Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98370.t1 | RHN51172.1 | 96.6 | 328 | 10 | 1 | 1 | 327 | 1 | 328 | 3.00E-175 | 624.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98370.t1 | Q84V25 | 72.0 | 318 | 89 | 0 | 10 | 327 | 5 | 322 | 7.8e-132 | 471.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98370.t1 | A0A396HCY0 | 96.6 | 328 | 10 | 1 | 1 | 327 | 1 | 328 | 2.2e-175 | 624.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057548 | MS.gene98370 | 0.809878 | 1.52E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene98370 | 0.809401 | 1.93E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98370.t1 | MTR_7g034395 | 72.756 | 312 | 85 | 0 | 16 | 327 | 6 | 317 | 3.69e-150 | 424 |
| MS.gene98370.t1 | MTR_6g012170 | 68.139 | 317 | 101 | 0 | 11 | 327 | 4 | 320 | 3.09e-146 | 415 |
| MS.gene98370.t1 | MTR_8g064610 | 61.280 | 328 | 125 | 2 | 1 | 327 | 58 | 384 | 1.13e-144 | 413 |
| MS.gene98370.t1 | MTR_6g012160 | 67.698 | 291 | 94 | 0 | 11 | 301 | 4 | 294 | 6.38e-132 | 378 |
| MS.gene98370.t1 | MTR_8g035630 | 46.154 | 312 | 160 | 6 | 19 | 327 | 5 | 311 | 1.15e-82 | 254 |
| MS.gene98370.t1 | MTR_8g035880 | 46.429 | 308 | 157 | 6 | 19 | 323 | 5 | 307 | 7.00e-82 | 252 |
| MS.gene98370.t1 | MTR_1319s0010 | 99.074 | 108 | 1 | 0 | 79 | 186 | 2 | 109 | 7.65e-69 | 210 |
| MS.gene98370.t1 | MTR_6g012140 | 62.411 | 141 | 53 | 0 | 186 | 326 | 3 | 143 | 5.12e-61 | 191 |
| MS.gene98370.t1 | MTR_6g039950 | 92.500 | 80 | 5 | 1 | 1 | 79 | 1 | 80 | 3.49e-48 | 156 |
| MS.gene98370.t1 | MTR_4g033205 | 31.861 | 317 | 179 | 8 | 36 | 325 | 23 | 329 | 2.61e-34 | 128 |
| MS.gene98370.t1 | MTR_4g032995 | 31.861 | 317 | 179 | 8 | 36 | 325 | 23 | 329 | 2.69e-34 | 128 |
| MS.gene98370.t1 | MTR_4g036310 | 30.769 | 312 | 175 | 9 | 41 | 323 | 28 | 327 | 3.94e-31 | 119 |
| MS.gene98370.t1 | MTR_7g055743 | 31.715 | 309 | 174 | 10 | 41 | 322 | 68 | 366 | 3.11e-30 | 118 |
| MS.gene98370.t1 | MTR_2g078520 | 30.814 | 344 | 189 | 11 | 18 | 323 | 26 | 358 | 1.60e-28 | 113 |
| MS.gene98370.t1 | MTR_4g036260 | 31.408 | 277 | 151 | 7 | 75 | 325 | 45 | 308 | 4.54e-26 | 105 |
| MS.gene98370.t1 | MTR_2g012420 | 27.353 | 340 | 194 | 12 | 19 | 323 | 2 | 323 | 3.21e-25 | 103 |
| MS.gene98370.t1 | MTR_6g012100 | 64.516 | 62 | 22 | 0 | 266 | 327 | 8 | 69 | 8.71e-24 | 92.8 |
| MS.gene98370.t1 | MTR_4g086400 | 26.852 | 324 | 184 | 9 | 44 | 327 | 314 | 624 | 2.55e-23 | 100 |
| MS.gene98370.t1 | MTR_4g086400 | 26.852 | 324 | 184 | 9 | 44 | 327 | 174 | 484 | 2.71e-23 | 100 |
| MS.gene98370.t1 | MTR_4g050760 | 27.414 | 321 | 174 | 13 | 42 | 323 | 23 | 323 | 1.70e-22 | 96.3 |
| MS.gene98370.t1 | MTR_2g012380 | 27.414 | 321 | 174 | 13 | 42 | 323 | 23 | 323 | 1.70e-22 | 96.3 |
| MS.gene98370.t1 | MTR_4g086410 | 26.543 | 324 | 185 | 9 | 44 | 327 | 314 | 624 | 3.21e-22 | 97.8 |
| MS.gene98370.t1 | MTR_2g012380 | 30.435 | 230 | 132 | 8 | 42 | 258 | 23 | 237 | 7.51e-21 | 90.9 |
| MS.gene98370.t1 | MTR_3g093620 | 31.559 | 263 | 144 | 9 | 9 | 258 | 11 | 250 | 1.96e-19 | 87.8 |
| MS.gene98370.t1 | MTR_4g036170 | 30.769 | 286 | 150 | 11 | 66 | 323 | 37 | 302 | 1.56e-17 | 82.0 |
| MS.gene98370.t1 | MTR_2g095840 | 28.125 | 256 | 154 | 10 | 18 | 257 | 40 | 281 | 9.78e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98370.t1 | AT1G23740 | 61.905 | 315 | 119 | 1 | 13 | 327 | 73 | 386 | 2.69e-138 | 397 |
| MS.gene98370.t1 | AT4G13010 | 30.094 | 319 | 182 | 8 | 36 | 325 | 23 | 329 | 2.33e-30 | 117 |
| MS.gene98370.t1 | AT3G15090 | 33.992 | 253 | 151 | 9 | 13 | 258 | 27 | 270 | 4.80e-27 | 109 |
| MS.gene98370.t1 | AT4G21580 | 27.647 | 340 | 193 | 12 | 19 | 323 | 2 | 323 | 1.13e-25 | 105 |
| MS.gene98370.t1 | AT3G56460 | 33.840 | 263 | 139 | 9 | 9 | 258 | 11 | 251 | 5.18e-25 | 103 |
| MS.gene98370.t1 | AT4G21580 | 27.353 | 340 | 188 | 13 | 19 | 323 | 2 | 317 | 8.51e-24 | 99.8 |
| MS.gene98370.t1 | AT1G49670 | 28.481 | 316 | 177 | 10 | 48 | 327 | 318 | 620 | 7.68e-23 | 99.8 |
| MS.gene98370.t1 | AT4G21580 | 25.547 | 274 | 160 | 8 | 82 | 323 | 29 | 290 | 5.74e-16 | 77.4 |
Find 77 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTGGAAGCTTTGCTATTC+AGG | 0.194050 | 6.3:+34239805 | MS.gene98370:CDS |
| CAGCTTGCCAAACATGTTTA+TGG | 0.207808 | 6.3:+34241056 | MS.gene98370:intron |
| TCTTGTAATCAACAGGATTA+AGG | 0.247743 | 6.3:-34238229 | None:intergenic |
