Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98499.t1 | XP_003595434.1 | 95.5 | 506 | 23 | 0 | 1 | 506 | 1 | 506 | 1.60E-292 | 1014.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98499.t1 | P42211 | 49.8 | 502 | 240 | 3 | 6 | 507 | 7 | 496 | 3.6e-152 | 539.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98499.t1 | G7IQG4 | 95.5 | 506 | 23 | 0 | 1 | 506 | 1 | 506 | 1.1e-292 | 1014.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054548 | MS.gene98499 | 0.812539 | 4.03E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene98499 | 0.829709 | 4.42E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98499.t1 | MTR_2g045420 | 95.266 | 507 | 24 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1001 |
| MS.gene98499.t1 | MTR_2g045420 | 90.449 | 534 | 24 | 1 | 1 | 507 | 1 | 534 | 0.0 | 988 |
| MS.gene98499.t1 | MTR_2g045420 | 90.619 | 533 | 24 | 1 | 1 | 507 | 1 | 533 | 0.0 | 988 |
| MS.gene98499.t1 | MTR_4g123563 | 67.258 | 507 | 156 | 2 | 1 | 507 | 1 | 497 | 0.0 | 737 |
| MS.gene98499.t1 | MTR_7g111530 | 53.438 | 509 | 230 | 4 | 1 | 507 | 8 | 511 | 0.0 | 568 |
| MS.gene98499.t1 | MTR_7g111530 | 53.438 | 509 | 230 | 4 | 1 | 507 | 1 | 504 | 0.0 | 568 |
| MS.gene98499.t1 | MTR_1g484940 | 51.257 | 517 | 233 | 5 | 1 | 507 | 1 | 508 | 0.0 | 560 |
| MS.gene98499.t1 | MTR_4g132420 | 48.099 | 526 | 247 | 4 | 1 | 507 | 1 | 519 | 0.0 | 521 |
| MS.gene98499.t1 | MTR_2g023910 | 49.708 | 513 | 249 | 3 | 1 | 507 | 1 | 510 | 1.28e-180 | 516 |
| MS.gene98499.t1 | MTR_7g111530 | 52.561 | 449 | 209 | 3 | 1 | 447 | 1 | 447 | 1.11e-169 | 487 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98499.t1 | AT1G11910 | 50.598 | 502 | 240 | 4 | 7 | 507 | 12 | 506 | 0.0 | 529 |
| MS.gene98499.t1 | AT1G11910 | 50.598 | 502 | 240 | 4 | 7 | 507 | 23 | 517 | 0.0 | 529 |
| MS.gene98499.t1 | AT1G62290 | 50.202 | 494 | 236 | 3 | 20 | 506 | 22 | 512 | 0.0 | 528 |
| MS.gene98499.t1 | AT1G62290 | 50.202 | 494 | 236 | 3 | 20 | 506 | 22 | 512 | 0.0 | 528 |
| MS.gene98499.t1 | AT4G04460 | 46.471 | 510 | 261 | 5 | 2 | 507 | 7 | 508 | 2.31e-172 | 496 |
| MS.gene98499.t1 | AT1G62290 | 50.000 | 468 | 224 | 3 | 20 | 480 | 22 | 486 | 2.13e-171 | 492 |
| MS.gene98499.t1 | AT4G04460 | 46.275 | 510 | 258 | 6 | 2 | 507 | 7 | 504 | 1.30e-169 | 488 |
| MS.gene98499.t1 | AT1G62290 | 49.885 | 435 | 211 | 2 | 20 | 447 | 22 | 456 | 1.10e-158 | 459 |
| MS.gene98499.t1 | AT1G62290 | 49.885 | 435 | 211 | 2 | 20 | 447 | 22 | 456 | 1.10e-158 | 459 |
| MS.gene98499.t1 | AT1G62290 | 50.000 | 396 | 191 | 2 | 20 | 408 | 22 | 417 | 8.40e-141 | 412 |
| MS.gene98499.t1 | AT4G22050 | 42.041 | 245 | 134 | 7 | 68 | 308 | 34 | 274 | 8.04e-48 | 169 |
| MS.gene98499.t1 | AT1G69100 | 37.500 | 256 | 144 | 8 | 63 | 307 | 38 | 288 | 4.01e-41 | 152 |
| MS.gene98499.t1 | AT1G69100 | 37.500 | 256 | 144 | 8 | 63 | 307 | 30 | 280 | 4.22e-41 | 151 |
Find 115 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTTACCAATTTCGTTAT+AGG | 0.173032 | 2.1:+45299314 | None:intergenic |
| TACTTCGATGTACAATATTA+TGG | 0.181183 | 2.1:-45299599 | MS.gene98499:CDS |
| TATGACGAAGGATACATTTA+TGG | 0.197072 | 2.1:-45299200 | MS.gene98499:CDS |
| GATAGAACAAGGGCATATTT+TGG | 0.210982 | 2.1:-45298523 | MS.gene98499:CDS |
| TTAACACTTCAAGAATTAAA+AGG | 0.219516 | 2.1:-45299694 | MS.gene98499:CDS |
| TATACTTGGACTTGGATTTC+AGG | 0.221417 | 2.1:-45298965 | MS.gene98499:CDS |
| TTGGATTTGGTCTCTATCTT+TGG | 0.223238 | 2.1:-45299786 | MS.gene98499:CDS |
| CAATAACCCTCTTGAGAAAT+TGG | 0.237329 | 2.1:+45298390 | None:intergenic |
| ATGTCAGCACATAAGATTTC+AGG | 0.241847 | 2.1:+45297048 | None:intergenic |
| AATGATTGTCCAACTGGATT+TGG | 0.243337 | 2.1:+45296337 | None:intergenic |
| GAGAGTGTTGATACAAATTA+TGG | 0.243779 | 2.1:-45299650 | MS.gene98499:CDS |
| CAATTTCTCAAGAGGGTTAT+TGG | 0.244036 | 2.1:-45298389 | MS.gene98499:CDS |
| ACACTGGTAGCTCTAATCTT+TGG | 0.244114 | 2.1:-45299529 | MS.gene98499:CDS |
| TTTCTCCCTATGGTTAAATA+AGG | 0.246886 | 2.1:-45298493 | MS.gene98499:CDS |
| CAAAAGAGACTCTCTCTTAA+TGG | 0.252205 | 2.1:+45296854 | None:intergenic |
| ATATGGGAATCATTGATTTC+AGG | 0.264136 | 2.1:-45297319 | MS.gene98499:CDS |
| CACTGGTAGCTCTAATCTTT+GGG | 0.265139 | 2.1:-45299528 | MS.gene98499:CDS |
| GTACAATATTATGGGGAAAT+TGG | 0.281616 | 2.1:-45299590 | MS.gene98499:CDS |
| TGCTGGTTGTTACATGTCTT+TGG | 0.282305 | 2.1:-45299805 | MS.gene98499:CDS |
| ATTAGACTTTGTTCAGATAA+TGG | 0.288447 | 2.1:-45297027 | MS.gene98499:CDS |
| TCTAGCACCTATAACGAAAT+TGG | 0.307202 | 2.1:-45299321 | MS.gene98499:intron |
| CTTCCATTTGATGGTATACT+TGG | 0.310582 | 2.1:-45298979 | MS.gene98499:CDS |
| CTTGAAATACAAACCTGTTC+TGG | 0.319928 | 2.1:+45296241 | None:intergenic |
