Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98219.t1 | XP_013448269.1 | 99.3 | 433 | 3 | 0 | 4 | 436 | 11 | 443 | 3.50E-248 | 867.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98219.t1 | Q9FKS8 | 83.8 | 437 | 69 | 1 | 2 | 436 | 10 | 446 | 1.7e-214 | 746.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98219.t1 | A0A072TYP2 | 99.3 | 433 | 3 | 0 | 4 | 436 | 11 | 443 | 2.5e-248 | 867.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04986 | MS.gene98219 | 0.815677 | 8.18E-52 | -1.69E-46 |
| MS.gene050173 | MS.gene98219 | 0.802339 | 5.88E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene98219 | 0.825628 | 4.23E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98219.t1 | MTR_7g038910 | 99.307 | 433 | 3 | 0 | 4 | 436 | 11 | 443 | 0.0 | 886 |
| MS.gene98219.t1 | MTR_7g038910 | 99.208 | 379 | 3 | 0 | 4 | 382 | 11 | 389 | 0.0 | 773 |
| MS.gene98219.t1 | MTR_6g022790 | 84.296 | 433 | 68 | 0 | 4 | 436 | 23 | 455 | 0.0 | 771 |
| MS.gene98219.t1 | MTR_2g101920 | 83.641 | 434 | 70 | 1 | 4 | 436 | 28 | 461 | 0.0 | 735 |
| MS.gene98219.t1 | MTR_7g038910 | 99.425 | 348 | 2 | 0 | 4 | 351 | 11 | 358 | 0.0 | 711 |
| MS.gene98219.t1 | MTR_6g023065 | 80.841 | 428 | 82 | 0 | 9 | 436 | 36 | 463 | 0.0 | 693 |
| MS.gene98219.t1 | MTR_6g022780 | 79.767 | 430 | 84 | 2 | 8 | 436 | 1 | 428 | 0.0 | 673 |
| MS.gene98219.t1 | MTR_6g023075 | 77.674 | 430 | 93 | 2 | 8 | 436 | 1 | 428 | 0.0 | 659 |
| MS.gene98219.t1 | MTR_8g080120 | 67.593 | 432 | 140 | 0 | 5 | 436 | 5 | 436 | 0.0 | 639 |
| MS.gene98219.t1 | MTR_2g096830 | 76.815 | 427 | 98 | 1 | 11 | 436 | 2 | 428 | 0.0 | 628 |
| MS.gene98219.t1 | MTR_4g103890 | 68.765 | 413 | 129 | 0 | 22 | 434 | 9 | 421 | 0.0 | 618 |
| MS.gene98219.t1 | MTR_3g085820 | 74.859 | 354 | 89 | 0 | 5 | 358 | 15 | 368 | 0.0 | 560 |
| MS.gene98219.t1 | MTR_5g054730 | 62.963 | 432 | 156 | 1 | 5 | 436 | 12 | 439 | 0.0 | 555 |
| MS.gene98219.t1 | MTR_1g093020 | 61.574 | 432 | 162 | 1 | 5 | 436 | 10 | 437 | 0.0 | 544 |
| MS.gene98219.t1 | MTR_1g093030 | 61.737 | 426 | 159 | 1 | 11 | 436 | 16 | 437 | 0.0 | 539 |
| MS.gene98219.t1 | MTR_0531s0020 | 80.312 | 320 | 63 | 0 | 7 | 326 | 33 | 352 | 0.0 | 528 |
| MS.gene98219.t1 | MTR_2g096830 | 75.731 | 342 | 82 | 1 | 11 | 351 | 2 | 343 | 0.0 | 524 |
| MS.gene98219.t1 | MTR_1g093020 | 62.843 | 401 | 145 | 1 | 5 | 405 | 10 | 406 | 0.0 | 514 |
| MS.gene98219.t1 | MTR_3g005740 | 54.060 | 431 | 194 | 2 | 10 | 436 | 39 | 469 | 9.06e-167 | 477 |
| MS.gene98219.t1 | MTR_3g115090 | 37.471 | 435 | 258 | 5 | 15 | 436 | 76 | 509 | 1.05e-94 | 294 |
| MS.gene98219.t1 | MTR_2g012470 | 37.358 | 439 | 263 | 5 | 8 | 435 | 80 | 517 | 1.36e-93 | 291 |
| MS.gene98219.t1 | MTR_5g023240 | 36.758 | 438 | 255 | 6 | 7 | 432 | 70 | 497 | 1.58e-92 | 289 |
| MS.gene98219.t1 | MTR_4g075750 | 34.459 | 444 | 274 | 4 | 9 | 435 | 56 | 499 | 1.53e-88 | 278 |
| MS.gene98219.t1 | MTR_5g023260 | 35.666 | 443 | 271 | 6 | 7 | 436 | 91 | 532 | 3.94e-88 | 278 |
| MS.gene98219.t1 | MTR_3g110660 | 31.209 | 455 | 260 | 11 | 22 | 433 | 32 | 476 | 1.85e-59 | 202 |
| MS.gene98219.t1 | MTR_1g105980 | 31.579 | 456 | 253 | 12 | 24 | 433 | 23 | 465 | 1.72e-58 | 199 |
| MS.gene98219.t1 | MTR_4g055610 | 30.735 | 449 | 283 | 11 | 4 | 436 | 24 | 460 | 2.46e-58 | 198 |
| MS.gene98219.t1 | MTR_8g099320 | 29.138 | 429 | 282 | 9 | 23 | 436 | 27 | 448 | 2.95e-58 | 197 |
| MS.gene98219.t1 | MTR_1g007380 | 31.317 | 463 | 271 | 13 | 10 | 433 | 12 | 466 | 2.31e-55 | 191 |
| MS.gene98219.t1 | MTR_1g105995 | 30.000 | 470 | 271 | 13 | 7 | 432 | 8 | 463 | 1.11e-54 | 189 |
| MS.gene98219.t1 | MTR_1g492640 | 30.516 | 426 | 275 | 9 | 25 | 436 | 61 | 479 | 6.72e-54 | 187 |
| MS.gene98219.t1 | MTR_1g105990 | 31.729 | 457 | 250 | 14 | 24 | 431 | 22 | 465 | 8.20e-54 | 186 |
| MS.gene98219.t1 | MTR_3g088475 | 28.913 | 460 | 288 | 10 | 4 | 430 | 18 | 471 | 2.90e-52 | 182 |
| MS.gene98219.t1 | MTR_3g088455 | 28.696 | 460 | 288 | 11 | 4 | 430 | 18 | 470 | 8.27e-51 | 179 |
| MS.gene98219.t1 | MTR_1g106000 | 28.850 | 461 | 268 | 11 | 24 | 433 | 16 | 467 | 1.22e-50 | 178 |
| MS.gene98219.t1 | MTR_3g096800 | 29.792 | 480 | 275 | 13 | 2 | 436 | 12 | 474 | 9.24e-50 | 176 |
| MS.gene98219.t1 | MTR_3g461480 | 28.929 | 439 | 270 | 9 | 24 | 426 | 28 | 460 | 5.98e-48 | 171 |
| MS.gene98219.t1 | MTR_1g070470 | 29.680 | 438 | 261 | 13 | 23 | 435 | 22 | 437 | 6.63e-48 | 170 |
| MS.gene98219.t1 | MTR_4g073520 | 28.850 | 461 | 263 | 13 | 24 | 433 | 60 | 506 | 8.59e-48 | 171 |
| MS.gene98219.t1 | MTR_4g073520 | 28.788 | 462 | 264 | 13 | 23 | 433 | 59 | 506 | 1.22e-47 | 171 |
| MS.gene98219.t1 | MTR_3g096830 | 29.742 | 427 | 250 | 10 | 5 | 400 | 22 | 429 | 7.70e-47 | 167 |
| MS.gene98219.t1 | MTR_5g096840 | 29.638 | 442 | 263 | 13 | 24 | 426 | 30 | 462 | 3.01e-45 | 163 |
| MS.gene98219.t1 | MTR_1g007270 | 28.675 | 415 | 259 | 12 | 15 | 400 | 28 | 434 | 2.06e-44 | 161 |
