Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98307.t1 | KEH34956.1 | 97.5 | 317 | 7 | 1 | 1 | 316 | 29 | 345 | 3.20E-174 | 620.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98307.t1 | Q9ZPE7 | 71.6 | 313 | 82 | 4 | 8 | 316 | 5 | 314 | 2.4e-122 | 439.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98307.t1 | A0A072UZU4 | 97.5 | 317 | 7 | 1 | 1 | 316 | 29 | 345 | 2.3e-174 | 620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051023 | MS.gene98307 | 0.825629 | 4.22E-54 | -1.69E-46 |
| MS.gene059061 | MS.gene98307 | 0.817938 | 2.54E-52 | -1.69E-46 |
| MS.gene059890 | MS.gene98307 | 0.801748 | 7.78E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98307.t1 | MTR_3g074830 | 97.476 | 317 | 7 | 1 | 1 | 316 | 29 | 345 | 0.0 | 632 |
| MS.gene98307.t1 | MTR_5g064360 | 70.533 | 319 | 88 | 4 | 1 | 316 | 1 | 316 | 7.47e-162 | 454 |
| MS.gene98307.t1 | MTR_5g464340 | 71.473 | 319 | 84 | 5 | 1 | 316 | 1 | 315 | 2.68e-161 | 452 |
| MS.gene98307.t1 | MTR_5g064340 | 71.473 | 319 | 84 | 5 | 1 | 316 | 1 | 315 | 2.68e-161 | 452 |
| MS.gene98307.t1 | MTR_5g064345 | 72.115 | 312 | 79 | 5 | 8 | 316 | 9 | 315 | 5.21e-160 | 449 |
| MS.gene98307.t1 | MTR_3g074860 | 70.470 | 298 | 74 | 4 | 19 | 316 | 21 | 304 | 6.91e-150 | 423 |
| MS.gene98307.t1 | MTR_3g074890 | 69.799 | 298 | 76 | 4 | 19 | 316 | 21 | 304 | 2.56e-148 | 419 |
| MS.gene98307.t1 | MTR_4g094240 | 61.512 | 291 | 99 | 3 | 26 | 316 | 23 | 300 | 2.53e-127 | 365 |
| MS.gene98307.t1 | MTR_2g009070 | 54.397 | 307 | 122 | 6 | 11 | 316 | 15 | 304 | 8.34e-120 | 347 |
| MS.gene98307.t1 | MTR_1g076470 | 37.818 | 275 | 151 | 9 | 38 | 301 | 64 | 329 | 7.96e-43 | 150 |
| MS.gene98307.t1 | MTR_4g033790 | 37.993 | 279 | 152 | 9 | 38 | 305 | 65 | 333 | 2.38e-42 | 149 |
| MS.gene98307.t1 | MTR_8g071310 | 88.235 | 68 | 8 | 0 | 249 | 316 | 18 | 85 | 1.29e-35 | 124 |
| MS.gene98307.t1 | MTR_8g088900 | 74.444 | 90 | 23 | 0 | 227 | 316 | 283 | 372 | 9.97e-35 | 130 |
| MS.gene98307.t1 | MTR_4g013230 | 92.308 | 65 | 2 | 1 | 252 | 316 | 79 | 140 | 2.48e-33 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98307.t1 | AT4G08950 | 73.090 | 301 | 74 | 4 | 20 | 316 | 17 | 314 | 6.49e-157 | 441 |
| MS.gene98307.t1 | AT1G35140 | 63.226 | 310 | 106 | 4 | 8 | 315 | 5 | 308 | 2.63e-138 | 394 |
| MS.gene98307.t1 | AT5G64260 | 57.680 | 319 | 118 | 6 | 1 | 316 | 1 | 305 | 1.58e-127 | 366 |
| MS.gene98307.t1 | AT5G09440 | 57.509 | 273 | 88 | 6 | 46 | 316 | 32 | 278 | 4.66e-101 | 298 |
| MS.gene98307.t1 | AT3G02970 | 34.228 | 298 | 161 | 6 | 48 | 314 | 37 | 330 | 2.16e-49 | 167 |