| CCACACATTACATTCACATT+TGG | 0.326867 | 2.1:-45296286 | MS.gene98499:CDS |
| TTGTTACATGTCTTTGGATT+TGG | 0.336597 | 2.1:-45299799 | MS.gene98499:CDS |
| TTTATAAATGATTGTCCAAC+TGG | 0.340576 | 2.1:+45296331 | None:intergenic |
| ATAACTACGGAAATTCGATA+TGG | 0.362943 | 2.1:-45297336 | MS.gene98499:CDS |
| ACTTCGATGTACAATATTAT+GGG | 0.364929 | 2.1:-45299598 | MS.gene98499:CDS |
| ATGATTGTCCAACTGGATTT+GGG | 0.366221 | 2.1:+45296338 | None:intergenic |
| ATATCGAATTTCCGTAGTTA+TGG | 0.381442 | 2.1:+45297338 | None:intergenic |
| GCTTATACAATTTCTAATGA+TGG | 0.391047 | 2.1:-45299764 | MS.gene98499:CDS |
| TATTATGGGGAAATTGGTAT+TGG | 0.391129 | 2.1:-45299584 | MS.gene98499:CDS |
| GCCAAGACAATGTAAAAGTT+GGG | 0.392884 | 2.1:-45299169 | MS.gene98499:CDS |
| GTTTCCTCTCTCTCCAGAAC+AGG | 0.404382 | 2.1:-45296254 | MS.gene98499:intron |
| CAGATTCTGCAAATCCTATA+CGG | 0.404994 | 2.1:+45295714 | None:intergenic |
| TCTTGATGTGCCTTCCCCAC+AGG | 0.408161 | 2.1:-45295929 | MS.gene98499:CDS |
| CTGTGCTGCAATAGTGGACT+CGG | 0.415057 | 2.1:-45297536 | MS.gene98499:CDS |
| TATGGGAATCATTGATTTCA+GGG | 0.417684 | 2.1:-45297318 | MS.gene98499:CDS |
| TTTGCAATATGGTTGTCCTT+TGG | 0.425536 | 2.1:-45296826 | MS.gene98499:CDS |
| TCGGGGACTACTTTAATTGC+CGG | 0.429816 | 2.1:-45297517 | MS.gene98499:CDS |
| TGCAAATCCTATACGGAGAT+TGG | 0.430860 | 2.1:+45295721 | None:intergenic |
| TTGGATCCTTATTTAACCAT+AGG | 0.445146 | 2.1:+45298487 | None:intergenic |
| GTAGGTGGTGAGATTGTCTT+TGG | 0.445186 | 2.1:-45298456 | MS.gene98499:CDS |
| TTTGATGGTATACTTGGACT+TGG | 0.456207 | 2.1:-45298973 | MS.gene98499:CDS |
| AGCCAAGACAATGTAAAAGT+TGG | 0.457098 | 2.1:-45299170 | MS.gene98499:CDS |
| TTTCATTCGAAGTATAGGTC+CGG | 0.458334 | 2.1:-45299348 | MS.gene98499:CDS |
| CTTCCCCACAGGGTCCCCTC+TGG | 0.461021 | 2.1:-45295918 | MS.gene98499:intron |
| CTACTTGCAAATAATACAAC+AGG | 0.464850 | 2.1:-45298264 | MS.gene98499:intron |
| CAGTGGTGCATAATGAAAGT+TGG | 0.466959 | 2.1:-45296886 | MS.gene98499:CDS |
| GGGTGGCTGTGCTGCAATAG+TGG | 0.468506 | 2.1:-45297542 | MS.gene98499:CDS |
| GGATTTCAGGATGTTTCAGT+TGG | 0.471759 | 2.1:-45298952 | MS.gene98499:CDS |
| TAACACTTCAAGAATTAAAA+GGG | 0.476044 | 2.1:-45299693 | MS.gene98499:CDS |
| AGTCCAAGTATACCATCAAA+TGG | 0.476577 | 2.1:+45298976 | None:intergenic |
| ATATGTATGTGCAGGGTTGT+TGG | 0.477358 | 2.1:-45295785 | MS.gene98499:intron |
| CTTGATGTGCCTTCCCCACA+GGG | 0.478328 | 2.1:-45295928 | MS.gene98499:CDS |
| TTCTCAAGAGGGTTATTGGC+AGG | 0.482133 | 2.1:-45298385 | MS.gene98499:intron |
| TGGATCCTTATTTAACCATA+GGG | 0.490719 | 2.1:+45298488 | None:intergenic |
| TAAATGTATCCTTCGTCATA+CGG | 0.490882 | 2.1:+45299203 | None:intergenic |
| CAGAGGGGACCCTGTGGGGA+AGG | 0.496212 | 2.1:+45295919 | None:intergenic |
| TCACCACCTACTTCTGCCAT+TGG | 0.500814 | 2.1:+45298468 | None:intergenic |
| AACCATGCCATTGGAACAGA+AGG | 0.503270 | 2.1:-45297391 | MS.gene98499:CDS |
| GAGAAGATGCATCTTGAAGA+TGG | 0.504280 | 2.1:+45299503 | None:intergenic |
| GATTTCAGGATGTTTCAGTT+GGG | 0.511773 | 2.1:-45298951 | MS.gene98499:CDS |
| AGTGGTGCATAATGAAAGTT+GGG | 0.513363 | 2.1:-45296885 | MS.gene98499:CDS |
| TAACTACGGAAATTCGATAT+GGG | 0.515650 | 2.1:-45297335 | MS.gene98499:CDS |
| TTCATTCGAAGTATAGGTCC+GGG | 0.518192 | 2.1:-45299347 | MS.gene98499:CDS |
| ACTCAAATTAACCATGCCAT+TGG | 0.518999 | 2.1:-45297400 | MS.gene98499:CDS |
| GTTATAGGTGCTAGATATCC+CGG | 0.521288 | 2.1:+45299329 | None:intergenic |
| AAATGTATCCTTCGTCATAC+GGG | 0.521845 | 2.1:+45299204 | None:intergenic |
| AACAAATCCTTCTGTTCCAA+TGG | 0.528562 | 2.1:+45297384 | None:intergenic |
| GGTGGTGAGATTGTCTTTGG+TGG | 0.532460 | 2.1:-45298453 | MS.gene98499:CDS |
| ATCCTTCTGTTCCAATGGCA+TGG | 0.535909 | 2.1:+45297389 | None:intergenic |
| GATTAAGCAAAGCAATGTAA+AGG | 0.536096 | 2.1:-45296792 | MS.gene98499:CDS |
| TACTTTCCAATTTCTCAAGA+GGG | 0.541272 | 2.1:-45298396 | MS.gene98499:CDS |
| TGTTCTCCTGTGTGCTATAG+CGG | 0.548629 | 2.1:-45295961 | MS.gene98499:CDS |
| TTACTTTCCAATTTCTCAAG+AGG | 0.549803 | 2.1:-45298397 | MS.gene98499:CDS |
| GACTACGCCAATCTCCGTAT+AGG | 0.550968 | 2.1:-45295728 | MS.gene98499:CDS |
| TGAGATTGTCTTTGGTGGTG+TGG | 0.551573 | 2.1:-45298448 | MS.gene98499:CDS |
| TGTGCTGCAATAGTGGACTC+GGG | 0.559334 | 2.1:-45297535 | MS.gene98499:CDS |
| GAGATGATATACAGTTGGAC+CGG | 0.561077 | 2.1:+45297498 | None:intergenic |
| AAGGATCCAATGGCAGAAGT+AGG | 0.566235 | 2.1:-45298474 | MS.gene98499:CDS |
| ATGGTTAAATAAGGATCCAA+TGG | 0.567385 | 2.1:-45298484 | MS.gene98499:CDS |
| TATAAACTGCAGTAGTGTCT+CGG | 0.571090 | 2.1:-45296314 | MS.gene98499:CDS |
| TTCAATGTTGTGTTTGACAC+TGG | 0.573693 | 2.1:-45299545 | MS.gene98499:CDS |
