Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98449.t1 | XP_003612703.1 | 98.7 | 839 | 11 | 0 | 1 | 839 | 1 | 839 | 0.00E+00 | 1615.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98449.t1 | Q9C516 | 72.0 | 855 | 209 | 11 | 4 | 839 | 5 | 848 | 0.0e+00 | 1153.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98449.t1 | G7K9K2 | 98.7 | 839 | 11 | 0 | 1 | 839 | 1 | 839 | 0.0e+00 | 1615.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055808 | MS.gene98449 | 0.81647 | 5.44E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene98449 | 0.801327 | 9.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047695 | MS.gene98449 | PPI |
| MS.gene041157 | MS.gene98449 | PPI |
| MS.gene010419 | MS.gene98449 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98449.t1 | MTR_5g027970 | 98.689 | 839 | 11 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1727 |
| MS.gene98449.t1 | MTR_5g027970 | 99.150 | 588 | 5 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1212 |
| MS.gene98449.t1 | MTR_6g071360 | 57.658 | 888 | 306 | 20 | 2 | 839 | 11 | 878 | 0.0 | 1004 |
| MS.gene98449.t1 | MTR_5g018510 | 52.475 | 707 | 309 | 11 | 125 | 815 | 192 | 887 | 0.0 | 721 |
| MS.gene98449.t1 | MTR_5g018510 | 52.334 | 707 | 311 | 10 | 125 | 815 | 192 | 888 | 0.0 | 720 |
| MS.gene98449.t1 | MTR_8g079010 | 54.021 | 659 | 277 | 9 | 171 | 815 | 118 | 764 | 0.0 | 697 |
| MS.gene98449.t1 | MTR_1g034300 | 48.851 | 653 | 311 | 8 | 171 | 813 | 209 | 848 | 0.0 | 607 |
| MS.gene98449.t1 | MTR_1g034300 | 48.851 | 653 | 310 | 8 | 171 | 813 | 209 | 847 | 0.0 | 603 |
| MS.gene98449.t1 | MTR_1g015750 | 32.658 | 395 | 204 | 14 | 422 | 810 | 36 | 374 | 5.00e-53 | 189 |
| MS.gene98449.t1 | MTR_1g015750 | 32.658 | 395 | 204 | 14 | 422 | 810 | 44 | 382 | 7.44e-53 | 189 |
| MS.gene98449.t1 | MTR_1g015750 | 32.323 | 297 | 147 | 10 | 422 | 717 | 36 | 279 | 1.76e-35 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98449.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1147 |
| MS.gene98449.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1147 |
| MS.gene98449.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1147 |
| MS.gene98449.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1147 |
| MS.gene98449.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1147 |
| MS.gene98449.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1147 |
| MS.gene98449.t1 | AT2G23460 | 50.338 | 739 | 334 | 12 | 96 | 815 | 144 | 868 | 0.0 | 704 |
| MS.gene98449.t1 | AT4G34390 | 45.507 | 690 | 327 | 16 | 161 | 833 | 204 | 861 | 0.0 | 551 |
| MS.gene98449.t1 | AT4G34390 | 43.043 | 690 | 305 | 16 | 161 | 833 | 204 | 822 | 4.38e-166 | 503 |
| MS.gene98449.t1 | AT2G26300 | 31.401 | 414 | 217 | 14 | 408 | 810 | 16 | 373 | 1.12e-52 | 188 |
| MS.gene98449.t1 | AT2G26300 | 31.401 | 414 | 217 | 14 | 408 | 810 | 16 | 373 | 1.12e-52 | 188 |
Find 213 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAGAAGCTTCTTCTTCT+TGG | 0.179208 | 5.4:-18708456 | MS.gene98449:CDS |
| GAATCCAAGCGTCTGAAATT+AGG | 0.205731 | 5.4:-18709760 | MS.gene98449:CDS |
| AGAAAATAAGAGTTTGTTAT+AGG | 0.213096 | 5.4:-18709921 | MS.gene98449:CDS |
| TGCTTTGGATCATCTTGTTT+TGG | 0.220202 | 5.4:+18706514 | None:intergenic |
| TTGTTAAGAACTAGTATTAA+AGG | 0.230147 | 5.4:+18706444 | None:intergenic |
| ACATAAAAGAGGTTCTTAAA+TGG | 0.262325 | 5.4:-18706191 | MS.gene98449:CDS |
| TCGACAGCTTCGGAATATTT+AGG | 0.266925 | 5.4:-18710321 | MS.gene98449:CDS |
| GGGAAATGGTTTGGCTTTCA+TGG | 0.284339 | 5.4:-18706876 | MS.gene98449:CDS |
| AGTTCAAACTTGAATTTCTC+TGG | 0.305993 | 5.4:-18709022 | MS.gene98449:CDS |
| CTGTATAAGCTTCGAACTTT+GGG | 0.314678 | 5.4:+18706831 | None:intergenic |
| CTAAACCCGGATCTTTCTTC+TGG | 0.316664 | 5.4:-18710135 | MS.gene98449:CDS |
| AGGTTCTCCTGCTCACATTA+TGG | 0.317177 | 5.4:-18708046 | MS.gene98449:CDS |
| GTCCACGTGATACTCACTTT+TGG | 0.317550 | 5.4:-18708744 | MS.gene98449:CDS |
| TTGCCGATGTCACGTATTTC+CGG | 0.319193 | 5.4:-18710225 | MS.gene98449:CDS |
| CTTCTTCTTCTTGGAATTCA+AGG | 0.319947 | 5.4:-18708447 | MS.gene98449:CDS |
| CTTCTTGGAATTCAAGGGTC+TGG | 0.324531 | 5.4:-18708441 | MS.gene98449:CDS |
| ACGACAAAGAATCTGGTCTA+TGG | 0.324545 | 5.4:-18709537 | MS.gene98449:CDS |
| GCCTTCAGCTTCACCGGCTT+CGG | 0.330535 | 5.4:-18710109 | MS.gene98449:CDS |
| AGAATATAAGAGGAAACATT+TGG | 0.337123 | 5.4:-18708684 | MS.gene98449:CDS |
| AGACGCTTGGATTCGTCAAT+AGG | 0.342855 | 5.4:+18709769 | None:intergenic |
| CTCCTGGACATTATTGCCAC+TGG | 0.346563 | 5.4:-18707605 | MS.gene98449:CDS |
| CAATATGCTTACTTGGTCAT+TGG | 0.347638 | 5.4:+18706785 | None:intergenic |
| GGTTGTGAAGCCGGCGTATC+CGG | 0.350381 | 5.4:-18709977 | MS.gene98449:CDS |
| ATCATAATAGAGGAGATAAT+TGG | 0.353939 | 5.4:-18710413 | MS.gene98449:CDS |
| GTTACACATTTGCGCCCTTC+AGG | 0.359236 | 5.4:+18709805 | None:intergenic |
| TCTGTATAAGCTTCGAACTT+TGG | 0.372490 | 5.4:+18706830 | None:intergenic |
| CAGCTGTGTGCTCAGGGCGA+TGG | 0.385325 | 5.4:-18709836 | MS.gene98449:CDS |
| AATCCAAGCGTCTGAAATTA+GGG | 0.394591 | 5.4:-18709759 | MS.gene98449:CDS |
| ATAACTGATCGTAGTCGCTT+AGG | 0.395862 | 5.4:+18706574 | None:intergenic |
| ACATCTAGAGGCTCAACTTT+CGG | 0.399792 | 5.4:+18710276 | None:intergenic |
| TTTGTTATAGGTGTGGTAAA+GGG | 0.404012 | 5.4:-18709909 | MS.gene98449:CDS |
| TCACGTATTTCCGGTGTGAC+GGG | 0.404061 | 5.4:-18710216 | MS.gene98449:CDS |
| AGCTGAAGCCTGGTAGATAT+TGG | 0.404152 | 5.4:-18709561 | MS.gene98449:CDS |
| GAGAAAGATGAAAATTACTA+TGG | 0.405466 | 5.4:-18706162 | MS.gene98449:CDS |
| AATCATAGTCCAAGGGTGTC+TGG | 0.406251 | 5.4:-18710186 | MS.gene98449:CDS |
| GGTTACTCAGGGAAATGGTT+TGG | 0.408020 | 5.4:-18706885 | MS.gene98449:CDS |
| GCATATTCACGTGTCGCTGC+AGG | 0.408474 | 5.4:+18707563 | None:intergenic |
| ATCTCAGGTACCAACTCATA+AGG | 0.412874 | 5.4:-18706677 | MS.gene98449:intron |
| AAGAAGTACTCTGCAACATC+TGG | 0.418402 | 5.4:+18707464 | None:intergenic |
| ATTGCAGCAGCTGTGTGCTC+AGG | 0.424032 | 5.4:-18709843 | MS.gene98449:CDS |
| TTTCCCTAATTTCAGACGCT+TGG | 0.425388 | 5.4:+18709756 | None:intergenic |