| MS.gene98307.t1 | AT5G51550 | 39.024 | 287 | 154 | 9 | 38 | 313 | 55 | 331 | 8.63e-47 | 161 |
| MS.gene98307.t1 | AT2G35150 | 36.533 | 323 | 172 | 12 | 14 | 312 | 3 | 316 | 4.17e-41 | 145 |
| MS.gene98307.t1 | AT2G17230 | 35.473 | 296 | 168 | 10 | 32 | 313 | 71 | 357 | 4.41e-40 | 144 |
Find 66 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCTTGTCCTGGTGTTTA+TGG | 0.171889 | 3.1:+61193667 | MS.gene98307:CDS |
| ATCAAGAATTTGCTTGTTTA+GGG | 0.208436 | 3.1:-61193221 | None:intergenic |
| CATCAAGAATTTGCTTGTTT+AGG | 0.214856 | 3.1:-61193222 | None:intergenic |
| GTTCACCTTTGGAAGCTAAT+TGG | 0.254782 | 3.1:-61193288 | None:intergenic |
| AGATGGAATGGTGATAAATT+TGG | 0.289948 | 3.1:+61193561 | MS.gene98307:CDS |
| TTTGAGAAGAGATTGAAAAT+TGG | 0.300887 | 3.1:-61192894 | None:intergenic |
| CTTGATGAGAATTACTCATT+AGG | 0.306480 | 3.1:+61193238 | MS.gene98307:CDS |
| CCATTTCACCAACCAATTTA+CGG | 0.318307 | 3.1:+61193493 | MS.gene98307:CDS |
| TTGCAAAATTCGCTTACATT+TGG | 0.318352 | 3.1:+61193428 | MS.gene98307:CDS |
| GTGCTTTGTGGACCGTAAAT+TGG | 0.326346 | 3.1:-61193505 | None:intergenic |
| TGCAAAATTCGCTTACATTT+GGG | 0.327906 | 3.1:+61193429 | MS.gene98307:CDS |
| AAATCTCAGTCAATTTAATA+TGG | 0.337979 | 3.1:+61193032 | MS.gene98307:CDS |
| ACACGGTTCTTCTTCTTCAA+TGG | 0.340114 | 3.1:+61193387 | MS.gene98307:CDS |
| TTTGGAAATGGTTACTTTCA+AGG | 0.342445 | 3.1:+61193616 | MS.gene98307:CDS |
| TTCAATGCTCATGGTGATAA+TGG | 0.347620 | 3.1:+61193751 | MS.gene98307:CDS |
| AACAACGATGTTGGACTAGA+TGG | 0.355037 | 3.1:+61193544 | MS.gene98307:CDS |
| TTGCTTGTTGATTCTACTAC+TGG | 0.362064 | 3.1:+61193721 | MS.gene98307:CDS |
| CCGTAAATTGGTTGGTGAAA+TGG | 0.399220 | 3.1:-61193493 | None:intergenic |
| GGAATCTTTGTGTTCACCTT+TGG | 0.401182 | 3.1:-61193299 | None:intergenic |
| GGAACAGCAACAAACCCTTT+TGG | 0.401625 | 3.1:+61193598 | MS.gene98307:CDS |
| CACAACGGTCCATTACTCTA+TGG | 0.410127 | 3.1:+61193007 | MS.gene98307:CDS |
| TGAAAGTAACCATTTCCAAA+AGG | 0.429612 | 3.1:-61193613 | None:intergenic |
| GCAACCAATGGTGTGCTTTG+TGG | 0.435268 | 3.1:-61193517 | None:intergenic |
| GAAAGTAACCATTTCCAAAA+GGG | 0.440576 | 3.1:-61193612 | None:intergenic |
| GTTGAGCAAGATAATGTAGA+AGG | 0.441408 | 3.1:-61193805 | None:intergenic |
| GCTGAAACTGAAGGTTGGTT+TGG | 0.443189 | 3.1:-61193130 | None:intergenic |
| TCTAGTCCAACATCGTTGTT+TGG | 0.445960 | 3.1:-61193541 | None:intergenic |
| GAAGCTGCTTCAGCTTGTCC+TGG | 0.453010 | 3.1:+61193658 | MS.gene98307:CDS |
| AGATGTTAGTACAACGTTGA+TGG | 0.462886 | 3.1:-61193320 | None:intergenic |