| TCGTCATACGGGATTTCGCA+TGG | 0.575056 | 2.1:+45299215 | None:intergenic |
| CAAACCTGTTCTGGAGAGAG+AGG | 0.576097 | 2.1:+45296250 | None:intergenic |
| TTGTATCTGCAGATTGAAGT+GGG | 0.578198 | 2.1:-45298294 | MS.gene98499:intron |
| GATGAGTTTGAAGTATATGC+TGG | 0.581629 | 2.1:-45299822 | MS.gene98499:CDS |
| GAGAAATTGGAAAGTAAGTG+TGG | 0.591719 | 2.1:+45298403 | None:intergenic |
| CCAAGACAATGTAAAAGTTG+GGG | 0.597378 | 2.1:-45299168 | MS.gene98499:CDS |
| GTATCTGCAGATTGAAGTGG+GGG | 0.601539 | 2.1:-45298292 | MS.gene98499:intron |
| CTTCGATGTACAATATTATG+GGG | 0.602132 | 2.1:-45299597 | MS.gene98499:CDS |
| AGGTATAATATGATAGAACA+AGG | 0.609572 | 2.1:-45298534 | MS.gene98499:CDS |
| TGCGAAATCCCGTATGACGA+AGG | 0.612662 | 2.1:-45299212 | MS.gene98499:CDS |
| GTGCATAATGAAAGTTGGGA+TGG | 0.614926 | 2.1:-45296881 | MS.gene98499:CDS |
| ATGGGAATCATTGATTTCAG+GGG | 0.615119 | 2.1:-45297317 | MS.gene98499:intron |
| ATCTGCAAATATTACCACAC+TGG | 0.620524 | 2.1:+45298919 | None:intergenic |
| TTTGTATCTGCAGATTGAAG+TGG | 0.623910 | 2.1:-45298295 | MS.gene98499:intron |
| AACACAACATTGAAATACTG+TGG | 0.632514 | 2.1:+45299554 | None:intergenic |
| AGTATTAAAATATGTCGATG+AGG | 0.637042 | 2.1:-45296765 | MS.gene98499:intron |
| ATTACCAGAGGGGACCCTGT+GGG | 0.641259 | 2.1:+45295914 | None:intergenic |
| GTGCTGCAATAGTGGACTCG+GGG | 0.644938 | 2.1:-45297534 | MS.gene98499:CDS |
| GATCCAATGGCAGAAGTAGG+TGG | 0.646273 | 2.1:-45298471 | MS.gene98499:CDS |
| TTTACAGGTTTATGTCAGGG+TGG | 0.650609 | 2.1:-45297559 | MS.gene98499:intron |
| TTACCAGAGGGGACCCTGTG+GGG | 0.651193 | 2.1:+45295915 | None:intergenic |
| GAGAGGCTCCCAAATCCAGT+TGG | 0.660493 | 2.1:-45296346 | MS.gene98499:CDS |
| TGTATCTGCAGATTGAAGTG+GGG | 0.691045 | 2.1:-45298293 | MS.gene98499:intron |
| CAGTGATGTTATTGAAACAG+TGG | 0.692257 | 2.1:-45296903 | MS.gene98499:CDS |
| GGTATAATATGATAGAACAA+GGG | 0.695867 | 2.1:-45298533 | MS.gene98499:CDS |
| TATTACCAGAGGGGACCCTG+TGG | 0.703309 | 2.1:+45295913 | None:intergenic |
| CCAAATGTGAATGTAATGTG+TGG | 0.707394 | 2.1:+45296286 | None:intergenic |
| ACAACATTGAAATACTGTGG+TGG | 0.711005 | 2.1:+45299557 | None:intergenic |
| ACAAAACCGCTATAGCACAC+AGG | 0.715098 | 2.1:+45295955 | None:intergenic |
| TTGGGAAAGTCACACCAGTG+TGG | 0.728601 | 2.1:-45298933 | MS.gene98499:intron |
| ATAAGTATGTATTACCAGAG+GGG | 0.771682 | 2.1:+45295904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTATATATTTCTTGAA+AGG | - | chr2.1:45297439-45297458 | MS.gene98499:intron | 15.0% |
| !! | TAAAAAACATCAGAATATAT+CGG | + | chr2.1:45296939-45296958 | None:intergenic | 15.0% |
| !!! | CTGTTTTATTTAAATTACAA+AGG | - | chr2.1:45298824-45298843 | MS.gene98499:intron | 15.0% |
| !! | AAATTTGAATTAATGAAGCA+CGG | + | chr2.1:45298415-45298434 | None:intergenic | 20.0% |
| !! | AATAAAAGTAAAGAATGACA+TGG | + | chr2.1:45297214-45297233 | None:intergenic | 20.0% |
| !! | CTAACTAAATTATACAAAAC+TGG | + | chr2.1:45297857-45297876 | None:intergenic | 20.0% |
| !! | TAACACTTCAAGAATTAAAA+GGG | - | chr2.1:45295837-45295856 | MS.gene98499:intron | 20.0% |
| !! | TTAACACTTCAAGAATTAAA+AGG | - | chr2.1:45295836-45295855 | MS.gene98499:intron | 20.0% |
| !! | TTGAAGTTTCAATACATTTA+GGG | - | chr2.1:45299061-45299080 | MS.gene98499:intron | 20.0% |
| !!! | AACTTGTGTAAATATTTTAC+AGG | - | chr2.1:45297956-45297975 | MS.gene98499:intron | 20.0% |
| !!! | ATAACTTTATTTATCCAATG+AGG | - | chr2.1:45299112-45299131 | MS.gene98499:intron | 20.0% |
| !!! | ATTTCATCTAAAATTTGGAT+AGG | + | chr2.1:45297881-45297900 | None:intergenic | 20.0% |
| !!! | CAATTCATGTGATTATATTT+TGG | - | chr2.1:45296884-45296903 | MS.gene98499:CDS | 20.0% |
| !!! | GATATATTCTGATGTTTTTT+AGG | - | chr2.1:45296938-45296957 | MS.gene98499:intron | 20.0% |
| !!! | TAACTTTTTGGATAATATTC+AGG | - | chr2.1:45296288-45296307 | MS.gene98499:CDS | 20.0% |
| !!! | TCTAAAATGACTTTATAAGT+GGG | - | chr2.1:45297810-45297829 | MS.gene98499:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+TGG | + | chr2.1:45298330-45298349 | None:intergenic | 20.0% |
| !!! | TTTAGAGTAAACATAGATAT+AGG | - | chr2.1:45298856-45298875 | MS.gene98499:intron | 20.0% |
| !!! | TTTCATCTAAAATTTGGATA+GGG | + | chr2.1:45297880-45297899 | None:intergenic | 20.0% |
| !!! | TTTGAAGTTTCAATACATTT+AGG | - | chr2.1:45299060-45299079 | MS.gene98499:intron | 20.0% |
| !!! | TTTTTGTAAAATTGCATCTT+CGG | - | chr2.1:45296113-45296132 | MS.gene98499:intron | 20.0% |
| ! | AAAAACATTGTCCATAACTA+CGG | - | chr2.1:45298181-45298200 | MS.gene98499:intron | 25.0% |
| ! | AAAGTTACCAATTTCGTTAT+AGG | + | chr2.1:45296219-45296238 | None:intergenic | 25.0% |
| ! | AACATAAAACACATGATTTG+AGG | + | chr2.1:45298991-45299010 | None:intergenic | 25.0% |