| AGGAGATAATTGGAGGGAAG+TGG | 0.428042 | 5.4:-18710403 | MS.gene98449:CDS |
| CTTCAGCTTGCGTGGAGGTA+AGG | 0.430576 | 5.4:+18709576 | None:intergenic |
| CATAAAAGAGGTTCTTAAAT+GGG | 0.433650 | 5.4:-18706190 | MS.gene98449:CDS |
| GAAGGTCAAAAGAATATAAG+AGG | 0.437475 | 5.4:-18708694 | MS.gene98449:CDS |
| TTCCAGTGATGGATGCATAA+AGG | 0.439331 | 5.4:+18706277 | None:intergenic |
| TATTGGTACGACAAAGAATC+TGG | 0.439746 | 5.4:-18709544 | MS.gene98449:CDS |
| AGCTGTGTGCTCAGGGCGAT+GGG | 0.439917 | 5.4:-18709835 | MS.gene98449:CDS |
| GTTGTTGTCGTGTGCGCGCA+CGG | 0.442738 | 5.4:+18706350 | None:intergenic |
| AGTAAGTCTTCCATCTCATC+AGG | 0.442958 | 5.4:+18709607 | None:intergenic |
| CTTCCATCTCATCAGGTTTG+AGG | 0.443955 | 5.4:+18709614 | None:intergenic |
| GAATATAAGAGGAAACATTT+GGG | 0.444612 | 5.4:-18708683 | MS.gene98449:CDS |
| TCCTGGACATTATTGCCACT+GGG | 0.445233 | 5.4:-18707604 | MS.gene98449:CDS |
| GTTCCGCTGCCATTGCTGTC+TGG | 0.451485 | 5.4:+18706543 | None:intergenic |
| TAACAAATACGACGTCTTCG+AGG | 0.451533 | 5.4:-18706427 | MS.gene98449:CDS |
| GAAGGGGTTACTCAGGGAAA+TGG | 0.456344 | 5.4:-18706890 | MS.gene98449:CDS |
| GTTTGTTATAGGTGTGGTAA+AGG | 0.458659 | 5.4:-18709910 | MS.gene98449:CDS |
| ATCCCGACTGTTGAGTCCTC+TGG | 0.461629 | 5.4:-18709719 | MS.gene98449:CDS |
| ACGGTATTAAAAGTTACAAC+AGG | 0.462099 | 5.4:+18710030 | None:intergenic |
| GGTGGTGGAGGTTGTGAAGC+CGG | 0.462707 | 5.4:-18709986 | MS.gene98449:CDS |
| TTTGAACTAATGATTCTGTC+AGG | 0.463062 | 5.4:+18709037 | None:intergenic |
| TTCGGTACTTCATAAGAAAC+CGG | 0.463768 | 5.4:+18710294 | None:intergenic |
| TAACTGATCGTAGTCGCTTA+GGG | 0.465110 | 5.4:+18706575 | None:intergenic |
| AACTCGAATTGAGGGTACTC+AGG | 0.466428 | 5.4:-18708934 | MS.gene98449:CDS |
| GCAACCTTCGCTCATGCCCT+TGG | 0.468837 | 5.4:+18706647 | None:intergenic |
| GACCTTTATGCATCCATCAC+TGG | 0.471820 | 5.4:-18706279 | MS.gene98449:CDS |
| TTGAAGGTCTCTTGTATCGC+TGG | 0.475831 | 5.4:+18707512 | None:intergenic |
| TGGCATTCACCCTTATGAGT+TGG | 0.476657 | 5.4:+18706667 | None:intergenic |
| TCTTGATTACTCGACAGCTT+CGG | 0.477356 | 5.4:-18710331 | MS.gene98449:CDS |
| GTTCAAACTTGAATTTCTCT+GGG | 0.480058 | 5.4:-18709021 | MS.gene98449:CDS |
| TCTGAACTTCCAGACACCCT+TGG | 0.482123 | 5.4:+18710177 | None:intergenic |
| CGACAAAGAATCTGGTCTAT+GGG | 0.487042 | 5.4:-18709536 | MS.gene98449:CDS |
| GGCGAACCAGAAGAAAGATC+CGG | 0.487194 | 5.4:+18710129 | None:intergenic |
| GACACCCTTGGACTATGATT+AGG | 0.488171 | 5.4:+18710189 | None:intergenic |
| GATGAGATGGAAGACTTACT+TGG | 0.489124 | 5.4:-18709604 | MS.gene98449:CDS |
| TTCTCTCTACCCTATCCTCA+TGG | 0.490716 | 5.4:-18708549 | MS.gene98449:CDS |
| GACTCAGAGGAAAGAGGTGG+TGG | 0.491543 | 5.4:-18710001 | MS.gene98449:CDS |
| AAGCTTGATGTGCTAGTGAT+TGG | 0.491832 | 5.4:+18706328 | None:intergenic |
| GAGGCTGTTTCTAGAATGAA+TGG | 0.497615 | 5.4:-18708072 | MS.gene98449:CDS |
| TTCACAACTCCAACGTACTC+CGG | 0.498553 | 5.4:+18709958 | None:intergenic |
| GTCACGTATTTCCGGTGTGA+CGG | 0.499022 | 5.4:-18710217 | MS.gene98449:CDS |
| AACACTGAGGTTTACATCAA+TGG | 0.499687 | 5.4:-18708971 | MS.gene98449:CDS |
| TTCGGAATATTTAGGTCCAC+CGG | 0.500662 | 5.4:-18710313 | MS.gene98449:CDS |
| GAACCATTCACAAGCGTTGA+GGG | 0.500930 | 5.4:+18706386 | None:intergenic |
| AAAGATATGGATCATAATAG+AGG | 0.501836 | 5.4:-18710423 | None:intergenic |
| TCAAGATTAGAAGCGTCATC+AGG | 0.502867 | 5.4:+18710348 | None:intergenic |
| TTGCAGAGTACTTCTTAAGC+CGG | 0.504206 | 5.4:-18707457 | MS.gene98449:CDS |
| ATATGCAGAAGGGGTTACTC+AGG | 0.507616 | 5.4:-18706897 | MS.gene98449:CDS |
| GAAAGCGGAGAAAGAATGTT+CGG | 0.508911 | 5.4:-18709680 | MS.gene98449:CDS |
| CCGTTGACACTCAACTGCTC+TGG | 0.510346 | 5.4:+18709643 | None:intergenic |
| TTCAGCTTGCGTGGAGGTAA+GGG | 0.513690 | 5.4:+18709577 | None:intergenic |
| TTCGAATGTTGCTTCTAAGC+CGG | 0.514313 | 5.4:-18710076 | MS.gene98449:CDS |
| TTCTTCTTCTTGGAATTCAA+GGG | 0.514846 | 5.4:-18708446 | MS.gene98449:CDS |
| ATGAGGCTGTCCATGAGGAT+AGG | 0.516805 | 5.4:+18708539 | None:intergenic |
| CCTGCTCACATTATGGAAGC+TGG | 0.518201 | 5.4:-18708039 | MS.gene98449:intron |
| TTGTTGTCGTGTGCGCGCAC+GGG | 0.518712 | 5.4:+18706351 | None:intergenic |
| CGCAAATGTGTAACATGCAT+CGG | 0.521554 | 5.4:-18709796 | MS.gene98449:CDS |
| TGGTTCGCCTTCAGCTTCAC+CGG | 0.523608 | 5.4:-18710115 | MS.gene98449:CDS |
| TATCCCTCAACGCTTGTGAA+TGG | 0.523776 | 5.4:-18706389 | MS.gene98449:CDS |
| ATATCTGTAATTGAATCCTC+AGG | 0.524085 | 5.4:+18706135 | None:intergenic |
| CCTCCACGCAAGCTGAAGCC+TGG | 0.524656 | 5.4:-18709571 | MS.gene98449:CDS |
| TTAGCACTGATGCTAGTAAC+GGG | 0.524938 | 5.4:-18708994 | MS.gene98449:CDS |
| GAAGGATTATGAACCGAAGC+CGG | 0.527127 | 5.4:+18710096 | None:intergenic |
| CTCTTCGCCTCATTAATCAC+CGG | 0.527445 | 5.4:+18710057 | None:intergenic |
| TGAAATTAGGGAAATATTCG+AGG | 0.529424 | 5.4:-18709747 | MS.gene98449:CDS |
| TCTCAGGTACCAACTCATAA+GGG | 0.529434 | 5.4:-18706676 | MS.gene98449:intron |
| AATCTTTATTTAGGTAGCAA+TGG | 0.529627 | 5.4:-18707695 | MS.gene98449:intron |
| CCCCAGTGGCAATAATGTCC+AGG | 0.529739 | 5.4:+18707603 | None:intergenic |
| GAAATACGTGACATCGGCAA+AGG | 0.530158 | 5.4:+18710228 | None:intergenic |
| GTCTGGAAGTTCAGAATCTG+TGG | 0.530261 | 5.4:-18710169 | MS.gene98449:CDS |
| ATAGGTGTGGTAAAGGGAAG+TGG | 0.530493 | 5.4:-18709903 | MS.gene98449:CDS |
| TTCCACACTTCTTCGACTAG+TGG | 0.534470 | 5.4:+18707539 | None:intergenic |
| AAATACGTGACATCGGCAAA+GGG | 0.535014 | 5.4:+18710229 | None:intergenic |
| CGACTATGAACCTTCTGAAA+GGG | 0.535573 | 5.4:-18706927 | MS.gene98449:CDS |
| ATAATTTGCTTAACTTCCAG+AGG | 0.535842 | 5.4:+18709703 | None:intergenic |
| TGAGGCTGTCCATGAGGATA+GGG | 0.536471 | 5.4:+18708540 | None:intergenic |
| AACTAGCACTATGTTTAAGC+AGG | 0.537997 | 5.4:-18708418 | MS.gene98449:intron |
| TTGTTGCACAAGTTAGGGCA+AGG | 0.539883 | 5.4:-18706245 | MS.gene98449:CDS |
| AGCATTCAAGTACATAAAAG+AGG | 0.541232 | 5.4:-18706202 | MS.gene98449:CDS |
| CAAATTTACTGATCAAGAGC+TGG | 0.541738 | 5.4:-18708175 | MS.gene98449:CDS |
| AGGATAGGGTAGAGAGAAGA+GGG | 0.541964 | 5.4:+18708554 | None:intergenic |
