Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057548.t1 | XP_003621331.1 | 91.8 | 367 | 30 | 0 | 1 | 367 | 1 | 367 | 2.20E-195 | 691.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057548.t1 | P93324 | 63.0 | 373 | 128 | 4 | 2 | 367 | 3 | 372 | 2.8e-130 | 466.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057548.t1 | G7L359 | 91.8 | 367 | 30 | 0 | 1 | 367 | 1 | 367 | 1.6e-195 | 691.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051044 | MS.gene057548 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene057548 | 0.802753 | 4.83E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene057548 | 0.803709 | 3.06E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene057548 | 0.850571 | 1.56E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene057548 | 0.822248 | 2.62E-53 | -1.69E-46 |
| MS.gene056224 | MS.gene057548 | 0.819427 | 1.17E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene057548 | 0.811726 | 6.06E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene057548 | 0.809381 | 1.95E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene057548 | 0.811427 | 7.04E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene057549 | 0.8513 | 9.71E-61 | -1.69E-46 |
| MS.gene057548 | MS.gene058099 | 0.821082 | 4.88E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene058382 | 0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene057548 | MS.gene058603 | 0.8129 | 3.36E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene061044 | 0.801828 | 7.49E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene061683 | 0.817535 | 3.14E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene061777 | 0.824616 | 7.33E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene062572 | 0.821475 | 3.96E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene063148 | 0.825876 | 3.69E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene063436 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene065424 | 0.80306 | 4.17E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene065426 | 0.830132 | 3.49E-55 | -1.69E-46 |
| MS.gene057548 | MS.gene069482 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene071858 | 0.81714 | 3.85E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene072378 | 0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene073165 | 0.812348 | 4.44E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene073188 | 0.805934 | 1.05E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene074094 | 0.831597 | 1.53E-55 | -1.69E-46 |
| MS.gene057548 | MS.gene08407 | 0.836745 | 7.82E-57 | -1.69E-46 |
| MS.gene057548 | MS.gene08721 | 0.821515 | 3.88E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene09162 | 0.827751 | 1.32E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene21350 | 0.809075 | 2.26E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene21577 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene21768 | 0.81713 | 3.87E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene21772 | 0.804064 | 2.58E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene21851 | 0.811719 | 6.08E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene21870 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene24540 | 0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene24882 | 0.814017 | 1.91E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene24883 | 0.820968 | 5.18E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene25062 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene25134 | 0.81076 | 9.82E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene26403 | 0.809165 | 2.17E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene26474 | 0.827769 | 1.30E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene26475 | 0.823336 | 1.46E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene26517 | 0.81255 | 4.01E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene28077 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene28594 | 0.801525 | 8.64E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene30459 | 0.80706 | 6.08E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene31867 | 0.819429 | 1.17E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene32972 | 0.804285 | 2.32E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene33490 | 0.803575 | 3.27E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene34968 | 0.807393 | 5.17E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene35208 | 0.833517 | 5.10E-56 | -1.69E-46 |
| MS.gene057548 | MS.gene37357 | 0.805803 | 1.12E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene38706 | 0.807887 | 4.06E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene39534 | 0.823665 | 1.23E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene39535 | 0.814225 | 1.72E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene42005 | 0.815229 | 1.03E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene45224 | 0.834685 | 2.60E-56 | -1.69E-46 |
| MS.gene057548 | MS.gene45228 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene45763 | 0.802253 | 6.13E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene46057 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene46060 | 0.807286 | 5.44E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene46197 | 0.806073 | 9.82E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene46198 | 0.814899 | 1.22E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene47576 | 0.821364 | 4.20E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene47841 | 0.802139 | 6.47E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene50620 | 0.827858 | 1.24E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene51522 | 0.820362 | 7.14E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene51748 | 0.809887 | 1.51E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene52027 | 0.800007 | 1.76E-48 | -1.69E-46 |
| MS.gene057548 | MS.gene53442 | 0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene057548 | MS.gene55697 | 0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene56389 | 0.801427 | 9.05E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene56765 | 0.818218 | 2.20E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene57291 | 0.825774 | 3.90E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene57987 | 0.802547 | 5.33E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene58223 | 0.806373 | 8.49E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene59037 | 0.80261 | 5.17E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene59333 | 0.833881 | 4.13E-56 | -1.69E-46 |