| ! | ACTTCGATGTACAATATTAT+GGG | - | chr2.1:45295932-45295951 | MS.gene98499:CDS | 25.0% |
| ! | AGGTATAATATGATAGAACA+AGG | - | chr2.1:45296996-45297015 | MS.gene98499:intron | 25.0% |
| ! | AGTATTAAAATATGTCGATG+AGG | - | chr2.1:45298765-45298784 | MS.gene98499:intron | 25.0% |
| ! | ATGCCTTTAATCTTAAGTAT+TGG | + | chr2.1:45296726-45296745 | None:intergenic | 25.0% |
| ! | ATGCTAAATAGAAATGCATA+AGG | + | chr2.1:45297293-45297312 | None:intergenic | 25.0% |
| ! | ATTAGACTTTGTTCAGATAA+TGG | - | chr2.1:45298503-45298522 | MS.gene98499:CDS | 25.0% |
| ! | ATTTACACAAGTTTATGTTG+TGG | + | chr2.1:45297949-45297968 | None:intergenic | 25.0% |
| ! | CTCATATATAAGATGAGATA+TGG | - | chr2.1:45297787-45297806 | MS.gene98499:intron | 25.0% |
| ! | CTTATATCGAATTGAATTCA+TGG | - | chr2.1:45296074-45296093 | MS.gene98499:intron | 25.0% |
| ! | GCTTATACAATTTCTAATGA+TGG | - | chr2.1:45295766-45295785 | MS.gene98499:CDS | 25.0% |
| ! | GGTATAATATGATAGAACAA+GGG | - | chr2.1:45296997-45297016 | MS.gene98499:intron | 25.0% |
| ! | GTACCAATACTTAAGATTAA+AGG | - | chr2.1:45296720-45296739 | MS.gene98499:intron | 25.0% |
| ! | TACTTCGATGTACAATATTA+TGG | - | chr2.1:45295931-45295950 | MS.gene98499:CDS | 25.0% |
| ! | TTGAAAATGAGTTCATAAGT+GGG | - | chr2.1:45297596-45297615 | MS.gene98499:intron | 25.0% |
| ! | TTTATAAATGATTGTCCAAC+TGG | + | chr2.1:45299202-45299221 | None:intergenic | 25.0% |
| !! | AAATTTTAGATGAAATACGC+TGG | - | chr2.1:45297885-45297904 | MS.gene98499:intron | 25.0% |
| !! | AGCGTATTTCATCTAAAATT+TGG | + | chr2.1:45297886-45297905 | None:intergenic | 25.0% |
| !! | ATATTTTACAGGTTTATGTC+AGG | - | chr2.1:45297967-45297986 | MS.gene98499:intron | 25.0% |
| !! | CTTTTGTAGTTTTTGCAATA+TGG | - | chr2.1:45298693-45298712 | MS.gene98499:intron | 25.0% |
| !! | GTCTAAAATGACTTTATAAG+TGG | - | chr2.1:45297809-45297828 | MS.gene98499:intron | 25.0% |
| !! | TATTTTACAGGTTTATGTCA+GGG | - | chr2.1:45297968-45297987 | MS.gene98499:intron | 25.0% |
| !!! | ATTATATTTTGGTTGCGATA+GGG | - | chr2.1:45296895-45296914 | MS.gene98499:CDS | 25.0% |
| !!! | TAAAGTTTTGTATGCTTCTT+TGG | - | chr2.1:45296449-45296468 | MS.gene98499:intron | 25.0% |
| !!! | TTAATCACTGCATGTTTTTT+AGG | + | chr2.1:45296964-45296983 | None:intergenic | 25.0% |
| !!! | TTATACAAAACTGGTTTGTA+AGG | + | chr2.1:45297848-45297867 | None:intergenic | 25.0% |
| !!! | TTTTAGAGATGATATACAGT+TGG | + | chr2.1:45298040-45298059 | None:intergenic | 25.0% |
| AAAATGACTTTATAAGTGGG+AGG | - | chr2.1:45297813-45297832 | MS.gene98499:intron | 30.0% | |
| AACACAACATTGAAATACTG+TGG | + | chr2.1:45295979-45295998 | None:intergenic | 30.0% | |
| AACATCACTGCAAGTAAAAT+TGG | + | chr2.1:45298617-45298636 | None:intergenic | 30.0% | |
| AACATTCATAGGAAGGAAAA+TGG | + | chr2.1:45299421-45299440 | None:intergenic | 30.0% | |
| ACAAGAACTAGTAAGAAGAA+AGG | + | chr2.1:45298095-45298114 | None:intergenic | 30.0% | |
| ACTAACACGAACTGAAAATT+TGG | + | chr2.1:45297672-45297691 | None:intergenic | 30.0% | |
| ACTCTATAACATTCATAGGA+AGG | + | chr2.1:45299428-45299447 | None:intergenic | 30.0% | |
| AGGAATCAAGAATAAGAAGA+TGG | + | chr2.1:45298554-45298573 | None:intergenic | 30.0% | |
| ATAACTACGGAAATTCGATA+TGG | - | chr2.1:45298194-45298213 | MS.gene98499:intron | 30.0% | |
| ATAAGTATGTATTACCAGAG+GGG | + | chr2.1:45299629-45299648 | None:intergenic | 30.0% | |
| ATATCGAATTTCCGTAGTTA+TGG | + | chr2.1:45298195-45298214 | None:intergenic | 30.0% | |
| ATGCACTCTATAACATTCAT+AGG | + | chr2.1:45299432-45299451 | None:intergenic | 30.0% | |
| ATGGTTAAATAAGGATCCAA+TGG | - | chr2.1:45297046-45297065 | MS.gene98499:CDS | 30.0% | |
| CAAGAACTAGTAAGAAGAAA+GGG | + | chr2.1:45298094-45298113 | None:intergenic | 30.0% | |
| CTAACACGAACTGAAAATTT+GGG | + | chr2.1:45297671-45297690 | None:intergenic | 30.0% | |
| CTACTTGCAAATAATACAAC+AGG | - | chr2.1:45297266-45297285 | MS.gene98499:intron | 30.0% | |
| CTTCGATGTACAATATTATG+GGG | - | chr2.1:45295933-45295952 | MS.gene98499:CDS | 30.0% | |
| CTTGAAAATGAGTTCATAAG+TGG | - | chr2.1:45297595-45297614 | MS.gene98499:intron | 30.0% | |
| GATAAGTATGTATTACCAGA+GGG | + | chr2.1:45299630-45299649 | None:intergenic | 30.0% | |
| GATTAAGCAAAGCAATGTAA+AGG | - | chr2.1:45298738-45298757 | MS.gene98499:intron | 30.0% | |
| GCAATTGTGTAGAACTAAAA+GGG | - | chr2.1:45297477-45297496 | MS.gene98499:intron | 30.0% | |
| GTACAATATTATGGGGAAAT+TGG | - | chr2.1:45295940-45295959 | MS.gene98499:CDS | 30.0% | |
| TAAAGAAACCAGATATGCTA+CGG | + | chr2.1:45299482-45299501 | None:intergenic | 30.0% | |
| TAAATGTATCCTTCGTCATA+CGG | + | chr2.1:45296330-45296349 | None:intergenic | 30.0% | |
