAGCTAATAAGGCAT+CGG | - | chr2.3:42652458-42652477 | None:intergenic | 30.0% | |
CAAATGTCATATAATGTAGG+AGG | + | chr2.3:42655927-42655946 | MS.gene97986:intron | 30.0% | |
CAAATTCTAGATTCTTCCAT+TGG | - | chr2.3:42654829-42654848 | None:intergenic | 30.0% | |
CAGAATTCAGAATTGTATTG+TGG | - | chr2.3:42656379-42656398 | None:intergenic | 30.0% | |
CATATTTACTGTCAATCTTG+AGG | - | chr2.3:42654501-42654520 | None:intergenic | 30.0% | |
CGCTTTCAAATAAGCTAATA+AGG | - | chr2.3:42652464-42652483 | None:intergenic | 30.0% | |
CTCAAGATTGACAGTAAATA+TGG | + | chr2.3:42654499-42654518 | MS.gene97986:intron | 30.0% | |
GACATTTGAACAATGAGAAA+AGG | - | chr2.3:42655915-42655934 | None:intergenic | 30.0% | |
TAATTCTAATGTATCGGACT+CGG | - | chr2.3:42652521-42652540 | None:intergenic | 30.0% | |
TATATTATGGCTCAATTGAC+TGG | + | chr2.3:42655748-42655767 | MS.gene97986:intron | 30.0% | |
TCGATCAAATGTTGAGAAAT+TGG | + | chr2.3:42656041-42656060 | MS.gene97986:CDS | 30.0% | |
TCTAAACAAAGTAATAGCAG+AGG | - | chr2.3:42652902-42652921 | None:intergenic | 30.0% | |
TTCTATCTATCCCTTAGTTA+GGG | + | chr2.3:42655798-42655817 | MS.gene97986:intron | 30.0% | |
! | AAACTCTTTTCAGCAAGAAA+AGG | - | chr2.3:42652616-42652635 | None:intergenic | 30.0% |
! | AAGGCTAAGATTTTTGACAT+CGG | - | chr2.3:42655084-42655103 | None:intergenic | 30.0% |
! | ACGTTCAAAGATGATTTTTC+CGG | + | chr2.3:42654763-42654782 | MS.gene97986:intron | 30.0% |
! | GAACTAAACTTTGAAGATGA+GGG | + | chr2.3:42656995-42657014 | MS.gene97986:CDS | 30.0% |
! | TCAGATTTGAAACATCGTAT+AGG | - | chr2.3:42653473-42653492 | None:intergenic | 30.0% |
! | TGAAACAACTTCATCCATTT+TGG | + | chr2.3:42656098-42656117 | MS.gene97986:CDS | 30.0% |
! | TGAACTAAACTTTGAAGATG+AGG | + | chr2.3:42656994-42657013 | MS.gene97986:CDS | 30.0% |
! | TTCATCCTCAAATTCAGTTT+TGG | - | chr2.3:42652797-42652816 | None:intergenic | 30.0% |
!! | AAGTATTGATGAGAATGGAA+GGG | + | chr2.3:42652369-42652388 | MS.gene97986:CDS | 30.0% |
!! | ACAGTTAGTTTGTAATAGAG+AGG | + | chr2.3:42652426-42652445 | MS.gene97986:CDS | 30.0% |
!! | ATAACTTGCTGAGAAAAACT+AGG | + | chr2.3:42655437-42655456 | MS.gene97986:intron | 30.0% |
!! | CGTTTATTTTCTGTGTGTAT+GGG | + | chr2.3:42653889-42653908 | MS.gene97986:intron | 30.0% |
!! | GATAGATTAGGTTTTGTCAT+TGG | + | chr2.3:42653155-42653174 | MS.gene97986:intron | 30.0% |
!! | TAACTTGCTGAGAAAAACTA+GGG | + | chr2.3:42655438-42655457 | MS.gene97986:intron | 30.0% |
!! | TCGGCTATTTTATGAAATAG+CGG | - | chr2.3:42657049-42657068 | None:intergenic | 30.0% |
!! | TCGTTTATTTTCTGTGTGTA+TGG | + | chr2.3:42653888-42653907 | MS.gene97986:intron | 30.0% |
!!! | ACATTTTTTTTCTTCTGCTC+TGG | + | chr2.3:42653917-42653936 | MS.gene97986:intron | 30.0% |
!!! | GTTGGTTGTTTTTTTAGCAA+GGG | - | chr2.3:42654439-42654458 | None:intergenic | 30.0% |
!!! | TGTTGGTTGTTTTTTTAGCA+AGG | - | chr2.3:42654440-42654459 | None:intergenic | 30.0% |
!!! | TTTTAGAATGTTGTCTTCCT+CGG | - | chr2.3:42656906-42656925 | None:intergenic | 30.0% |
AAACATCAAGCAATGGCTTA+GGG | - | chr2.3:42655277-42655296 | None:intergenic | 35.0% | |
ACAACTTCTACTTTATCCAC+AGG | - | chr2.3:42652742-42652761 | None:intergenic | 35.0% | |
ACTTTCCACTTGCTTCTTTA+AGG | - | chr2.3:42657080-42657099 | None:intergenic | 35.0% | |
AGTGGTGAAGAAATTCTTCA+CGG | + | chr2.3:42655131-42655150 | MS.gene97986:intron | 35.0% | |
ATCGTCATTGAAAAAGCAAG+AGG | + | chr2.3:42655984-42656003 | MS.gene97986:CDS | 35.0% | |
ATGCAGCCCAAAAATATTTG+GGG | - | chr2.3:42654271-42654290 | None:intergenic | 35.0% | |
ATGTCATATAATGTAGGAGG+AGG | + | chr2.3:42655930-42655949 | MS.gene97986:intron | 35.0% | |
ATTCTTCACGGAATTATGGA+TGG | + | chr2.3:42655143-42655162 | MS.gene97986:intron | 35.0% | |