| MS.gene98219.t1 | MTR_1g029750 | 28.947 | 418 | 251 | 10 | 24 | 402 | 36 | 446 | 2.45e-43 | 159 |
| MS.gene98219.t1 | MTR_3g461440 | 28.706 | 425 | 264 | 11 | 9 | 400 | 11 | 429 | 2.67e-43 | 158 |
| MS.gene98219.t1 | MTR_8g094290 | 26.652 | 469 | 282 | 12 | 2 | 432 | 24 | 468 | 5.77e-43 | 157 |
| MS.gene98219.t1 | MTR_3g096840 | 28.884 | 457 | 265 | 13 | 24 | 436 | 40 | 480 | 1.41e-42 | 156 |
| MS.gene98219.t1 | MTR_3g110660 | 33.333 | 330 | 186 | 9 | 11 | 316 | 23 | 342 | 1.60e-42 | 154 |
| MS.gene98219.t1 | MTR_3g461470 | 28.774 | 424 | 265 | 11 | 9 | 400 | 11 | 429 | 3.36e-42 | 155 |
| MS.gene98219.t1 | MTR_1g007240 | 27.273 | 462 | 282 | 14 | 15 | 436 | 7 | 454 | 6.50e-42 | 154 |
| MS.gene98219.t1 | MTR_3g061390 | 28.678 | 401 | 247 | 9 | 34 | 400 | 34 | 429 | 1.74e-40 | 150 |
| MS.gene98219.t1 | MTR_5g096850 | 28.442 | 443 | 267 | 14 | 24 | 426 | 26 | 458 | 2.17e-40 | 150 |
| MS.gene98219.t1 | MTR_1g492640 | 30.172 | 348 | 224 | 8 | 101 | 436 | 7 | 347 | 1.54e-39 | 145 |
| MS.gene98219.t1 | MTR_3g088465 | 30.890 | 382 | 232 | 14 | 4 | 365 | 18 | 387 | 3.64e-39 | 145 |
| MS.gene98219.t1 | MTR_3g110430 | 25.541 | 462 | 301 | 12 | 2 | 425 | 36 | 492 | 7.54e-39 | 147 |
| MS.gene98219.t1 | MTR_2g031750 | 25.968 | 439 | 268 | 12 | 24 | 417 | 13 | 439 | 4.03e-37 | 141 |
| MS.gene98219.t1 | MTR_3g461430 | 26.065 | 399 | 260 | 9 | 34 | 400 | 41 | 436 | 2.33e-36 | 140 |
| MS.gene98219.t1 | MTR_1g007180 | 26.039 | 457 | 285 | 13 | 21 | 436 | 10 | 454 | 6.11e-36 | 138 |
| MS.gene98219.t1 | MTR_4g104510 | 27.735 | 393 | 265 | 13 | 51 | 436 | 68 | 448 | 9.37e-36 | 137 |
| MS.gene98219.t1 | MTR_4g104510 | 27.296 | 392 | 266 | 12 | 51 | 436 | 68 | 446 | 1.49e-35 | 137 |
| MS.gene98219.t1 | MTR_1g492640 | 31.773 | 299 | 186 | 7 | 25 | 312 | 43 | 334 | 2.28e-34 | 132 |
| MS.gene98219.t1 | MTR_3g110420 | 24.894 | 470 | 306 | 13 | 5 | 435 | 6 | 467 | 4.06e-34 | 133 |
| MS.gene98219.t1 | MTR_1g492640 | 31.773 | 299 | 186 | 7 | 25 | 312 | 61 | 352 | 4.07e-34 | 131 |
| MS.gene98219.t1 | MTR_3g085800 | 62.963 | 81 | 30 | 0 | 356 | 436 | 4 | 84 | 2.30e-31 | 115 |
| MS.gene98219.t1 | MTR_3g461440 | 28.819 | 288 | 176 | 6 | 136 | 400 | 11 | 292 | 7.77e-31 | 121 |
| MS.gene98219.t1 | MTR_5g081630 | 26.531 | 392 | 271 | 12 | 51 | 436 | 1 | 381 | 9.22e-28 | 114 |
| MS.gene98219.t1 | MTR_2g031750 | 25.000 | 376 | 228 | 11 | 84 | 417 | 9 | 372 | 1.70e-25 | 107 |
| MS.gene98219.t1 | MTR_4g055637 | 31.481 | 216 | 131 | 5 | 231 | 436 | 168 | 376 | 2.83e-22 | 98.2 |
| MS.gene98219.t1 | MTR_3g110420 | 25.449 | 334 | 220 | 11 | 5 | 316 | 6 | 332 | 4.31e-21 | 94.4 |
| MS.gene98219.t1 | MTR_3g069960 | 26.615 | 387 | 241 | 14 | 69 | 436 | 19 | 381 | 8.92e-21 | 94.0 |
| MS.gene98219.t1 | MTR_1g007180 | 24.415 | 299 | 199 | 6 | 162 | 436 | 75 | 370 | 1.26e-20 | 93.2 |
| MS.gene98219.t1 | MTR_3g069960 | 26.615 | 387 | 241 | 14 | 69 | 436 | 72 | 434 | 1.45e-20 | 94.0 |
| MS.gene98219.t1 | MTR_3g465510 | 24.601 | 439 | 293 | 15 | 3 | 428 | 17 | 430 | 1.68e-20 | 93.6 |
| MS.gene98219.t1 | MTR_8g467180 | 23.214 | 392 | 263 | 15 | 21 | 399 | 11 | 377 | 1.64e-19 | 90.5 |
| MS.gene98219.t1 | MTR_3g465440 | 23.261 | 417 | 284 | 13 | 25 | 431 | 47 | 437 | 3.50e-19 | 90.9 |
| MS.gene98219.t1 | MTR_7g010790 | 25.515 | 388 | 239 | 12 | 22 | 391 | 37 | 392 | 2.22e-18 | 87.4 |
| MS.gene98219.t1 | MTR_1g094620 | 25.182 | 413 | 272 | 15 | 8 | 411 | 137 | 521 | 4.56e-18 | 87.0 |
| MS.gene98219.t1 | MTR_7g010750 | 25.806 | 403 | 246 | 12 | 9 | 390 | 20 | 390 | 5.97e-18 | 85.9 |
| MS.gene98219.t1 | MTR_1g094620 | 25.238 | 420 | 270 | 16 | 8 | 411 | 137 | 528 | 8.80e-18 | 85.9 |
| MS.gene98219.t1 | MTR_8g467190 | 22.335 | 394 | 276 | 10 | 15 | 399 | 4 | 376 | 2.11e-17 | 84.0 |
| MS.gene98219.t1 | MTR_1g492640 | 28.500 | 200 | 140 | 2 | 25 | 222 | 43 | 241 | 1.08e-16 | 80.1 |
| MS.gene98219.t1 | MTR_8g465310 | 21.914 | 397 | 259 | 12 | 15 | 392 | 4 | 368 | 1.92e-16 | 81.3 |
| MS.gene98219.t1 | MTR_3g033730 | 25.132 | 378 | 242 | 12 | 31 | 395 | 47 | 396 | 2.09e-16 | 81.3 |
| MS.gene98219.t1 | MTR_1g492640 | 28.500 | 200 | 140 | 2 | 25 | 222 | 61 | 259 | 2.54e-16 | 79.3 |
| MS.gene98219.t1 | MTR_5g017200 | 31.858 | 226 | 139 | 6 | 34 | 248 | 39 | 260 | 3.23e-16 | 79.0 |
| MS.gene98219.t1 | MTR_7g062410 | 22.481 | 387 | 261 | 14 | 21 | 394 | 31 | 391 | 8.25e-16 | 79.3 |
| MS.gene98219.t1 | MTR_4g033275 | 33.333 | 96 | 61 | 2 | 313 | 405 | 4 | 99 | 6.53e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98219.t1 | AT5G40780 | 83.753 | 437 | 69 | 1 | 2 | 436 | 10 | 446 | 0.0 | 766 |
| MS.gene98219.t1 | AT1G48640 | 78.621 | 435 | 92 | 1 | 2 | 436 | 20 | 453 | 0.0 | 709 |
| MS.gene98219.t1 | AT5G40780 | 84.171 | 398 | 63 | 0 | 39 | 436 | 1 | 398 | 0.0 | 701 |
| MS.gene98219.t1 | AT5G40780 | 84.171 | 398 | 63 | 0 | 39 | 436 | 1 | 398 | 0.0 | 701 |