| TAACTACGGAAATTCGATAT+GGG | - | chr2.1:45298195-45298214 | MS.gene98499:intron | 30.0% | |
| TACTTTCCAATTTCTCAAGA+GGG | - | chr2.1:45297134-45297153 | MS.gene98499:intron | 30.0% | |
| TAGTGATATATGTATGTGCA+GGG | - | chr2.1:45299738-45299757 | MS.gene98499:CDS | 30.0% | |
| TATGACGAAGGATACATTTA+TGG | - | chr2.1:45296330-45296349 | MS.gene98499:CDS | 30.0% | |
| TATTATGGGGAAATTGGTAT+TGG | - | chr2.1:45295946-45295965 | MS.gene98499:CDS | 30.0% | |
| TCTCAAATTATTAGTGGTGT+CGG | + | chr2.1:45298324-45298343 | None:intergenic | 30.0% | |
| TGATAAGTATGTATTACCAG+AGG | + | chr2.1:45299631-45299650 | None:intergenic | 30.0% | |
| TGCACATACATATATCACTA+CGG | + | chr2.1:45299738-45299757 | None:intergenic | 30.0% | |
| TGTTAAGTTAGATGTAGCTA+AGG | + | chr2.1:45298589-45298608 | None:intergenic | 30.0% | |
| TTACTTTCCAATTTCTCAAG+AGG | - | chr2.1:45297133-45297152 | MS.gene98499:intron | 30.0% | |
| TTGTTACATGTCTTTGGATT+TGG | - | chr2.1:45295731-45295750 | MS.gene98499:CDS | 30.0% | |
| TTTCTCCCTATGGTTAAATA+AGG | - | chr2.1:45297037-45297056 | MS.gene98499:CDS | 30.0% | |
| ! | GCATGCTTAAAGTAACTTTT+TGG | - | chr2.1:45296276-45296295 | MS.gene98499:CDS | 30.0% |
| ! | GTGTTTTATGTTCGTTAGTT+TGG | - | chr2.1:45298999-45299018 | MS.gene98499:CDS | 30.0% |
| ! | TAATCTGATTTTGCATCCAA+AGG | + | chr2.1:45298723-45298742 | None:intergenic | 30.0% |
| ! | TGGATCCTTATTTAACCATA+GGG | + | chr2.1:45297045-45297064 | None:intergenic | 30.0% |
| ! | TTGGATCCTTATTTAACCAT+AGG | + | chr2.1:45297046-45297065 | None:intergenic | 30.0% |
| !! | AAATGTTAAGAGTATCGCAT+TGG | - | chr2.1:45297561-45297580 | MS.gene98499:intron | 30.0% |
| !! | ATATGGGAATCATTGATTTC+AGG | - | chr2.1:45298211-45298230 | MS.gene98499:intron | 30.0% |
| !! | GAGAGTGTTGATACAAATTA+TGG | - | chr2.1:45295880-45295899 | MS.gene98499:intron | 30.0% |
| !! | GCTATTTTCATTCGAAGTAT+AGG | - | chr2.1:45296177-45296196 | MS.gene98499:intron | 30.0% |
| !! | TATGGGAATCATTGATTTCA+GGG | - | chr2.1:45298212-45298231 | MS.gene98499:intron | 30.0% |
| !!! | CTTACTAGTTCTTGTTTTCA+GGG | - | chr2.1:45298100-45298119 | MS.gene98499:intron | 30.0% |
| !!! | GATTATATTTTGGTTGCGAT+AGG | - | chr2.1:45296894-45296913 | MS.gene98499:CDS | 30.0% |
| !!! | TCTTACTAGTTCTTGTTTTC+AGG | - | chr2.1:45298099-45298118 | MS.gene98499:intron | 30.0% |
| !!! | TCTTTGGTTTTATTGATGTC+TGG | - | chr2.1:45296465-45296484 | MS.gene98499:intron | 30.0% |
| AAAGAATGCATGGTATTAGG+TGG | - | chr2.1:45297403-45297422 | MS.gene98499:CDS | 35.0% | |
| AAATGTATCCTTCGTCATAC+GGG | + | chr2.1:45296329-45296348 | None:intergenic | 35.0% | |
| AACAAATCCTTCTGTTCCAA+TGG | + | chr2.1:45298149-45298168 | None:intergenic | 35.0% | |
| AATGATTGTCCAACTGGATT+TGG | + | chr2.1:45299196-45299215 | None:intergenic | 35.0% | |
| ACAACATTGAAATACTGTGG+TGG | + | chr2.1:45295976-45295995 | None:intergenic | 35.0% | |
| ACTCAAATTAACCATGCCAT+TGG | - | chr2.1:45298130-45298149 | MS.gene98499:intron | 35.0% | |
| AGCCAAGACAATGTAAAAGT+TGG | - | chr2.1:45296360-45296379 | MS.gene98499:intron | 35.0% | |
| AGCTAAGGAATGTGTCATAA+AGG | + | chr2.1:45298574-45298593 | None:intergenic | 35.0% | |
| AGTCCAAGTATACCATCAAA+TGG | + | chr2.1:45296557-45296576 | None:intergenic | 35.0% | |
| AGTGGTGCATAATGAAAGTT+GGG | - | chr2.1:45298645-45298664 | MS.gene98499:intron | 35.0% | |
| ATCTGCAAATATTACCACAC+TGG | + | chr2.1:45296614-45296633 | None:intergenic | 35.0% | |
| ATGATTGTCCAACTGGATTT+GGG | + | chr2.1:45299195-45299214 | None:intergenic | 35.0% | |
| ATGTCAGCACATAAGATTTC+AGG | + | chr2.1:45298485-45298504 | None:intergenic | 35.0% | |
| CAAAAGAGACTCTCTCTTAA+TGG | + | chr2.1:45298679-45298698 | None:intergenic | 35.0% | |
| CAATAACCCTCTTGAGAAAT+TGG | + | chr2.1:45297143-45297162 | None:intergenic | 35.0% | |
| CAATTTCTCAAGAGGGTTAT+TGG | - | chr2.1:45297141-45297160 | MS.gene98499:intron | 35.0% | |
| CAGATTCTGCAAATCCTATA+CGG | + | chr2.1:45299819-45299838 | None:intergenic | 35.0% | |
| CAGTGATGTTATTGAAACAG+TGG | - | chr2.1:45298627-45298646 | MS.gene98499:intron | 35.0% | |
| CCAAATGTGAATGTAATGTG+TGG | + | chr2.1:45299247-45299266 | None:intergenic | 35.0% | |
| CCAAGACAATGTAAAAGTTG+GGG | - | chr2.1:45296362-45296381 | MS.gene98499:intron | 35.0% | |
| CCACACATTACATTCACATT+TGG | - | chr2.1:45299244-45299263 | MS.gene98499:intron | 35.0% | |
| CTAGTACTAATCTGAGAAAG+TGG | + | chr2.1:45296820-45296839 | None:intergenic | 35.0% | |
| CTTGAAATACAAACCTGTTC+TGG | + | chr2.1:45299292-45299311 | None:intergenic | 35.0% | |
| GAACATACTGAGAAGGAAAA+AGG | + | chr2.1:45299523-45299542 | None:intergenic | 35.0% | |
| GAGAAATTGGAAAGTAAGTG+TGG | + | chr2.1:45297130-45297149 | None:intergenic | 35.0% | |