| GAAAATGGTATAGGAGTCTT+TGG | 0.294818 | 6.3:-34241937 | None:intergenic |
| ACAAAGTGCCAAGAATCTTT+AGG | 0.297216 | 6.3:-34239616 | None:intergenic |
| AATAGCTGAAGAGAGATTAT+TGG | 0.302420 | 6.3:+34239649 | MS.gene98370:CDS |
| CTTTCAAACCTAAAGATTCT+TGG | 0.317314 | 6.3:+34239608 | MS.gene98370:CDS |
| GCTTCAATGACCTCTGAAAA+TGG | 0.319672 | 6.3:-34241952 | None:intergenic |
| TTCTAAAGTTACATCCAAAT+TGG | 0.322662 | 6.3:+34238153 | MS.gene98370:CDS |
| AGTTGAGGTATGGACCAATT+TGG | 0.333043 | 6.3:-34238167 | None:intergenic |
| AAGTGAAGTGGTGAAATTTA+AGG | 0.335007 | 6.3:+34239547 | MS.gene98370:CDS |
| TTCTCCTTTGTATAATCAAT+TGG | 0.357485 | 6.3:-34241149 | None:intergenic |
| GTACCAGGCTTTGATGTTGC+TGG | 0.358510 | 6.3:+34239506 | MS.gene98370:CDS |
| GTGATGTAGGGGAAGTTGAT+AGG | 0.368988 | 6.3:+34241761 | MS.gene98370:intron |
| CTTGTAATCAACAGGATTAA+GGG | 0.375473 | 6.3:-34238228 | None:intergenic |
| TTCTTTGTGCTCACTTCTAA+AGG | 0.381735 | 6.3:+34241853 | MS.gene98370:CDS |
| ATCCTTGTCTTGGGAGGTGC+TGG | 0.386559 | 6.3:+34239779 | MS.gene98370:CDS |
| TTGGGAGGTGCTGGTGGAGT+TGG | 0.387165 | 6.3:+34239788 | MS.gene98370:CDS |
| AATTGACCACTTTCAAAGTA+AGG | 0.398467 | 6.3:-34241898 | None:intergenic |
| TGCATCCTCTTGTAATCAAC+AGG | 0.411281 | 6.3:-34238236 | None:intergenic |
| GTCATCTTTGAGTTGAGGTA+TGG | 0.412969 | 6.3:-34238177 | None:intergenic |
| AGATGCACCATAAACATGTT+TGG | 0.415334 | 6.3:-34241063 | None:intergenic |
| AAGGTTGGAGATGAAATATA+TGG | 0.416415 | 6.3:+34239566 | MS.gene98370:CDS |
| TGGCAAATCTATCCTTGTCT+TGG | 0.426090 | 6.3:+34239769 | MS.gene98370:CDS |
| AGGGTCAGTGTCCTTGAATA+AGG | 0.428200 | 6.3:-34238261 | None:intergenic |
| AACCTATGATTTCAAGGAAT+GGG | 0.437680 | 6.3:-34242024 | None:intergenic |
| TGTAACTTTAGAATATCTAA+TGG | 0.437701 | 6.3:-34238143 | None:intergenic |
| ATGACCTCTGAAAATGGTAT+AGG | 0.438972 | 6.3:-34241946 | None:intergenic |
| GGCAAATCTATCCTTGTCTT+GGG | 0.446782 | 6.3:+34239770 | MS.gene98370:CDS |
| TGATGTAGGGGAAGTTGATA+GGG | 0.461956 | 6.3:+34241762 | MS.gene98370:intron |
| AAAATAGCCGGTGGAAATCC+AGG | 0.464363 | 6.3:-34241832 | None:intergenic |
| TTAAGACCTTACTTTGAAAG+TGG | 0.474636 | 6.3:+34241892 | MS.gene98370:CDS |
| TGAGTTGGAATAGTAATAGT+TGG | 0.480302 | 6.3:-34238086 | None:intergenic |
| AAACCTATGATTTCAAGGAA+TGG | 0.493795 | 6.3:-34242025 | None:intergenic |
| GGAGTCTTTGGGTCAAGCAT+TGG | 0.495988 | 6.3:-34241925 | None:intergenic |
| GAGGATGCATGCCTTATTCA+AGG | 0.499881 | 6.3:+34238250 | MS.gene98370:CDS |
| TTCCAACTCATACAAAAGCT+TGG | 0.500152 | 6.3:+34238099 | MS.gene98370:CDS |
| GAGAGAGCTGAGCTTTCTGC+TGG | 0.500936 | 6.3:+34239749 | MS.gene98370:CDS |
| CAACAACCTTGATGAGGACT+TGG | 0.502267 | 6.3:-34238199 | None:intergenic |
| GGAAGTTGATAGGGCTATGA+AGG | 0.506979 | 6.3:+34241771 | MS.gene98370:CDS |
| CTTGTCTTGGGAGGTGCTGG+TGG | 0.513724 | 6.3:+34239782 | MS.gene98370:CDS |
| TGCTAGCATTCCTTTAGCTA+TGG | 0.523185 | 6.3:+34239706 | MS.gene98370:CDS |
| TAAGCTGTCTCCATAGCTAA+AGG | 0.523414 | 6.3:-34239716 | None:intergenic |
| TTAATCCTGTTGATTACAAG+AGG | 0.525834 | 6.3:+34238231 | MS.gene98370:CDS |
| ACTTGGTCATCTTTGAGTTG+AGG | 0.531211 | 6.3:-34238182 | None:intergenic |
| AAAATGGTATAGGAGTCTTT+GGG | 0.531891 | 6.3:-34241936 | None:intergenic |
| ATAGCAGCAACTTCTAGCAC+TGG | 0.532864 | 6.3:+34241089 | MS.gene98370:CDS |
| AAGTTTGATGTGGTGTATGA+TGG | 0.532868 | 6.3:+34241191 | MS.gene98370:CDS |
| GCTATGGAGACAGCTTATGA+AGG | 0.536850 | 6.3:+34239722 | MS.gene98370:CDS |
| GAAGTGGTGAAATTTAAGGT+TGG | 0.542994 | 6.3:+34239551 | MS.gene98370:CDS |
| GTTGTGACAATAGTACCTCC+TGG | 0.547377 | 6.3:+34241814 | MS.gene98370:CDS |
| TTCAAGAGCTACCGGAAAAG+TGG | 0.549811 | 6.3:+34241993 | MS.gene98370:CDS |
| TTAGAGACTTCAAGAGCTAC+CGG | 0.550921 | 6.3:+34241985 | MS.gene98370:CDS |
| TGCTGGCATAGTAATTAAAG+TGG | 0.567681 | 6.3:+34239523 | MS.gene98370:CDS |
| GTGAGCACAAAGAAAATAGC+CGG | 0.573204 | 6.3:-34241844 | None:intergenic |
| CTTGCCAATTGATTATACAA+AGG | 0.579434 | 6.3:+34241145 | MS.gene98370:CDS |
| AATTAACATACAGGTAGATG+AGG | 0.583060 | 6.3:-34238281 | None:intergenic |
| GCTATGAAGGCAATTAATGA+AGG | 0.583363 | 6.3:+34241784 | MS.gene98370:CDS |
| AAATCTATCCTTGTCTTGGG+AGG | 0.587774 | 6.3:+34239773 | MS.gene98370:CDS |