| MS.gene057548 | MS.gene59415 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene63444 | 0.820765 | 5.77E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene63642 | 0.803217 | 3.87E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene64553 | 0.833108 | 6.45E-56 | -1.69E-46 |
| MS.gene057548 | MS.gene64708 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene68203 | 0.811434 | 7.02E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene69635 | 0.818826 | 1.60E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene72323 | 0.808693 | 2.73E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene72929 | 0.820698 | 5.98E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene73200 | 0.8224 | 2.42E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene73788 | 0.811126 | 8.18E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene74446 | 0.800971 | 1.12E-48 | -1.69E-46 |
| MS.gene057548 | MS.gene77768 | 0.805866 | 1.09E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene77829 | 0.801416 | 9.10E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene79178 | 0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene79260 | 0.815967 | 7.05E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene79518 | 0.827605 | 1.43E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene79519 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene80468 | 0.81874 | 1.67E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene81505 | 0.803799 | 2.93E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene81506 | 0.802464 | 5.54E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene81725 | 0.822499 | 2.29E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene82112 | 0.81565 | 8.29E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene83129 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene83239 | 0.806057 | 9.90E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene84157 | 0.813116 | 3.01E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene88880 | 0.806718 | 7.18E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene88882 | 0.802468 | 5.53E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene90315 | 0.831081 | 2.04E-55 | -1.69E-46 |
| MS.gene057548 | MS.gene90522 | 0.81946 | 1.15E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene91215 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene91317 | 0.816453 | 5.49E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene91703 | 0.812193 | 4.79E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene92808 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene93455 | 0.802455 | 5.57E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene94263 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene95132 | 0.825836 | 3.77E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene96299 | 0.81874 | 1.67E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene97131 | 0.801891 | 7.27E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene97600 | 0.965945 | 2.88E-125 | -1.69E-46 |
| MS.gene057548 | MS.gene97601 | 0.847816 | 9.10E-60 | -1.69E-46 |
| MS.gene057548 | MS.gene98370 | 0.809878 | 1.52E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene98371 | 0.83287 | 7.39E-56 | -1.69E-46 |
| MS.gene057548 | MS.gene98475 | 0.817838 | 2.68E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene98480 | 0.810638 | 1.04E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene99388 | 0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene99553 | 0.805228 | 1.48E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057548.t1 | MTR_7g011990 | 91.826 | 367 | 30 | 0 | 1 | 367 | 1 | 367 | 0.0 | 705 |