| GATTTCAGGATGTTTCAGTT+GGG | - | chr2.1:45296579-45296598 | MS.gene98499:intron | 35.0% | |
| GCCAAGACAATGTAAAAGTT+GGG | - | chr2.1:45296361-45296380 | MS.gene98499:intron | 35.0% | |
| GCTAAAGAATGCATGGTATT+AGG | - | chr2.1:45297400-45297419 | MS.gene98499:CDS | 35.0% | |
| GGCAATTGTGTAGAACTAAA+AGG | - | chr2.1:45297476-45297495 | MS.gene98499:intron | 35.0% | |
| GTAGTGATATATGTATGTGC+AGG | - | chr2.1:45299737-45299756 | MS.gene98499:CDS | 35.0% | |
| GTGTGTATCCAAAATACGTT+AGG | - | chr2.1:45297690-45297709 | MS.gene98499:intron | 35.0% | |
| TATAAACTGCAGTAGTGTCT+CGG | - | chr2.1:45299216-45299235 | MS.gene98499:CDS | 35.0% | |
| TATACTTGGACTTGGATTTC+AGG | - | chr2.1:45296565-45296584 | MS.gene98499:intron | 35.0% | |
| TCTAGCACCTATAACGAAAT+TGG | - | chr2.1:45296209-45296228 | MS.gene98499:intron | 35.0% | |
| TCTTTGATTGCGTCTTCTAT+TGG | + | chr2.1:45299037-45299056 | None:intergenic | 35.0% | |
| TGAAGTTGCTAAAGAATGCA+TGG | - | chr2.1:45297393-45297412 | MS.gene98499:CDS | 35.0% | |
| TGACTAGCAAAAGACACTTT+CGG | + | chr2.1:45298929-45298948 | None:intergenic | 35.0% | |
| TTCAATGTTGTGTTTGACAC+TGG | - | chr2.1:45295985-45296004 | MS.gene98499:CDS | 35.0% | |
| TTGTATCTGCAGATTGAAGT+GGG | - | chr2.1:45297236-45297255 | MS.gene98499:intron | 35.0% | |
| TTTCATTCGAAGTATAGGTC+CGG | - | chr2.1:45296182-45296201 | MS.gene98499:intron | 35.0% | |
| TTTGCAATATGGTTGTCCTT+TGG | - | chr2.1:45298704-45298723 | MS.gene98499:intron | 35.0% | |
| TTTGTATCTGCAGATTGAAG+TGG | - | chr2.1:45297235-45297254 | MS.gene98499:intron | 35.0% | |
| ! | ACTCTAAGAACATACTGAGA+AGG | + | chr2.1:45299530-45299549 | None:intergenic | 35.0% |
| ! | AGGAATTTTGCGAGATTACA+AGG | - | chr2.1:45296504-45296523 | MS.gene98499:intron | 35.0% |
| ! | CTTCCATTTGATGGTATACT+TGG | - | chr2.1:45296551-45296570 | MS.gene98499:intron | 35.0% |
| ! | GGAATTTTGCGAGATTACAA+GGG | - | chr2.1:45296505-45296524 | MS.gene98499:intron | 35.0% |
| ! | TGATTTCGTAGGTTTGAGTT+AGG | - | chr2.1:45297640-45297659 | MS.gene98499:intron | 35.0% |
| ! | TGTTGGAGATATTTTCTTGC+AGG | - | chr2.1:45299762-45299781 | MS.gene98499:CDS | 35.0% |
| ! | TTGGATTTGGTCTCTATCTT+TGG | - | chr2.1:45295744-45295763 | MS.gene98499:CDS | 35.0% |
| ! | TTTGATGGTATACTTGGACT+TGG | - | chr2.1:45296557-45296576 | MS.gene98499:intron | 35.0% |
| !! | ATGGGAATCATTGATTTCAG+GGG | - | chr2.1:45298213-45298232 | MS.gene98499:intron | 35.0% |
| !! | GATAGAACAAGGGCATATTT+TGG | - | chr2.1:45297007-45297026 | MS.gene98499:intron | 35.0% |
| !! | TGAAAGGCATTCAATTTCCA+TGG | - | chr2.1:45297455-45297474 | MS.gene98499:intron | 35.0% |
| !! | TTAGTTCTACACAATTGCCA+TGG | + | chr2.1:45297475-45297494 | None:intergenic | 35.0% |
| !!! | CTTTTAGCTCTTCCATTTGA+TGG | - | chr2.1:45296542-45296561 | MS.gene98499:intron | 35.0% |
| AAAGCTTCTGAGTTCCTCAT+TGG | + | chr2.1:45299129-45299148 | None:intergenic | 40.0% | |
| ATATGTATGTGCAGGGTTGT+TGG | - | chr2.1:45299745-45299764 | MS.gene98499:CDS | 40.0% | |
| ATGAACATGAGTGCCAACAA+CGG | + | chr2.1:45297913-45297932 | None:intergenic | 40.0% | |
| CACATGTGTCAGTGTAGTAT+CGG | + | chr2.1:45296781-45296800 | None:intergenic | 40.0% | |
| CAGTGGTGCATAATGAAAGT+TGG | - | chr2.1:45298644-45298663 | MS.gene98499:intron | 40.0% | |
| CTTCAGATGTCAAGTCTAGA+GGG | - | chr2.1:45297743-45297762 | MS.gene98499:intron | 40.0% | |
| GAATGTATCCGTAGCATATC+TGG | - | chr2.1:45299471-45299490 | MS.gene98499:intron | 40.0% | |
| GACTAGCAAAAGACACTTTC+GGG | + | chr2.1:45298928-45298947 | None:intergenic | 40.0% | |
| GAGAAGATGCATCTTGAAGA+TGG | + | chr2.1:45296030-45296049 | None:intergenic | 40.0% | |
| GAGACTAACAGAAATTCACG+TGG | + | chr2.1:45299351-45299370 | None:intergenic | 40.0% | |
| GAGATGATATACAGTTGGAC+CGG | + | chr2.1:45298035-45298054 | None:intergenic | 40.0% | |
| GCATGGTATTAGGTGGTTAA+TGG | - | chr2.1:45297410-45297429 | MS.gene98499:CDS | 40.0% | |
| GGATTTCAGGATGTTTCAGT+TGG | - | chr2.1:45296578-45296597 | MS.gene98499:intron | 40.0% | |
| GTGCATAATGAAAGTTGGGA+TGG | - | chr2.1:45298649-45298668 | MS.gene98499:intron | 40.0% | |
| GTTATAGGTGCTAGATATCC+CGG | + | chr2.1:45296204-45296223 | None:intergenic | 40.0% | |
| TGCAAATCCTATACGGAGAT+TGG | + | chr2.1:45299812-45299831 | None:intergenic | 40.0% | |
| TGTATCTGCAGATTGAAGTG+GGG | - | chr2.1:45297237-45297256 | MS.gene98499:intron | 40.0% | |
| TTCATTCGAAGTATAGGTCC+GGG | - | chr2.1:45296183-45296202 | MS.gene98499:intron | 40.0% | |
| TTTACAGGTTTATGTCAGGG+TGG | - | chr2.1:45297971-45297990 | MS.gene98499:intron | 40.0% | |
| ! | CCCCAACTTTTACATTGTCT+TGG | + | chr2.1:45296365-45296384 | None:intergenic | 40.0% |