| MS.gene98219.t1 | AT1G24400 | 78.689 | 427 | 91 | 0 | 10 | 436 | 15 | 441 | 0.0 | 674 |
| MS.gene98219.t1 | AT1G67640 | 77.986 | 427 | 94 | 0 | 10 | 436 | 15 | 441 | 0.0 | 654 |
| MS.gene98219.t1 | AT1G61270 | 64.679 | 436 | 150 | 2 | 2 | 433 | 10 | 445 | 0.0 | 593 |
| MS.gene98219.t1 | AT3G01760 | 64.302 | 437 | 148 | 4 | 2 | 431 | 7 | 442 | 0.0 | 583 |
| MS.gene98219.t1 | AT1G25530 | 62.326 | 430 | 162 | 0 | 7 | 436 | 11 | 440 | 0.0 | 539 |
| MS.gene98219.t1 | AT1G71680 | 58.199 | 433 | 180 | 1 | 5 | 436 | 16 | 448 | 9.70e-172 | 489 |
| MS.gene98219.t1 | AT1G71680 | 58.908 | 348 | 142 | 1 | 5 | 351 | 16 | 363 | 1.76e-142 | 411 |
| MS.gene98219.t1 | AT1G47670 | 37.358 | 439 | 263 | 5 | 8 | 435 | 78 | 515 | 1.74e-93 | 291 |
| MS.gene98219.t1 | AT4G35180 | 33.813 | 417 | 255 | 8 | 14 | 416 | 48 | 457 | 3.17e-68 | 224 |
| MS.gene98219.t1 | AT1G10010 | 32.688 | 465 | 257 | 13 | 12 | 433 | 18 | 469 | 3.54e-60 | 203 |
| MS.gene98219.t1 | AT1G10010 | 32.688 | 465 | 257 | 13 | 12 | 433 | 19 | 470 | 5.29e-60 | 203 |
| MS.gene98219.t1 | AT1G08230 | 30.649 | 447 | 289 | 8 | 5 | 436 | 9 | 449 | 1.60e-59 | 201 |
| MS.gene98219.t1 | AT5G41800 | 29.508 | 427 | 279 | 9 | 25 | 436 | 28 | 447 | 4.14e-58 | 197 |
| MS.gene98219.t1 | AT1G58360 | 31.126 | 453 | 260 | 14 | 22 | 432 | 35 | 477 | 1.12e-53 | 186 |
| MS.gene98219.t1 | AT4G35180 | 36.594 | 276 | 165 | 4 | 14 | 284 | 48 | 318 | 2.11e-53 | 182 |
| MS.gene98219.t1 | AT5G49630 | 30.989 | 455 | 260 | 13 | 22 | 432 | 31 | 475 | 2.87e-48 | 172 |
| MS.gene98219.t1 | AT5G09220 | 28.731 | 449 | 272 | 11 | 24 | 432 | 46 | 486 | 4.88e-48 | 171 |
| MS.gene98219.t1 | AT5G63850 | 29.111 | 450 | 269 | 12 | 24 | 432 | 19 | 459 | 2.06e-46 | 167 |
| MS.gene98219.t1 | AT1G44100 | 28.478 | 460 | 279 | 12 | 15 | 432 | 22 | 473 | 1.40e-45 | 164 |
| MS.gene98219.t1 | AT1G77380 | 29.194 | 459 | 280 | 11 | 11 | 432 | 19 | 469 | 2.32e-45 | 164 |
| MS.gene98219.t1 | AT1G08230 | 30.704 | 355 | 227 | 7 | 95 | 436 | 1 | 349 | 6.68e-41 | 149 |
| MS.gene98219.t1 | AT5G23810 | 28.538 | 424 | 247 | 12 | 22 | 400 | 24 | 436 | 1.76e-38 | 145 |
| MS.gene98219.t1 | AT1G08230 | 30.816 | 331 | 210 | 7 | 119 | 436 | 6 | 330 | 4.25e-38 | 141 |
| MS.gene98219.t1 | AT1G08230 | 30.816 | 331 | 210 | 7 | 119 | 436 | 6 | 330 | 4.25e-38 | 141 |
| MS.gene98219.t1 | AT1G08230 | 30.816 | 331 | 210 | 7 | 119 | 436 | 6 | 330 | 4.25e-38 | 141 |
| MS.gene98219.t1 | AT3G55740 | 27.009 | 448 | 293 | 21 | 5 | 436 | 8 | 437 | 4.94e-27 | 112 |
| MS.gene98219.t1 | AT3G55740 | 27.820 | 399 | 257 | 19 | 51 | 436 | 1 | 381 | 1.31e-26 | 110 |
| MS.gene98219.t1 | AT3G55740 | 27.820 | 399 | 257 | 19 | 51 | 436 | 1 | 381 | 1.31e-26 | 110 |
| MS.gene98219.t1 | AT5G23810 | 28.834 | 326 | 195 | 10 | 22 | 321 | 24 | 338 | 1.57e-26 | 110 |
| MS.gene98219.t1 | AT2G36590 | 25.926 | 405 | 282 | 13 | 12 | 408 | 12 | 406 | 3.62e-26 | 110 |
| MS.gene98219.t1 | AT2G39890 | 25.566 | 442 | 295 | 17 | 11 | 436 | 17 | 440 | 1.49e-25 | 108 |
| MS.gene98219.t1 | AT2G39890 | 25.566 | 442 | 295 | 17 | 11 | 436 | 17 | 440 | 1.49e-25 | 108 |
| MS.gene98219.t1 | AT2G39890 | 26.065 | 399 | 264 | 15 | 51 | 436 | 1 | 381 | 1.68e-25 | 107 |
| MS.gene98219.t1 | AT5G15240 | 24.318 | 403 | 253 | 12 | 4 | 390 | 17 | 383 | 9.87e-21 | 94.4 |
| MS.gene98219.t1 | AT2G36590 | 27.010 | 311 | 211 | 12 | 12 | 316 | 12 | 312 | 1.14e-16 | 81.3 |
| MS.gene98219.t1 | AT5G23810 | 28.099 | 242 | 141 | 8 | 22 | 239 | 24 | 256 | 2.63e-15 | 76.3 |
| MS.gene98219.t1 | AT5G02170 | 23.274 | 391 | 263 | 12 | 16 | 394 | 125 | 490 | 3.74e-14 | 74.7 |
| MS.gene98219.t1 | AT5G02170 | 23.822 | 382 | 243 | 11 | 16 | 394 | 125 | 461 | 4.26e-14 | 74.3 |
| MS.gene98219.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
| MS.gene98219.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
| MS.gene98219.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
| MS.gene98219.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
| MS.gene98219.t1 | AT3G09340 | 23.387 | 372 | 255 | 12 | 31 | 394 | 139 | 488 | 7.73e-14 | 73.9 |
| MS.gene98219.t1 | AT3G09330 | 23.387 | 372 | 255 | 12 | 31 | 394 | 139 | 488 | 1.47e-13 | 72.8 |
| MS.gene98219.t1 | AT2G39130 | 22.807 | 399 | 271 | 15 | 6 | 394 | 142 | 513 | 1.13e-12 | 70.1 |
| MS.gene98219.t1 | AT2G39130 | 22.807 | 399 | 271 | 15 | 6 | 394 | 142 | 513 | 1.13e-12 | 70.1 |
| MS.gene98219.t1 | AT2G41190 | 22.500 | 400 | 287 | 9 | 33 | 428 | 154 | 534 | 1.68e-12 | 69.7 |
| MS.gene98219.t1 | AT2G41190 | 24.405 | 336 | 231 | 9 | 33 | 364 | 154 | 470 | 1.81e-11 | 66.2 |
| MS.gene98219.t1 | AT3G11900 | 20.244 | 410 | 288 | 11 | 36 | 426 | 41 | 430 | 3.50e-11 | 65.1 |
| MS.gene98219.t1 | AT3G11900 | 20.244 | 410 | 288 | 11 | 36 | 426 | 41 | 430 | 3.50e-11 | 65.1 |
| MS.gene98219.t1 | AT2G39130 | 23.118 | 372 | 249 | 15 | 6 | 367 | 142 | 486 | 9.65e-11 | 63.9 |