| GATTACAAAACTCGAATTGA+GGG | 0.543174 | 5.4:-18708942 | MS.gene98449:CDS |
| TCTCCTCAAACCTGATGAGA+TGG | 0.546849 | 5.4:-18709617 | MS.gene98449:CDS |
| CCAGCTTCCATAATGTGAGC+AGG | 0.547580 | 5.4:+18708039 | None:intergenic |
| TATCCTCATGGACAGCCTCA+TGG | 0.548421 | 5.4:-18708537 | MS.gene98449:CDS |
| ATAATAGAGGAGATAATTGG+AGG | 0.553110 | 5.4:-18710410 | MS.gene98449:CDS |
| TGCAGAGTACTTCTTAAGCC+GGG | 0.553139 | 5.4:-18707456 | MS.gene98449:intron |
| TTGCAGCAGCTGTGTGCTCA+GGG | 0.553376 | 5.4:-18709842 | MS.gene98449:CDS |
| TTGTCGTACCAATATCTACC+AGG | 0.553776 | 5.4:+18709553 | None:intergenic |
| TTCTAAGCCGGTGATTAATG+AGG | 0.555132 | 5.4:-18710064 | MS.gene98449:CDS |
| AAGAGGAAACATTTGGGAGA+AGG | 0.555224 | 5.4:-18708677 | MS.gene98449:intron |
| CTACCAGGCTTCAGCTTGCG+TGG | 0.558966 | 5.4:+18709568 | None:intergenic |
| CCAGAGCAGTTGAGTGTCAA+CGG | 0.559543 | 5.4:-18709643 | MS.gene98449:CDS |
| GGTCTCCTAATCATAGTCCA+AGG | 0.562082 | 5.4:-18710194 | MS.gene98449:CDS |
| GTGAAGAAGATGCTTCCGCC+GGG | 0.565713 | 5.4:-18710381 | MS.gene98449:CDS |
| TTGGTTGCAACTGAGCATCA+AGG | 0.566584 | 5.4:+18706804 | None:intergenic |
| CGATGGGATCAATGCCTGAA+GGG | 0.567041 | 5.4:-18709819 | MS.gene98449:CDS |
| AAAGGAGTGTCTTTGAAACA+AGG | 0.567459 | 5.4:+18706462 | None:intergenic |
| GCTTGGATTCGTCAATAGGC+TGG | 0.567856 | 5.4:+18709773 | None:intergenic |
| ATAAGAGTTTGTTATAGGTG+TGG | 0.569468 | 5.4:-18709916 | MS.gene98449:CDS |
| TAGGTGTGGTAAAGGGAAGT+GGG | 0.572746 | 5.4:-18709902 | MS.gene98449:CDS |
| CTTCCAGAGGACTCAACAGT+CGG | 0.574189 | 5.4:+18709716 | None:intergenic |
| TCAGAGGAAAGAGGTGGTGG+AGG | 0.574303 | 5.4:-18709998 | MS.gene98449:CDS |
| ACTCATAAGGGTGAATGCCA+AGG | 0.574599 | 5.4:-18706664 | MS.gene98449:CDS |
| AGATTACAAAACTCGAATTG+AGG | 0.575057 | 5.4:-18708943 | MS.gene98449:CDS |
| GGTGAAGAAGATGCTTCCGC+CGG | 0.575635 | 5.4:-18710382 | MS.gene98449:CDS |
| GGTTTCTGTGTTACTAAACC+CGG | 0.577540 | 5.4:-18710148 | MS.gene98449:CDS |
| CCTCTGAACTTCACATCTAG+AGG | 0.577758 | 5.4:+18710264 | None:intergenic |
| GCGAACCAGAAGAAAGATCC+GGG | 0.578672 | 5.4:+18710130 | None:intergenic |
| TTCCAGAGGACTCAACAGTC+GGG | 0.579300 | 5.4:+18709717 | None:intergenic |
| TGAACCATTCACAAGCGTTG+AGG | 0.581430 | 5.4:+18706385 | None:intergenic |
| TATAGTATGTCCCTTTCAGA+AGG | 0.581848 | 5.4:+18706917 | None:intergenic |
| TGTTGCACAAGTTAGGGCAA+GGG | 0.583819 | 5.4:-18706244 | MS.gene98449:CDS |
| TAATAGAGGAGATAATTGGA+GGG | 0.587246 | 5.4:-18710409 | MS.gene98449:CDS |
| ACTCGAATTGAGGGTACTCA+GGG | 0.588057 | 5.4:-18708933 | MS.gene98449:intron |
| GCGATGGGATCAATGCCTGA+AGG | 0.590546 | 5.4:-18709820 | MS.gene98449:CDS |
| TTCAAGATATTTAGGAACTG+TGG | 0.591645 | 5.4:+18708488 | None:intergenic |
| AGAATCTGGTCTATGGGGAA+AGG | 0.592126 | 5.4:-18709530 | MS.gene98449:intron |
| GGCTTAGAAGCAACATTCGA+AGG | 0.592724 | 5.4:+18710078 | None:intergenic |
| CATATTCACGTGTCGCTGCA+GGG | 0.596003 | 5.4:+18707564 | None:intergenic |
| GAGGATAGGGTAGAGAGAAG+AGG | 0.598813 | 5.4:+18708553 | None:intergenic |
| TGAAAGGACTCAGAGGAAAG+AGG | 0.599318 | 5.4:-18710007 | MS.gene98449:CDS |
| CACCACTAGTCGAAGAAGTG+TGG | 0.599546 | 5.4:-18707541 | MS.gene98449:CDS |
| AAGGAGTGTCTTTGAAACAA+GGG | 0.599710 | 5.4:+18706463 | None:intergenic |
| CCTCTAGATGTGAAGTTCAG+AGG | 0.601302 | 5.4:-18710264 | MS.gene98449:CDS |
| CACGTATTTCCGGTGTGACG+GGG | 0.601482 | 5.4:-18710215 | MS.gene98449:CDS |
| CTTAGCACTGATGCTAGTAA+CGG | 0.601560 | 5.4:-18708995 | MS.gene98449:CDS |
| ACGACTATGAACCTTCTGAA+AGG | 0.605948 | 5.4:-18706928 | MS.gene98449:CDS |
| GTTTGAAGATGTTAGAGCAG+TGG | 0.606106 | 5.4:-18706610 | MS.gene98449:CDS |
| AGTACTCTGCAACATCTGGA+AGG | 0.606602 | 5.4:+18707468 | None:intergenic |
| GCATGAGCGAAGGTTGCAAG+TGG | 0.608881 | 5.4:-18706641 | MS.gene98449:CDS |
| CTCATAAGGGTGAATGCCAA+GGG | 0.609756 | 5.4:-18706663 | MS.gene98449:CDS |
| AATGCCAAGGGCATGAGCGA+AGG | 0.610410 | 5.4:-18706651 | MS.gene98449:CDS |
| TTTCCTCTGAGTCCTTTCAA+CGG | 0.611134 | 5.4:+18710011 | None:intergenic |
| GGGACATACTATATGCAGAA+GGG | 0.611389 | 5.4:-18706907 | MS.gene98449:CDS |
| GCATCTATTCTCTCAACCCA+AGG | 0.613969 | 5.4:-18707649 | MS.gene98449:CDS |
| ACCGAAGCCGGTGAAGCTGA+AGG | 0.614449 | 5.4:+18710108 | None:intergenic |
| GGACATACTATATGCAGAAG+GGG | 0.618757 | 5.4:-18706906 | MS.gene98449:CDS |
| GTCTCCTAATCATAGTCCAA+GGG | 0.620517 | 5.4:-18710193 | MS.gene98449:CDS |
| AGTTAAGCAAATTATGAAAG+CGG | 0.624149 | 5.4:-18709695 | MS.gene98449:CDS |
| AAACAAGATGATCCAAAGCA+AGG | 0.629557 | 5.4:-18706511 | MS.gene98449:CDS |
| GCACCAGACAGCAATGGCAG+CGG | 0.631434 | 5.4:-18706546 | MS.gene98449:CDS |
| GAAATTAGGGAAATATTCGA+GGG | 0.635307 | 5.4:-18709746 | MS.gene98449:CDS |
| AGGGACATACTATATGCAGA+AGG | 0.636022 | 5.4:-18706908 | MS.gene98449:CDS |
| CCTGGACATTATTGCCACTG+GGG | 0.637572 | 5.4:-18707603 | MS.gene98449:CDS |
| GACAAAGAATCTGGTCTATG+GGG | 0.638895 | 5.4:-18709535 | MS.gene98449:CDS |
| TGTCTTGCACCAGACAGCAA+TGG | 0.639385 | 5.4:-18706552 | MS.gene98449:CDS |
| ATTTACTGATCAAGAGCTGG+AGG | 0.639867 | 5.4:-18708172 | MS.gene98449:CDS |
| TTATGATGATGGTCGTTACG+AGG | 0.640902 | 5.4:-18708719 | MS.gene98449:CDS |
| GTTTCTAGAATGAATGGACA+AGG | 0.641804 | 5.4:-18708066 | MS.gene98449:CDS |
| GATGGTCGTTACGAGGAGGA+AGG | 0.643902 | 5.4:-18708712 | MS.gene98449:CDS |
| TCTGTAATTGAATCCTCAGG+TGG | 0.650948 | 5.4:+18706138 | None:intergenic |
| CGGTGATTAATGAGGCGAAG+AGG | 0.653038 | 5.4:-18710056 | MS.gene98449:CDS |
| TCATCAGGAACAGAAGCACC+CGG | 0.654089 | 5.4:+18710363 | None:intergenic |
| TGATGATGGTCGTTACGAGG+AGG | 0.655963 | 5.4:-18708716 | MS.gene98449:CDS |
| ATTAGGAGACCCCGTCACAC+CGG | 0.657996 | 5.4:+18710206 | None:intergenic |
| CCGGCGTATCCGGAGTACGT+TGG | 0.658309 | 5.4:-18709967 | MS.gene98449:CDS |
| TATGCAGAAGGGGTTACTCA+GGG | 0.660136 | 5.4:-18706896 | MS.gene98449:CDS |
| CCAGGCTTCAGCTTGCGTGG+AGG | 0.664286 | 5.4:+18709571 | None:intergenic |
| GGTACTTCATAAGAAACCGG+TGG | 0.665395 | 5.4:+18710297 | None:intergenic |
| GATCCATGAGGCTGTCCATG+AGG | 0.673737 | 5.4:+18708534 | None:intergenic |