CAAACGAAAGATGGTGAAAA+GGG | - | chr2.3:42655609-42655628 | None:intergenic | 35.0% | |
CAAGGCCAACATCATAAAAA+AGG | + | chr2.3:42654885-42654904 | MS.gene97986:intron | 35.0% | |
CAATATGCTGGACAGTAATT+AGG | + | chr2.3:42653714-42653733 | MS.gene97986:intron | 35.0% | |
CAGCAACATAGACTGTTTAT+TGG | - | chr2.3:42654159-42654178 | None:intergenic | 35.0% | |
CATGCAGCCCAAAAATATTT+GGG | - | chr2.3:42654272-42654291 | None:intergenic | 35.0% | |
CATTTCAGACTACAATATGC+TGG | + | chr2.3:42653702-42653721 | MS.gene97986:intron | 35.0% | |
CGAAATCTGAGAAATATACC+CGG | - | chr2.3:42656169-42656188 | None:intergenic | 35.0% | |
CTTCTATCTATCCCTTAGTT+AGG | + | chr2.3:42655797-42655816 | MS.gene97986:intron | 35.0% | |
GAAACTTTACAAGGCAGTAA+AGG | + | chr2.3:42654117-42654136 | MS.gene97986:CDS | 35.0% | |
GGAAAAATCATCTTTGAACG+TGG | - | chr2.3:42654764-42654783 | None:intergenic | 35.0% | |
GTTCTTATTGATATCAGCAG+CGG | + | chr2.3:42653048-42653067 | MS.gene97986:CDS | 35.0% | |
GTTTCCAATACAGAAAAGAC+AGG | - | chr2.3:42653201-42653220 | None:intergenic | 35.0% | |
TACAATTCAGTTTGAGAGTG+AGG | + | chr2.3:42656421-42656440 | MS.gene97986:CDS | 35.0% | |
TCATGCAGCCCAAAAATATT+TGG | - | chr2.3:42654273-42654292 | None:intergenic | 35.0% | |
TCCACTCTTAACTAACAAGT+TGG | - | chr2.3:42655328-42655347 | None:intergenic | 35.0% | |
TCCATTCGAAAAACAAAGCA+TGG | - | chr2.3:42656652-42656671 | None:intergenic | 35.0% | |
TCGTCATTGAAAAAGCAAGA+GGG | + | chr2.3:42655985-42656004 | MS.gene97986:CDS | 35.0% | |
TGTCATATAATGTAGGAGGA+GGG | + | chr2.3:42655931-42655950 | MS.gene97986:intron | 35.0% | |
TTACATCAGCTTCTGAATCT+TGG | - | chr2.3:42652822-42652841 | None:intergenic | 35.0% | |
TTACCAAATTGGAGTTTGAG+AGG | + | chr2.3:42655956-42655975 | MS.gene97986:CDS | 35.0% | |
TTCACTAGGACTAGAAAACT+CGG | - | chr2.3:42654041-42654060 | None:intergenic | 35.0% | |
TTGAGCAATTATGGAACGTA+TGG | - | chr2.3:42656879-42656898 | None:intergenic | 35.0% | |
TTGCGCTAAACACTTCTTAT+TGG | + | chr2.3:42656724-42656743 | MS.gene97986:intron | 35.0% | |
TTGTATTGTGGTTATCACTG+AGG | - | chr2.3:42656367-42656386 | None:intergenic | 35.0% | |
TTTGTAGGTTGTCACAAATG+TGG | + | chr2.3:42656285-42656304 | MS.gene97986:intron | 35.0% | |
! | AATCGCAACAAGAGTATGTA+AGG | + | chr2.3:42656480-42656499 | MS.gene97986:CDS | 35.0% |
! | AGTCTGATTTGATAAGTCTG+CGG | + | chr2.3:42656064-42656083 | MS.gene97986:CDS | 35.0% |
! | CAATCATTTTCCAGAGAGAA+CGG | + | chr2.3:42655196-42655215 | MS.gene97986:intron | 35.0% |
! | GCTCAATTGACTGGTATTTT+TGG | + | chr2.3:42655757-42655776 | MS.gene97986:intron | 35.0% |
! | TTTACCCATGGAGTATTCTT+TGG | - | chr2.3:42654860-42654879 | None:intergenic | 35.0% |
!! | CAAGTATTGATGAGAATGGA+AGG | + | chr2.3:42652368-42652387 | MS.gene97986:CDS | 35.0% |
!! | CATAGTTGGTAAAAACCAGA+CGG | + | chr2.3:42655355-42655374 | MS.gene97986:intron | 35.0% |
!! | CTTCTTTAAGGCTTCTGTTT+CGG | - | chr2.3:42657068-42657087 | None:intergenic | 35.0% |
!! | TAGCTTATTTGAAAGCGTTG+AGG | + | chr2.3:42652467-42652486 | MS.gene97986:CDS | 35.0% |
!! | TCCAACTTGTTAGTTAAGAG+TGG | + | chr2.3:42655324-42655343 | MS.gene97986:intron | 35.0% |
!!! | AAATATTTTTGGGCTGCATG+AGG | + | chr2.3:42654272-42654291 | MS.gene97986:intron | 35.0% |
!!! | AATATTTTTGGGCTGCATGA+GGG | + | chr2.3:42654273-42654292 | MS.gene97986:intron | 35.0% |
!!! | CAGAAGGTTTTTTATCGCAT+TGG | - | chr2.3:42656852-42656871 | None:intergenic | 35.0% |
!!! | GAAAAGAGTTTTGTTCACGT+TGG | + | chr2.3:42652625-42652644 | MS.gene97986:CDS | 35.0% |
!!! | GATAGGTGTTTTGATATCCA+TGG | - | chr2.3:42654616-42654635 | None:intergenic | 35.0% |
!!! | GTTGTTTTTTTAGCAAGGGT+CGG | - | chr2.3:42654435-42654454 | None:intergenic | 35.0% |