| CACCAGCACCTCCCAAGACA+AGG | 0.592723 | 6.3:-34239781 | None:intergenic |
| GCTTGGTTCTACTCTGAACA+TGG | 0.593786 | 6.3:+34238116 | MS.gene98370:CDS |
| AGCTCTTGAAGTCTCTAAGT+AGG | 0.594905 | 6.3:-34241980 | None:intergenic |
| TTGTGTGAGAAGATTGTACC+AGG | 0.597513 | 6.3:+34239491 | MS.gene98370:intron |
| ATGCCAGCAACATCAAAGCC+TGG | 0.598693 | 6.3:-34239509 | None:intergenic |
| AATTAAAGTGGGAAGTGAAG+TGG | 0.601756 | 6.3:+34239535 | MS.gene98370:CDS |
| TATGGTGACATCAATGAGGA+AGG | 0.611730 | 6.3:+34239584 | MS.gene98370:CDS |
| AGTACCTCCTGGATTTCCAC+CGG | 0.613202 | 6.3:+34241825 | MS.gene98370:CDS |
| AGATGACCAAGTCCTCATCA+AGG | 0.619767 | 6.3:+34238193 | MS.gene98370:CDS |
| ATGAAGGCAATTAATGAAGG+TGG | 0.620055 | 6.3:+34241787 | MS.gene98370:CDS |
| GATGTGGTGTATGATGGAGT+AGG | 0.631572 | 6.3:+34241197 | MS.gene98370:CDS |
| GCTGGCATAGTAATTAAAGT+GGG | 0.631964 | 6.3:+34239524 | MS.gene98370:CDS |
| ATTAACATACAGGTAGATGA+GGG | 0.642751 | 6.3:-34238280 | None:intergenic |
| TCTCCCAGAAAAGTTTGATG+TGG | 0.643843 | 6.3:+34241181 | MS.gene98370:CDS |
| AGCACAAAGAAAATAGCCGG+TGG | 0.673783 | 6.3:-34241841 | None:intergenic |
| AAGCAGCAACAACCTTGATG+AGG | 0.675221 | 6.3:-34238205 | None:intergenic |
| AATATATGGTGACATCAATG+AGG | 0.688125 | 6.3:+34239580 | MS.gene98370:CDS |
| ATAGCCGGTGGAAATCCAGG+AGG | 0.788826 | 6.3:-34241829 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAAAAAAATTAAA+AGG | - | chr6.3:34240537-34240556 | None:intergenic | 0.0% |
| !! | ATAAATAAAAAAAATTAAAA+GGG | - | chr6.3:34240536-34240555 | None:intergenic | 0.0% |
| !!! | AATTTTTTTTATTTATTTAA+GGG | + | chr6.3:34240540-34240559 | MS.gene98370:intron | 0.0% |
| !!! | TAATTTTTTTTATTTATTTA+AGG | + | chr6.3:34240539-34240558 | MS.gene98370:intron | 0.0% |
| !! | AAAAAATATATTTACATGTT+CGG | + | chr6.3:34241030-34241049 | MS.gene98370:intron | 10.0% |
| !! | AAATTAATAAAAAAATTGTG+AGG | + | chr6.3:34239045-34239064 | MS.gene98370:intron | 10.0% |
| !!! | AGTGTTATTTTTATATATAA+TGG | - | chr6.3:34239392-34239411 | None:intergenic | 10.0% |
| !!! | CTTTTTCTTATATTTTATTA+CGG | + | chr6.3:34239935-34239954 | MS.gene98370:intron | 10.0% |
| !!! | TTTTTTTTATTTATTTAAGG+GGG | + | chr6.3:34240542-34240561 | MS.gene98370:intron | 10.0% |
| !! | AATATTACATAGACTAAAAT+AGG | - | chr6.3:34240695-34240714 | None:intergenic | 15.0% |
| !! | ATATGTATGTACAAATAAAT+AGG | - | chr6.3:34241228-34241247 | None:intergenic | 15.0% |
| !! | ATATTACATAGACTAAAATA+GGG | - | chr6.3:34240694-34240713 | None:intergenic | 15.0% |
| !! | ATTATATGAATCAAGTATTA+GGG | + | chr6.3:34240872-34240891 | MS.gene98370:intron | 15.0% |
| !! | GTAATAGGTATTAAAAAATT+GGG | + | chr6.3:34240950-34240969 | MS.gene98370:intron | 15.0% |
| !! | TAATAGGTATTAAAAAATTG+GGG | + | chr6.3:34240951-34240970 | MS.gene98370:intron | 15.0% |
| !! | TATTATATGAATCAAGTATT+AGG | + | chr6.3:34240871-34240890 | MS.gene98370:intron | 15.0% |
| !! | TGTAATAGGTATTAAAAAAT+TGG | + | chr6.3:34240949-34240968 | MS.gene98370:intron | 15.0% |
| !! | TTAACAAATCTTACAAAATT+AGG | + | chr6.3:34240568-34240587 | MS.gene98370:intron | 15.0% |
| !! | TTCAAAAAAAAAAAACATCA+AGG | + | chr6.3:34239300-34239319 | MS.gene98370:intron | 15.0% |
| !! | TTTATAAAAATTGAACATCA+AGG | + | chr6.3:34239266-34239285 | MS.gene98370:intron | 15.0% |
| !!! | AAAATTGACTTTTTGTAAAA+GGG | - | chr6.3:34240427-34240446 | None:intergenic | 15.0% |
| !!! | ACTTTCTTTTTTTTATGAAT+CGG | - | chr6.3:34239167-34239186 | None:intergenic | 15.0% |
| !!! | ACTTTTTATAAATTGTGTTT+AGG | - | chr6.3:34238465-34238484 | None:intergenic | 15.0% |
| !!! | ATATGGATAATTTTTATAAG+TGG | - | chr6.3:34241585-34241604 | None:intergenic | 15.0% |
| !!! | ATGAATGTTTTTTAAGAAAA+TGG | - | chr6.3:34239448-34239467 | None:intergenic | 15.0% |
| !!! | TGATGTTTTTTTTTTTTGAA+GGG | - | chr6.3:34239300-34239319 | None:intergenic | 15.0% |
| !!! | TTGATGTTTTTTTTTTTTGA+AGG | - | chr6.3:34239301-34239320 | None:intergenic | 15.0% |
| !!! | TTTATATATAATGGTTCTAA+AGG | - | chr6.3:34239383-34239402 | None:intergenic | 15.0% |
| !! | AAAAACAAAATCTCATACAA+GGG | - | chr6.3:34238519-34238538 | None:intergenic | 20.0% |
| !! | AAGATAGAGAAAAGAAAATA+TGG | - | chr6.3:34241602-34241621 | None:intergenic | 20.0% |
| !! | ACACAACAAAATAATTCATA+AGG | - | chr6.3:34239477-34239496 | None:intergenic | 20.0% |