| GCCTCGTCTCTTGATCCATG+AGG | 0.673748 | 5.4:+18708522 | None:intergenic |
| CATGAGCGAAGGTTGCAAGT+GGG | 0.675143 | 5.4:-18706640 | MS.gene98449:CDS |
| CCAACGTACTCCGGATACGC+CGG | 0.685156 | 5.4:+18709967 | None:intergenic |
| ACCCAAAAGTGAGTATCACG+TGG | 0.685386 | 5.4:+18708742 | None:intergenic |
| ACACCGGAAATACGTGACAT+CGG | 0.696010 | 5.4:+18710222 | None:intergenic |
| GCCTCATGGATCAAGAGACG+AGG | 0.704715 | 5.4:-18708523 | MS.gene98449:CDS |
| AAATTACTATGGTCCACCTG+AGG | 0.707677 | 5.4:-18706151 | MS.gene98449:CDS |
| AAGGACTCAGAGGAAAGAGG+TGG | 0.708006 | 5.4:-18710004 | MS.gene98449:CDS |
| ATACCGTTGAAAGGACTCAG+AGG | 0.712232 | 5.4:-18710014 | MS.gene98449:CDS |
| TGCTAGTAACGGGAACACTG+AGG | 0.725800 | 5.4:-18708984 | MS.gene98449:CDS |
| GAATGCATCTAAATCCCCAG+TGG | 0.748472 | 5.4:+18707589 | None:intergenic |
| TCAGGAACAGAAGCACCCGG+CGG | 0.793880 | 5.4:+18710366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTGAAAATTCAAAGAAAA+AGG | + | chr5.4:18707743-18707762 | None:intergenic | 20.0% |
| !! | AATTTGTAGATGCTATAATT+AGG | - | chr5.4:18709184-18709203 | MS.gene98449:intron | 20.0% |
| !! | ATTTGTAGATGCTATAATTA+GGG | - | chr5.4:18709185-18709204 | MS.gene98449:intron | 20.0% |
| !! | CCTAAATAAAGATTGAAATA+CGG | + | chr5.4:18708820-18708839 | None:intergenic | 20.0% |
| !! | GCTATGTATCATAATATAAA+CGG | - | chr5.4:18709459-18709478 | MS.gene98449:intron | 20.0% |
| !! | GTTGTTAATATGTACTTAAT+GGG | + | chr5.4:18709813-18709832 | None:intergenic | 20.0% |
| !! | TAATCCGAATATTAAAATAG+TGG | + | chr5.4:18707674-18707693 | None:intergenic | 20.0% |
| !! | TCCTTATCATTATCATATTT+CGG | - | chr5.4:18707694-18707713 | MS.gene98449:intron | 20.0% |
| !! | TGTTGTTAATATGTACTTAA+TGG | + | chr5.4:18709814-18709833 | None:intergenic | 20.0% |
| !! | TTGTTAAGAACTAGTATTAA+AGG | + | chr5.4:18710080-18710099 | None:intergenic | 20.0% |
| !!! | AGAAAATAAGAGTTTGTTAT+AGG | - | chr5.4:18706600-18706619 | MS.gene98449:CDS | 20.0% |
| !!! | ATAAGTCAAACTTATGATTT+TGG | + | chr5.4:18707122-18707141 | None:intergenic | 20.0% |
| !!! | TATGATTTTGGAGATAAAAT+TGG | + | chr5.4:18707110-18707129 | None:intergenic | 20.0% |
| !!! | TTTGCCACTATTTTAATATT+CGG | - | chr5.4:18707667-18707686 | MS.gene98449:CDS | 20.0% |
| !!! | TTTTTCTGTTCAAGATATTT+AGG | + | chr5.4:18708044-18708063 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTGAATTTTCAGT+TGG | - | chr5.4:18707742-18707761 | MS.gene98449:intron | 20.0% |
| ! | AATGAAAGCAGAAATATTCT+CGG | + | chr5.4:18707038-18707057 | None:intergenic | 25.0% |
| ! | ACATAAAAGAGGTTCTTAAA+TGG | - | chr5.4:18710330-18710349 | MS.gene98449:CDS | 25.0% |
| ! | ACCGAATCTATATTCATAAA+CGG | + | chr5.4:18708720-18708739 | None:intergenic | 25.0% |
| ! | AGAATATAAGAGGAAACATT+TGG | - | chr5.4:18707837-18707856 | MS.gene98449:intron | 25.0% |
| ! | AGATATTCAATATGCTTACT+TGG | + | chr5.4:18709746-18709765 | None:intergenic | 25.0% |
| ! | AGTAAGCATATTGAATATCT+AGG | - | chr5.4:18709746-18709765 | MS.gene98449:CDS | 25.0% |
| ! | AGTTAAGCAAATTATGAAAG+CGG | - | chr5.4:18706826-18706845 | MS.gene98449:CDS | 25.0% |
| ! | ATCATAATAGAGGAGATAAT+TGG | - | chr5.4:18706108-18706127 | MS.gene98449:CDS | 25.0% |
| ! | CATAAAAGAGGTTCTTAAAT+GGG | - | chr5.4:18710331-18710350 | MS.gene98449:CDS | 25.0% |
| ! | CTAGATAATGTAACATCATT+TGG | - | chr5.4:18708536-18708555 | MS.gene98449:CDS | 25.0% |
| ! | GAATATAAGAGGAAACATTT+GGG | - | chr5.4:18707838-18707857 | MS.gene98449:intron | 25.0% |
| ! | GAGAAAGATGAAAATTACTA+TGG | - | chr5.4:18710359-18710378 | MS.gene98449:CDS | 25.0% |
| ! | GTATTCACTTAAATACTTGT+AGG | - | chr5.4:18707866-18707885 | MS.gene98449:intron | 25.0% |
| ! | TAATTAGGGATTGTTTAGAT+TGG | - | chr5.4:18709199-18709218 | MS.gene98449:intron | 25.0% |
| ! | TATAACATGATTCTCTTATG+TGG | - | chr5.4:18708281-18708300 | MS.gene98449:intron | 25.0% |
| ! | TCAATGTTCAGAATGAATAA+TGG | + | chr5.4:18709164-18709183 | None:intergenic | 25.0% |
| ! | TCCGTTTATGAATATAGATT+CGG | - | chr5.4:18708716-18708735 | MS.gene98449:CDS | 25.0% |
| ! | TGATTATATAAGCAATTACC+CGG | + | chr5.4:18709086-18709105 | None:intergenic | 25.0% |
| ! | TGTACTTAATGGGAAAAAAA+TGG | + | chr5.4:18709803-18709822 | None:intergenic | 25.0% |
| !! | AATCTTTATTTAGGTAGCAA+TGG | - | chr5.4:18708826-18708845 | MS.gene98449:intron | 25.0% |
| !! | CCGTATTTCAATCTTTATTT+AGG | - | chr5.4:18708817-18708836 | MS.gene98449:intron | 25.0% |
| !! | GGAATATTATGTTTTCAGTT+GGG | - | chr5.4:18707069-18707088 | MS.gene98449:intron | 25.0% |
| !! | TAACTTTTAATACCGTTGAA+AGG | - | chr5.4:18706498-18706517 | MS.gene98449:CDS | 25.0% |
| !! | TATCTTAGCATTTTACTTGA+CGG | - | chr5.4:18708407-18708426 | MS.gene98449:intron | 25.0% |
| !! | TGGAATATTATGTTTTCAGT+TGG | - | chr5.4:18707068-18707087 | MS.gene98449:intron | 25.0% |
| !! | TTTATGAATATAGATTCGGT+CGG | - | chr5.4:18708720-18708739 | MS.gene98449:CDS | 25.0% |
| AAAAAGTTTCTTTCCAGTGA+TGG | + | chr5.4:18710258-18710277 | None:intergenic | 30.0% | |
| AAATACGGTAAAACACCAAA+AGG | + | chr5.4:18708805-18708824 | None:intergenic | 30.0% | |
| ACGGTATTAAAAGTTACAAC+AGG | + | chr5.4:18706494-18706513 | None:intergenic | 30.0% | |
| AGATTACAAAACTCGAATTG+AGG | - | chr5.4:18707578-18707597 | MS.gene98449:CDS | 30.0% | |
| AGCATTCAAGTACATAAAAG+AGG | - | chr5.4:18710319-18710338 | MS.gene98449:CDS | 30.0% | |
| AGTTCAAACTTGAATTTCTC+TGG | - | chr5.4:18707499-18707518 | MS.gene98449:CDS | 30.0% | |
| ATAATAGAGGAGATAATTGG+AGG | - | chr5.4:18706111-18706130 | MS.gene98449:CDS | 30.0% | |
| ATATCTGTAATTGAATCCTC+AGG | + | chr5.4:18710389-18710408 | None:intergenic | 30.0% | |
| ATGTTTCGAATGCATGTTTA+GGG | + | chr5.4:18708640-18708659 | None:intergenic | 30.0% | |
| CAAACATGACCTAAGTTTAT+TGG | - | chr5.4:18709437-18709456 | MS.gene98449:intron | 30.0% | |
| CAACATTTCTTTGATATCTC+AGG | - | chr5.4:18709829-18709848 | MS.gene98449:CDS | 30.0% | |
| CAATAAACTTAGGTCATGTT+TGG | + | chr5.4:18709439-18709458 | None:intergenic | 30.0% | |
| CCAGAGTCTTCTTAAAATTA+CGG | - | chr5.4:18709115-18709134 | MS.gene98449:intron | 30.0% | |