Find 85 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACTTGAACTCTATTTC+TGG | 0.163457 | 7.1:-57454298 | MS.gene98219:CDS |
| AATCATAATTCTTTGCATTA+AGG | 0.219316 | 7.1:+57452942 | None:intergenic |
| CAGTTGCTCTCATTGGTTAT+TGG | 0.237858 | 7.1:-57453829 | MS.gene98219:CDS |
| GTTATAGAAAATGTTGATTA+TGG | 0.261549 | 7.1:-57454049 | MS.gene98219:CDS |
| GCATTTCTTGACGAACTAAT+TGG | 0.266230 | 7.1:+57454937 | None:intergenic |
| TCATCACATTATACACATTA+TGG | 0.272434 | 7.1:-57454591 | MS.gene98219:CDS |
| CTCATTGGTTATTGGATGTT+TGG | 0.296914 | 7.1:-57453821 | MS.gene98219:CDS |
| TTTGTTGTTATCCATGTTAT+TGG | 0.301091 | 7.1:-57453728 | MS.gene98219:CDS |
| CCAGAAATAGAGTTCAAGTT+AGG | 0.313363 | 7.1:+57454298 | None:intergenic |
| TACTTTCCAGTTGCTCTCAT+TGG | 0.318123 | 7.1:-57453836 | MS.gene98219:CDS |
| GCCATTGCAATAAGCCAGTT+TGG | 0.365199 | 7.1:+57453758 | None:intergenic |
| TTCGGTTTCTTCAATGCCCT+TGG | 0.366530 | 7.1:-57453995 | MS.gene98219:CDS |
| GGAGATTCAGCTTGTCTTGG+TGG | 0.374415 | 7.1:-57453155 | MS.gene98219:CDS |
| TAGCTTACAAAGTATGTTGT+TGG | 0.377102 | 7.1:+57453293 | None:intergenic |
| CCAAGTTGCGCCATGGCATA+AGG | 0.384842 | 7.1:+57454850 | None:intergenic |
| AAGAAACCGAAGACAGTTCC+TGG | 0.385660 | 7.1:+57454007 | None:intergenic |
| AACATTGTCTACATGGTAAC+TGG | 0.392632 | 7.1:-57454433 | MS.gene98219:CDS |
| GAACTGGGTCAATATGCTTT+TGG | 0.394335 | 7.1:-57454514 | MS.gene98219:CDS |
| CAATAACCAATGAGAGCAAC+TGG | 0.394586 | 7.1:+57453830 | None:intergenic |
| GTTCGTCAAGAAATGCAAAA+TGG | 0.402237 | 7.1:-57454930 | MS.gene98219:CDS |
| GTTTCAATCATGTCAAATAC+TGG | 0.407218 | 7.1:+57453571 | None:intergenic |
| GCACAAAGCTACAACTATAT+AGG | 0.415908 | 7.1:+57453859 | None:intergenic |
| CTCCACATAGGACCCTTAGA+TGG | 0.416492 | 7.1:+57453896 | None:intergenic |
| ATTATACACATTATGGCAAA+TGG | 0.425573 | 7.1:-57454584 | MS.gene98219:CDS |
| CTTCAATGCCCTTGGAGATG+TGG | 0.427219 | 7.1:-57453987 | MS.gene98219:CDS |
| ATTGACCTCAATCCTCCAAT+AGG | 0.449419 | 7.1:+57452968 | None:intergenic |
| CAGTTACTCTACAATTGCTT+GGG | 0.463934 | 7.1:-57454092 | MS.gene98219:CDS |
| TATCACCTATTGGAGGATTG+AGG | 0.465217 | 7.1:-57452973 | MS.gene98219:CDS |
| GCAGTTACTCTACAATTGCT+TGG | 0.470215 | 7.1:-57454093 | MS.gene98219:intron |
| CAAGACAAGCTGAATCTCCT+TGG | 0.473939 | 7.1:+57453159 | None:intergenic |
| ATATAGGTTTGCATTGTGCT+TGG | 0.474894 | 7.1:-57453013 | MS.gene98219:intron |
| ACTACCCCAGGAACTGTCTT+CGG | 0.476626 | 7.1:-57454013 | MS.gene98219:CDS |
| CCTTATGCCATGGCGCAACT+TGG | 0.477863 | 7.1:-57454850 | MS.gene98219:CDS |
| CCGCCGCTATCATGTCGTTA+AGG | 0.478143 | 7.1:-57454264 | MS.gene98219:intron |
| TGGGCAGCTTCTGCTCATAA+AGG | 0.483954 | 7.1:-57454073 | MS.gene98219:CDS |
| CACAATGTTACTGCCATGGT+TGG | 0.488589 | 7.1:-57454892 | MS.gene98219:CDS |
| CAGAAATAGAGTTCAAGTTA+GGG | 0.490914 | 7.1:+57454299 | None:intergenic |
| CCATGTTATTGGAAGCTACC+AGG | 0.495046 | 7.1:-57453717 | MS.gene98219:intron |
| CGGCGTTAACATTGTCTACA+TGG | 0.498519 | 7.1:-57454440 | MS.gene98219:CDS |
| TATTGTACGAAATGTGTATG+TGG | 0.498916 | 7.1:-57453500 | MS.gene98219:CDS |
| CAAGGAGATTCAGCTTGTCT+TGG | 0.504542 | 7.1:-57453158 | MS.gene98219:CDS |
| CAAGTTGCGCCATGGCATAA+GGG | 0.504930 | 7.1:+57454851 | None:intergenic |
| TGACTTTAGAGAAACCAAAC+TGG | 0.513027 | 7.1:-57453772 | MS.gene98219:CDS |
| ATGCCATGGCGCAACTTGGA+TGG | 0.528431 | 7.1:-57454846 | MS.gene98219:intron |
| CCTGGTAGCTTCCAATAACA+TGG | 0.529595 | 7.1:+57453717 | None:intergenic |
| GTTACTGCCATGGTTGGAGC+TGG | 0.535918 | 7.1:-57454886 | MS.gene98219:CDS |
| ATTGTACGAAATGTGTATGT+GGG | 0.542188 | 7.1:-57453499 | MS.gene98219:intron |
| TCTTAGTCTCCCTTATGCCA+TGG | 0.544235 | 7.1:-57454860 | MS.gene98219:CDS |
| TTCAGCTACCATGCATAATG+TGG | 0.558234 | 7.1:-57453197 | MS.gene98219:intron |
| AATGGTTGAGATGCATGAAA+TGG | 0.559811 | 7.1:-57454566 | MS.gene98219:CDS |
| ACCAAACTGGCTTATTGCAA+TGG | 0.573822 | 7.1:-57453759 | MS.gene98219:CDS |
| TACAAAGCTACGACTACCCC+AGG | 0.575799 | 7.1:-57454025 | MS.gene98219:CDS |
| TAACAGTATTAGTCCTCTCA+TGG | 0.577651 | 7.1:-57454615 | MS.gene98219:CDS |
| GAGATGCATGAAATGGTACC+TGG | 0.577821 | 7.1:-57454559 | MS.gene98219:CDS |
| CAACAACTTATTGTTGAAGT+CGG | 0.582713 | 7.1:-57454460 | MS.gene98219:CDS |
| AAGCAAAAGCCACATCTCCA+AGG | 0.583498 | 7.1:+57453978 | None:intergenic |
| CAACCATGGCAGTAACATTG+TGG | 0.590369 | 7.1:+57454893 | None:intergenic |
| ATAAAACGCAACATTGTGGT+AGG | 0.595326 | 7.1:+57453520 | None:intergenic |
| TACAATAAAACGCAACATTG+TGG | 0.602420 | 7.1:+57453516 | None:intergenic |
| ACAATCACTCCTCTCCACAT+AGG | 0.605359 | 7.1:+57453884 | None:intergenic |
| AGAAACCGAAGACAGTTCCT+GGG | 0.607949 | 7.1:+57454008 | None:intergenic |
| AAGAACACCAGCTCCAACCA+TGG | 0.608052 | 7.1:+57454879 | None:intergenic |
| CTAAGATAAAGACATGCACT+TGG | 0.610150 | 7.1:-57455585 | None:intergenic |
| AACCATCTAAGGGTCCTATG+TGG | 0.613202 | 7.1:-57453898 | MS.gene98219:CDS |