| AGTTTCTAGCAGCTGAAGAA+AGG | 0.492873 | 3.1:-61192943 | None:intergenic |
| TGTCCTGGTGTTTATGGTAA+AGG | 0.498489 | 3.1:+61193673 | MS.gene98307:CDS |
| ACCATGCTGAAACTGAAGGT+TGG | 0.500598 | 3.1:-61193135 | None:intergenic |
| GGTGCTTACCCTGGTTATGC+TGG | 0.504722 | 3.1:+61193694 | MS.gene98307:CDS |
| TCTTCAATGGAATCCAGAAA+AGG | 0.511852 | 3.1:+61193400 | MS.gene98307:CDS |
| TCAGTCAATTTAATATGGTA+TGG | 0.514800 | 3.1:+61193037 | MS.gene98307:CDS |
| AGCAAATCACCAGCATAACC+AGG | 0.517128 | 3.1:-61193703 | None:intergenic |
| GTTGCACCAAACAACGATGT+TGG | 0.520520 | 3.1:+61193535 | MS.gene98307:CDS |
| CGGTCCACAAAGCACACCAT+TGG | 0.532282 | 3.1:+61193513 | MS.gene98307:CDS |
| AGTGTCCAGGTCTATGTGCT+TGG | 0.546729 | 3.1:+61193470 | MS.gene98307:CDS |
| AATGGAATCCAGAAAAGGTA+AGG | 0.547288 | 3.1:+61193405 | MS.gene98307:CDS |
| AAATTCGCTTACATTTGGGT+TGG | 0.549048 | 3.1:+61193433 | MS.gene98307:CDS |
| ATGCTCATGGTGATAATGGA+AGG | 0.567528 | 3.1:+61193755 | MS.gene98307:CDS |
| ATTATCCAATTAGCTTCCAA+AGG | 0.570977 | 3.1:+61193283 | MS.gene98307:CDS |
| TTCCACCATGCTGAAACTGA+AGG | 0.570995 | 3.1:-61193139 | None:intergenic |
| AACTCAGAAACACAGTGTCC+AGG | 0.573210 | 3.1:+61193457 | MS.gene98307:CDS |
| GTAGAAGGATCATACAAAGC+AGG | 0.575060 | 3.1:-61193790 | None:intergenic |
| GGTAATGAAGAAGCTGAGAT+TGG | 0.577764 | 3.1:-61192985 | None:intergenic |
| TATGGTAAAGGTGCTTACCC+TGG | 0.580611 | 3.1:+61193685 | MS.gene98307:CDS |
| TGAAGATGGTGAAGAAAGTG+AGG | 0.583061 | 3.1:-61193104 | None:intergenic |
| ATTGCAATGTTCTTCAAACA+AGG | 0.583966 | 3.1:-61193828 | None:intergenic |
| TTTGTGGACCGTAAATTGGT+TGG | 0.588949 | 3.1:-61193501 | None:intergenic |
| GGTGCTAGTTTCAATGCTCA+TGG | 0.589796 | 3.1:+61193742 | MS.gene98307:CDS |
| AACCTTCAGTTTCAGCATGG+TGG | 0.591696 | 3.1:+61193137 | MS.gene98307:CDS |
| TTGCAATGTTCTTCAAACAA+GGG | 0.601668 | 3.1:-61193827 | None:intergenic |
| GCTTCAAGAGGAGCTTCAGA+AGG | 0.602180 | 3.1:-61193640 | None:intergenic |
| ATGGACCGATGTGGCACACA+CGG | 0.610497 | 3.1:+61193370 | MS.gene98307:CDS |
| TCGTTGTTTGGTGCAACCAA+TGG | 0.613248 | 3.1:-61193529 | None:intergenic |
| AAGAACCGTGTGTGCCACAT+CGG | 0.625233 | 3.1:-61193375 | None:intergenic |
| CAAGCTGAAGCAGCTTCAAG+AGG | 0.626827 | 3.1:-61193652 | None:intergenic |
| ACCAACCTTCAGTTTCAGCA+TGG | 0.631067 | 3.1:+61193134 | MS.gene98307:CDS |
| CGATGTTGGACTAGATGGAA+TGG | 0.634701 | 3.1:+61193549 | MS.gene98307:CDS |
| AATGGCCAAGCACATAGACC+TGG | 0.655451 | 3.1:-61193475 | None:intergenic |