| CGTTATTCATTTGATAGGAA+GGG | - | chr5.4:18707455-18707474 | MS.gene98449:intron | 30.0% | |
| GAAATTAGGGAAATATTCGA+GGG | - | chr5.4:18706775-18706794 | MS.gene98449:intron | 30.0% | |
| GAAGGTCAAAAGAATATAAG+AGG | - | chr5.4:18707827-18707846 | MS.gene98449:intron | 30.0% | |
| GATACATAGCCAATAAACTT+AGG | + | chr5.4:18709449-18709468 | None:intergenic | 30.0% | |
| GATTACAAAACTCGAATTGA+GGG | - | chr5.4:18707579-18707598 | MS.gene98449:CDS | 30.0% | |
| GTTATTCATTTGATAGGAAG+GGG | - | chr5.4:18707456-18707475 | MS.gene98449:intron | 30.0% | |
| GTTCAAACTTGAATTTCTCT+GGG | - | chr5.4:18707500-18707519 | MS.gene98449:CDS | 30.0% | |
| TAATAGAGGAGATAATTGGA+GGG | - | chr5.4:18706112-18706131 | MS.gene98449:CDS | 30.0% | |
| TAGTGGCAAAAAAACTCTAT+TGG | + | chr5.4:18707657-18707676 | None:intergenic | 30.0% | |
| TCATCATCCTGTAATGATAT+CGG | - | chr5.4:18708776-18708795 | MS.gene98449:intron | 30.0% | |
| TCGTTATTCATTTGATAGGA+AGG | - | chr5.4:18707454-18707473 | MS.gene98449:intron | 30.0% | |
| TCTGTCGTTATTCATTTGAT+AGG | - | chr5.4:18707450-18707469 | MS.gene98449:intron | 30.0% | |
| TGAAATTAGGGAAATATTCG+AGG | - | chr5.4:18706774-18706793 | MS.gene98449:intron | 30.0% | |
| TTAATGGGAAAAAAATGGTG+TGG | + | chr5.4:18709798-18709817 | None:intergenic | 30.0% | |
| TTCAAGATATTTAGGAACTG+TGG | + | chr5.4:18708036-18708055 | None:intergenic | 30.0% | |
| TTCTTCTTCTTGGAATTCAA+GGG | - | chr5.4:18708075-18708094 | MS.gene98449:CDS | 30.0% | |
| TTTATTTGTAATCAGAGAGC+AGG | - | chr5.4:18707419-18707438 | MS.gene98449:intron | 30.0% | |
| TTTGAACTAATGATTCTGTC+AGG | + | chr5.4:18707487-18707506 | None:intergenic | 30.0% | |
| TTTGTTCCCGTACAAAAATT+TGG | + | chr5.4:18708330-18708349 | None:intergenic | 30.0% | |
| ! | AACTTTTTGTTGCACAAGTT+AGG | - | chr5.4:18710270-18710289 | MS.gene98449:CDS | 30.0% |
| ! | ACTGTTTTCATTTTCAGCTT+TGG | - | chr5.4:18709498-18709517 | MS.gene98449:intron | 30.0% |
| ! | ACTTTTTGTTGCACAAGTTA+GGG | - | chr5.4:18710271-18710290 | MS.gene98449:CDS | 30.0% |
| ! | CTGTTTTCATTTTCAGCTTT+GGG | - | chr5.4:18709499-18709518 | MS.gene98449:intron | 30.0% |
| ! | GCCGAAATATGATAATGATA+AGG | + | chr5.4:18707698-18707717 | None:intergenic | 30.0% |
| ! | GGTGTTAATGTTAATTTTGC+AGG | - | chr5.4:18708741-18708760 | MS.gene98449:CDS | 30.0% |
| ! | TAATGATATCGGAATCCTTT+TGG | - | chr5.4:18708787-18708806 | MS.gene98449:intron | 30.0% |
| ! | TGTTTTCATTTTCAGCTTTG+GGG | - | chr5.4:18709500-18709519 | MS.gene98449:intron | 30.0% |
| ! | TTACGAATTTTTCTCATGAC+AGG | - | chr5.4:18707923-18707942 | MS.gene98449:intron | 30.0% |
| ! | TTTGTTATAGGTGTGGTAAA+GGG | - | chr5.4:18706612-18706631 | MS.gene98449:CDS | 30.0% |
| !! | ATAAGAGTTTGTTATAGGTG+TGG | - | chr5.4:18706605-18706624 | MS.gene98449:CDS | 30.0% |
| !! | ATAATTTGCTTAACTTCCAG+AGG | + | chr5.4:18706821-18706840 | None:intergenic | 30.0% |
| AAACAAGATGATCCAAAGCA+AGG | - | chr5.4:18710010-18710029 | MS.gene98449:CDS | 35.0% | |
| AACACTGAGGTTTACATCAA+TGG | - | chr5.4:18707550-18707569 | MS.gene98449:CDS | 35.0% | |
| AACTAGCACTATGTTTAAGC+AGG | - | chr5.4:18708103-18708122 | MS.gene98449:CDS | 35.0% | |
| AAGGATTCCGATATCATTAC+AGG | + | chr5.4:18708786-18708805 | None:intergenic | 35.0% | |
| AGTTCTGCTATAGTCTCTAT+TGG | + | chr5.4:18707325-18707344 | None:intergenic | 35.0% | |
| CAAATTTACTGATCAAGAGC+TGG | - | chr5.4:18708346-18708365 | MS.gene98449:intron | 35.0% | |
| CAATATGCTTACTTGGTCAT+TGG | + | chr5.4:18709739-18709758 | None:intergenic | 35.0% | |
| CATGTTTCGAATGCATGTTT+AGG | + | chr5.4:18708641-18708660 | None:intergenic | 35.0% | |
| CTAAACATGCATTCGAAACA+TGG | - | chr5.4:18708639-18708658 | MS.gene98449:intron | 35.0% | |
| CTGTATAAGCTTCGAACTTT+GGG | + | chr5.4:18709693-18709712 | None:intergenic | 35.0% | |
| CTTCTTCTTCTTGGAATTCA+AGG | - | chr5.4:18708074-18708093 | MS.gene98449:CDS | 35.0% | |
| TATAGTATGTCCCTTTCAGA+AGG | + | chr5.4:18709607-18709626 | None:intergenic | 35.0% | |
| TATTGGTACGACAAAGAATC+TGG | - | chr5.4:18706977-18706996 | MS.gene98449:intron | 35.0% | |
| TCAGAAAAATGCTTTAGCCT+TGG | + | chr5.4:18708892-18708911 | None:intergenic | 35.0% | |
| TCTGTATAAGCTTCGAACTT+TGG | + | chr5.4:18709694-18709713 | None:intergenic | 35.0% | |
| TCTTCGAGGAAAAAATGAGA+AGG | - | chr5.4:18710108-18710127 | MS.gene98449:CDS | 35.0% | |
| TGATCTTATAATTGCTGAGC+AGG | - | chr5.4:18708304-18708323 | MS.gene98449:intron | 35.0% | |
| TTCGGTACTTCATAAGAAAC+CGG | + | chr5.4:18706230-18706249 | None:intergenic | 35.0% | |
| TTTCAAAAAGCTCCTTGCTT+TGG | + | chr5.4:18710025-18710044 | None:intergenic | 35.0% | |
| ! | AAGCTCATCTTTTCGTTTGA+AGG | + | chr5.4:18709028-18709047 | None:intergenic | 35.0% |
| ! | AATCCAAGCGTCTGAAATTA+GGG | - | chr5.4:18706762-18706781 | MS.gene98449:intron | 35.0% |
| ! | CAGAAAAATGCTTTAGCCTT+GGG | + | chr5.4:18708891-18708910 | None:intergenic | 35.0% |
| ! | TGCTTTCATTTTCGCATGTA+TGG | - | chr5.4:18707048-18707067 | MS.gene98449:intron | 35.0% |
| ! | TTAAGAAGACTCTGGTTTCA+AGG | + | chr5.4:18709110-18709129 | None:intergenic | 35.0% |
| !! | AAAGGAGTGTCTTTGAAACA+AGG | + | chr5.4:18710062-18710081 | None:intergenic | 35.0% |
| !! | AAGGAGTGTCTTTGAAACAA+GGG | + | chr5.4:18710061-18710080 | None:intergenic | 35.0% |
| !! | CCGTAATTTTAAGAAGACTC+TGG | + | chr5.4:18709118-18709137 | None:intergenic | 35.0% |
| !! | GCTATTTTCATAAGCTATGC+TGG | + | chr5.4:18709323-18709342 | None:intergenic | 35.0% |
| !! | GGCTAAAGCATTTTTCTGAT+TGG | - | chr5.4:18708893-18708912 | MS.gene98449:intron | 35.0% |
| !! | GTTTCTAGAATGAATGGACA+AGG | - | chr5.4:18708455-18708474 | MS.gene98449:CDS | 35.0% |
| !! | GTTTGTTATAGGTGTGGTAA+AGG | - | chr5.4:18706611-18706630 | MS.gene98449:CDS | 35.0% |
| !! | TGCTTTGGATCATCTTGTTT+TGG | + | chr5.4:18710010-18710029 | None:intergenic | 35.0% |
| !!! | CAAGGAGCTTTTTGAAACAA+TGG | - | chr5.4:18710028-18710047 | MS.gene98449:CDS | 35.0% |
| !!! | CACTTTTGGGTTTATGATGA+TGG | - | chr5.4:18707791-18707810 | MS.gene98449:intron | 35.0% |
| !!! | TAATGTGCTCGCTTTTTTTC+AGG | - | chr5.4:18709552-18709571 | MS.gene98449:CDS | 35.0% |