| AGGACTAATACTGTTACTCC+AGG | 0.615520 | 7.1:+57454622 | None:intergenic |
| AGCAAAAGCCACATCTCCAA+GGG | 0.623365 | 7.1:+57453979 | None:intergenic |
| AAATAGAGTTCAAGTTAGGG+AGG | 0.624445 | 7.1:+57454302 | None:intergenic |
| ATTGCAAGCCACATTATGCA+TGG | 0.627374 | 7.1:+57453189 | None:intergenic |
| ATACCATCCAAGTTGCGCCA+TGG | 0.632975 | 7.1:+57454843 | None:intergenic |
| ATTCCACAATGTTACTGCCA+TGG | 0.635834 | 7.1:-57454896 | MS.gene98219:CDS |
| AGCAACAATTCCATCTACAC+CGG | 0.636630 | 7.1:-57453924 | MS.gene98219:CDS |
| TTTGATAGATATCATGAACT+GGG | 0.640129 | 7.1:-57454529 | MS.gene98219:CDS |
| TTACCTTAACGACATGATAG+CGG | 0.643182 | 7.1:+57454261 | None:intergenic |
| CGTCAAGAAATGCAAAATGG+TGG | 0.644321 | 7.1:-57454927 | MS.gene98219:CDS |
| ACTTCAACAATAAGTTGTTG+TGG | 0.647739 | 7.1:+57454463 | None:intergenic |
| TGACATGATTGAAACAGTGA+TGG | 0.651752 | 7.1:-57453563 | MS.gene98219:CDS |
| TGCTTATGCTGGACACAACG+TGG | 0.655602 | 7.1:-57453960 | MS.gene98219:CDS |
| GGCTTGCAATCTACAAACCA+AGG | 0.655629 | 7.1:-57453176 | MS.gene98219:CDS |
| GTGAGACAAGACAAAGTGAA+CGG | 0.655631 | 7.1:+57454324 | None:intergenic |
| ATTGTCTACATGGTAACTGG+AGG | 0.663381 | 7.1:-57454430 | MS.gene98219:CDS |
| TCTAAGGGTCCTATGTGGAG+AGG | 0.663638 | 7.1:-57453893 | MS.gene98219:CDS |
| CCTTAACGACATGATAGCGG+CGG | 0.703413 | 7.1:+57454264 | None:intergenic |
| ATAATGTGATGAACCATGAG+AGG | 0.706479 | 7.1:+57454602 | None:intergenic |
| GAAACCGAAGACAGTTCCTG+GGG | 0.710796 | 7.1:+57454009 | None:intergenic |
| AGACAAGACAAAGTGAACGG+AGG | 0.734305 | 7.1:+57454327 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATATGTCAATTTATAT+TGG | + | chr7.1:57455099-57455118 | None:intergenic | 10.0% |
| !! | TTTAAATATTCTTCATTAAA+TGG | - | chr7.1:57455397-57455416 | MS.gene98219:intron | 10.0% |
| !!! | AAAAATTGTTATTTATTTTC+AGG | - | chr7.1:57453855-57453874 | MS.gene98219:CDS | 10.0% |
| !!! | AAAATTGTTATTTATTTTCA+GGG | - | chr7.1:57453856-57453875 | MS.gene98219:CDS | 10.0% |
| !!! | AAGTTTTTATAAAAAAAGAA+GGG | + | chr7.1:57454859-57454878 | None:intergenic | 10.0% |
| !!! | AAATTGTTATTTATTTTCAG+GGG | - | chr7.1:57453857-57453876 | MS.gene98219:CDS | 15.0% |
| !!! | AGATTGTATTTTATTTTGTA+AGG | - | chr7.1:57453357-57453376 | MS.gene98219:CDS | 15.0% |
| !!! | ATTAAGTTTTTTCATTTGAT+AGG | + | chr7.1:57453061-57453080 | None:intergenic | 15.0% |
| !!! | ATTGTATTTTATTTTGTAAG+GGG | - | chr7.1:57453359-57453378 | MS.gene98219:CDS | 15.0% |
| !!! | CAAGTTTTTATAAAAAAAGA+AGG | + | chr7.1:57454860-57454879 | None:intergenic | 15.0% |
| !!! | CGTTTTGATTTTTTATTTTT+CGG | - | chr7.1:57453472-57453491 | MS.gene98219:intron | 15.0% |
| !!! | GATTGTATTTTATTTTGTAA+GGG | - | chr7.1:57453358-57453377 | MS.gene98219:CDS | 15.0% |
| !!! | GTTTTGATTTTTTATTTTTC+GGG | - | chr7.1:57453473-57453492 | MS.gene98219:intron | 15.0% |
| !!! | TTATTTTTTTAATAAGAACC+TGG | - | chr7.1:57455445-57455464 | MS.gene98219:intron | 15.0% |
| !! | AATCATAATTCTTTGCATTA+AGG | + | chr7.1:57455564-57455583 | None:intergenic | 20.0% |
| !! | AGATTGATGAAAAATTAAAG+AGG | - | chr7.1:57453519-57453538 | MS.gene98219:CDS | 20.0% |
| !! | TAACAAAGTAAAATACAATC+CGG | - | chr7.1:57453128-57453147 | MS.gene98219:intron | 20.0% |
| !!! | AAAAAACTTAATAGCTGTTT+TGG | - | chr7.1:57453069-57453088 | MS.gene98219:intron | 20.0% |
| !!! | ATTGTATTTTACTTTGTTAG+GGG | + | chr7.1:57453127-57453146 | None:intergenic | 20.0% |
| !!! | CTTGTTTTCATTGATAATAT+AGG | - | chr7.1:57455474-57455493 | MS.gene98219:intron | 20.0% |
| !!! | GATTGTATTTTACTTTGTTA+GGG | + | chr7.1:57453128-57453147 | None:intergenic | 20.0% |
| !!! | GTTATAGAAAATGTTGATTA+TGG | - | chr7.1:57454454-57454473 | MS.gene98219:CDS | 20.0% |
| !!! | TAACAATTTTTGAGATTCAT+TGG | + | chr7.1:57453846-57453865 | None:intergenic | 20.0% |
| !!! | TCATATTGATTGATTAAAGA+CGG | + | chr7.1:57454292-57454311 | None:intergenic | 20.0% |
| !!! | TTGTATTTTATTTTGTAAGG+GGG | - | chr7.1:57453360-57453379 | MS.gene98219:CDS | 20.0% |
| !!! | TTTCTTATGTCCTTTTTTAT+TGG | + | chr7.1:57453434-57453453 | None:intergenic | 20.0% |
| ! | AAAACATCCATAAAATTCAG+AGG | + | chr7.1:57453748-57453767 | None:intergenic | 25.0% |
| ! | AAGGACATAAGAAATTCATT+CGG | - | chr7.1:57453440-57453459 | MS.gene98219:intron | 25.0% |
| ! | ATTATACACATTATGGCAAA+TGG | - | chr7.1:57453919-57453938 | MS.gene98219:CDS | 25.0% |
| ! | TCATCACATTATACACATTA+TGG | - | chr7.1:57453912-57453931 | MS.gene98219:CDS | 25.0% |
| ! | TGCTATCAAACCAATAAAAA+AGG | - | chr7.1:57453421-57453440 | MS.gene98219:intron | 25.0% |
| ! | TTTCATTTGATAGGTACTAA+AGG | + | chr7.1:57453052-57453071 | None:intergenic | 25.0% |
| ! | TTTGATAGATATCATGAACT+GGG | - | chr7.1:57453974-57453993 | MS.gene98219:CDS | 25.0% |
| !! | CATTTAACCTCTGAATTTTA+TGG | - | chr7.1:57453738-57453757 | MS.gene98219:CDS | 25.0% |