!!! | TTTTTTCTGGCACTTTGATG+TGG | + | chr2.3:42656813-42656832 | MS.gene97986:intron | 35.0% |
AAAGCTATTCCCGTGATGAT+TGG | + | chr2.3:42652940-42652959 | MS.gene97986:CDS | 40.0% | |
AACAATTGCCACCCTAACTA+AGG | - | chr2.3:42655812-42655831 | None:intergenic | 40.0% | |
AACTTGAAAGAAAGTTGCGG+AGG | + | chr2.3:42656936-42656955 | MS.gene97986:CDS | 40.0% | |
AAGCTGAATCCACTTACTGA+GGG | - | chr2.3:42656507-42656526 | None:intergenic | 40.0% | |
AATAGCCTCAATTGCTTGAG+AGG | - | chr2.3:42657215-42657234 | None:intergenic | 40.0% | |
AATCGATGTTCTTGGTGAGA+TGG | + | chr2.3:42655235-42655254 | MS.gene97986:intron | 40.0% | |
AATTAGTGCCCTAAGGATAG+TGG | + | chr2.3:42653499-42653518 | MS.gene97986:intron | 40.0% | |
ACAATTGCCACCCTAACTAA+GGG | - | chr2.3:42655811-42655830 | None:intergenic | 40.0% | |
ACGAACCAAAGAATACTCCA+TGG | + | chr2.3:42654852-42654871 | MS.gene97986:intron | 40.0% | |
ACGAGATTTACCATGCTTTC+GGG | + | chr2.3:42654675-42654694 | MS.gene97986:intron | 40.0% | |
ACGTTCCATAATTGCTCAAC+AGG | + | chr2.3:42656880-42656899 | MS.gene97986:CDS | 40.0% | |
AGAAGCCTTAAAGAAGCAAG+TGG | + | chr2.3:42657072-42657091 | MS.gene97986:CDS | 40.0% | |
AGAAGTTGTAGAGTCGTTTG+AGG | + | chr2.3:42652753-42652772 | MS.gene97986:CDS | 40.0% | |
AGAGTTGAAAGTAGGTCCAA+TGG | + | chr2.3:42654810-42654829 | MS.gene97986:intron | 40.0% | |
AGGTTTGCCAAAATCTCATG+AGG | - | chr2.3:42655041-42655060 | None:intergenic | 40.0% | |
ATCTGATTCAGCCATGAGTT+AGG | + | chr2.3:42655386-42655405 | MS.gene97986:intron | 40.0% | |
ATGAAGGTAATATAAGCCCC+AGG | + | chr2.3:42657020-42657039 | MS.gene97986:CDS | 40.0% | |
ATTGAAAAAGCAAGAGGGTG+AGG | + | chr2.3:42655990-42656009 | MS.gene97986:CDS | 40.0% | |
ATTGATGAGAATGGAAGGGT+TGG | + | chr2.3:42652373-42652392 | MS.gene97986:CDS | 40.0% | |
CAAAACACCTATCGATAGTG+TGG | + | chr2.3:42654623-42654642 | MS.gene97986:intron | 40.0% | |
CAAAATCTCATGAGGGTTGT+TGG | - | chr2.3:42655033-42655052 | None:intergenic | 40.0% | |
CAAACATCAAGCAATGGCTT+AGG | - | chr2.3:42655278-42655297 | None:intergenic | 40.0% | |
CAAATGTGGAGGATAATGCA+TGG | + | chr2.3:42656299-42656318 | MS.gene97986:CDS | 40.0% | |
CAGAAAAGACAGGAAGCAAA+AGG | - | chr2.3:42653191-42653210 | None:intergenic | 40.0% | |
CATATGCAAGGAAAGGAAGA+AGG | + | chr2.3:42652396-42652415 | MS.gene97986:CDS | 40.0% | |
CATCTGCTGCAAATTGATCA+AGG | + | chr2.3:42652691-42652710 | MS.gene97986:CDS | 40.0% | |
CCATCTACTACTACTCAGAA+TGG | - | chr2.3:42653557-42653576 | None:intergenic | 40.0% | |
CCATTCTGAGTAGTAGTAGA+TGG | + | chr2.3:42653554-42653573 | MS.gene97986:intron | 40.0% | |
CGAACCAAAGAATACTCCAT+GGG | + | chr2.3:42654853-42654872 | MS.gene97986:intron | 40.0% | |
CTAAGGAATGGCAATGAAAG+CGG | + | chr2.3:42656536-42656555 | MS.gene97986:CDS | 40.0% | |
CTACTCAGAATGGTATTCAG+TGG | - | chr2.3:42653547-42653566 | None:intergenic | 40.0% | |
CTTCCTCTCAAACTCCAATT+TGG | - | chr2.3:42655962-42655981 | None:intergenic | 40.0% | |
GAACATAGGCAAACGAAAGA+TGG | - | chr2.3:42655618-42655637 | None:intergenic | 40.0% | |
GAATTAGACTTTGCCTCTAC+TGG | + | chr2.3:42652535-42652554 | MS.gene97986:CDS | 40.0% | |
GACATTGCAGAGTTGAAAGT+AGG | + | chr2.3:42654802-42654821 | MS.gene97986:intron | 40.0% | |
GACGAGATTTACCATGCTTT+CGG | + | chr2.3:42654674-42654693 | MS.gene97986:intron | 40.0% | |
GACTGTTTGGATAAGATCCA+AGG | - | chr2.3:42654982-42655001 | None:intergenic | 40.0% | |
GATTTCCTTTATACACGCTG+AGG | - | chr2.3:42653025-42653044 | None:intergenic | 40.0% | |
GCAAACGAAAGATGGTGAAA+AGG | - | chr2.3:42655610-42655629 | None:intergenic | 40.0% | |
GGCAGAGAAGAAACTTTACA+AGG | + | chr2.3:42654108-42654127 | MS.gene97986:CDS | 40.0% | |