| AAATACGTGACATCGGCAAA+GGG | + | chr5.4:18706295-18706314 | None:intergenic | 40.0% | |
| AAATTACTATGGTCCACCTG+AGG | - | chr5.4:18710370-18710389 | MS.gene98449:CDS | 40.0% | |
| AAGAGGAAACATTTGGGAGA+AGG | - | chr5.4:18707844-18707863 | MS.gene98449:intron | 40.0% | |
| AAGCTTGATGTGCTAGTGAT+TGG | + | chr5.4:18710196-18710215 | None:intergenic | 40.0% | |
| ACATCTAGAGGCTCAACTTT+CGG | + | chr5.4:18706248-18706267 | None:intergenic | 40.0% | |
| ACGACAAAGAATCTGGTCTA+TGG | - | chr5.4:18706984-18707003 | MS.gene98449:intron | 40.0% | |
| ACGACTATGAACCTTCTGAA+AGG | - | chr5.4:18709593-18709612 | MS.gene98449:CDS | 40.0% | |
| ACTCAGAAGCTTCTTCTTCT+TGG | - | chr5.4:18708065-18708084 | MS.gene98449:CDS | 40.0% | |
| AGGGACATACTATATGCAGA+AGG | - | chr5.4:18709613-18709632 | MS.gene98449:CDS | 40.0% | |
| AGTAAGTCTTCCATCTCATC+AGG | + | chr5.4:18706917-18706936 | None:intergenic | 40.0% | |
| ATAACTGATCGTAGTCGCTT+AGG | + | chr5.4:18709950-18709969 | None:intergenic | 40.0% | |
| ATCTCAGGTACCAACTCATA+AGG | - | chr5.4:18709844-18709863 | MS.gene98449:CDS | 40.0% | |
| ATTTACTGATCAAGAGCTGG+AGG | - | chr5.4:18708349-18708368 | MS.gene98449:intron | 40.0% | |
| CGACAAAGAATCTGGTCTAT+GGG | - | chr5.4:18706985-18707004 | MS.gene98449:intron | 40.0% | |
| CGCAAATGTGTAACATGCAT+CGG | - | chr5.4:18706725-18706744 | MS.gene98449:intron | 40.0% | |
| GAAAGCGGAGAAAGAATGTT+CGG | - | chr5.4:18706841-18706860 | MS.gene98449:CDS | 40.0% | |
| GACAAAGAATCTGGTCTATG+GGG | - | chr5.4:18706986-18707005 | MS.gene98449:intron | 40.0% | |
| GATGAGATGGAAGACTTACT+TGG | - | chr5.4:18706917-18706936 | MS.gene98449:CDS | 40.0% | |
| GCACTATGTTTAAGCAGGTA+TGG | - | chr5.4:18708108-18708127 | MS.gene98449:CDS | 40.0% | |
| GGACATACTATATGCAGAAG+GGG | - | chr5.4:18709615-18709634 | MS.gene98449:CDS | 40.0% | |
| GGGACATACTATATGCAGAA+GGG | - | chr5.4:18709614-18709633 | MS.gene98449:CDS | 40.0% | |
| GTCTCCTAATCATAGTCCAA+GGG | - | chr5.4:18706328-18706347 | MS.gene98449:CDS | 40.0% | |
| GTTTGAAGATGTTAGAGCAG+TGG | - | chr5.4:18709911-18709930 | MS.gene98449:CDS | 40.0% | |
| TAACTGATCGTAGTCGCTTA+GGG | + | chr5.4:18709949-18709968 | None:intergenic | 40.0% | |
| TCGACAGCTTCGGAATATTT+AGG | - | chr5.4:18706200-18706219 | MS.gene98449:CDS | 40.0% | |
| TCTCAGGTACCAACTCATAA+GGG | - | chr5.4:18709845-18709864 | MS.gene98449:CDS | 40.0% | |
| TCTGTAATTGAATCCTCAGG+TGG | + | chr5.4:18710386-18710405 | None:intergenic | 40.0% | |
| TCTTGATTACTCGACAGCTT+CGG | - | chr5.4:18706190-18706209 | MS.gene98449:CDS | 40.0% | |
| TTCGGAATATTTAGGTCCAC+CGG | - | chr5.4:18706208-18706227 | MS.gene98449:CDS | 40.0% | |
| TTCGGCATCATTGAACTCAA+TGG | - | chr5.4:18707712-18707731 | MS.gene98449:intron | 40.0% | |
| TTCTAAGCCGGTGATTAATG+AGG | - | chr5.4:18706457-18706476 | MS.gene98449:CDS | 40.0% | |
| TTGTCGTACCAATATCTACC+AGG | + | chr5.4:18706971-18706990 | None:intergenic | 40.0% | |
| TTTCCCTAATTTCAGACGCT+TGG | + | chr5.4:18706768-18706787 | None:intergenic | 40.0% | |
| TTTCCTCTGAGTCCTTTCAA+CGG | + | chr5.4:18706513-18706532 | None:intergenic | 40.0% | |
| ! | AGCAGGCCAAATTTTTGTAC+GGG | - | chr5.4:18708321-18708340 | MS.gene98449:intron | 40.0% |
| ! | CGACTATGAACCTTCTGAAA+GGG | - | chr5.4:18709594-18709613 | MS.gene98449:CDS | 40.0% |
| ! | GAATCCAAGCGTCTGAAATT+AGG | - | chr5.4:18706761-18706780 | MS.gene98449:intron | 40.0% |
| ! | GAGCAGGCCAAATTTTTGTA+CGG | - | chr5.4:18708320-18708339 | MS.gene98449:intron | 40.0% |
| ! | GGTTTCTGTGTTACTAAACC+CGG | - | chr5.4:18706373-18706392 | MS.gene98449:CDS | 40.0% |
| ! | TCGAATGCATGTTTAGGGTT+AGG | + | chr5.4:18708635-18708654 | None:intergenic | 40.0% |
| ! | TTCGAATGTTGCTTCTAAGC+CGG | - | chr5.4:18706445-18706464 | MS.gene98449:CDS | 40.0% |
| ! | TTGCAGAGTACTTCTTAAGC+CGG | - | chr5.4:18709064-18709083 | MS.gene98449:intron | 40.0% |
| !! | AAGAAGTACTCTGCAACATC+TGG | + | chr5.4:18709060-18709079 | None:intergenic | 40.0% |
| !! | CTTAGCACTGATGCTAGTAA+CGG | - | chr5.4:18707526-18707545 | MS.gene98449:CDS | 40.0% |
| !! | GAGGCTGTTTCTAGAATGAA+TGG | - | chr5.4:18708449-18708468 | MS.gene98449:CDS | 40.0% |
| !! | TCAAGATTAGAAGCGTCATC+AGG | + | chr5.4:18706176-18706195 | None:intergenic | 40.0% |
| !! | TCCACGTGATACTCACTTTT+GGG | - | chr5.4:18707778-18707797 | MS.gene98449:intron | 40.0% |
| !! | TTAGCACTGATGCTAGTAAC+GGG | - | chr5.4:18707527-18707546 | MS.gene98449:CDS | 40.0% |
| !! | TTATGATGATGGTCGTTACG+AGG | - | chr5.4:18707802-18707821 | MS.gene98449:intron | 40.0% |
| !! | TTCCAGTGATGGATGCATAA+AGG | + | chr5.4:18710247-18710266 | None:intergenic | 40.0% |
| !! | TTTCAGCTTTGGGGAGATTA+AGG | - | chr5.4:18709509-18709528 | MS.gene98449:intron | 40.0% |
| AAGCTATGCTGGAGAGCTTA+CGG | + | chr5.4:18709312-18709331 | None:intergenic | 45.0% | |
| ACACCGGAAATACGTGACAT+CGG | + | chr5.4:18706302-18706321 | None:intergenic | 45.0% | |
| ACCCAAAAGTGAGTATCACG+TGG | + | chr5.4:18707782-18707801 | None:intergenic | 45.0% | |
| ACTCATAAGGGTGAATGCCA+AGG | - | chr5.4:18709857-18709876 | MS.gene98449:CDS | 45.0% | |
| AGAATCTGGTCTATGGGGAA+AGG | - | chr5.4:18706991-18707010 | MS.gene98449:intron | 45.0% | |
| AGACGCTTGGATTCGTCAAT+AGG | + | chr5.4:18706755-18706774 | None:intergenic | 45.0% | |
| AGCTGAAGCCTGGTAGATAT+TGG | - | chr5.4:18706960-18706979 | MS.gene98449:intron | 45.0% | |
| AGGAGATAATTGGAGGGAAG+TGG | - | chr5.4:18706118-18706137 | MS.gene98449:CDS | 45.0% | |
| AGGATAGGGTAGAGAGAAGA+GGG | + | chr5.4:18707970-18707989 | None:intergenic | 45.0% | |
| AGGTTCTCCTGCTCACATTA+TGG | - | chr5.4:18708475-18708494 | MS.gene98449:CDS | 45.0% | |
| AGTACTCTGCAACATCTGGA+AGG | + | chr5.4:18709056-18709075 | None:intergenic | 45.0% | |
| ATACCGTTGAAAGGACTCAG+AGG | - | chr5.4:18706507-18706526 | MS.gene98449:CDS | 45.0% | |
| ATAGGTGTGGTAAAGGGAAG+TGG | - | chr5.4:18706618-18706637 | MS.gene98449:CDS | 45.0% | |
| ATATGCAGAAGGGGTTACTC+AGG | - | chr5.4:18709624-18709643 | MS.gene98449:CDS | 45.0% | |
| CCTCTAGATGTGAAGTTCAG+AGG | - | chr5.4:18706257-18706276 | MS.gene98449:CDS | 45.0% | |