| MS.gene057548.t1 | MTR_7g011900 | 78.226 | 372 | 74 | 3 | 1 | 367 | 1 | 370 | 0.0 | 603 |
| MS.gene057548.t1 | MTR_7g012020 | 72.087 | 369 | 98 | 2 | 3 | 367 | 2 | 369 | 0.0 | 563 |
| MS.gene057548.t1 | MTR_7g012040 | 73.171 | 369 | 93 | 2 | 3 | 367 | 2 | 368 | 0.0 | 559 |
| MS.gene057548.t1 | MTR_7g012070 | 67.553 | 376 | 112 | 3 | 1 | 367 | 1 | 375 | 0.0 | 529 |
| MS.gene057548.t1 | MTR_7g012090 | 67.819 | 376 | 111 | 3 | 1 | 367 | 1 | 375 | 0.0 | 528 |
| MS.gene057548.t1 | MTR_2g055940 | 66.129 | 372 | 112 | 4 | 1 | 367 | 1 | 363 | 0.0 | 508 |
| MS.gene057548.t1 | MTR_1g096310 | 63.003 | 373 | 128 | 4 | 2 | 367 | 3 | 372 | 1.12e-170 | 480 |
| MS.gene057548.t1 | MTR_7g012020 | 73.455 | 275 | 68 | 2 | 3 | 273 | 2 | 275 | 2.01e-148 | 421 |
| MS.gene057548.t1 | MTR_7g012020 | 74.206 | 252 | 60 | 2 | 3 | 250 | 2 | 252 | 2.17e-136 | 389 |
| MS.gene057548.t1 | MTR_1g036460 | 50.000 | 372 | 173 | 6 | 5 | 367 | 3 | 370 | 3.22e-130 | 378 |
| MS.gene057548.t1 | MTR_1g036490 | 48.656 | 372 | 178 | 6 | 5 | 367 | 3 | 370 | 7.85e-129 | 374 |
| MS.gene057548.t1 | MTR_3g021440 | 52.557 | 352 | 159 | 5 | 21 | 367 | 22 | 370 | 2.45e-120 | 352 |
| MS.gene057548.t1 | MTR_1g036510 | 50.423 | 355 | 164 | 5 | 22 | 367 | 33 | 384 | 5.95e-120 | 352 |
| MS.gene057548.t1 | MTR_3g021430 | 53.125 | 352 | 157 | 5 | 21 | 367 | 9 | 357 | 7.23e-120 | 351 |
| MS.gene057548.t1 | MTR_3g092900 | 45.730 | 363 | 186 | 7 | 10 | 367 | 7 | 363 | 1.74e-103 | 309 |
| MS.gene057548.t1 | MTR_5g098170 | 41.061 | 358 | 196 | 8 | 19 | 367 | 12 | 363 | 2.24e-90 | 276 |
| MS.gene057548.t1 | MTR_0591s0010 | 41.176 | 357 | 198 | 8 | 19 | 367 | 25 | 377 | 2.85e-88 | 271 |
| MS.gene057548.t1 | MTR_7g118300 | 40.761 | 368 | 208 | 7 | 5 | 367 | 13 | 375 | 5.61e-88 | 270 |
| MS.gene057548.t1 | MTR_7g118320 | 41.176 | 357 | 198 | 7 | 19 | 367 | 10 | 362 | 2.68e-85 | 263 |
| MS.gene057548.t1 | MTR_8g068690 | 39.776 | 357 | 203 | 8 | 19 | 367 | 24 | 376 | 1.97e-82 | 256 |
| MS.gene057548.t1 | MTR_1g050220 | 43.161 | 329 | 130 | 6 | 26 | 347 | 6 | 284 | 3.07e-82 | 253 |
| MS.gene057548.t1 | MTR_8g068750 | 39.216 | 357 | 205 | 8 | 19 | 367 | 25 | 377 | 3.96e-82 | 255 |
| MS.gene057548.t1 | MTR_1g036510 | 51.562 | 256 | 113 | 4 | 22 | 269 | 33 | 285 | 3.64e-80 | 247 |
| MS.gene057548.t1 | MTR_8g068870 | 39.412 | 340 | 195 | 6 | 35 | 367 | 28 | 363 | 2.49e-78 | 245 |
| MS.gene057548.t1 | MTR_6g060290 | 62.162 | 185 | 51 | 4 | 1 | 181 | 1 | 170 | 6.24e-71 | 219 |
| MS.gene057548.t1 | MTR_8g068570 | 39.506 | 324 | 158 | 7 | 19 | 334 | 25 | 318 | 1.33e-70 | 224 |
| MS.gene057548.t1 | MTR_6g078850 | 39.155 | 355 | 203 | 8 | 21 | 366 | 32 | 382 | 1.02e-68 | 224 |
| MS.gene057548.t1 | MTR_1g036510 | 49.362 | 235 | 108 | 4 | 22 | 248 | 33 | 264 | 7.51e-68 | 215 |
| MS.gene057548.t1 | MTR_8g024160 | 42.803 | 264 | 146 | 4 | 105 | 367 | 69 | 328 | 7.55e-67 | 214 |
| MS.gene057548.t1 | MTR_2g072790 | 38.462 | 325 | 183 | 9 | 33 | 348 | 20 | 336 | 7.23e-61 | 199 |
| MS.gene057548.t1 | MTR_8g068730 | 34.540 | 359 | 187 | 10 | 19 | 367 | 25 | 345 | 3.44e-58 | 192 |
| MS.gene057548.t1 | MTR_8g068690 | 39.615 | 260 | 147 | 6 | 19 | 271 | 24 | 280 | 6.47e-55 | 182 |