| !! | GAATCAAAAAATTGCGATTT+TGG | - | chr7.1:57453100-57453119 | MS.gene98219:intron | 25.0% |
| !! | GGATTGTATTTTACTTTGTT+AGG | + | chr7.1:57453129-57453148 | None:intergenic | 25.0% |
| !! | TTGTATTTTACTTTGTTAGG+GGG | + | chr7.1:57453126-57453145 | None:intergenic | 25.0% |
| !! | TTTTGATAGATATCATGAAC+TGG | - | chr7.1:57453973-57453992 | MS.gene98219:CDS | 25.0% |
| !!! | CAATTTGATTTTTTTGCAGT+CGG | + | chr7.1:57454134-57454153 | None:intergenic | 25.0% |
| !!! | GCAATTTTTTGATTCTTAAG+AGG | + | chr7.1:57453095-57453114 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTATCCATGTTAT+TGG | - | chr7.1:57454775-57454794 | MS.gene98219:intron | 25.0% |
| AATGAAAACAAGATTAGACC+AGG | + | chr7.1:57455466-57455485 | None:intergenic | 30.0% | |
| ACTTCAACAATAAGTTGTTG+TGG | + | chr7.1:57454043-57454062 | None:intergenic | 30.0% | |
| ATTGTACGAAATGTGTATGT+GGG | - | chr7.1:57455004-57455023 | MS.gene98219:intron | 30.0% | |
| CAACAACTTATTGTTGAAGT+CGG | - | chr7.1:57454043-57454062 | MS.gene98219:CDS | 30.0% | |
| GATTGATTAAAGACGGTAAA+TGG | + | chr7.1:57454285-57454304 | None:intergenic | 30.0% | |
| GTTTCAATCATGTCAAATAC+TGG | + | chr7.1:57454935-57454954 | None:intergenic | 30.0% | |
| TACAATAAAACGCAACATTG+TGG | + | chr7.1:57454990-57455009 | None:intergenic | 30.0% | |
| TAGCTTACAAAGTATGTTGT+TGG | + | chr7.1:57455213-57455232 | None:intergenic | 30.0% | |
| TATCACTTTCCATGAAGTTT+GGG | - | chr7.1:57452961-57452980 | MS.gene98219:CDS | 30.0% | |
| TATTGTACGAAATGTGTATG+TGG | - | chr7.1:57455003-57455022 | MS.gene98219:intron | 30.0% | |
| TTATCACTTTCCATGAAGTT+TGG | - | chr7.1:57452960-57452979 | MS.gene98219:CDS | 30.0% | |
| ! | ATATGCTTTTGGTGAAAAGT+TGG | - | chr7.1:57454000-57454019 | MS.gene98219:CDS | 30.0% |
| ! | CAGAAATAGAGTTCAAGTTA+GGG | + | chr7.1:57454207-57454226 | None:intergenic | 30.0% |
| ! | TATCTATCAAAACGTTTTCC+AGG | + | chr7.1:57453965-57453984 | None:intergenic | 30.0% |
| ! | TATGCTTTTGGTGAAAAGTT+GGG | - | chr7.1:57454001-57454020 | MS.gene98219:CDS | 30.0% |
| ! | TTGATGCTTTTATCACCTAT+TGG | - | chr7.1:57455520-57455539 | MS.gene98219:intron | 30.0% |
| !! | GCTATTACTTTTCCGTTTTT+CGG | - | chr7.1:57455150-57455169 | MS.gene98219:intron | 30.0% |
| !!! | GTTTTTTTAAAGTCAGAAGC+AGG | - | chr7.1:57453013-57453032 | MS.gene98219:intron | 30.0% |
| !!! | TATTGGTTTGATAGCAGTTT+TGG | + | chr7.1:57453417-57453436 | None:intergenic | 30.0% |
| AACATTGTCTACATGGTAAC+TGG | - | chr7.1:57454070-57454089 | MS.gene98219:CDS | 35.0% | |
| AAGCAATTGTAGAGTAACTG+CGG | + | chr7.1:57454411-57454430 | None:intergenic | 35.0% | |
| AATGGTTGAGATGCATGAAA+TGG | - | chr7.1:57453937-57453956 | MS.gene98219:CDS | 35.0% | |
| ATAAAACGCAACATTGTGGT+AGG | + | chr7.1:57454986-57455005 | None:intergenic | 35.0% | |
| ATAATGTGATGAACCATGAG+AGG | + | chr7.1:57453904-57453923 | None:intergenic | 35.0% | |
| ATATAGGTTTGCATTGTGCT+TGG | - | chr7.1:57455490-57455509 | MS.gene98219:intron | 35.0% | |
| ATCATGTCGTTAAGGTAATG+AGG | - | chr7.1:57454247-57454266 | MS.gene98219:intron | 35.0% | |
| CAGTTACTCTACAATTGCTT+GGG | - | chr7.1:57454411-57454430 | MS.gene98219:CDS | 35.0% | |
| CCTAACTTGAACTCTATTTC+TGG | - | chr7.1:57454205-57454224 | MS.gene98219:intron | 35.0% | |
| GCACAAAGCTACAACTATAT+AGG | + | chr7.1:57454647-57454666 | None:intergenic | 35.0% | |
| GCATTTCTTGACGAACTAAT+TGG | + | chr7.1:57453569-57453588 | None:intergenic | 35.0% | |
| GTTCGTCAAGAAATGCAAAA+TGG | - | chr7.1:57453573-57453592 | MS.gene98219:CDS | 35.0% | |
| TAACAGTATTAGTCCTCTCA+TGG | - | chr7.1:57453888-57453907 | MS.gene98219:CDS | 35.0% | |
| TACTCTTAAGACTCCTCATT+AGG | - | chr7.1:57453789-57453808 | MS.gene98219:CDS | 35.0% | |
| TGAAATTGAGTTTCATCACC+TGG | + | chr7.1:57454807-57454826 | None:intergenic | 35.0% | |
| TGACATGATTGAAACAGTGA+TGG | - | chr7.1:57454940-57454959 | MS.gene98219:CDS | 35.0% | |
| TGTATTGAAGTCACCTAATG+AGG | + | chr7.1:57453805-57453824 | None:intergenic | 35.0% | |
| TTACCTTAACGACATGATAG+CGG | + | chr7.1:57454245-57454264 | None:intergenic | 35.0% | |
| ! | AAATAGAGTTCAAGTTAGGG+AGG | + | chr7.1:57454204-57454223 | None:intergenic | 35.0% |
| ! | AGTTTCCTAAATACCGCTTT+TGG | + | chr7.1:57453337-57453356 | None:intergenic | 35.0% |
| ! | ATGCTTTTATCACCTATTGG+AGG | - | chr7.1:57455523-57455542 | MS.gene98219:intron | 35.0% |
| ! | CCAGAAATAGAGTTCAAGTT+AGG | + | chr7.1:57454208-57454227 | None:intergenic | 35.0% |
| ! | CTCATTGGTTATTGGATGTT+TGG | - | chr7.1:57454682-57454701 | MS.gene98219:intron | 35.0% |
| ! | TGACTTTAGAGAAACCAAAC+TGG | - | chr7.1:57454731-57454750 | MS.gene98219:intron | 35.0% |
| !! | AGCAATGACTTGGTCAAAAT+TGG | + | chr7.1:57453193-57453212 | None:intergenic | 35.0% |
| !! | AGCATTGACTTGGTCAAAAT+TGG | - | chr7.1:57453304-57453323 | MS.gene98219:CDS | 35.0% |
| !! | ATTACTTTTCCGTTTTTCGG+TGG | - | chr7.1:57455153-57455172 | MS.gene98219:intron | 35.0% |