GGGTATTTAGCGTACTATCA+TGG | + | chr2.3:42653975-42653994 | MS.gene97986:CDS | 40.0% | |
GGTCATCAAACATCAAGCAA+TGG | - | chr2.3:42655284-42655303 | None:intergenic | 40.0% | |
GGTTTGCCAAAATCTCATGA+GGG | - | chr2.3:42655040-42655059 | None:intergenic | 40.0% | |
GTCTACTTTGTTGCGTATAC+CGG | - | chr2.3:42654785-42654804 | None:intergenic | 40.0% | |
TAAGCTGAATCCACTTACTG+AGG | - | chr2.3:42656508-42656527 | None:intergenic | 40.0% | |
TATCTATCCCTTAGTTAGGG+TGG | + | chr2.3:42655801-42655820 | MS.gene97986:intron | 40.0% | |
TCAGAAGCTGATGTAAGTGT+GGG | + | chr2.3:42652826-42652845 | MS.gene97986:CDS | 40.0% | |
TCATTCTCAGTCAAGCCAAT+AGG | + | chr2.3:42657234-42657253 | MS.gene97986:CDS | 40.0% | |
TCTGATTCAGCCATGAGTTA+GGG | + | chr2.3:42655387-42655406 | MS.gene97986:intron | 40.0% | |
TGAAATCATGCAAGAGACCT+TGG | + | chr2.3:42654962-42654981 | MS.gene97986:intron | 40.0% | |
TGATACGAGAAGGTTATACC+AGG | - | chr2.3:42655061-42655080 | None:intergenic | 40.0% | |
TGATGACCATGAGTGATAGT+TGG | + | chr2.3:42655296-42655315 | MS.gene97986:intron | 40.0% | |
TGGAACGTATGGATAACAGA+AGG | - | chr2.3:42656868-42656887 | None:intergenic | 40.0% | |
TTAGCGTACTATCATGGAGT+AGG | + | chr2.3:42653981-42654000 | MS.gene97986:CDS | 40.0% | |
TTAGGGAAGAGAGAAATGTC+TGG | + | chr2.3:42655404-42655423 | MS.gene97986:intron | 40.0% | |
TTCAGAAGCTGATGTAAGTG+TGG | + | chr2.3:42652825-42652844 | MS.gene97986:CDS | 40.0% | |
TTCTCGCTGTTCATATTCCT+TGG | + | chr2.3:42654909-42654928 | MS.gene97986:intron | 40.0% | |
TTGAGAGTGAGGCTTCTTAT+TGG | + | chr2.3:42656432-42656451 | MS.gene97986:CDS | 40.0% | |
TTGGCATAACAGTAAGAGCA+AGG | + | chr2.3:42653361-42653380 | MS.gene97986:intron | 40.0% | |
TTGTGAGACTGTTTGGAAGA+AGG | - | chr2.3:42655103-42655122 | None:intergenic | 40.0% | |
TTTCTCTCTTCCCTAACTCA+TGG | - | chr2.3:42655400-42655419 | None:intergenic | 40.0% | |
TTTGAAGATGAGGGTGATGA+AGG | + | chr2.3:42657004-42657023 | MS.gene97986:CDS | 40.0% | |
! | CAACAACCCTCATGAGATTT+TGG | + | chr2.3:42655031-42655050 | MS.gene97986:intron | 40.0% |
! | CGTTCTCTCTGGAAAATGAT+TGG | - | chr2.3:42655198-42655217 | None:intergenic | 40.0% |
! | CTCTTTTCAGCAAGAAAAGG+AGG | - | chr2.3:42652613-42652632 | None:intergenic | 40.0% |
! | GCTTCCTGTCTTTTCTGTAT+TGG | + | chr2.3:42653194-42653213 | MS.gene97986:intron | 40.0% |
! | GCTTTTCGAAGTGGTGAATA+TGG | - | chr2.3:42654706-42654725 | None:intergenic | 40.0% |
! | GGTGTGCCCCAAATATTTTT+GGG | + | chr2.3:42654262-42654281 | MS.gene97986:intron | 40.0% |
! | TCATCAACTGGTTCTTTGAC+CGG | - | chr2.3:42652874-42652893 | None:intergenic | 40.0% |
! | TCTGAGGTTATCAAGAGTCA+TGG | - | chr2.3:42657143-42657162 | None:intergenic | 40.0% |
! | TGGTGTGCCCCAAATATTTT+TGG | + | chr2.3:42654261-42654280 | MS.gene97986:intron | 40.0% |
! | TTGTCACTTGTGAGACTGTT+TGG | - | chr2.3:42655110-42655129 | None:intergenic | 40.0% |
!! | AGGGTAAGAAGTACCTTATC+TGG | - | chr2.3:42656620-42656639 | None:intergenic | 40.0% |
!! | ATCGTTGCTATTTCAACCTG+TGG | + | chr2.3:42652723-42652742 | MS.gene97986:CDS | 40.0% |
!! | TCATGAGATTTTGGCAAACC+TGG | + | chr2.3:42655040-42655059 | MS.gene97986:intron | 40.0% |
!! | TTATGAAATAGCGGATGCCT+GGG | - | chr2.3:42657040-42657059 | None:intergenic | 40.0% |
!! | TTTATGAAATAGCGGATGCC+TGG | - | chr2.3:42657041-42657060 | None:intergenic | 40.0% |
!!! | GCCATGCTTTGTTTTTCGAA+TGG | + | chr2.3:42656648-42656667 | MS.gene97986:intron | 40.0% |
AAGCCACCAACTATCACTCA+TGG | - | chr2.3:42655305-42655324 | None:intergenic | 45.0% | |
AATGAAATCATGCCTCCTGC+TGG | - | chr2.3:42654943-42654962 | None:intergenic | 45.0% | |
ACACGACACGAAGTCTTACT+TGG | - | chr2.3:42653108-42653127 | None:intergenic | 45.0% | |
AGAAAACTCGGCGTCATCTT+TGG | - | chr2.3:42654029-42654048 | None:intergenic | 45.0% | |