| !! | ATCAATAAATATCTACTATC+AGG | + | chr6.3:34241500-34241519 | MS.gene98370:intron | 20.0% |
| !! | ATTAATTCTTCAAACTTGAT+AGG | - | chr6.3:34239120-34239139 | None:intergenic | 20.0% |
| !! | GTTATTAAAAAATGATGAGA+TGG | - | chr6.3:34240512-34240531 | None:intergenic | 20.0% |
| !! | TAAAAACAAAATCTCATACA+AGG | - | chr6.3:34238520-34238539 | None:intergenic | 20.0% |
| !! | TAAAGAGAAAATTAACATAC+AGG | - | chr6.3:34238293-34238312 | None:intergenic | 20.0% |
| !! | TAACAAGAATCAATTGTAAT+AGG | + | chr6.3:34240935-34240954 | MS.gene98370:intron | 20.0% |
| !! | TAATATGCATAATATATGCA+AGG | + | chr6.3:34240776-34240795 | MS.gene98370:intron | 20.0% |
| !! | TTATATGAATCAAGTATTAG+GGG | + | chr6.3:34240873-34240892 | MS.gene98370:intron | 20.0% |
| !! | TTATTCAATGAACCTAAAAA+AGG | - | chr6.3:34238879-34238898 | None:intergenic | 20.0% |
| !!! | AATATTTTTGATTTAATGCG+TGG | + | chr6.3:34240027-34240046 | MS.gene98370:intron | 20.0% |
| !!! | AATTTAGTTTTCTACATTGT+TGG | + | chr6.3:34241640-34241659 | MS.gene98370:intron | 20.0% |
| !!! | ATATTTCTAGAAGTTAGTTA+AGG | - | chr6.3:34240153-34240172 | None:intergenic | 20.0% |
| !!! | CAAAATTGACTTTTTGTAAA+AGG | - | chr6.3:34240428-34240447 | None:intergenic | 20.0% |
| !!! | TAAGAAAAGATTCCTTTTTT+AGG | + | chr6.3:34238864-34238883 | MS.gene98370:intron | 20.0% |
| !!! | TAAGAAAAGATTCCTTTTTT+AGG | - | chr6.3:34238883-34238864 | None:intergenic | 20.0% |
| !!! | TGTAACTTTAGAATATCTAA+TGG | - | chr6.3:34238146-34238165 | None:intergenic | 20.0% |
| !!! | TTTAATGTATTTTAGTGTGT+AGG | - | chr6.3:34238590-34238609 | None:intergenic | 20.0% |
| !!! | TTTTAAGTATTAATCCACAA+TGG | + | chr6.3:34241558-34241577 | MS.gene98370:intron | 20.0% |
| !!! | TTTTTTAAGAAAATGGAAAG+AGG | - | chr6.3:34239441-34239460 | None:intergenic | 20.0% |
| ! | AATTATTAATACCTCTCTTG+AGG | + | chr6.3:34239070-34239089 | MS.gene98370:intron | 25.0% |
| ! | AATTTGGCATTATAATCTCA+AGG | + | chr6.3:34239341-34239360 | MS.gene98370:intron | 25.0% |
| ! | ACAAATCTTACAAAATTAGG+AGG | + | chr6.3:34240571-34240590 | MS.gene98370:intron | 25.0% |
| ! | ACACATTATAGGTAGAAAAA+GGG | + | chr6.3:34238678-34238697 | MS.gene98370:intron | 25.0% |
| ! | ACATGTAGCTCATATAAAAA+CGG | - | chr6.3:34241412-34241431 | None:intergenic | 25.0% |
| ! | ATTATTAATACCTCTCTTGA+GGG | + | chr6.3:34239071-34239090 | MS.gene98370:intron | 25.0% |
| ! | GAGTACAATAATAGAATCTA+GGG | - | chr6.3:34240303-34240322 | None:intergenic | 25.0% |
| ! | TAAAAAAAACTCAGCTCTTA+TGG | - | chr6.3:34238733-34238752 | None:intergenic | 25.0% |
| ! | TAACAACTCATGTTAGTATT+TGG | + | chr6.3:34238368-34238387 | MS.gene98370:intron | 25.0% |
| ! | TAAGAAAATTCAGCTTACTT+TGG | + | chr6.3:34238425-34238444 | MS.gene98370:intron | 25.0% |
| ! | TACACATTATAGGTAGAAAA+AGG | + | chr6.3:34238677-34238696 | MS.gene98370:intron | 25.0% |
| ! | TCAATTAAGTGATGAGAATT+TGG | + | chr6.3:34239325-34239344 | MS.gene98370:intron | 25.0% |
| ! | TGAGTACAATAATAGAATCT+AGG | - | chr6.3:34240304-34240323 | None:intergenic | 25.0% |
| ! | TTAGTCATCTTCATATGATA+TGG | - | chr6.3:34240835-34240854 | None:intergenic | 25.0% |
| ! | TTCTCCTTTGTATAATCAAT+TGG | - | chr6.3:34241152-34241171 | None:intergenic | 25.0% |
| !! | CTTCATATGATATGGAATTT+TGG | - | chr6.3:34240827-34240846 | None:intergenic | 25.0% |
| !! | GACCATCAATATATTTCTAA+GGG | + | chr6.3:34240049-34240068 | MS.gene98370:intron | 25.0% |
| !! | GTAAGCTGAATTTTCTTAAT+AGG | - | chr6.3:34238423-34238442 | None:intergenic | 25.0% |
| !! | TAAGAAAAAGTACATGTATC+TGG | - | chr6.3:34239925-34239944 | None:intergenic | 25.0% |
| !! | TTCTAGAAATATCTAGAACT+GGG | + | chr6.3:34240161-34240180 | MS.gene98370:intron | 25.0% |
| !!! | AAAACCGTTATTTAATTTGC+AGG | - | chr6.3:34240388-34240407 | None:intergenic | 25.0% |
| !!! | AAACCGTTATTTAATTTGCA+GGG | - | chr6.3:34240387-34240406 | None:intergenic | 25.0% |
| !!! | CTGAGTTTTTTTTATACACT+AGG | + | chr6.3:34238739-34238758 | MS.gene98370:intron | 25.0% |
| !!! | CTTTAACTTGTAAAGTTAGA+AGG | - | chr6.3:34240350-34240369 | None:intergenic | 25.0% |
| !!! | TCAATGAAGCTTAGATTTTT+TGG | - | chr6.3:34239683-34239702 | None:intergenic | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr6.3:34238963-34238982 | MS.gene98370:intron | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | - | chr6.3:34238982-34238963 | None:intergenic | 25.0% |