| CCTCTGAACTTCACATCTAG+AGG | + | chr5.4:18706260-18706279 | None:intergenic | 45.0% | |
| CTAAACCCGGATCTTTCTTC+TGG | - | chr5.4:18706386-18706405 | MS.gene98449:CDS | 45.0% | |
| CTCATAAGGGTGAATGCCAA+GGG | - | chr5.4:18709858-18709877 | MS.gene98449:CDS | 45.0% | |
| CTCTTCGCCTCATTAATCAC+CGG | + | chr5.4:18706467-18706486 | None:intergenic | 45.0% | |
| CTTCCATCTCATCAGGTTTG+AGG | + | chr5.4:18706910-18706929 | None:intergenic | 45.0% | |
| CTTCTTGGAATTCAAGGGTC+TGG | - | chr5.4:18708080-18708099 | MS.gene98449:CDS | 45.0% | |
| GAAATACGTGACATCGGCAA+AGG | + | chr5.4:18706296-18706315 | None:intergenic | 45.0% | |
| GAAGGATTATGAACCGAAGC+CGG | + | chr5.4:18706428-18706447 | None:intergenic | 45.0% | |
| GAATGCATCTAAATCCCCAG+TGG | + | chr5.4:18708935-18708954 | None:intergenic | 45.0% | |
| GACACCCTTGGACTATGATT+AGG | + | chr5.4:18706335-18706354 | None:intergenic | 45.0% | |
| GACCTTTATGCATCCATCAC+TGG | - | chr5.4:18710242-18710261 | MS.gene98449:CDS | 45.0% | |
| GCATCTATTCTCTCAACCCA+AGG | - | chr5.4:18708872-18708891 | MS.gene98449:intron | 45.0% | |
| GGCTTAGAAGCAACATTCGA+AGG | + | chr5.4:18706446-18706465 | None:intergenic | 45.0% | |
| GGTACTTCATAAGAAACCGG+TGG | + | chr5.4:18706227-18706246 | None:intergenic | 45.0% | |
| GGTCTCCTAATCATAGTCCA+AGG | - | chr5.4:18706327-18706346 | MS.gene98449:CDS | 45.0% | |
| GGTTACTCAGGGAAATGGTT+TGG | - | chr5.4:18709636-18709655 | MS.gene98449:CDS | 45.0% | |
| GTCTGGAAGTTCAGAATCTG+TGG | - | chr5.4:18706352-18706371 | MS.gene98449:CDS | 45.0% | |
| TAGGTGTGGTAAAGGGAAGT+GGG | - | chr5.4:18706619-18706638 | MS.gene98449:CDS | 45.0% | |
| TATCCCTCAACGCTTGTGAA+TGG | - | chr5.4:18710132-18710151 | MS.gene98449:CDS | 45.0% | |
| TATGCAGAAGGGGTTACTCA+GGG | - | chr5.4:18709625-18709644 | MS.gene98449:CDS | 45.0% | |
| TCCTGGACATTATTGCCACT+GGG | - | chr5.4:18708917-18708936 | MS.gene98449:intron | 45.0% | |
| TCGAAACATGGATGCGTACA+TGG | - | chr5.4:18708651-18708670 | MS.gene98449:intron | 45.0% | |
| TCTCCTCAAACCTGATGAGA+TGG | - | chr5.4:18706904-18706923 | MS.gene98449:CDS | 45.0% | |
| TGAAAGGACTCAGAGGAAAG+AGG | - | chr5.4:18706514-18706533 | MS.gene98449:CDS | 45.0% | |
| TGGCATTCACCCTTATGAGT+TGG | + | chr5.4:18709857-18709876 | None:intergenic | 45.0% | |
| TGTTGCACAAGTTAGGGCAA+GGG | - | chr5.4:18710277-18710296 | MS.gene98449:CDS | 45.0% | |
| TTCACAACTCCAACGTACTC+CGG | + | chr5.4:18706566-18706585 | None:intergenic | 45.0% | |
| TTCCACACTTCTTCGACTAG+TGG | + | chr5.4:18708985-18709004 | None:intergenic | 45.0% | |
| TTCTCTCTACCCTATCCTCA+TGG | - | chr5.4:18707972-18707991 | MS.gene98449:intron | 45.0% | |
| TTGAAGGTCTCTTGTATCGC+TGG | + | chr5.4:18709012-18709031 | None:intergenic | 45.0% | |
| TTGCCGATGTCACGTATTTC+CGG | - | chr5.4:18706296-18706315 | MS.gene98449:CDS | 45.0% | |
| TTGGTTGCAACTGAGCATCA+AGG | + | chr5.4:18709720-18709739 | None:intergenic | 45.0% | |
| TTGTTGCACAAGTTAGGGCA+AGG | - | chr5.4:18710276-18710295 | MS.gene98449:CDS | 45.0% | |
| ! | GTCCACGTGATACTCACTTT+TGG | - | chr5.4:18707777-18707796 | MS.gene98449:intron | 45.0% |
| ! | TGAACCATTCACAAGCGTTG+AGG | + | chr5.4:18710139-18710158 | None:intergenic | 45.0% |
| ! | TGCAGAGTACTTCTTAAGCC+GGG | - | chr5.4:18709065-18709084 | MS.gene98449:intron | 45.0% |
| !! | AACTCGAATTGAGGGTACTC+AGG | - | chr5.4:18707587-18707606 | MS.gene98449:CDS | 45.0% |
| !! | AATCATAGTCCAAGGGTGTC+TGG | - | chr5.4:18706335-18706354 | MS.gene98449:CDS | 45.0% |
| !! | ACTCGAATTGAGGGTACTCA+GGG | - | chr5.4:18707588-18707607 | MS.gene98449:CDS | 45.0% |
| !! | GAACCATTCACAAGCGTTGA+GGG | + | chr5.4:18710138-18710157 | None:intergenic | 45.0% |
| !! | GCATTTTTCTGATTGGCTCC+TGG | - | chr5.4:18708900-18708919 | MS.gene98449:intron | 45.0% |
| !! | GGGAAATGGTTTGGCTTTCA+TGG | - | chr5.4:18709645-18709664 | MS.gene98449:CDS | 45.0% |
| !!! | AAGAGAGCGTTTTGAAGAGG+AGG | - | chr5.4:18708430-18708449 | MS.gene98449:CDS | 45.0% |
| AAGGACTCAGAGGAAAGAGG+TGG | - | chr5.4:18706517-18706536 | MS.gene98449:CDS | 50.0% | |
| ATGAGGCTGTCCATGAGGAT+AGG | + | chr5.4:18707985-18708004 | None:intergenic | 50.0% | |
| CACCACTAGTCGAAGAAGTG+TGG | - | chr5.4:18708980-18708999 | MS.gene98449:CDS | 50.0% | |
| CATGAGCGAAGGTTGCAAGT+GGG | - | chr5.4:18709881-18709900 | MS.gene98449:CDS | 50.0% | |
| CCAGAGCAGTTGAGTGTCAA+CGG | - | chr5.4:18706878-18706897 | MS.gene98449:CDS | 50.0% | |
| CCAGCTTCCATAATGTGAGC+AGG | + | chr5.4:18708485-18708504 | None:intergenic | 50.0% | |
| CCTGCTCACATTATGGAAGC+TGG | - | chr5.4:18708482-18708501 | MS.gene98449:CDS | 50.0% | |
| CCTGGACATTATTGCCACTG+GGG | - | chr5.4:18708918-18708937 | MS.gene98449:intron | 50.0% | |
| CGATGGGATCAATGCCTGAA+GGG | - | chr5.4:18706702-18706721 | MS.gene98449:intron | 50.0% | |
| CGGTGATTAATGAGGCGAAG+AGG | - | chr5.4:18706465-18706484 | MS.gene98449:CDS | 50.0% | |
| CTCCTGGACATTATTGCCAC+TGG | - | chr5.4:18708916-18708935 | MS.gene98449:intron | 50.0% | |
| CTTCCAGAGGACTCAACAGT+CGG | + | chr5.4:18706808-18706827 | None:intergenic | 50.0% | |
| GAAGGGGTTACTCAGGGAAA+TGG | - | chr5.4:18709631-18709650 | MS.gene98449:CDS | 50.0% | |
| GAGGATAGGGTAGAGAGAAG+AGG | + | chr5.4:18707971-18707990 | None:intergenic | 50.0% | |
| GCGAACCAGAAGAAAGATCC+GGG | + | chr5.4:18706394-18706413 | None:intergenic | 50.0% | |
| GCTTGGATTCGTCAATAGGC+TGG | + | chr5.4:18706751-18706770 | None:intergenic | 50.0% | |
| GGCGAACCAGAAGAAAGATC+CGG | + | chr5.4:18706395-18706414 | None:intergenic | 50.0% | |
| GTCACGTATTTCCGGTGTGA+CGG | - | chr5.4:18706304-18706323 | MS.gene98449:CDS | 50.0% | |
| GTTACACATTTGCGCCCTTC+AGG | + | chr5.4:18706719-18706738 | None:intergenic | 50.0% | |
| TATCCTCATGGACAGCCTCA+TGG | - | chr5.4:18707984-18708003 | MS.gene98449:intron | 50.0% | |
| TCACGTATTTCCGGTGTGAC+GGG | - | chr5.4:18706305-18706324 | MS.gene98449:CDS | 50.0% | |
| TCTGAACTTCCAGACACCCT+TGG | + | chr5.4:18706347-18706366 | None:intergenic | 50.0% | |
| TGAGGCTGTCCATGAGGATA+GGG | + | chr5.4:18707984-18708003 | None:intergenic | 50.0% | |
| TGTCTTGCACCAGACAGCAA+TGG | - | chr5.4:18709969-18709988 | MS.gene98449:CDS | 50.0% | |