| MS.gene057548.t1 | MTR_3g096050 | 35.674 | 356 | 201 | 12 | 26 | 367 | 17 | 358 | 2.96e-54 | 182 |
| MS.gene057548.t1 | MTR_3g096070 | 34.911 | 338 | 176 | 11 | 26 | 352 | 17 | 321 | 2.20e-50 | 172 |
| MS.gene057548.t1 | MTR_3g083620 | 33.438 | 320 | 197 | 9 | 39 | 352 | 38 | 347 | 2.70e-49 | 169 |
| MS.gene057548.t1 | MTR_0017s0100 | 33.540 | 322 | 195 | 11 | 41 | 353 | 44 | 355 | 6.00e-47 | 164 |
| MS.gene057548.t1 | MTR_0079s0070 | 33.127 | 323 | 195 | 11 | 41 | 353 | 10 | 321 | 2.40e-46 | 161 |
| MS.gene057548.t1 | MTR_8g068600 | 36.719 | 256 | 145 | 6 | 46 | 287 | 27 | 279 | 2.45e-46 | 160 |
| MS.gene057548.t1 | MTR_4g038440 | 33.127 | 323 | 195 | 11 | 41 | 353 | 44 | 355 | 5.01e-46 | 161 |
| MS.gene057548.t1 | MTR_1g076940 | 30.625 | 320 | 209 | 6 | 41 | 352 | 33 | 347 | 7.99e-45 | 158 |
| MS.gene057548.t1 | MTR_4g033015 | 32.945 | 343 | 202 | 10 | 40 | 366 | 32 | 362 | 2.15e-44 | 157 |
| MS.gene057548.t1 | MTR_4g033200 | 32.653 | 343 | 203 | 10 | 40 | 366 | 32 | 362 | 1.37e-43 | 155 |
| MS.gene057548.t1 | MTR_5g074600 | 28.846 | 312 | 204 | 9 | 65 | 366 | 55 | 358 | 5.31e-42 | 150 |
| MS.gene057548.t1 | MTR_4g033150 | 30.904 | 343 | 209 | 10 | 40 | 366 | 32 | 362 | 7.54e-41 | 147 |
| MS.gene057548.t1 | MTR_4g088345 | 28.571 | 336 | 223 | 9 | 38 | 366 | 30 | 355 | 2.94e-40 | 145 |
| MS.gene057548.t1 | MTR_4g088340 | 27.596 | 337 | 225 | 7 | 38 | 366 | 7 | 332 | 3.39e-40 | 145 |
| MS.gene057548.t1 | MTR_4g088200 | 30.091 | 329 | 215 | 8 | 34 | 353 | 26 | 348 | 7.06e-40 | 145 |
| MS.gene057548.t1 | MTR_3g096050 | 38.340 | 253 | 137 | 9 | 26 | 269 | 17 | 259 | 7.09e-40 | 142 |
| MS.gene057548.t1 | MTR_8g068740 | 32.721 | 272 | 141 | 7 | 19 | 283 | 25 | 261 | 7.46e-40 | 142 |
| MS.gene057548.t1 | MTR_7g014570 | 28.313 | 332 | 219 | 7 | 41 | 366 | 33 | 351 | 1.41e-39 | 144 |
| MS.gene057548.t1 | MTR_5g074680 | 27.859 | 341 | 230 | 9 | 34 | 366 | 27 | 359 | 4.26e-39 | 143 |
| MS.gene057548.t1 | MTR_7g024500 | 29.259 | 270 | 177 | 6 | 81 | 347 | 73 | 331 | 4.23e-38 | 140 |
| MS.gene057548.t1 | MTR_5g074580 | 31.818 | 242 | 159 | 4 | 130 | 366 | 119 | 359 | 4.73e-38 | 140 |
| MS.gene057548.t1 | MTR_7g014510 | 27.213 | 305 | 208 | 7 | 66 | 366 | 62 | 356 | 2.03e-36 | 135 |
| MS.gene057548.t1 | MTR_7g024520 | 28.727 | 275 | 182 | 6 | 81 | 352 | 73 | 336 | 2.83e-36 | 135 |
| MS.gene057548.t1 | MTR_4g088190 | 30.655 | 336 | 207 | 8 | 34 | 353 | 26 | 351 | 1.26e-35 | 133 |
| MS.gene057548.t1 | MTR_5g074540 | 32.340 | 235 | 153 | 3 | 137 | 366 | 107 | 340 | 1.60e-35 | 132 |
| MS.gene057548.t1 | MTR_4g079160 | 35.204 | 196 | 123 | 2 | 162 | 353 | 147 | 342 | 4.17e-34 | 129 |
| MS.gene057548.t1 | MTR_8g068620 | 51.818 | 110 | 53 | 0 | 161 | 270 | 2 | 111 | 1.11e-33 | 121 |
| MS.gene057548.t1 | MTR_4g033170 | 28.869 | 336 | 219 | 9 | 40 | 366 | 32 | 356 | 6.83e-31 | 120 |
| MS.gene057548.t1 | MTR_5g074610 | 34.524 | 168 | 106 | 2 | 202 | 366 | 159 | 325 | 1.48e-29 | 116 |
| MS.gene057548.t1 | MTR_1g076930 | 30.672 | 238 | 152 | 6 | 38 | 269 | 7 | 237 | 4.58e-29 | 113 |
| MS.gene057548.t1 | MTR_4g033085 | 28.274 | 336 | 221 | 9 | 40 | 366 | 32 | 356 | 1.06e-28 | 114 |
| MS.gene057548.t1 | MTR_4g038440 | 31.092 | 238 | 144 | 8 | 41 | 269 | 44 | 270 | 6.16e-24 | 100 |
| MS.gene057548.t1 | MTR_0794s0020 | 29.075 | 227 | 139 | 7 | 40 | 254 | 32 | 248 | 2.86e-21 | 92.0 |