| ! | GTGTCTTTTGCTAGTCAGTT+TGG | - | chr2.1:45298932-45298951 | MS.gene98499:intron | 40.0% |
| ! | TGCTGGTTGTTACATGTCTT+TGG | - | chr2.1:45295725-45295744 | MS.gene98499:CDS | 40.0% |
| ! | TGGACAAAGTTTTCTCCCTA+TGG | - | chr2.1:45297027-45297046 | MS.gene98499:CDS | 40.0% |
| ! | TTTTGCGAGATTACAAGGGA+AGG | - | chr2.1:45296509-45296528 | MS.gene98499:intron | 40.0% |
| !! | ACACTGGTAGCTCTAATCTT+TGG | - | chr2.1:45296001-45296020 | MS.gene98499:intron | 40.0% |
| !! | CAAAACTGGTTTGTAAGGTG+AGG | + | chr2.1:45297843-45297862 | None:intergenic | 40.0% |
| !! | CACTGGTAGCTCTAATCTTT+GGG | - | chr2.1:45296002-45296021 | MS.gene98499:intron | 40.0% |
| !! | GTGATTAAGTCTGTTTCTGC+AGG | - | chr2.1:45296976-45296995 | MS.gene98499:intron | 40.0% |
| !!! | CTGGTTGCTTTTCATCATTC+AGG | - | chr2.1:45296484-45296503 | MS.gene98499:intron | 40.0% |
| !!! | GTGGACAAGAAGCATTTTAG+AGG | - | chr2.1:45297101-45297120 | MS.gene98499:intron | 40.0% |
| !!! | TTGTTTTAAAGCTGTGCGAG+AGG | - | chr2.1:45299167-45299186 | MS.gene98499:CDS | 40.0% |
| AACCATGCCATTGGAACAGA+AGG | - | chr2.1:45298139-45298158 | MS.gene98499:intron | 45.0% | |
| AAGGATCCAATGGCAGAAGT+AGG | - | chr2.1:45297056-45297075 | MS.gene98499:CDS | 45.0% | |
| ACAAAACCGCTATAGCACAC+AGG | + | chr2.1:45299578-45299597 | None:intergenic | 45.0% | |
| ACAAAGCACGGATACGAACA+CGG | - | chr2.1:45298287-45298306 | MS.gene98499:intron | 45.0% | |
| ACCTACGAAATCAGCTCGTA+AGG | + | chr2.1:45297633-45297652 | None:intergenic | 45.0% | |
| ACGAAATCAGCTCGTAAGGT+TGG | + | chr2.1:45297629-45297648 | None:intergenic | 45.0% | |
| ACTCGAGGAAACATGATAGC+GGG | + | chr2.1:45297719-45297738 | None:intergenic | 45.0% | |
| ATCAATGTCAATGTCGTGCG+TGG | - | chr2.1:45296849-45296868 | MS.gene98499:CDS | 45.0% | |
| ATCCTTCTGTTCCAATGGCA+TGG | + | chr2.1:45298144-45298163 | None:intergenic | 45.0% | |
| ATGTCAAGTCTAGAGGGTGA+TGG | - | chr2.1:45297749-45297768 | MS.gene98499:intron | 45.0% | |
| CACTCATGCTATTCACTCAC+AGG | + | chr2.1:45297366-45297385 | None:intergenic | 45.0% | |
| CGAAATCAGCTCGTAAGGTT+GGG | + | chr2.1:45297628-45297647 | None:intergenic | 45.0% | |
| CGATACTACACTGACACATG+TGG | - | chr2.1:45296779-45296798 | MS.gene98499:CDS | 45.0% | |
| GACTATCCACCTACAAAGCA+CGG | - | chr2.1:45298275-45298294 | MS.gene98499:CDS | 45.0% | |
| GACTCGAGGAAACATGATAG+CGG | + | chr2.1:45297720-45297739 | None:intergenic | 45.0% | |
| GCTTCAGATGTCAAGTCTAG+AGG | - | chr2.1:45297742-45297761 | MS.gene98499:intron | 45.0% | |
| GTAGGTGGTGAGATTGTCTT+TGG | - | chr2.1:45297074-45297093 | MS.gene98499:intron | 45.0% | |
| GTATCTGCAGATTGAAGTGG+GGG | - | chr2.1:45297238-45297257 | MS.gene98499:intron | 45.0% | |
| TCGGGGACTACTTTAATTGC+CGG | - | chr2.1:45298013-45298032 | MS.gene98499:intron | 45.0% | |
| TGTCAAGTCTAGAGGGTGAT+GGG | - | chr2.1:45297750-45297769 | MS.gene98499:intron | 45.0% | |
| TGTTCGTATCCGTGCTTTGT+AGG | + | chr2.1:45298287-45298306 | None:intergenic | 45.0% | |
| TGTTCTCCTGTGTGCTATAG+CGG | - | chr2.1:45299569-45299588 | MS.gene98499:CDS | 45.0% | |
| TTCTCAAGAGGGTTATTGGC+AGG | - | chr2.1:45297145-45297164 | MS.gene98499:intron | 45.0% | |
| ! | ACCTTACGAGCTGATTTCGT+AGG | - | chr2.1:45297629-45297648 | MS.gene98499:intron | 45.0% |
| !! | TGAGATTGTCTTTGGTGGTG+TGG | - | chr2.1:45297082-45297101 | MS.gene98499:intron | 45.0% |
| GACTACGCCAATCTCCGTAT+AGG | - | chr2.1:45299802-45299821 | MS.gene98499:CDS | 50.0% | |
| GATCCAATGGCAGAAGTAGG+TGG | - | chr2.1:45297059-45297078 | MS.gene98499:intron | 50.0% | |
| GGTGGTGAGATTGTCTTTGG+TGG | - | chr2.1:45297077-45297096 | MS.gene98499:intron | 50.0% | |
| GTTTCCTCTCTCTCCAGAAC+AGG | - | chr2.1:45299276-45299295 | MS.gene98499:intron | 50.0% | |
| TATGTGTCAGTGTCCGACAC+CGG | - | chr2.1:45298366-45298385 | MS.gene98499:intron | 50.0% | |
| TCACCACCTACTTCTGCCAT+TGG | + | chr2.1:45297065-45297084 | None:intergenic | 50.0% | |
| TCGTATCCGTGCTTTGTAGG+TGG | + | chr2.1:45298284-45298303 | None:intergenic | 50.0% | |
| TCGTCATACGGGATTTCGCA+TGG | + | chr2.1:45296318-45296337 | None:intergenic | 50.0% | |
| TGCGAAATCCCGTATGACGA+AGG | - | chr2.1:45296318-45296337 | MS.gene98499:CDS | 50.0% | |
| TTGGGAAAGTCACACCAGTG+TGG | - | chr2.1:45296597-45296616 | MS.gene98499:intron | 50.0% | |
| ! | CTCGAGGAAACATGATAGCG+GGG | + | chr2.1:45297718-45297737 | None:intergenic | 50.0% |
| ! | GACATCTGAAGCATGACTCG+AGG | + | chr2.1:45297734-45297753 | None:intergenic | 50.0% |
| !! | AAATACGCTGGTGCCGTTGT+TGG | - | chr2.1:45297897-45297916 | MS.gene98499:intron | 50.0% |
| !! | CAAACCTGTTCTGGAGAGAG+AGG | + | chr2.1:45299283-45299302 | None:intergenic | 50.0% |
| !! | CTGTGCTGCAATAGTGGACT+CGG | - | chr2.1:45297994-45298013 | MS.gene98499:intron | 50.0% |