AGACAGGAAGCAAAAGGTCA+TGG | - | chr2.3:42653185-42653204 | None:intergenic | 45.0% | |
AGATGGTGCGAATAGAAGAG+TGG | - | chr2.3:42656565-42656584 | None:intergenic | 45.0% | |
AGTCGTTTGAGGAGGAGAAT+TGG | + | chr2.3:42652764-42652783 | MS.gene97986:CDS | 45.0% | |
AGTCTCACAAGTGACAAGAG+TGG | + | chr2.3:42655113-42655132 | MS.gene97986:intron | 45.0% | |
AGTTGGTTGCATTAACTGCC+GGG | + | chr2.3:42656148-42656167 | MS.gene97986:CDS | 45.0% | |
AGTTGTAGAGTCGTTTGAGG+AGG | + | chr2.3:42652756-42652775 | MS.gene97986:CDS | 45.0% | |
ATCAGTGACACGAAGAGATG+TGG | - | chr2.3:42657175-42657194 | None:intergenic | 45.0% | |
ATGGAACCATCAAGTCGTCT+AGG | + | chr2.3:42655006-42655025 | MS.gene97986:intron | 45.0% | |
ATGTAAGGACCCTCAGTAAG+TGG | + | chr2.3:42656495-42656514 | MS.gene97986:CDS | 45.0% | |
ATGTGGCAATGGTCACACTT+AGG | + | chr2.3:42654652-42654671 | MS.gene97986:intron | 45.0% | |
ATTGCCATTCCTTAGGCAGT+TGG | - | chr2.3:42656531-42656550 | None:intergenic | 45.0% | |
CAAGAGAACCAGTTCTGCAA+GGG | + | chr2.3:42653955-42653974 | MS.gene97986:CDS | 45.0% | |
CAATGTAACACAGACTGCAC+AGG | - | chr2.3:42654575-42654594 | None:intergenic | 45.0% | |
CACGACACGAAGTCTTACTT+GGG | - | chr2.3:42653107-42653126 | None:intergenic | 45.0% | |
CACTTTGATGTGGTTACAGG+AGG | + | chr2.3:42656823-42656842 | MS.gene97986:intron | 45.0% | |
CAGTTGGTTGCATTAACTGC+CGG | + | chr2.3:42656147-42656166 | MS.gene97986:CDS | 45.0% | |
CGCTGTTCATATTCCTTGGT+AGG | + | chr2.3:42654913-42654932 | MS.gene97986:intron | 45.0% | |
CGCTTTCATTGCCATTCCTT+AGG | - | chr2.3:42656538-42656557 | None:intergenic | 45.0% | |
CTCCATGGGTAAAGCATACA+AGG | + | chr2.3:42654867-42654886 | MS.gene97986:intron | 45.0% | |
CTGTGCAGTCTGTGTTACAT+TGG | + | chr2.3:42654573-42654592 | MS.gene97986:intron | 45.0% | |
CTTACCAACTGCCTAAGGAA+TGG | + | chr2.3:42656524-42656543 | MS.gene97986:CDS | 45.0% | |
CTTATCCAAACAGTCAGCCA+TGG | + | chr2.3:42654987-42655006 | MS.gene97986:intron | 45.0% | |
GAAAGCCTCAGCGTGTATAA+AGG | + | chr2.3:42653017-42653036 | MS.gene97986:CDS | 45.0% | |
GCAGAGGAACTATCATCAAC+TGG | - | chr2.3:42652886-42652905 | None:intergenic | 45.0% | |
GCAGTTAATGCAACCAACTG+GGG | - | chr2.3:42656147-42656166 | None:intergenic | 45.0% | |
GCTAAATACCCTTGCAGAAC+TGG | - | chr2.3:42653966-42653985 | None:intergenic | 45.0% | |
GGAGGAGGGAATTACCAAAT+TGG | + | chr2.3:42655945-42655964 | MS.gene97986:intron | 45.0% | |
GGCAGTTAATGCAACCAACT+GGG | - | chr2.3:42656148-42656167 | None:intergenic | 45.0% | |
GGTCACAGAATCGATGTTCT+TGG | + | chr2.3:42655227-42655246 | MS.gene97986:intron | 45.0% | |
GTAGGTTGTCACAAATGTGG+AGG | + | chr2.3:42656288-42656307 | MS.gene97986:intron | 45.0% | |
GTCGTTTGAGGAGGAGAATT+GGG | + | chr2.3:42652765-42652784 | MS.gene97986:CDS | 45.0% | |
TGACCATGAGTGATAGTTGG+TGG | + | chr2.3:42655299-42655318 | MS.gene97986:intron | 45.0% | |
TGCTCTGGCATGTTCTTTGT+AGG | + | chr2.3:42653932-42653951 | MS.gene97986:intron | 45.0% | |
TGCTTCCTCTCAAGCAATTG+AGG | + | chr2.3:42657207-42657226 | MS.gene97986:CDS | 45.0% | |
TGGAACCATCAAGTCGTCTA+GGG | + | chr2.3:42655007-42655026 | MS.gene97986:intron | 45.0% | |
TGGCACTTTGATGTGGTTAC+AGG | + | chr2.3:42656820-42656839 | MS.gene97986:intron | 45.0% | |
TGTGACCATTGCCACATGAT+CGG | - | chr2.3:42654649-42654668 | None:intergenic | 45.0% | |
TTATACACGCTGAGGCTTTC+AGG | - | chr2.3:42653017-42653036 | None:intergenic | 45.0% | |
TTCAGCTTACCAACTGCCTA+AGG | + | chr2.3:42656519-42656538 | MS.gene97986:CDS | 45.0% | |
TTGACATCGGTGATACGAGA+AGG | - | chr2.3:42655071-42655090 | None:intergenic | 45.0% | |
TTGGTAAAAACCAGACGGTG+TGG | + | chr2.3:42655360-42655379 | MS.gene97986:intron | 45.0% | |