| !! | TTATTTATTTTCAGGGGTCC+TGG | - | chr7.1:57453863-57453882 | MS.gene98219:CDS | 35.0% |
| ACACCGGAAAAACCATCTAA+GGG | - | chr7.1:57454595-57454614 | MS.gene98219:CDS | 40.0% | |
| AGCAACAATTCCATCTACAC+CGG | - | chr7.1:57454579-57454598 | MS.gene98219:CDS | 40.0% | |
| AGGACTAATACTGTTACTCC+AGG | + | chr7.1:57453884-57453903 | None:intergenic | 40.0% | |
| ATGTCGTTAAGGTAATGAGG+AGG | - | chr7.1:57454250-57454269 | MS.gene98219:intron | 40.0% | |
| ATTCCACAATGTTACTGCCA+TGG | - | chr7.1:57453607-57453626 | MS.gene98219:intron | 40.0% | |
| ATTGACCTCAATCCTCCAAT+AGG | + | chr7.1:57455538-57455557 | None:intergenic | 40.0% | |
| ATTGCAAGCCACATTATGCA+TGG | + | chr7.1:57455317-57455336 | None:intergenic | 40.0% | |
| ATTGTCTACATGGTAACTGG+AGG | - | chr7.1:57454073-57454092 | MS.gene98219:CDS | 40.0% | |
| CAAAAGGGACAGTACTTAGA+GGG | + | chr7.1:57453154-57453173 | None:intergenic | 40.0% | |
| CAATAACCAATGAGAGCAAC+TGG | + | chr7.1:57454676-57454695 | None:intergenic | 40.0% | |
| CGCAACTTCCTAATACTTAG+CGG | - | chr7.1:57453390-57453409 | MS.gene98219:intron | 40.0% | |
| CGTCAAGAAATGCAAAATGG+TGG | - | chr7.1:57453576-57453595 | MS.gene98219:CDS | 40.0% | |
| CTAATAGCTCCCAAACTTCA+TGG | + | chr7.1:57452973-57452992 | None:intergenic | 40.0% | |
| CTGAGACCAAAACTGCAAAA+GGG | + | chr7.1:57453169-57453188 | None:intergenic | 40.0% | |
| GCAACTTCCTAATACTTAGC+GGG | - | chr7.1:57453391-57453410 | MS.gene98219:intron | 40.0% | |
| GCAGTTACTCTACAATTGCT+TGG | - | chr7.1:57454410-57454429 | MS.gene98219:CDS | 40.0% | |
| GTGAGACAAGACAAAGTGAA+CGG | + | chr7.1:57454182-57454201 | None:intergenic | 40.0% | |
| TACACCGGAAAAACCATCTA+AGG | - | chr7.1:57454594-57454613 | MS.gene98219:CDS | 40.0% | |
| TACTTTCCAGTTGCTCTCAT+TGG | - | chr7.1:57454667-57454686 | MS.gene98219:intron | 40.0% | |
| TATCACCTATTGGAGGATTG+AGG | - | chr7.1:57455530-57455549 | MS.gene98219:intron | 40.0% | |
| TTCAGCTACCATGCATAATG+TGG | - | chr7.1:57455306-57455325 | MS.gene98219:intron | 40.0% | |
| ! | ACCAAACTGGCTTATTGCAA+TGG | - | chr7.1:57454744-57454763 | MS.gene98219:intron | 40.0% |
| ! | CAGTTGCTCTCATTGGTTAT+TGG | - | chr7.1:57454674-57454693 | MS.gene98219:intron | 40.0% |
| ! | GAACTGGGTCAATATGCTTT+TGG | - | chr7.1:57453989-57454008 | MS.gene98219:CDS | 40.0% |
| ! | GGCAAAAAGCAATTGATGAC+TGG | - | chr7.1:57453540-57453559 | MS.gene98219:CDS | 40.0% |
| ! | TACTGTCCCTTTTGCAGTTT+TGG | - | chr7.1:57453160-57453179 | MS.gene98219:CDS | 40.0% |
| ! | TCTGAGACCAAAACTGCAAA+AGG | + | chr7.1:57453170-57453189 | None:intergenic | 40.0% |
| !!! | GGTCTACTAGGATTTTTTGG+TGG | - | chr7.1:57455174-57455193 | MS.gene98219:intron | 40.0% |
| !!! | GGTGGTCTACTAGGATTTTT+TGG | - | chr7.1:57455171-57455190 | MS.gene98219:intron | 40.0% |
| AACCATCTAAGGGTCCTATG+TGG | - | chr7.1:57454605-57454624 | MS.gene98219:CDS | 45.0% | |
| AAGAAACCGAAGACAGTTCC+TGG | + | chr7.1:57454499-57454518 | None:intergenic | 45.0% | |
| AAGCAAAAGCCACATCTCCA+AGG | + | chr7.1:57454528-57454547 | None:intergenic | 45.0% | |
| ACAATCACTCCTCTCCACAT+AGG | + | chr7.1:57454622-57454641 | None:intergenic | 45.0% | |
| AGAAACCGAAGACAGTTCCT+GGG | + | chr7.1:57454498-57454517 | None:intergenic | 45.0% | |
| AGACAAGACAAAGTGAACGG+AGG | + | chr7.1:57454179-57454198 | None:intergenic | 45.0% | |
| AGACCACGTTAGCAATGACT+TGG | + | chr7.1:57453203-57453222 | None:intergenic | 45.0% | |
| AGCAAAAGCCACATCTCCAA+GGG | + | chr7.1:57454527-57454546 | None:intergenic | 45.0% | |
| CAACCATGGCAGTAACATTG+TGG | + | chr7.1:57453613-57453632 | None:intergenic | 45.0% | |
| CAAGACAAGCTGAATCTCCT+TGG | + | chr7.1:57455347-57455366 | None:intergenic | 45.0% | |
| CAAGGAGATTCAGCTTGTCT+TGG | - | chr7.1:57455345-57455364 | MS.gene98219:intron | 45.0% | |
| CACAATGTTACTGCCATGGT+TGG | - | chr7.1:57453611-57453630 | MS.gene98219:intron | 45.0% | |
| CCATGTTATTGGAAGCTACC+AGG | - | chr7.1:57454786-57454805 | MS.gene98219:intron | 45.0% | |
| CCTAGTAGACCACCGAAAAA+CGG | + | chr7.1:57455165-57455184 | None:intergenic | 45.0% | |
| CCTGGTAGCTTCCAATAACA+TGG | + | chr7.1:57454789-57454808 | None:intergenic | 45.0% | |
| CGGCGTTAACATTGTCTACA+TGG | - | chr7.1:57454063-57454082 | MS.gene98219:CDS | 45.0% | |
| GAGATGCATGAAATGGTACC+TGG | - | chr7.1:57453944-57453963 | MS.gene98219:CDS | 45.0% | |
| GCAAAAGGGACAGTACTTAG+AGG | + | chr7.1:57453155-57453174 | None:intergenic | 45.0% | |
| GCAATGAACATTGTGAACGC+TGG | + | chr7.1:57455132-57455151 | None:intergenic | 45.0% | |
| GCCATTGCAATAAGCCAGTT+TGG | + | chr7.1:57454748-57454767 | None:intergenic | 45.0% | |
| GGCTTGCAATCTACAAACCA+AGG | - | chr7.1:57455327-57455346 | MS.gene98219:intron | 45.0% | |
| TCTTAGTCTCCCTTATGCCA+TGG | - | chr7.1:57453643-57453662 | MS.gene98219:intron | 45.0% | |
| TGACCAAGTCATTGCTAACG+TGG | - | chr7.1:57453197-57453216 | MS.gene98219:intron | 45.0% | |
| TTCGGTTTCTTCAATGCCCT+TGG | - | chr7.1:57454508-57454527 | MS.gene98219:CDS | 45.0% | |