| !!! | TTCTAAAGTTACATCCAAAT+TGG | + | chr6.3:34238153-34238172 | MS.gene98370:CDS | 25.0% |
| AAAATGGTATAGGAGTCTTT+GGG | - | chr6.3:34241939-34241958 | None:intergenic | 30.0% | |
| AAACTTGATAGGACCTATAT+GGG | - | chr6.3:34239109-34239128 | None:intergenic | 30.0% | |
| AAGATCTTAGCTTAGTTAGT+AGG | + | chr6.3:34238649-34238668 | MS.gene98370:intron | 30.0% | |
| AAGGTTGGAGATGAAATATA+TGG | + | chr6.3:34239566-34239585 | MS.gene98370:CDS | 30.0% | |
| AAGTGAAGTGGTGAAATTTA+AGG | + | chr6.3:34239547-34239566 | MS.gene98370:CDS | 30.0% | |
| AATAGCTGAAGAGAGATTAT+TGG | + | chr6.3:34239649-34239668 | MS.gene98370:CDS | 30.0% | |
| AATATATGGTGACATCAATG+AGG | + | chr6.3:34239580-34239599 | MS.gene98370:CDS | 30.0% | |
| AATTAACATACAGGTAGATG+AGG | - | chr6.3:34238284-34238303 | None:intergenic | 30.0% | |
| AATTGACCACTTTCAAAGTA+AGG | - | chr6.3:34241901-34241920 | None:intergenic | 30.0% | |
| ACATCACATAGTATCAAAGA+TGG | - | chr6.3:34241748-34241767 | None:intergenic | 30.0% | |
| ACTAACTAAGCTAAGATCTT+GGG | - | chr6.3:34238649-34238668 | None:intergenic | 30.0% | |
| AGATCTTAGCTTAGTTAGTA+GGG | + | chr6.3:34238650-34238669 | MS.gene98370:intron | 30.0% | |
| ATTAACATACAGGTAGATGA+GGG | - | chr6.3:34238283-34238302 | None:intergenic | 30.0% | |
| CACATTATAGGTAGAAAAAG+GGG | + | chr6.3:34238679-34238698 | MS.gene98370:intron | 30.0% | |
| CTACTCAATGTACCTAAAAA+AGG | + | chr6.3:34238938-34238957 | MS.gene98370:intron | 30.0% | |
| CTGAAAATTAGCATACATTG+AGG | + | chr6.3:34241003-34241022 | MS.gene98370:intron | 30.0% | |
| CTTGCCAATTGATTATACAA+AGG | + | chr6.3:34241145-34241164 | MS.gene98370:CDS | 30.0% | |
| CTTGTAATCAACAGGATTAA+GGG | - | chr6.3:34238231-34238250 | None:intergenic | 30.0% | |
| CTTTCAAACCTAAAGATTCT+TGG | + | chr6.3:34239608-34239627 | MS.gene98370:CDS | 30.0% | |
| CTTTGATACTATGTGATGTA+GGG | + | chr6.3:34241749-34241768 | MS.gene98370:intron | 30.0% | |
| GAATCTCAACATACTCTTTA+AGG | - | chr6.3:34239013-34239032 | None:intergenic | 30.0% | |
| GATCCCTGCAAATTAAATAA+CGG | + | chr6.3:34240381-34240400 | MS.gene98370:intron | 30.0% | |
| GTGAATCGTAAATATGAGAA+GGG | - | chr6.3:34241371-34241390 | None:intergenic | 30.0% | |
| TAAAAAATTGGGGAGTGAAA+AGG | + | chr6.3:34240961-34240980 | MS.gene98370:intron | 30.0% | |
| TACCTATTAACAATTTCCTG+CGG | + | chr6.3:34239853-34239872 | MS.gene98370:intron | 30.0% | |
| TACTAACTAAGCTAAGATCT+TGG | - | chr6.3:34238650-34238669 | None:intergenic | 30.0% | |
| TCAAAAAAAAATACTCCCTC+CGG | - | chr6.3:34238985-34239004 | None:intergenic | 30.0% | |
| TCTCATATTTACGATTCACA+CGG | + | chr6.3:34241372-34241391 | MS.gene98370:intron | 30.0% | |
| TCTTGTAATCAACAGGATTA+AGG | - | chr6.3:34238232-34238251 | None:intergenic | 30.0% | |
| TCTTTGATACTATGTGATGT+AGG | + | chr6.3:34241748-34241767 | MS.gene98370:intron | 30.0% | |
| TGAGATTAACTCAGTTAGTA+AGG | + | chr6.3:34240752-34240771 | MS.gene98370:intron | 30.0% | |
| TGTAAAAGGGAGTAAAGATA+GGG | - | chr6.3:34240414-34240433 | None:intergenic | 30.0% | |
| TGTGAATCGTAAATATGAGA+AGG | - | chr6.3:34241372-34241391 | None:intergenic | 30.0% | |
| TTCTACATTGTTGGACTATA+CGG | + | chr6.3:34241649-34241668 | MS.gene98370:intron | 30.0% | |
| TTGTAAAAGGGAGTAAAGAT+AGG | - | chr6.3:34240415-34240434 | None:intergenic | 30.0% | |
| TTGTTTATATTTCATTCCGC+AGG | - | chr6.3:34239872-34239891 | None:intergenic | 30.0% | |
| TTTGATACTATGTGATGTAG+GGG | + | chr6.3:34241750-34241769 | MS.gene98370:intron | 30.0% | |
| ! | ACAAGTTAAAGTTGCGATTT+TGG | + | chr6.3:34240359-34240378 | MS.gene98370:intron | 30.0% |
| ! | CATATGATATGGAATTTTGG+TGG | - | chr6.3:34240824-34240843 | None:intergenic | 30.0% |
| ! | CTTCTAGAAATATCTAGAAC+TGG | + | chr6.3:34240160-34240179 | MS.gene98370:intron | 30.0% |
| ! | GGACCATCAATATATTTCTA+AGG | + | chr6.3:34240048-34240067 | MS.gene98370:intron | 30.0% |
| ! | TGAGTTGGAATAGTAATAGT+TGG | - | chr6.3:34238089-34238108 | None:intergenic | 30.0% |
| ! | TTAAGACCTTACTTTGAAAG+TGG | + | chr6.3:34241892-34241911 | MS.gene98370:CDS | 30.0% |
| ! | TTAATCCTGTTGATTACAAG+AGG | + | chr6.3:34238231-34238250 | MS.gene98370:CDS | 30.0% |
| ! | TTTCTAGAAGTTAGTTAAGG+CGG | - | chr6.3:34240150-34240169 | None:intergenic | 30.0% |
| ! | TTTTTATAAGTGGTCCATTG+TGG | - | chr6.3:34241575-34241594 | None:intergenic | 30.0% |