TTTGATGTGGTTACAGGAGG+TGG | + | chr2.3:42656826-42656845 | MS.gene97986:intron | 45.0% | |
! | ACATCTCTTCGTGTCACTGA+TGG | + | chr2.3:42657174-42657193 | MS.gene97986:CDS | 45.0% |
! | AGAGGGTGAGGACATTGATT+TGG | + | chr2.3:42656002-42656021 | MS.gene97986:CDS | 45.0% |
! | CTGATTTGATAAGTCTGCGG+CGG | + | chr2.3:42656067-42656086 | MS.gene97986:CDS | 45.0% |
! | TAGACGACTTGATGGTTCCA+TGG | - | chr2.3:42655007-42655026 | None:intergenic | 45.0% |
! | TGAAGAGCTTTTACCCCAGT+TGG | + | chr2.3:42656131-42656150 | MS.gene97986:CDS | 45.0% |
! | TGTGTTACATTGGTTGTCCG+AGG | + | chr2.3:42654583-42654602 | MS.gene97986:intron | 45.0% |
! | TTACATTGGTTGTCCGAGGA+GGG | + | chr2.3:42654587-42654606 | MS.gene97986:intron | 45.0% |
! | TTTTCTCTGCATCTCGTCCA+GGG | - | chr2.3:42656972-42656991 | None:intergenic | 45.0% |
! | TTTTTCTCTGCATCTCGTCC+AGG | - | chr2.3:42656973-42656992 | None:intergenic | 45.0% |
!! | GATGTGGAAGTCTAGTTCTG+AGG | - | chr2.3:42657159-42657178 | None:intergenic | 45.0% |
!! | GCTTGATGGGTTACCAGATA+AGG | + | chr2.3:42656604-42656623 | MS.gene97986:CDS | 45.0% |
!! | TATGAAATAGCGGATGCCTG+GGG | - | chr2.3:42657039-42657058 | None:intergenic | 45.0% |
!! | TTGAAAGCGTTGAGGAACAC+CGG | + | chr2.3:42652475-42652494 | MS.gene97986:CDS | 45.0% |
!! | TACATTAAAAAAAAAAAAAA+AGG | - | chr2.3:42655520-42655539 | None:intergenic | 5.0% |
!!! | AAAAATATTTTAATTAATCT+TGG | + | chr2.3:42655570-42655589 | MS.gene97986:intron | 5.0% |
!!! | AAGATTAATTAAAATATTTT+TGG | - | chr2.3:42655571-42655590 | None:intergenic | 5.0% |
AAGCTCCCACTGTTCACAGA+TGG | - | chr2.3:42656582-42656601 | None:intergenic | 50.0% | |
ACTCTTCTGCGGCAGAATTC+TGG | + | chr2.3:42653075-42653094 | MS.gene97986:CDS | 50.0% | |
AGAAGCGGGAGAACATTGGA+GGG | + | chr2.3:42652964-42652983 | MS.gene97986:CDS | 50.0% | |
AGGTAGTTTCCTCTCAGACG+CGG | - | chr2.3:42654555-42654574 | None:intergenic | 50.0% | |
AGTGTGGGAAGATCACGTAG+CGG | + | chr2.3:42652841-42652860 | MS.gene97986:CDS | 50.0% | |
ATATCCATGGTCACCCTCCT+CGG | - | chr2.3:42654603-42654622 | None:intergenic | 50.0% | |
ATCTGTGAACAGTGGGAGCT+TGG | + | chr2.3:42656581-42656600 | MS.gene97986:CDS | 50.0% | |
CATAATTGCTCAACAGGCCG+AGG | + | chr2.3:42656886-42656905 | MS.gene97986:CDS | 50.0% | |
CCAGAGAGAACGGTCTGATT+CGG | + | chr2.3:42655206-42655225 | MS.gene97986:intron | 50.0% | |
CCCGCTTCTACCAATCATCA+CGG | - | chr2.3:42652953-42652972 | None:intergenic | 50.0% | |
CCCGTGATGATTGGTAGAAG+CGG | + | chr2.3:42652949-42652968 | MS.gene97986:CDS | 50.0% | |
CCGCTTCTACCAATCATCAC+GGG | - | chr2.3:42652952-42652971 | None:intergenic | 50.0% | |
CCGTGATGATTGGTAGAAGC+GGG | + | chr2.3:42652950-42652969 | MS.gene97986:CDS | 50.0% | |
CGGCAGTTAATGCAACCAAC+TGG | - | chr2.3:42656149-42656168 | None:intergenic | 50.0% | |
CTAGTCCTAGTGAACCATGC+AGG | + | chr2.3:42654047-42654066 | MS.gene97986:CDS | 50.0% | |
CTCGGCCTGTTGAGCAATTA+TGG | - | chr2.3:42656888-42656907 | None:intergenic | 50.0% | |
CTTATGCTGCGAGTGAGCTT+TGG | + | chr2.3:42653342-42653361 | MS.gene97986:intron | 50.0% | |
GAGTGGAGCAGTGACATAGT+TGG | + | chr2.3:42655341-42655360 | MS.gene97986:intron | 50.0% | |
GCAAGAGAACCAGTTCTGCA+AGG | + | chr2.3:42653954-42653973 | MS.gene97986:CDS | 50.0% | |
GTAAAAACCAGACGGTGTGG+AGG | + | chr2.3:42655363-42655382 | MS.gene97986:intron | 50.0% | |
TAGAAGCGGGAGAACATTGG+AGG | + | chr2.3:42652963-42652982 | MS.gene97986:CDS | 50.0% | |
TATGGTCGATCCCGAAAGCA+TGG | - | chr2.3:42654688-42654707 | None:intergenic | 50.0% | |
TCAGCAAGAAAAGGAGGCAG+CGG | - | chr2.3:42652607-42652626 | None:intergenic | 50.0% | |
TCGCACCATCTGTGAACAGT+GGG | + | chr2.3:42656574-42656593 | MS.gene97986:CDS | 50.0% | |