| CATAGAGTAATGGACCGTTG+TGG | 0.689245 | 3.1:-61193006 | None:intergenic |
| CAGCTTCTTCATTACCACAA+CGG | 0.692004 | 3.1:+61192992 | MS.gene98307:CDS |
| GCAAATCACCAGCATAACCA+GGG | 0.695085 | 3.1:-61193702 | None:intergenic |
| GCACCTTTACCATAAACACC+AGG | 0.705559 | 3.1:-61193676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCTCAGTCAATTTAATA+TGG | + | chr3.1:61193032-61193051 | MS.gene98307:CDS | 20.0% |
| !!! | GATAATGTTTTTGTTTGTTA+AGG | - | chr3.1:61193269-61193288 | None:intergenic | 20.0% |
| ! | TCAGTCAATTTAATATGGTA+TGG | + | chr3.1:61193037-61193056 | MS.gene98307:CDS | 25.0% |
| ! | TTTGAGAAGAGATTGAAAAT+TGG | - | chr3.1:61192897-61192916 | None:intergenic | 25.0% |
| !! | ATCAAGAATTTGCTTGTTTA+GGG | - | chr3.1:61193224-61193243 | None:intergenic | 25.0% |
| !! | TTGATTATAGCTTTTTGTGA+TGG | - | chr3.1:61193073-61193092 | None:intergenic | 25.0% |
| AGATGGAATGGTGATAAATT+TGG | + | chr3.1:61193561-61193580 | MS.gene98307:CDS | 30.0% | |
| CTTGATGAGAATTACTCATT+AGG | + | chr3.1:61193238-61193257 | MS.gene98307:CDS | 30.0% | |
| GAAAGTAACCATTTCCAAAA+GGG | - | chr3.1:61193615-61193634 | None:intergenic | 30.0% | |
| TGAAAGTAACCATTTCCAAA+AGG | - | chr3.1:61193616-61193635 | None:intergenic | 30.0% | |
| TGCAAAATTCGCTTACATTT+GGG | + | chr3.1:61193429-61193448 | MS.gene98307:CDS | 30.0% | |
| TTGCAAAATTCGCTTACATT+TGG | + | chr3.1:61193428-61193447 | MS.gene98307:CDS | 30.0% | |
| ! | ATTATCCAATTAGCTTCCAA+AGG | + | chr3.1:61193283-61193302 | MS.gene98307:CDS | 30.0% |
| ! | CATCAAGAATTTGCTTGTTT+AGG | - | chr3.1:61193225-61193244 | None:intergenic | 30.0% |
| ! | GAGATTTTACCATAGAGTAA+TGG | - | chr3.1:61193019-61193038 | None:intergenic | 30.0% |
| ! | TTCTGTAGAACGTTTTTGTA+TGG | + | chr3.1:61193351-61193370 | MS.gene98307:CDS | 30.0% |
| ! | TTTGGAAATGGTTACTTTCA+AGG | + | chr3.1:61193616-61193635 | MS.gene98307:CDS | 30.0% |
| !!! | ATTTTTTCTTTGAGGTGAGA+TGG | - | chr3.1:61193183-61193202 | None:intergenic | 30.0% |
| !!! | CTGTGTAGATTTTTTCTTTG+AGG | - | chr3.1:61193191-61193210 | None:intergenic | 30.0% |
| AAATTCGCTTACATTTGGGT+TGG | + | chr3.1:61193433-61193452 | MS.gene98307:CDS | 35.0% | |
| AATGGAATCCAGAAAAGGTA+AGG | + | chr3.1:61193405-61193424 | MS.gene98307:CDS | 35.0% | |
| AGATGTTAGTACAACGTTGA+TGG | - | chr3.1:61193323-61193342 | None:intergenic | 35.0% | |
| CCATTTCACCAACCAATTTA+CGG | + | chr3.1:61193493-61193512 | MS.gene98307:CDS | 35.0% | |
| GTTGAGCAAGATAATGTAGA+AGG | - | chr3.1:61193808-61193827 | None:intergenic | 35.0% | |
| TCTTCAATGGAATCCAGAAA+AGG | + | chr3.1:61193400-61193419 | MS.gene98307:CDS | 35.0% | |