| !! | GAGTGAAAAGGTATGTTTTA+AGG | + | chr6.3:34240973-34240992 | MS.gene98370:intron | 30.0% |
| !!! | GAGGGAGTATTTTTTTTTGA+GGG | + | chr6.3:34238985-34239004 | MS.gene98370:intron | 30.0% |
| AAGTTTGATGTGGTGTATGA+TGG | + | chr6.3:34241191-34241210 | MS.gene98370:CDS | 35.0% | |
| AATTAAAGTGGGAAGTGAAG+TGG | + | chr6.3:34239535-34239554 | MS.gene98370:CDS | 35.0% | |
| ACGAGGACTTTCATATGATA+TGG | - | chr6.3:34240733-34240752 | None:intergenic | 35.0% | |
| AGATGCACCATAAACATGTT+TGG | - | chr6.3:34241066-34241085 | None:intergenic | 35.0% | |
| ATCTCTACAGACAAGTTCTT+TGG | + | chr6.3:34241246-34241265 | MS.gene98370:intron | 35.0% | |
| ATGAAGGCAATTAATGAAGG+TGG | + | chr6.3:34241787-34241806 | MS.gene98370:CDS | 35.0% | |
| CAAACTTGATAGGACCTATA+TGG | - | chr6.3:34239110-34239129 | None:intergenic | 35.0% | |
| CACATAGTATCAAAGATGGA+TGG | - | chr6.3:34241744-34241763 | None:intergenic | 35.0% | |
| CTAACTAAGCTAAGATCTTG+GGG | - | chr6.3:34238648-34238667 | None:intergenic | 35.0% | |
| GAAAATGGTATAGGAGTCTT+TGG | - | chr6.3:34241940-34241959 | None:intergenic | 35.0% | |
| GCTATGAAGGCAATTAATGA+AGG | + | chr6.3:34241784-34241803 | MS.gene98370:CDS | 35.0% | |
| GCTGGCATAGTAATTAAAGT+GGG | + | chr6.3:34239524-34239543 | MS.gene98370:CDS | 35.0% | |
| GGCCCTTAGAAATATATTGA+TGG | - | chr6.3:34240054-34240073 | None:intergenic | 35.0% | |
| GTAAAAGGGAGTAAAGATAG+GGG | - | chr6.3:34240413-34240432 | None:intergenic | 35.0% | |
| GTAGGGACATTACACATTAT+AGG | + | chr6.3:34238667-34238686 | MS.gene98370:intron | 35.0% | |
| TGCTGGCATAGTAATTAAAG+TGG | + | chr6.3:34239523-34239542 | MS.gene98370:CDS | 35.0% | |
| TGGTATTTATAGCCCTTTGT+GGG | - | chr6.3:34240239-34240258 | None:intergenic | 35.0% | |
| TTCCAACTCATACAAAAGCT+TGG | + | chr6.3:34238099-34238118 | MS.gene98370:CDS | 35.0% | |
| TTCCGCAGGAAATTGTTAAT+AGG | - | chr6.3:34239858-34239877 | None:intergenic | 35.0% | |
| TTCTTTGTGCTCACTTCTAA+AGG | + | chr6.3:34241853-34241872 | MS.gene98370:CDS | 35.0% | |
| ! | AACCAAGCTTTTGTATGAGT+TGG | - | chr6.3:34238104-34238123 | None:intergenic | 35.0% |
| ! | ACAAAGTGCCAAGAATCTTT+AGG | - | chr6.3:34239619-34239638 | None:intergenic | 35.0% |
| ! | ACACCACATCAAACTTTTCT+GGG | - | chr6.3:34241187-34241206 | None:intergenic | 35.0% |
| ! | ATGACCTCTGAAAATGGTAT+AGG | - | chr6.3:34241949-34241968 | None:intergenic | 35.0% |
| ! | CTGGAAAAATCGAGTTTTTG+AGG | + | chr6.3:34241108-34241127 | MS.gene98370:CDS | 35.0% |
| ! | GAAGTGGTGAAATTTAAGGT+TGG | + | chr6.3:34239551-34239570 | MS.gene98370:CDS | 35.0% |
| ! | GTGAATTTTGTCACCCATAT+AGG | + | chr6.3:34239093-34239112 | MS.gene98370:intron | 35.0% |
| ! | TACACCACATCAAACTTTTC+TGG | - | chr6.3:34241188-34241207 | None:intergenic | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr6.3:34238967-34238986 | MS.gene98370:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr6.3:34238986-34238967 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr6.3:34238966-34238985 | MS.gene98370:intron | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr6.3:34238985-34238966 | None:intergenic | 35.0% |
| ! | TTTTCATAAGTGGTCACTTG+TGG | + | chr6.3:34241276-34241295 | MS.gene98370:intron | 35.0% |
| !! | AATCGAGTTTTTGAGGAAGT+TGG | + | chr6.3:34241115-34241134 | MS.gene98370:CDS | 35.0% |
| !! | ATCGAGTTTTTGAGGAAGTT+GGG | + | chr6.3:34241116-34241135 | MS.gene98370:CDS | 35.0% |
| !! | TATGGAATTTTGGTGGTTAC+CGG | - | chr6.3:34240817-34240836 | None:intergenic | 35.0% |
| !! | TGGTGGATCATTTTCATAAG+TGG | + | chr6.3:34241266-34241285 | MS.gene98370:intron | 35.0% |
| !!! | GGAGGGAGTATTTTTTTTTG+AGG | + | chr6.3:34238984-34239003 | MS.gene98370:intron | 35.0% |
| AAATCCCTACAGAAAGGCTT+AGG | + | chr6.3:34240076-34240095 | MS.gene98370:intron | 40.0% | |
| AAATCTATCCTTGTCTTGGG+AGG | + | chr6.3:34239773-34239792 | MS.gene98370:CDS | 40.0% | |
| ACAAAATTCACCCTCAAGAG+AGG | - | chr6.3:34239084-34239103 | None:intergenic | 40.0% | |
| AGCTCTTGAAGTCTCTAAGT+AGG | - | chr6.3:34241983-34242002 | None:intergenic | 40.0% | |
| AGGGCTATAAATACCACTCT+TGG | + | chr6.3:34240243-34240262 | MS.gene98370:intron | 40.0% | |
| AGTTGAGGTATGGACCAATT+TGG | - | chr6.3:34238170-34238189 | None:intergenic | 40.0% | |
| CAGCTCTTATGGTGAATAAG+TGG | - | chr6.3:34238722-34238741 | None:intergenic | 40.0% | |