| ! | ACTTGGTCAAAATTGGCCTG+GGG | - | chr7.1:57453311-57453330 | MS.gene98219:CDS | 45.0% |
| ! | GACTTGGTCAAAATTGGCCT+GGG | - | chr7.1:57453310-57453329 | MS.gene98219:CDS | 45.0% |
| ! | GATGGTTTTTCCGGTGTAGA+TGG | + | chr7.1:57454592-57454611 | None:intergenic | 45.0% |
| ! | GATGTGGCTTTTGCTTATGC+TGG | - | chr7.1:57454532-57454551 | MS.gene98219:CDS | 45.0% |
| ! | GGACCCTTAGATGGTTTTTC+CGG | + | chr7.1:57454601-57454620 | None:intergenic | 45.0% |
| !! | GTTTTGGCCCGCTAAGTATT+AGG | + | chr7.1:57453401-57453420 | None:intergenic | 45.0% |
| !! | TGACTTGGTCAAAATTGGCC+TGG | - | chr7.1:57453309-57453328 | MS.gene98219:CDS | 45.0% |
| AAGAACACCAGCTCCAACCA+TGG | + | chr7.1:57453627-57453646 | None:intergenic | 50.0% | |
| ACTACCCCAGGAACTGTCTT+CGG | - | chr7.1:57454490-57454509 | MS.gene98219:CDS | 50.0% | |
| ATACCATCCAAGTTGCGCCA+TGG | + | chr7.1:57453663-57453682 | None:intergenic | 50.0% | |
| CAAGTTGCGCCATGGCATAA+GGG | + | chr7.1:57453655-57453674 | None:intergenic | 50.0% | |
| CTCCACATAGGACCCTTAGA+TGG | + | chr7.1:57454610-57454629 | None:intergenic | 50.0% | |
| CTTCAATGCCCTTGGAGATG+TGG | - | chr7.1:57454516-57454535 | MS.gene98219:CDS | 50.0% | |
| GAAACCGAAGACAGTTCCTG+GGG | + | chr7.1:57454497-57454516 | None:intergenic | 50.0% | |
| GGAGATTCAGCTTGTCTTGG+TGG | - | chr7.1:57455348-57455367 | MS.gene98219:intron | 50.0% | |
| TACAAAGCTACGACTACCCC+AGG | - | chr7.1:57454478-57454497 | MS.gene98219:CDS | 50.0% | |
| TCTAAGGGTCCTATGTGGAG+AGG | - | chr7.1:57454610-57454629 | MS.gene98219:CDS | 50.0% | |
| TGACCAAGTCAATGCTGACG+TGG | + | chr7.1:57453300-57453319 | None:intergenic | 50.0% | |
| TGCTTATGCTGGACACAACG+TGG | - | chr7.1:57454543-57454562 | MS.gene98219:CDS | 50.0% | |
| TGGGCAGCTTCTGCTCATAA+AGG | - | chr7.1:57454430-57454449 | MS.gene98219:CDS | 50.0% | |
| TGGGGCCAAAAGCGGTATTT+AGG | - | chr7.1:57453329-57453348 | MS.gene98219:CDS | 50.0% | |
| !! | CCGTTTTTCGGTGGTCTACT+AGG | - | chr7.1:57455162-57455181 | MS.gene98219:intron | 50.0% |
| !! | CCTTAACGACATGATAGCGG+CGG | + | chr7.1:57454242-57454261 | None:intergenic | 50.0% |
| !! | TAAATACCGCTTTTGGCCCC+AGG | + | chr7.1:57453330-57453349 | None:intergenic | 50.0% |
| AGGGACAGTACTTAGAGGGC+CGG | + | chr7.1:57453150-57453169 | None:intergenic | 55.0% | |
| ATGCCATGGCGCAACTTGGA+TGG | - | chr7.1:57453657-57453676 | MS.gene98219:intron | 55.0% | |
| CCAAGTTGCGCCATGGCATA+AGG | + | chr7.1:57453656-57453675 | None:intergenic | 55.0% | |
| CCGCCGCTATCATGTCGTTA+AGG | - | chr7.1:57454239-57454258 | MS.gene98219:intron | 55.0% | |
| CCTTATGCCATGGCGCAACT+TGG | - | chr7.1:57453653-57453672 | MS.gene98219:intron | 55.0% | |
| GTTACTGCCATGGTTGGAGC+TGG | - | chr7.1:57453617-57453636 | MS.gene98219:intron | 55.0% | |
| ! | AATTGGCCTGGGGCCAAAAG+CGG | - | chr7.1:57453321-57453340 | MS.gene98219:CDS | 55.0% |
| !! | CGTCCACGTCAGCATTGACT+TGG | - | chr7.1:57453294-57453313 | MS.gene98219:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 57452931 | 57455594 | 57452931 | ID=MS.gene98219 |
| chr7.1 | mRNA | 57452931 | 57455594 | 57452931 | ID=MS.gene98219.t1;Parent=MS.gene98219 |
| chr7.1 | exon | 57455586 | 57455594 | 57455586 | ID=MS.gene98219.t1.exon1;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57455586 | 57455594 | 57455586 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| chr7.1 | exon | 57454847 | 57455004 | 57454847 | ID=MS.gene98219.t1.exon2;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57454847 | 57455004 | 57454847 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| chr7.1 | exon | 57454265 | 57454648 | 57454265 | ID=MS.gene98219.t1.exon3;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57454265 | 57454648 | 57454265 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| chr7.1 | exon | 57453718 | 57454111 | 57453718 | ID=MS.gene98219.t1.exon4;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57453718 | 57454111 | 57453718 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| chr7.1 | exon | 57453500 | 57453605 | 57453500 | ID=MS.gene98219.t1.exon5;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57453500 | 57453605 | 57453500 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| chr7.1 | exon | 57453301 | 57453392 | 57453301 | ID=MS.gene98219.t1.exon6;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57453301 | 57453392 | 57453301 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| chr7.1 | exon | 57453146 | 57453214 | 57453146 | ID=MS.gene98219.t1.exon7;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57453146 | 57453214 | 57453146 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| chr7.1 | exon | 57452931 | 57453029 | 57452931 | ID=MS.gene98219.t1.exon8;Parent=MS.gene98219.t1 |
| chr7.1 | CDS | 57452931 | 57453029 | 57452931 | ID=cds.MS.gene98219.t1;Parent=MS.gene98219.t1 |
| Gene Sequence |
| Protein sequence |