TCTGTGAACAGTGGGAGCTT+GGG | + | chr2.3:42656582-42656601 | MS.gene97986:CDS | 50.0% | |
TGATCGGCCACACTATCGAT+AGG | - | chr2.3:42654633-42654652 | None:intergenic | 50.0% | |
TGGTAGAAGCGGGAGAACAT+TGG | + | chr2.3:42652960-42652979 | MS.gene97986:CDS | 50.0% | |
TGGTTCCATGGCTGACTGTT+TGG | - | chr2.3:42654995-42655014 | None:intergenic | 50.0% | |
TTCACCACTTCGAAAAGCCG+AGG | + | chr2.3:42654708-42654727 | MS.gene97986:intron | 50.0% | |
TTCGCACCATCTGTGAACAG+TGG | + | chr2.3:42656573-42656592 | MS.gene97986:CDS | 50.0% | |
! | CACTGATTAGCAAGACCCTG+GGG | - | chr2.3:42653404-42653423 | None:intergenic | 50.0% |
! | GGCCTTGTATGCTTTACCCA+TGG | - | chr2.3:42654872-42654891 | None:intergenic | 50.0% |
! | GGGTTGGCATATGCAAGGAA+AGG | + | chr2.3:42652389-42652408 | MS.gene97986:CDS | 50.0% |
! | GTTACATTGGTTGTCCGAGG+AGG | + | chr2.3:42654586-42654605 | MS.gene97986:intron | 50.0% |
! | TGGAAGGGTTGGCATATGCA+AGG | + | chr2.3:42652384-42652403 | MS.gene97986:CDS | 50.0% |
!! | AAGTGCCGAAAGTGTGATGG+TGG | + | chr2.3:42654526-42654545 | MS.gene97986:intron | 50.0% |
!! | CAGAAGTGCCGAAAGTGTGA+TGG | + | chr2.3:42654523-42654542 | MS.gene97986:intron | 50.0% |
!! | GCACTGATTAGCAAGACCCT+GGG | - | chr2.3:42653405-42653424 | None:intergenic | 50.0% |
!! | TGCACTGATTAGCAAGACCC+TGG | - | chr2.3:42653406-42653425 | None:intergenic | 50.0% |
ACAAAGCATGGCGCGTTGTG+AGG | - | chr2.3:42656640-42656659 | None:intergenic | 55.0% | |
ACATATACTCCCCCTCCCCA+GGG | + | chr2.3:42653386-42653405 | MS.gene97986:intron | 55.0% | |
ACTTCGAAAAGCCGAGGCAG+AGG | + | chr2.3:42654714-42654733 | MS.gene97986:intron | 55.0% | |
AGATCAGTGCCTGCGACTGA+TGG | - | chr2.3:42656328-42656347 | None:intergenic | 55.0% | |
AGCGGTGGAGGTAGCAAATC+AGG | - | chr2.3:42652589-42652608 | None:intergenic | 55.0% | |
AGGTAGCAAATCAGGCGGTG+GGG | - | chr2.3:42652581-42652600 | None:intergenic | 55.0% | |
AGTGGGAGCTTGGGCTTGAT+GGG | + | chr2.3:42656591-42656610 | MS.gene97986:CDS | 55.0% | |
AGTGTGGCACAATGAGCTCC+CGG | - | chr2.3:42654073-42654092 | None:intergenic | 55.0% | |
ATCAGATCCTCCACACCGTC+TGG | - | chr2.3:42655373-42655392 | None:intergenic | 55.0% | |
ATTAGCAAGACCCTGGGGAG+GGG | - | chr2.3:42653399-42653418 | None:intergenic | 55.0% | |
CAAAGCATGGCGCGTTGTGA+GGG | - | chr2.3:42656639-42656658 | None:intergenic | 55.0% | |
CCGAATCAGACCGTTCTCTC+TGG | - | chr2.3:42655209-42655228 | None:intergenic | 55.0% | |
CGATAGTGTGGCCGATCATG+TGG | + | chr2.3:42654635-42654654 | MS.gene97986:intron | 55.0% | |
CTCGGTGAACTGCCTAAGTG+TGG | - | chr2.3:42652503-42652522 | None:intergenic | 55.0% | |
GAACTGCCTAAGTGTGGCAC+CGG | - | chr2.3:42652497-42652516 | None:intergenic | 55.0% | |
GAGGTAGCAAATCAGGCGGT+GGG | - | chr2.3:42652582-42652601 | None:intergenic | 55.0% | |
GATTAGCAAGACCCTGGGGA+GGG | - | chr2.3:42653400-42653419 | None:intergenic | 55.0% | |
GCAGCGGAGATACTCTTCTG+CGG | + | chr2.3:42653064-42653083 | MS.gene97986:CDS | 55.0% | |
GGCGTCATCTTTGGTGAACG+TGG | - | chr2.3:42654020-42654039 | None:intergenic | 55.0% | |
GGCTGCCACCATCACACTTT+CGG | - | chr2.3:42654534-42654553 | None:intergenic | 55.0% | |
GGTGGAGGTAGCAAATCAGG+CGG | - | chr2.3:42652586-42652605 | None:intergenic | 55.0% | |
GTGTGGGAAGATCACGTAGC+GGG | + | chr2.3:42652842-42652861 | MS.gene97986:CDS | 55.0% | |
GTTGGCCCTAGACGACTTGA+TGG | - | chr2.3:42655015-42655034 | None:intergenic | 55.0% | |
TCCTAGTGAACCATGCAGGC+CGG | + | chr2.3:42654051-42654070 | MS.gene97986:CDS | 55.0% | |
TGATTAGCAAGACCCTGGGG+AGG | - | chr2.3:42653401-42653420 | None:intergenic | 55.0% | |
TGTGGCCGATCATGTGGCAA+TGG | + | chr2.3:42654641-42654660 | MS.gene97986:intron | 55.0% | |
! | ATCACGTAGCGGGAAGCAAC+CGG | + | chr2.3:42652852-42652871 | MS.gene97986:CDS | 55.0% |