| CAGCTTGCCAAACATGTTTA+TGG | + | chr6.3:34241056-34241075 | MS.gene98370:intron | 40.0% | |
| CATAATATATGCAAGGTCCG+TGG | + | chr6.3:34240783-34240802 | MS.gene98370:intron | 40.0% | |
| CTAACTGAGTTAATCTCACG+AGG | - | chr6.3:34240750-34240769 | None:intergenic | 40.0% | |
| GGCAAATCTATCCTTGTCTT+GGG | + | chr6.3:34239770-34239789 | MS.gene98370:CDS | 40.0% | |
| GGGCTATAAATACCACTCTT+GGG | + | chr6.3:34240244-34240263 | MS.gene98370:intron | 40.0% | |
| GTGAGCACAAAGAAAATAGC+CGG | - | chr6.3:34241847-34241866 | None:intergenic | 40.0% | |
| GTGGTATTTATAGCCCTTTG+TGG | - | chr6.3:34240240-34240259 | None:intergenic | 40.0% | |
| TAAGCTGTCTCCATAGCTAA+AGG | - | chr6.3:34239719-34239738 | None:intergenic | 40.0% | |
| TATGGTGACATCAATGAGGA+AGG | + | chr6.3:34239584-34239603 | MS.gene98370:CDS | 40.0% | |
| TCTACAGACAAGTTCTTTGG+TGG | + | chr6.3:34241249-34241268 | MS.gene98370:intron | 40.0% | |
| TCTCCCAGAAAAGTTTGATG+TGG | + | chr6.3:34241181-34241200 | MS.gene98370:CDS | 40.0% | |
| TGCATCCTCTTGTAATCAAC+AGG | - | chr6.3:34238239-34238258 | None:intergenic | 40.0% | |
| TGCTAGCATTCCTTTAGCTA+TGG | + | chr6.3:34239706-34239725 | MS.gene98370:CDS | 40.0% | |
| TGGCAAATCTATCCTTGTCT+TGG | + | chr6.3:34239769-34239788 | MS.gene98370:CDS | 40.0% | |
| TTAGAGACTTCAAGAGCTAC+CGG | + | chr6.3:34241985-34242004 | MS.gene98370:CDS | 40.0% | |
| TTGTGTGAGAAGATTGTACC+AGG | + | chr6.3:34239491-34239510 | MS.gene98370:intron | 40.0% | |
| ! | AGCCTTTCTGTAGGGATTTT+AGG | - | chr6.3:34240075-34240094 | None:intergenic | 40.0% |
| ! | GACTCCTATACCATTTTCAG+AGG | + | chr6.3:34241942-34241961 | MS.gene98370:CDS | 40.0% |
| ! | GCTTCAATGACCTCTGAAAA+TGG | - | chr6.3:34241955-34241974 | None:intergenic | 40.0% |
| ! | GTATCAAAGATGGATGGACT+TGG | - | chr6.3:34241738-34241757 | None:intergenic | 40.0% |
| !! | ACTTGGTCATCTTTGAGTTG+AGG | - | chr6.3:34238185-34238204 | None:intergenic | 40.0% |
| !! | AGTTGGAAGCTTTGCTATTC+AGG | + | chr6.3:34239805-34239824 | MS.gene98370:CDS | 40.0% |
| !! | ATGGAATTTTGGTGGTTACC+GGG | - | chr6.3:34240816-34240835 | None:intergenic | 40.0% |
| !! | GGGATAAATGACCACTTTTC+CGG | - | chr6.3:34242007-34242026 | None:intergenic | 40.0% |
| !! | GTCATCTTTGAGTTGAGGTA+TGG | - | chr6.3:34238180-34238199 | None:intergenic | 40.0% |
| !! | TGATGTAGGGGAAGTTGATA+GGG | + | chr6.3:34241762-34241781 | MS.gene98370:intron | 40.0% |
| AAAATAGCCGGTGGAAATCC+AGG | - | chr6.3:34241835-34241854 | None:intergenic | 45.0% | |
| AAGCAGCAACAACCTTGATG+AGG | - | chr6.3:34238208-34238227 | None:intergenic | 45.0% | |
| ACCTTAAAGTGTACTCCCTC+CGG | + | chr6.3:34238832-34238851 | MS.gene98370:intron | 45.0% | |
| AGATGACCAAGTCCTCATCA+AGG | + | chr6.3:34238193-34238212 | MS.gene98370:CDS | 45.0% | |
| AGCACAAAGAAAATAGCCGG+TGG | - | chr6.3:34241844-34241863 | None:intergenic | 45.0% | |
| AGGGTCAGTGTCCTTGAATA+AGG | - | chr6.3:34238264-34238283 | None:intergenic | 45.0% | |
| ATAGCAGCAACTTCTAGCAC+TGG | + | chr6.3:34241089-34241108 | MS.gene98370:CDS | 45.0% | |
| CAACAACCTTGATGAGGACT+TGG | - | chr6.3:34238202-34238221 | None:intergenic | 45.0% | |
| CACTCTTGGGATCATTCTCA+AGG | + | chr6.3:34240257-34240276 | MS.gene98370:intron | 45.0% | |
| CTTGAGAATGATCCCAAGAG+TGG | - | chr6.3:34240259-34240278 | None:intergenic | 45.0% | |
| GCTATGGAGACAGCTTATGA+AGG | + | chr6.3:34239722-34239741 | MS.gene98370:CDS | 45.0% | |
| GGCCTAAAATCCCTACAGAA+AGG | + | chr6.3:34240070-34240089 | MS.gene98370:intron | 45.0% | |
| GTTGTGACAATAGTACCTCC+TGG | + | chr6.3:34241814-34241833 | MS.gene98370:CDS | 45.0% | |
| TTACTTAAGCCCCAAGCAAG+CGG | - | chr6.3:34240204-34240223 | None:intergenic | 45.0% | |
| TTCAAGAGCTACCGGAAAAG+TGG | + | chr6.3:34241993-34242012 | MS.gene98370:CDS | 45.0% | |
| ! | GAGGATGCATGCCTTATTCA+AGG | + | chr6.3:34238250-34238269 | MS.gene98370:CDS | 45.0% |
| ! | GATGTGGTGTATGATGGAGT+AGG | + | chr6.3:34241197-34241216 | MS.gene98370:CDS | 45.0% |
| ! | GTGAATAAGTGGAGTGTCTG+AGG | - | chr6.3:34238711-34238730 | None:intergenic | 45.0% |
| ! | GTGATGTAGGGGAAGTTGAT+AGG | + | chr6.3:34241761-34241780 | MS.gene98370:intron | 45.0% |
| ! | TCAGAAGCGCATTGTACTTG+CGG | - | chr6.3:34240327-34240346 | None:intergenic | 45.0% |
| !! | GCTTGGTTCTACTCTGAACA+TGG | + | chr6.3:34238116-34238135 | MS.gene98370:CDS | 45.0% |