| TTCAATGCTCATGGTGATAA+TGG | + | chr3.1:61193751-61193770 | MS.gene98307:CDS | 35.0% | |
| ! | TTTTGCAACCTTACCTTTTC+TGG | - | chr3.1:61193416-61193435 | None:intergenic | 35.0% |
| !! | GAGATGGTAGTATTTTTCAG+TGG | - | chr3.1:61193167-61193186 | None:intergenic | 35.0% |
| !! | TTGCTTGTTGATTCTACTAC+TGG | + | chr3.1:61193721-61193740 | MS.gene98307:CDS | 35.0% |
| !!! | AATTTGGCTAGTCTTTTAGC+TGG | + | chr3.1:61193577-61193596 | MS.gene98307:CDS | 35.0% |
| ACACGGTTCTTCTTCTTCAA+TGG | + | chr3.1:61193387-61193406 | MS.gene98307:CDS | 40.0% | |
| CAGCTTCTTCATTACCACAA+CGG | + | chr3.1:61192992-61193011 | MS.gene98307:CDS | 40.0% | |
| GGAATCTTTGTGTTCACCTT+TGG | - | chr3.1:61193302-61193321 | None:intergenic | 40.0% | |
| GGTAATGAAGAAGCTGAGAT+TGG | - | chr3.1:61192988-61193007 | None:intergenic | 40.0% | |
| GTAGAAGGATCATACAAAGC+AGG | - | chr3.1:61193793-61193812 | None:intergenic | 40.0% | |
| TCTAGTCCAACATCGTTGTT+TGG | - | chr3.1:61193544-61193563 | None:intergenic | 40.0% | |
| TGAAGATGGTGAAGAAAGTG+AGG | - | chr3.1:61193107-61193126 | None:intergenic | 40.0% | |
| TGTCCTGGTGTTTATGGTAA+AGG | + | chr3.1:61193673-61193692 | MS.gene98307:CDS | 40.0% | |
| TTTGTGGACCGTAAATTGGT+TGG | - | chr3.1:61193504-61193523 | None:intergenic | 40.0% | |
| ! | AACAACGATGTTGGACTAGA+TGG | + | chr3.1:61193544-61193563 | MS.gene98307:CDS | 40.0% |
| ! | GTTCACCTTTGGAAGCTAAT+TGG | - | chr3.1:61193291-61193310 | None:intergenic | 40.0% |
| !! | AGTTTCTAGCAGCTGAAGAA+AGG | - | chr3.1:61192946-61192965 | None:intergenic | 40.0% |
| !! | ATGCTCATGGTGATAATGGA+AGG | + | chr3.1:61193755-61193774 | MS.gene98307:CDS | 40.0% |
| !! | CCGTAAATTGGTTGGTGAAA+TGG | - | chr3.1:61193496-61193515 | None:intergenic | 40.0% |
| !! | GCAACAAACCCTTTTGGAAA+TGG | + | chr3.1:61193604-61193623 | MS.gene98307:CDS | 40.0% |
| !!! | GGTTGGTTTGGTTTTGAAGA+TGG | - | chr3.1:61193121-61193140 | None:intergenic | 40.0% |
| AACCTTCAGTTTCAGCATGG+TGG | + | chr3.1:61193137-61193156 | MS.gene98307:CDS | 45.0% | |
| AACTCAGAAACACAGTGTCC+AGG | + | chr3.1:61193457-61193476 | MS.gene98307:CDS | 45.0% | |
| ACCAACCTTCAGTTTCAGCA+TGG | + | chr3.1:61193134-61193153 | MS.gene98307:CDS | 45.0% | |
| ACCATGCTGAAACTGAAGGT+TGG | - | chr3.1:61193138-61193157 | None:intergenic | 45.0% | |
| AGCAAATCACCAGCATAACC+AGG | - | chr3.1:61193706-61193725 | None:intergenic | 45.0% | |
| CACAACGGTCCATTACTCTA+TGG | + | chr3.1:61193007-61193026 | MS.gene98307:CDS | 45.0% | |
| GCAAATCACCAGCATAACCA+GGG | - | chr3.1:61193705-61193724 | None:intergenic | 45.0% | |