! | TCTGCCTCGGCTTTTCGAAG+TGG | - | chr2.3:42654715-42654734 | None:intergenic | 55.0% |
!! | ACCTGTTGACTCCTCTGCCT+CGG | - | chr2.3:42654728-42654747 | None:intergenic | 55.0% |
AAATCAGGCGGTGGGGAAGG+CGG | - | chr2.3:42652574-42652593 | None:intergenic | 60.0% | |
AGAAAAGGAGGCAGCGGTGG+AGG | - | chr2.3:42652601-42652620 | None:intergenic | 60.0% | |
AGCAAATCAGGCGGTGGGGA+AGG | - | chr2.3:42652577-42652596 | None:intergenic | 60.0% | |
CACATATACTCCCCCTCCCC+AGG | + | chr2.3:42653385-42653404 | MS.gene97986:intron | 60.0% | |
CAGTGGGAGCTTGGGCTTGA+TGG | + | chr2.3:42656590-42656609 | MS.gene97986:CDS | 60.0% | |
CCTAGTGAACCATGCAGGCC+GGG | + | chr2.3:42654052-42654071 | MS.gene97986:CDS | 60.0% | |
GCAAGAAAAGGAGGCAGCGG+TGG | - | chr2.3:42652604-42652623 | None:intergenic | 60.0% | |
GCATGGATGCCATCAGTCGC+AGG | + | chr2.3:42656316-42656335 | MS.gene97986:CDS | 60.0% | |
GGAGGTAGCAAATCAGGCGG+TGG | - | chr2.3:42652583-42652602 | None:intergenic | 60.0% | |
TTAGCAAGACCCTGGGGAGG+GGG | - | chr2.3:42653398-42653417 | None:intergenic | 60.0% | |
TTGTCCGAGGAGGGTGACCA+TGG | + | chr2.3:42654596-42654615 | MS.gene97986:intron | 60.0% | |
! | CTGGGGAGGGGGAGTATATG+TGG | - | chr2.3:42653387-42653406 | None:intergenic | 60.0% |
!! | GGAACACCGGTGCCACACTT+AGG | + | chr2.3:42652488-42652507 | MS.gene97986:CDS | 60.0% |
AATCAGGCGGTGGGGAAGGC+GGG | - | chr2.3:42652573-42652592 | None:intergenic | 65.0% | |
CAATGAGCTCCCGGCCTGCA+TGG | - | chr2.3:42654064-42654083 | None:intergenic | 65.0% | |
CCCGGCCTGCATGGTTCACT+AGG | - | chr2.3:42654055-42654074 | None:intergenic | 65.0% | |
GCCGAGGCAGAGGAGTCAAC+AGG | + | chr2.3:42654724-42654743 | MS.gene97986:intron | 65.0% | |
GGCTTCAGGCAGGCCAGTAG+AGG | - | chr2.3:42652551-42652570 | None:intergenic | 65.0% | |
TCCTTGGTAGGCGCTCCAGC+AGG | + | chr2.3:42654925-42654944 | MS.gene97986:intron | 65.0% | |
TTGGTAGGCGCTCCAGCAGG+AGG | + | chr2.3:42654928-42654947 | MS.gene97986:intron | 65.0% | |
! | TCCTGCTGGAGCGCCTACCA+AGG | - | chr2.3:42654929-42654948 | None:intergenic | 65.0% |
ATCAGGCGGTGGGGAAGGCG+GGG | - | chr2.3:42652572-42652591 | None:intergenic | 70.0% | |
TGGTGGCAGCCGCGTCTGAG+AGG | + | chr2.3:42654543-42654562 | MS.gene97986:intron | 70.0% | |
!! | GCGGAGGTGCTCGAAGTCCC+TGG | + | chr2.3:42656952-42656971 | MS.gene97986:CDS | 70.0% |
GGGAAGGCGGGGCTTCAGGC+AGG | - | chr2.3:42652561-42652580 | None:intergenic | 75.0% | |
GGTGGGGAAGGCGGGGCTTC+AGG | - | chr2.3:42652565-42652584 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 42652352 | 42657255 | 42652352 | ID=MS.gene97986 |
chr2.3 | mRNA | 42652352 | 42657255 | 42652352 | ID=MS.gene97986.t1;Parent=MS.gene97986 |
chr2.3 | exon | 42652352 | 42653108 | 42652352 | ID=MS.gene97986.t1.exon1;Parent=MS.gene97986.t1 |
chr2.3 | CDS | 42652352 | 42653108 | 42652352 | ID=cds.MS.gene97986.t1;Parent=MS.gene97986.t1 |
chr2.3 | exon | 42653954 | 42654138 | 42653954 | ID=MS.gene97986.t1.exon2;Parent=MS.gene97986.t1 |
chr2.3 | CDS | 42653954 | 42654138 | 42653954 | ID=cds.MS.gene97986.t1;Parent=MS.gene97986.t1 |
chr2.3 | exon | 42655946 | 42656169 | 42655946 | ID=MS.gene97986.t1.exon3;Parent=MS.gene97986.t1 |
chr2.3 | CDS | 42655946 | 42656169 | 42655946 | ID=cds.MS.gene97986.t1;Parent=MS.gene97986.t1 |
chr2.3 | exon | 42656292 | 42656625 | 42656292 | ID=MS.gene97986.t1.exon4;Parent=MS.gene97986.t1 |
chr2.3 | CDS | 42656292 | 42656625 | 42656292 | ID=cds.MS.gene97986.t1;Parent=MS.gene97986.t1 |
chr2.3 | exon | 42656842 | 42657255 | 42656842 | ID=MS.gene97986.t1.exon5;Parent=MS.gene97986.t1 |
chr2.3 | CDS | 42656842 | 42657255 | 42656842 | ID=cds.MS.gene97986.t1;Parent=MS.gene97986.t1 |
Gene Sequence |
Protein sequence |