| MS.gene057548.t1 | MTR_8g068760 | 38.596 | 114 | 65 | 3 | 258 | 367 | 121 | 233 | 2.46e-18 | 83.6 |
| MS.gene057548.t1 | MTR_6g060280 | 54.930 | 71 | 26 | 2 | 221 | 286 | 1 | 70 | 7.58e-16 | 72.0 |
| MS.gene057548.t1 | MTR_8g068580 | 42.391 | 92 | 51 | 2 | 277 | 367 | 43 | 133 | 4.80e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057548.t1 | AT5G54160 | 46.839 | 348 | 179 | 4 | 15 | 359 | 10 | 354 | 4.07e-106 | 316 |
| MS.gene057548.t1 | AT1G51990 | 37.677 | 353 | 210 | 4 | 21 | 366 | 12 | 361 | 5.07e-82 | 254 |
| MS.gene057548.t1 | AT1G77520 | 40.000 | 355 | 198 | 9 | 25 | 367 | 30 | 381 | 9.32e-82 | 254 |
| MS.gene057548.t1 | AT1G51990 | 37.677 | 353 | 210 | 4 | 21 | 366 | 12 | 361 | 2.11e-81 | 253 |
| MS.gene057548.t1 | AT1G33030 | 38.527 | 353 | 206 | 9 | 21 | 367 | 3 | 350 | 6.84e-75 | 236 |
| MS.gene057548.t1 | AT1G21100 | 41.370 | 365 | 191 | 10 | 5 | 357 | 11 | 364 | 3.17e-73 | 232 |
| MS.gene057548.t1 | AT1G63140 | 40.331 | 362 | 195 | 12 | 21 | 367 | 46 | 401 | 4.87e-73 | 233 |
| MS.gene057548.t1 | AT1G63140 | 40.331 | 362 | 195 | 12 | 21 | 367 | 26 | 381 | 5.04e-73 | 232 |
| MS.gene057548.t1 | AT1G21130 | 41.547 | 349 | 187 | 9 | 21 | 357 | 21 | 364 | 2.32e-72 | 230 |
| MS.gene057548.t1 | AT1G21110 | 41.096 | 365 | 192 | 10 | 5 | 357 | 11 | 364 | 6.21e-71 | 226 |
| MS.gene057548.t1 | AT5G53810 | 39.474 | 342 | 193 | 7 | 38 | 367 | 39 | 378 | 1.33e-70 | 226 |
| MS.gene057548.t1 | AT1G21120 | 40.730 | 356 | 194 | 9 | 14 | 357 | 14 | 364 | 8.09e-70 | 223 |
| MS.gene057548.t1 | AT1G77530 | 38.873 | 355 | 202 | 9 | 25 | 367 | 30 | 381 | 3.74e-69 | 222 |
| MS.gene057548.t1 | AT1G21120 | 40.974 | 349 | 189 | 9 | 21 | 357 | 69 | 412 | 5.01e-69 | 223 |
| MS.gene057548.t1 | AT1G76790 | 38.441 | 372 | 197 | 11 | 17 | 367 | 5 | 365 | 5.03e-65 | 211 |
| MS.gene057548.t1 | AT3G53140 | 36.982 | 338 | 186 | 10 | 26 | 347 | 14 | 340 | 4.07e-60 | 198 |
| MS.gene057548.t1 | AT1G62900 | 46.798 | 203 | 105 | 3 | 167 | 367 | 4 | 205 | 2.21e-57 | 186 |
| MS.gene057548.t1 | AT5G37170 | 35.938 | 320 | 162 | 10 | 57 | 367 | 49 | 334 | 1.06e-52 | 178 |
| MS.gene057548.t1 | AT5G37170 | 43.434 | 198 | 108 | 4 | 173 | 367 | 38 | 234 | 7.02e-50 | 167 |
| MS.gene057548.t1 | AT1G33030 | 37.354 | 257 | 152 | 7 | 21 | 272 | 3 | 255 | 2.71e-47 | 162 |
| MS.gene057548.t1 | AT5G37170 | 43.316 | 187 | 102 | 4 | 184 | 367 | 1 | 186 | 1.53e-46 | 157 |
| MS.gene057548.t1 | AT1G33030 | 37.402 | 254 | 150 | 7 | 21 | 269 | 3 | 252 | 4.88e-46 | 158 |
| MS.gene057548.t1 | AT1G21130 | 41.455 | 275 | 140 | 8 | 5 | 269 | 11 | 274 | 3.03e-45 | 157 |
| MS.gene057548.t1 | AT1G63140 | 39.695 | 262 | 140 | 9 | 21 | 269 | 46 | 302 | 6.18e-43 | 151 |
| MS.gene057548.t1 | AT4G35150 | 39.247 | 186 | 103 | 5 | 177 | 352 | 125 | 310 | 3.49e-39 | 142 |
| MS.gene057548.t1 | AT4G35160 | 32.326 | 331 | 200 | 10 | 39 | 352 | 44 | 367 | 2.33e-38 | 141 |
| MS.gene057548.t1 | AT1G77530 | 36.441 | 236 | 138 | 6 | 25 | 250 | 30 | 263 | 1.44e-33 | 125 |
| MS.gene057548.t1 | AT1G63140 | 38.136 | 236 | 128 | 9 | 21 | 243 | 46 | 276 | 1.04e-32 | 124 |
Find 76 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTAAAGAATATGAAATTT+TGG | 0.154985 | 7.2:+85356820 | MS.gene057548:CDS |
| TCATTGATTTGTTGAATATT+TGG | 0.166485 | 7.2:-85355533 | None:intergenic |
| GACCTATTCAAGAGAGTTAA+TGG | 0.217823 | 7.2:+85355468 | MS.gene057548:CDS |