| GCACCTTTACCATAAACACC+AGG | - | chr3.1:61193679-61193698 | None:intergenic | 45.0% | |
| GTGCTTTGTGGACCGTAAAT+TGG | - | chr3.1:61193508-61193527 | None:intergenic | 45.0% | |
| GTTGCACCAAACAACGATGT+TGG | + | chr3.1:61193535-61193554 | MS.gene98307:CDS | 45.0% | |
| TCAGCTTGTCCTGGTGTTTA+TGG | + | chr3.1:61193667-61193686 | MS.gene98307:CDS | 45.0% | |
| TTCCACCATGCTGAAACTGA+AGG | - | chr3.1:61193142-61193161 | None:intergenic | 45.0% | |
| ! | CGATGTTGGACTAGATGGAA+TGG | + | chr3.1:61193549-61193568 | MS.gene98307:CDS | 45.0% |
| ! | CGTTTTTGTATGGACCGATG+TGG | + | chr3.1:61193361-61193380 | MS.gene98307:CDS | 45.0% |
| ! | GCTGAAACTGAAGGTTGGTT+TGG | - | chr3.1:61193133-61193152 | None:intergenic | 45.0% |
| ! | GGAACAGCAACAAACCCTTT+TGG | + | chr3.1:61193598-61193617 | MS.gene98307:CDS | 45.0% |
| ! | GGTGCTAGTTTCAATGCTCA+TGG | + | chr3.1:61193742-61193761 | MS.gene98307:CDS | 45.0% |
| !! | CATAGAGTAATGGACCGTTG+TGG | - | chr3.1:61193009-61193028 | None:intergenic | 45.0% |
| !! | TATGGTAAAGGTGCTTACCC+TGG | + | chr3.1:61193685-61193704 | MS.gene98307:CDS | 45.0% |
| !! | TCGTTGTTTGGTGCAACCAA+TGG | - | chr3.1:61193532-61193551 | None:intergenic | 45.0% |
| AAGAACCGTGTGTGCCACAT+CGG | - | chr3.1:61193378-61193397 | None:intergenic | 50.0% | |
| AATGGCCAAGCACATAGACC+TGG | - | chr3.1:61193478-61193497 | None:intergenic | 50.0% | |
| AGTGTCCAGGTCTATGTGCT+TGG | + | chr3.1:61193470-61193489 | MS.gene98307:CDS | 50.0% | |
| CAAGCTGAAGCAGCTTCAAG+AGG | - | chr3.1:61193655-61193674 | None:intergenic | 50.0% | |
| GCAACCAATGGTGTGCTTTG+TGG | - | chr3.1:61193520-61193539 | None:intergenic | 50.0% | |
| GCTTCAAGAGGAGCTTCAGA+AGG | - | chr3.1:61193643-61193662 | None:intergenic | 50.0% | |
| ATGGACCGATGTGGCACACA+CGG | + | chr3.1:61193370-61193389 | MS.gene98307:CDS | 55.0% | |
| CGGTCCACAAAGCACACCAT+TGG | + | chr3.1:61193513-61193532 | MS.gene98307:CDS | 55.0% | |
| GAAGCTGCTTCAGCTTGTCC+TGG | + | chr3.1:61193658-61193677 | MS.gene98307:CDS | 55.0% | |
| GGTGCTTACCCTGGTTATGC+TGG | + | chr3.1:61193694-61193713 | MS.gene98307:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 61192887 | 61193837 | 61192887 | ID=MS.gene98307 |
| chr3.1 | mRNA | 61192887 | 61193837 | 61192887 | ID=MS.gene98307.t1;Parent=MS.gene98307 |
| chr3.1 | exon | 61192887 | 61193837 | 61192887 | ID=MS.gene98307.t1.exon1;Parent=MS.gene98307.t1 |
| chr3.1 | CDS | 61192887 | 61193837 | 61192887 | ID=cds.MS.gene98307.t1;Parent=MS.gene98307.t1 |
| Gene Sequence |
| Protein sequence |