| !! | GGAAGTTGATAGGGCTATGA+AGG | + | chr6.3:34241771-34241790 | MS.gene98370:CDS | 45.0% |
| !!! | ATTTTTTTTATTTATTTAAG+GGG | + | chr6.3:34240541-34240560 | MS.gene98370:intron | 5.0% |
| ACGCTAACACAAGCCCACAA+AGG | + | chr6.3:34240223-34240242 | MS.gene98370:intron | 50.0% | |
| AGTACCTCCTGGATTTCCAC+CGG | + | chr6.3:34241825-34241844 | MS.gene98370:CDS | 50.0% | |
| ATGCCAGCAACATCAAAGCC+TGG | - | chr6.3:34239512-34239531 | None:intergenic | 50.0% | |
| CGCTAACACAAGCCCACAAA+GGG | + | chr6.3:34240224-34240243 | MS.gene98370:intron | 50.0% | |
| GGAGTCTTTGGGTCAAGCAT+TGG | - | chr6.3:34241928-34241947 | None:intergenic | 50.0% | |
| GGCACCTAAGCCTTTCTGTA+GGG | - | chr6.3:34240083-34240102 | None:intergenic | 50.0% | |
| GTTAGTTAAGGCGGCATCTC+TGG | - | chr6.3:34240141-34240160 | None:intergenic | 50.0% | |
| TACTTAAGCCCCAAGCAAGC+GGG | - | chr6.3:34240203-34240222 | None:intergenic | 50.0% | |
| ! | ACCGGAGGGAGTACACTTTA+AGG | - | chr6.3:34238836-34238855 | None:intergenic | 50.0% |
| ! | GTACCAGGCTTTGATGTTGC+TGG | + | chr6.3:34239506-34239525 | MS.gene98370:CDS | 50.0% |
| ! | TTAAGGCGGCATCTCTGGAA+GGG | - | chr6.3:34240136-34240155 | None:intergenic | 50.0% |
| AAGGTCCGTGGTTCAAAGCC+CGG | + | chr6.3:34240795-34240814 | MS.gene98370:intron | 55.0% | |
| ACCTACAACCCCGCTTGCTT+GGG | + | chr6.3:34240191-34240210 | MS.gene98370:intron | 55.0% | |
| ACTTAAGCCCCAAGCAAGCG+GGG | - | chr6.3:34240202-34240221 | None:intergenic | 55.0% | |
| AGGCTTAGGTGCCCTCTAGA+AGG | + | chr6.3:34240090-34240109 | MS.gene98370:intron | 55.0% | |
| ATAGCCGGTGGAAATCCAGG+AGG | - | chr6.3:34241832-34241851 | None:intergenic | 55.0% | |
| GAGAGAGCTGAGCTTTCTGC+TGG | + | chr6.3:34239749-34239768 | MS.gene98370:CDS | 55.0% | |
| GCTTCAGGAGCCCTTCTAGA+GGG | - | chr6.3:34240104-34240123 | None:intergenic | 55.0% | |
| GGGCACCTAAGCCTTTCTGT+AGG | - | chr6.3:34240084-34240103 | None:intergenic | 55.0% | |
| GTTAAGGCGGCATCTCTGGA+AGG | - | chr6.3:34240137-34240156 | None:intergenic | 55.0% | |
| TAGAAGGGCTCCTGAAGCCT+AGG | + | chr6.3:34240106-34240125 | MS.gene98370:intron | 55.0% | |
| ! | ATCCTTGTCTTGGGAGGTGC+TGG | + | chr6.3:34239779-34239798 | MS.gene98370:CDS | 55.0% |
| ! | GGCTTAGGTGCCCTCTAGAA+GGG | + | chr6.3:34240091-34240110 | MS.gene98370:intron | 55.0% |
| !! | CGCATGAGTGAGCGTTGACT+TGG | - | chr6.3:34240452-34240471 | None:intergenic | 55.0% |
| !! | GGTTACCGGGCTTTGAACCA+CGG | - | chr6.3:34240803-34240822 | None:intergenic | 55.0% |
| CACCAGCACCTCCCAAGACA+AGG | - | chr6.3:34239784-34239803 | None:intergenic | 60.0% | |
| CCTACAACCCCGCTTGCTTG+GGG | + | chr6.3:34240192-34240211 | MS.gene98370:intron | 60.0% | |
| GACCTACAACCCCGCTTGCT+TGG | + | chr6.3:34240190-34240209 | MS.gene98370:intron | 60.0% | |
| GGCTTCAGGAGCCCTTCTAG+AGG | - | chr6.3:34240105-34240124 | None:intergenic | 60.0% | |
| !! | CTTGTCTTGGGAGGTGCTGG+TGG | + | chr6.3:34239782-34239801 | MS.gene98370:CDS | 60.0% |
| !! | TTGGGAGGTGCTGGTGGAGT+TGG | + | chr6.3:34239788-34239807 | MS.gene98370:CDS | 60.0% |
| CCCCAAGCAAGCGGGGTTGT+AGG | - | chr6.3:34240195-34240214 | None:intergenic | 65.0% | |
| ! | ATCTCTGGAAGGGCGCGCCT+AGG | - | chr6.3:34240126-34240145 | None:intergenic | 65.0% |
| ! | GAAGGGCGCGCCTAGGCTTC+AGG | - | chr6.3:34240119-34240138 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 34238059 | 34242035 | 34238059 | ID=MS.gene98370 |
| chr6.3 | mRNA | 34238059 | 34242035 | 34238059 | ID=MS.gene98370.t1;Parent=MS.gene98370 |
| chr6.3 | exon | 34238059 | 34238292 | 34238059 | ID=MS.gene98370.t1.exon1;Parent=MS.gene98370.t1 |
| chr6.3 | CDS | 34238059 | 34238292 | 34238059 | ID=cds.MS.gene98370.t1;Parent=MS.gene98370.t1 |
| chr6.3 | exon | 34239503 | 34239826 | 34239503 | ID=MS.gene98370.t1.exon2;Parent=MS.gene98370.t1 |
| chr6.3 | CDS | 34239503 | 34239826 | 34239503 | ID=cds.MS.gene98370.t1;Parent=MS.gene98370.t1 |
| chr6.3 | exon | 34241059 | 34241218 | 34241059 | ID=MS.gene98370.t1.exon3;Parent=MS.gene98370.t1 |
| chr6.3 | CDS | 34241059 | 34241218 | 34241059 | ID=cds.MS.gene98370.t1;Parent=MS.gene98370.t1 |
| chr6.3 | exon | 34241770 | 34242035 | 34241770 | ID=MS.gene98370.t1.exon4;Parent=MS.gene98370.t1 |
| chr6.3 | CDS | 34241770 | 34242035 | 34241770 | ID=cds.MS.gene98370.t1;Parent=MS.gene98370.t1 |
| Gene Sequence |
| Protein sequence |