| TGTTGTGCTTTCTCCGTTAT+TGG | 0.235040 | 7.2:+85356878 | MS.gene057548:CDS |
| CACAAAGCTTTGCCTCAAAA+TGG | 0.243448 | 7.2:+85356680 | MS.gene057548:CDS |
| CTGGATGCATTTGTTGGTTC+TGG | 0.255940 | 7.2:-85356740 | None:intergenic |
| CATGGTACTAGGTGCCAATT+TGG | 0.262380 | 7.2:+85347355 | MS.gene057548:CDS |
| CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7.2:+85347410 | MS.gene057548:CDS |
| ATGTGTCACCCTGCTTTGAT+AGG | 0.308455 | 7.2:+85347671 | MS.gene057548:CDS |
| GTTCACTTTGTCATTGGAAT+AGG | 0.323507 | 7.2:-85347279 | None:intergenic |
| AAATTGATTCCCTTAATTGA+TGG | 0.325335 | 7.2:-85355681 | None:intergenic |
| GATACCAACCTTAAGCATTA+TGG | 0.328993 | 7.2:-85356485 | None:intergenic |
| AACATACGGTCAAGCCGATT+TGG | 0.331158 | 7.2:-85347494 | None:intergenic |
| CGTATCCTTTGTATATTTCA+AGG | 0.331846 | 7.2:-85355587 | None:intergenic |
| AACATGGTTCACTTTGTCAT+TGG | 0.374912 | 7.2:-85347285 | None:intergenic |
| TTCCATTAACTCTCTTGAAT+AGG | 0.377289 | 7.2:-85355470 | None:intergenic |
| TATAGGCTGTATGTCATAAT+TGG | 0.383617 | 7.2:+85356621 | MS.gene057548:intron |
| AACTGCAGGGAAAACCAAAT+TGG | 0.383917 | 7.2:-85347369 | None:intergenic |
| AACACTCTGATTTGCCAAAT+CGG | 0.383968 | 7.2:+85347480 | MS.gene057548:CDS |
| AATAGTGATCATGGTTATCT+TGG | 0.384090 | 7.2:+85347632 | MS.gene057548:CDS |
| GTCTCATTGTCATCTATTTG+TGG | 0.384436 | 7.2:-85347323 | None:intergenic |
| TTCAACAAATCAATGACTAA+TGG | 0.387609 | 7.2:+85355540 | MS.gene057548:CDS |
| CTCTTGAATAGGTCAATCTC+TGG | 0.389759 | 7.2:-85355459 | None:intergenic |
| GTTGATGTTGGAGGTGGAAA+TGG | 0.399088 | 7.2:+85355627 | MS.gene057548:CDS |
| CACAATGCTGCCATCATCAT+TGG | 0.400435 | 7.2:-85347561 | None:intergenic |
| ATCAATAATTGAAACAAGTC+TGG | 0.402872 | 7.2:-85356759 | None:intergenic |
| TGTTTATAGGTTAAATTTCA+AGG | 0.442253 | 7.2:+85355422 | MS.gene057548:intron |
| ACACTCTCTGCCATGGTACT+AGG | 0.442707 | 7.2:+85347344 | MS.gene057548:CDS |
| CTCTTCTGTCTATTTCTACT+CGG | 0.445033 | 7.2:+85347537 | MS.gene057548:CDS |
| TAACTTTGAAGCAATTTCAA+TGG | 0.448818 | 7.2:-85347450 | None:intergenic |
| AGGAGATGCCATAATGCTTA+AGG | 0.460184 | 7.2:+85356477 | MS.gene057548:CDS |
| GCAAATGCATCACCCATTCC+AGG | 0.476737 | 7.2:+85355723 | MS.gene057548:CDS |
| GTATCAACTTTGGTTGATGT+TGG | 0.478071 | 7.2:+85355615 | MS.gene057548:CDS |
| GGCAAATCAGAGTGTTGAGT+TGG | 0.494514 | 7.2:-85347473 | None:intergenic |
| AAGAAATAGAGTACCTGGAA+TGG | 0.504208 | 7.2:-85355736 | None:intergenic |
| AGAAATAGAGTACCTGGAAT+GGG | 0.507532 | 7.2:-85355735 | None:intergenic |
| TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7.2:+85347416 | MS.gene057548:CDS |
| TGTGTCACCCTGCTTTGATA+GGG | 0.518341 | 7.2:+85347672 | MS.gene057548:CDS |
| TACCACAACCCTATCAAAGC+AGG | 0.522755 | 7.2:-85347680 | None:intergenic |
| ACCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7.2:+85347678 | MS.gene057548:CDS |
| TCTCATTGTCATCTATTTGT+GGG | 0.525324 | 7.2:-85347322 | None:intergenic |
| CAAATTGGCACCTAGTACCA+TGG | 0.530083 | 7.2:-85347354 | None:intergenic |
| ATTGCAGCATTAAGAACTGC+AGG | 0.530129 | 7.2:-85347383 | None:intergenic |
| CATTTAGGGATTGAGCATGT+TGG | 0.530865 | 7.2:+85356427 | MS.gene057548:intron |
| AAATGGAAAGGTCATTCTTG+TGG | 0.531493 | 7.2:+85356697 | MS.gene057548:CDS |
| AATTTCCATCACTCCAATAA+CGG | 0.532599 | 7.2:-85356891 | None:intergenic |