| !! | TCGAGGAAACATGATAGCGG+GGG | + | chr2.1:45297717-45297736 | None:intergenic | 50.0% |
| !! | TGTGCTGCAATAGTGGACTC+GGG | - | chr2.1:45297995-45298014 | MS.gene98499:intron | 50.0% |
| AATTAGGCGTGTCCCGGTGT+CGG | + | chr2.1:45298382-45298401 | None:intergenic | 55.0% | |
| ATGTGTCAGTGTCCGACACC+GGG | - | chr2.1:45298367-45298386 | MS.gene98499:intron | 55.0% | |
| ATTACCAGAGGGGACCCTGT+GGG | + | chr2.1:45299619-45299638 | None:intergenic | 55.0% | |
| CACTGACACGTGACAGAGAC+TGG | + | chr2.1:45296751-45296770 | None:intergenic | 55.0% | |
| CTTGATGTGCCTTCCCCACA+GGG | - | chr2.1:45299602-45299621 | MS.gene98499:CDS | 55.0% | |
| GAGAGGCTCCCAAATCCAGT+TGG | - | chr2.1:45299184-45299203 | MS.gene98499:CDS | 55.0% | |
| GCACGGACACTCCTCGAATT+AGG | + | chr2.1:45298398-45298417 | None:intergenic | 55.0% | |
| TATTACCAGAGGGGACCCTG+TGG | + | chr2.1:45299620-45299639 | None:intergenic | 55.0% | |
| TCCTCGAATTAGGCGTGTCC+CGG | + | chr2.1:45298388-45298407 | None:intergenic | 55.0% | |
| TCTTGATGTGCCTTCCCCAC+AGG | - | chr2.1:45299601-45299620 | MS.gene98499:CDS | 55.0% | |
| !! | CGAGGAAACATGATAGCGGG+GGG | + | chr2.1:45297716-45297735 | None:intergenic | 55.0% |
| !! | GTGCTGCAATAGTGGACTCG+GGG | - | chr2.1:45297996-45298015 | MS.gene98499:intron | 55.0% |
| ACCGGGACACGCCTAATTCG+AGG | - | chr2.1:45298384-45298403 | MS.gene98499:intron | 60.0% | |
| GGGTGGCTGTGCTGCAATAG+TGG | - | chr2.1:45297988-45298007 | MS.gene98499:intron | 60.0% | |
| TTACCAGAGGGGACCCTGTG+GGG | + | chr2.1:45299618-45299637 | None:intergenic | 60.0% | |
| ! | GCGGGGGGCCTAACGTATTT+TGG | + | chr2.1:45297701-45297720 | None:intergenic | 60.0% |
| CAGAGGGGACCCTGTGGGGA+AGG | + | chr2.1:45299614-45299633 | None:intergenic | 70.0% | |
| CTTCCCCACAGGGTCCCCTC+TGG | - | chr2.1:45299612-45299631 | MS.gene98499:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 45295709 | 45299843 | 45295709 | ID=MS.gene98499 |
| chr2.1 | mRNA | 45295709 | 45299843 | 45295709 | ID=MS.gene98499.t1;Parent=MS.gene98499 |
| chr2.1 | exon | 45299502 | 45299843 | 45299502 | ID=MS.gene98499.t1.exon1;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45299502 | 45299843 | 45299502 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45299322 | 45299382 | 45299322 | ID=MS.gene98499.t1.exon2;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45299322 | 45299382 | 45299322 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45299148 | 45299242 | 45299148 | ID=MS.gene98499.t1.exon3;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45299148 | 45299242 | 45299148 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45298934 | 45299046 | 45298934 | ID=MS.gene98499.t1.exon4;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45298934 | 45299046 | 45298934 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45298386 | 45298554 | 45298386 | ID=MS.gene98499.t1.exon5;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45298386 | 45298554 | 45298386 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45298265 | 45298304 | 45298265 | ID=MS.gene98499.t1.exon6;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45298265 | 45298304 | 45298265 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45297510 | 45297574 | 45297510 | ID=MS.gene98499.t1.exon7;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45297510 | 45297574 | 45297510 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45297318 | 45297431 | 45297318 | ID=MS.gene98499.t1.exon8;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45297318 | 45297431 | 45297318 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45297012 | 45297076 | 45297012 | ID=MS.gene98499.t1.exon9;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45297012 | 45297076 | 45297012 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45296766 | 45296922 | 45296766 | ID=MS.gene98499.t1.exon10;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45296766 | 45296922 | 45296766 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45296255 | 45296374 | 45296255 | ID=MS.gene98499.t1.exon11;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45296255 | 45296374 | 45296255 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45295919 | 45296016 | 45295919 | ID=MS.gene98499.t1.exon12;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45295919 | 45296016 | 45295919 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| chr2.1 | exon | 45295709 | 45295793 | 45295709 | ID=MS.gene98499.t1.exon13;Parent=MS.gene98499.t1 |
| chr2.1 | CDS | 45295709 | 45295793 | 45295709 | ID=cds.MS.gene98499.t1;Parent=MS.gene98499.t1 |
| Gene Sequence |
| Protein sequence |