| TTCAGCTTGCGTGGAGGTAA+GGG | + | chr5.4:18706947-18706966 | None:intergenic | 50.0% | |
| TTCCAGAGGACTCAACAGTC+GGG | + | chr5.4:18706807-18706826 | None:intergenic | 50.0% | |
| ! | CATATTCACGTGTCGCTGCA+GGG | + | chr5.4:18708960-18708979 | None:intergenic | 50.0% |
| ! | TGCTAGTAACGGGAACACTG+AGG | - | chr5.4:18707537-18707556 | MS.gene98449:CDS | 50.0% |
| !! | TCATCAGGAACAGAAGCACC+CGG | + | chr5.4:18706161-18706180 | None:intergenic | 50.0% |
| !! | TGATGATGGTCGTTACGAGG+AGG | - | chr5.4:18707805-18707824 | MS.gene98449:intron | 50.0% |
| !!! | CGGAAGAGAGCGTTTTGAAG+AGG | - | chr5.4:18708427-18708446 | MS.gene98449:CDS | 50.0% |
| ATCCCGACTGTTGAGTCCTC+TGG | - | chr5.4:18706802-18706821 | MS.gene98449:CDS | 55.0% | |
| ATTAGGAGACCCCGTCACAC+CGG | + | chr5.4:18706318-18706337 | None:intergenic | 55.0% | |
| ATTGCAGCAGCTGTGTGCTC+AGG | - | chr5.4:18706678-18706697 | MS.gene98449:intron | 55.0% | |
| CACGTATTTCCGGTGTGACG+GGG | - | chr5.4:18706306-18706325 | MS.gene98449:CDS | 55.0% | |
| CCCCAGTGGCAATAATGTCC+AGG | + | chr5.4:18708921-18708940 | None:intergenic | 55.0% | |
| CCGTTGACACTCAACTGCTC+TGG | + | chr5.4:18706881-18706900 | None:intergenic | 55.0% | |
| CTTCAGCTTGCGTGGAGGTA+AGG | + | chr5.4:18706948-18706967 | None:intergenic | 55.0% | |
| GACTCAGAGGAAAGAGGTGG+TGG | - | chr5.4:18706520-18706539 | MS.gene98449:CDS | 55.0% | |
| GATCCATGAGGCTGTCCATG+AGG | + | chr5.4:18707990-18708009 | None:intergenic | 55.0% | |
| GATGGTCGTTACGAGGAGGA+AGG | - | chr5.4:18707809-18707828 | MS.gene98449:intron | 55.0% | |
| GCATGAGCGAAGGTTGCAAG+TGG | - | chr5.4:18709880-18709899 | MS.gene98449:CDS | 55.0% | |
| GCCTCATGGATCAAGAGACG+AGG | - | chr5.4:18707998-18708017 | MS.gene98449:intron | 55.0% | |
| GCCTCGTCTCTTGATCCATG+AGG | + | chr5.4:18708002-18708021 | None:intergenic | 55.0% | |
| GCGATGGGATCAATGCCTGA+AGG | - | chr5.4:18706701-18706720 | MS.gene98449:intron | 55.0% | |
| GGTGAAGAAGATGCTTCCGC+CGG | - | chr5.4:18706139-18706158 | MS.gene98449:CDS | 55.0% | |
| GTGAAGAAGATGCTTCCGCC+GGG | - | chr5.4:18706140-18706159 | MS.gene98449:CDS | 55.0% | |
| TGGTTCGCCTTCAGCTTCAC+CGG | - | chr5.4:18706406-18706425 | MS.gene98449:CDS | 55.0% | |
| TTGCAGCAGCTGTGTGCTCA+GGG | - | chr5.4:18706679-18706698 | MS.gene98449:intron | 55.0% | |
| ! | AATGCCAAGGGCATGAGCGA+AGG | - | chr5.4:18709870-18709889 | MS.gene98449:CDS | 55.0% |
| ! | GCATATTCACGTGTCGCTGC+AGG | + | chr5.4:18708961-18708980 | None:intergenic | 55.0% |
| ! | TCAGAGGAAAGAGGTGGTGG+AGG | - | chr5.4:18706523-18706542 | MS.gene98449:CDS | 55.0% |
| ACCGAAGCCGGTGAAGCTGA+AGG | + | chr5.4:18706416-18706435 | None:intergenic | 60.0% | |
| AGCTGTGTGCTCAGGGCGAT+GGG | - | chr5.4:18706686-18706705 | MS.gene98449:intron | 60.0% | |
| CCAACGTACTCCGGATACGC+CGG | + | chr5.4:18706557-18706576 | None:intergenic | 60.0% | |
| CTACCAGGCTTCAGCTTGCG+TGG | + | chr5.4:18706956-18706975 | None:intergenic | 60.0% | |
| GCAACCTTCGCTCATGCCCT+TGG | + | chr5.4:18709877-18709896 | None:intergenic | 60.0% | |
| GCACCAGACAGCAATGGCAG+CGG | - | chr5.4:18709975-18709994 | MS.gene98449:CDS | 60.0% | |
| GGTTGTGAAGCCGGCGTATC+CGG | - | chr5.4:18706544-18706563 | MS.gene98449:CDS | 60.0% | |
| GTTCCGCTGCCATTGCTGTC+TGG | + | chr5.4:18709981-18710000 | None:intergenic | 60.0% | |
| GTTGTTGTCGTGTGCGCGCA+CGG | + | chr5.4:18710174-18710193 | None:intergenic | 60.0% | |
| TTGTTGTCGTGTGCGCGCAC+GGG | + | chr5.4:18710173-18710192 | None:intergenic | 60.0% | |
| !! | GCCTTCAGCTTCACCGGCTT+CGG | - | chr5.4:18706412-18706431 | MS.gene98449:CDS | 60.0% |
| !! | GGTGGTGGAGGTTGTGAAGC+CGG | - | chr5.4:18706535-18706554 | MS.gene98449:CDS | 60.0% |
| !! | TCAGGAACAGAAGCACCCGG+CGG | + | chr5.4:18706158-18706177 | None:intergenic | 60.0% |
| CAGCTGTGTGCTCAGGGCGA+TGG | - | chr5.4:18706685-18706704 | MS.gene98449:intron | 65.0% | |
| CCAGGCTTCAGCTTGCGTGG+AGG | + | chr5.4:18706953-18706972 | None:intergenic | 65.0% | |
| CCGGCGTATCCGGAGTACGT+TGG | - | chr5.4:18706554-18706573 | MS.gene98449:CDS | 65.0% | |
| CCTCCACGCAAGCTGAAGCC+TGG | - | chr5.4:18706950-18706969 | MS.gene98449:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18706104 | 18710439 | 18706104 | ID=MS.gene98449 |
| chr5.4 | mRNA | 18706104 | 18710439 | 18706104 | ID=MS.gene98449.t1;Parent=MS.gene98449 |
| chr5.4 | exon | 18709531 | 18710439 | 18709531 | ID=MS.gene98449.t1.exon1;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18709531 | 18710439 | 18709531 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| chr5.4 | exon | 18708934 | 18709071 | 18708934 | ID=MS.gene98449.t1.exon2;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18708934 | 18709071 | 18708934 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| chr5.4 | exon | 18708678 | 18708782 | 18708678 | ID=MS.gene98449.t1.exon3;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18708678 | 18708782 | 18708678 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| chr5.4 | exon | 18708419 | 18708598 | 18708419 | ID=MS.gene98449.t1.exon4;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18708419 | 18708598 | 18708419 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| chr5.4 | exon | 18708040 | 18708217 | 18708040 | ID=MS.gene98449.t1.exon5;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18708040 | 18708217 | 18708040 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| chr5.4 | exon | 18707457 | 18707704 | 18707457 | ID=MS.gene98449.t1.exon6;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18707457 | 18707704 | 18707457 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| chr5.4 | exon | 18706797 | 18706969 | 18706797 | ID=MS.gene98449.t1.exon7;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18706797 | 18706969 | 18706797 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| chr5.4 | exon | 18706104 | 18706692 | 18706104 | ID=MS.gene98449.t1.exon8;Parent=MS.gene98449.t1 |
| chr5.4 | CDS | 18706104 | 18706692 | 18706104 | ID=cds.MS.gene98449.t1;Parent=MS.gene98449.t1 |
| Gene Sequence |
| Protein sequence |