| ACAAGTCTGGATGCATTTGT+TGG | 0.533931 | 7.2:-85356746 | None:intergenic |
| AATAACTAAGTATGAGTACA+TGG | 0.535376 | 7.2:+85355491 | MS.gene057548:CDS |
| ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7.2:+85356785 | MS.gene057548:CDS |
| ACTTTGGTTGATGTTGGAGG+TGG | 0.546949 | 7.2:+85355621 | MS.gene057548:CDS |
| TATGATGAAAATAGTGATCA+TGG | 0.549928 | 7.2:+85347623 | MS.gene057548:CDS |
| TCAACTTTGGTTGATGTTGG+AGG | 0.553019 | 7.2:+85355618 | MS.gene057548:CDS |
| AATATCATGTTCATTAATGC+TGG | 0.556116 | 7.2:+85356782 | MS.gene057548:CDS |
| TTTCTCCGTTATTGGAGTGA+TGG | 0.563718 | 7.2:+85356886 | MS.gene057548:CDS |
| GGCTGTATGTCATAATTGGT+CGG | 0.567985 | 7.2:+85356625 | MS.gene057548:intron |
| TTAGGGATTGAGCATGTTGG+AGG | 0.570708 | 7.2:+85356430 | MS.gene057548:intron |
| TCTACTCGGACCAATGATGA+TGG | 0.574226 | 7.2:+85347551 | MS.gene057548:CDS |
| TAGCAAAAGTATTTACCAGA+AGG | 0.577256 | 7.2:-85347602 | None:intergenic |
| ATACGAGGGAGTATCAACTT+TGG | 0.580991 | 7.2:+85355605 | MS.gene057548:CDS |
| GATGCATTTGCAATCACTTG+AGG | 0.582930 | 7.2:-85355711 | None:intergenic |
| GGATGTGAGTTTCCACAACA+TGG | 0.598127 | 7.2:-85347301 | None:intergenic |
| AGCTTTGCCTCAAAATGGAA+AGG | 0.610192 | 7.2:+85356685 | MS.gene057548:CDS |
| CATTTGCAATCACTTGAGGA+AGG | 0.614558 | 7.2:-85355707 | None:intergenic |
| AAAATCCTTGAAATATACAA+AGG | 0.617392 | 7.2:+85355582 | MS.gene057548:CDS |
| ATAACTAAGTATGAGTACAT+GGG | 0.617696 | 7.2:+85355492 | MS.gene057548:CDS |
| TCTTGAATAGGTCAATCTCT+GGG | 0.618645 | 7.2:-85355458 | None:intergenic |
| AGCATTATGGCATCTCCTAG+TGG | 0.621592 | 7.2:-85356472 | None:intergenic |
| TTGCTAGCAAGCGTAACATA+CGG | 0.621980 | 7.2:-85347508 | None:intergenic |
| TGACAAAGTGAACCATGTTG+TGG | 0.626166 | 7.2:+85347289 | MS.gene057548:CDS |
| CAATGAGACACTCTCTGCCA+TGG | 0.626681 | 7.2:+85347337 | MS.gene057548:CDS |
| TAACTAAGTATGAGTACATG+GGG | 0.629118 | 7.2:+85355493 | MS.gene057548:CDS |
| ATGTTTGAAAGTATTCCACT+AGG | 0.637761 | 7.2:+85356457 | MS.gene057548:CDS |
| GAAATATACAAAGGATACGA+GGG | 0.648403 | 7.2:+85355591 | MS.gene057548:CDS |
| ACCACAACCCTATCAAAGCA+GGG | 0.658650 | 7.2:-85347679 | None:intergenic |
| TTGCAGCATTAAGAACTGCA+GGG | 0.670506 | 7.2:-85347382 | None:intergenic |
| TGAAATATACAAAGGATACG+AGG | 0.683728 | 7.2:+85355590 | MS.gene057548:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 85347272 | 85356922 | 85347272 | ID=MS.gene057548 |
| chr7.2 | mRNA | 85347272 | 85356922 | 85347272 | ID=MS.gene057548.t1;Parent=MS.gene057548 |
| chr7.2 | exon | 85347272 | 85347699 | 85347272 | ID=MS.gene057548.t1.exon1;Parent=MS.gene057548.t1 |
| chr7.2 | CDS | 85347272 | 85347699 | 85347272 | ID=cds.MS.gene057548.t1;Parent=MS.gene057548.t1 |
| chr7.2 | exon | 85355431 | 85355744 | 85355431 | ID=MS.gene057548.t1.exon2;Parent=MS.gene057548.t1 |
| chr7.2 | CDS | 85355431 | 85355744 | 85355431 | ID=cds.MS.gene057548.t1;Parent=MS.gene057548.t1 |
| chr7.2 | exon | 85356434 | 85356498 | 85356434 | ID=MS.gene057548.t1.exon3;Parent=MS.gene057548.t1 |
| chr7.2 | CDS | 85356434 | 85356498 | 85356434 | ID=cds.MS.gene057548.t1;Parent=MS.gene057548.t1 |
| chr7.2 | exon | 85356626 | 85356922 | 85356626 | ID=MS.gene057548.t1.exon4;Parent=MS.gene057548.t1 |
| chr7.2 | CDS | 85356626 | 85356922 | 85356626 | ID=cds.MS.gene057548.t1;Parent=MS.gene057548.t1 |
| Gene Sequence |
| Protein sequence |
