AlfalfaGEDB | MS.gene98613

M. sativa cultivar XinJiangDaYe / MS.gene98613

KEGG: -
GO: -
PFAM: PF03168.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98613.t1	XP_003606085.1	92.2	219	16	1	1	218	1	219	1.60E-103	385.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98613.t1	Q9SRN0	47.7	218	103	3	3	218	1	209	7.4e-54	211.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98613.t1	G7JH86	92.2	219	16	1	1	218	1	219	1.1e-103	385.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049989	MS.gene98613	0.815825	7.58E-52	-1.69E-46
MS.gene055957	MS.gene98613	0.804283	2.33E-49	-1.69E-46
MS.gene056228	MS.gene98613	0.801545	8.56E-49	-1.69E-46
MS.gene06057	MS.gene98613	0.820402	6.99E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98613.t1	MTR_4g051880	95.434	219	9	1	1	218	1	219	4.19e-143	398
MS.gene98613.t1	MTR_2g086790	64.384	219	74	2	4	218	3	221	2.68e-105	303
MS.gene98613.t1	MTR_7g106050	49.315	219	101	3	1	218	1	210	1.80e-77	232
MS.gene98613.t1	MTR_1g057420	50.909	220	95	3	1	218	1	209	1.58e-69	211
MS.gene98613.t1	MTR_7g106080	55.660	106	45	2	114	218	7	111	8.50e-37	125
MS.gene98613.t1	MTR_3g092790	38.926	149	82	1	43	191	49	188	1.75e-35	125
MS.gene98613.t1	MTR_7g118270	31.447	159	101	1	27	185	53	203	3.48e-24	96.3
MS.gene98613.t1	MTR_8g024250	31.690	142	89	1	44	185	122	255	9.93e-20	85.5
MS.gene98613.t1	MTR_4g119428	29.861	144	91	3	30	172	65	199	1.61e-15	73.2
MS.gene98613.t1	MTR_3g063310	30.899	178	112	4	34	210	83	250	3.61e-15	72.4
MS.gene98613.t1	MTR_5g087760	29.697	165	109	2	27	189	75	234	1.73e-14	70.5
MS.gene98613.t1	MTR_2g011350	22.424	165	118	3	33	196	37	192	3.64e-14	68.9
MS.gene98613.t1	MTR_1g057400	27.742	155	99	4	26	175	27	173	7.35e-14	68.2
MS.gene98613.t1	MTR_6g071410	29.560	159	95	6	28	180	19	166	1.46e-12	64.7
MS.gene98613.t1	MTR_6g070890	29.560	159	95	6	28	180	19	166	1.46e-12	64.7
MS.gene98613.t1	MTR_6g471090	26.506	166	108	5	19	180	9	164	2.10e-12	64.3
MS.gene98613.t1	MTR_7g106010	28.485	165	103	3	26	185	45	199	2.65e-12	64.3
MS.gene98613.t1	MTR_1g105570	25.444	169	115	4	26	193	57	215	4.15e-12	63.5
MS.gene98613.t1	MTR_7g106000	25.424	177	119	3	26	198	48	215	4.97e-12	63.5
MS.gene98613.t1	MTR_1g057270	31.356	118	65	3	36	153	73	174	3.37e-11	61.2
MS.gene98613.t1	MTR_6g471080	34.513	113	64	2	19	131	6	108	6.86e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98613.t1	AT3G44220	53.670	218	89	3	1	218	1	206	1.35e-82	244
MS.gene98613.t1	AT3G11660	52.315	216	96	3	3	218	1	209	2.73e-79	236
MS.gene98613.t1	AT3G52470	47.907	215	103	2	4	218	3	208	4.50e-74	223
MS.gene98613.t1	AT2G35960	47.489	219	105	3	1	218	1	210	5.29e-67	205
MS.gene98613.t1	AT5G06330	45.872	218	107	4	1	218	1	207	1.51e-62	194
MS.gene98613.t1	AT4G09590	42.922	219	114	3	1	217	1	210	2.51e-62	193
MS.gene98613.t1	AT2G35970	43.379	219	113	3	1	217	1	210	5.09e-62	192
MS.gene98613.t1	AT5G22200	47.778	180	82	3	39	218	43	210	5.72e-59	185
MS.gene98613.t1	AT5G53730	37.267	161	95	1	31	191	38	192	4.77e-41	139
MS.gene98613.t1	AT4G01410	33.824	204	119	3	16	218	39	227	1.45e-34	123
MS.gene98613.t1	AT5G05657	41.985	131	64	5	41	169	12	132	1.69e-24	94.4
MS.gene98613.t1	AT2G35980	27.108	166	112	3	21	185	42	199	2.38e-17	77.8
MS.gene98613.t1	AT5G06320	25.731	171	118	3	29	198	57	219	2.84e-16	75.1
MS.gene98613.t1	AT5G22870	25.989	177	112	5	17	185	20	185	6.39e-16	73.6
MS.gene98613.t1	AT1G61760	25.000	176	122	4	19	193	42	208	6.83e-14	68.6
MS.gene98613.t1	AT3G11650	26.797	153	99	5	26	174	61	204	8.57e-14	68.6
MS.gene98613.t1	AT1G65690	28.351	194	117	6	20	210	76	250	6.48e-13	66.2
MS.gene98613.t1	AT4G05220	24.561	171	116	3	19	185	41	202	1.52e-12	64.7

Find 73 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAAGATGGTTAGGAGTATT+AGG	0.237388	4.2:+50197213	None:intergenic
TCAGAATAATGGAATGGTTT+TGG	0.280643	4.2:-50196847	MS.gene98613:CDS
TGAGTGTGACTTGCATTGTT+AGG	0.287525	4.2:+50197072	None:intergenic
TCCTAACCATCTTCCTAATA+TGG	0.288914	4.2:-50197205	MS.gene98613:CDS
TGAAGATTGCTTAGCGTAAA+AGG	0.309792	4.2:+50196876	None:intergenic
GTGGGGAAGGGAGAGGAATT+TGG	0.310217	4.2:+50197110	None:intergenic
ATTTGGTCGCCGTTTATTTA+CGG	0.314922	4.2:-50196918	MS.gene98613:CDS
TTATGACCTTGGTAAGTATC+AGG	0.316697	4.2:+50196951	None:intergenic
CACAACCCTAACAACAAAAT+AGG	0.320684	4.2:-50197044	MS.gene98613:CDS
AGGGTTAGTGTGTTGGGTGT+GGG	0.321269	4.2:+50197092	None:intergenic
TTGGTTAATATTAAGGTTAA+TGG	0.333355	4.2:-50196828	MS.gene98613:CDS
TGAACTGTCCTGCTTATGTT+AGG	0.340610	4.2:-50196752	MS.gene98613:CDS
TAGTGTGTTGGGTGTGGGGA+AGG	0.343825	4.2:+50197097	None:intergenic
TAGGGTTAGTGTGTTGGGTG+TGG	0.349726	4.2:+50197091	None:intergenic
CTTCAGCAGGATCAGAATAA+TGG	0.360367	4.2:-50196858	MS.gene98613:CDS
CAACTCCGGCGCCATTATTC+CGG	0.373049	4.2:+50196718	None:intergenic
TTCTCCGGTGACCGGAATAA+TGG	0.373901	4.2:-50196729	MS.gene98613:CDS
TTAAGTGGAGGGTTGGAAGT+TGG	0.386817	4.2:-50196800	MS.gene98613:CDS
GTAAATAAACGGCGACCAAA+TGG	0.389274	4.2:+50196920	None:intergenic
CTTAGCGTAAAAGGCGAAAC+CGG	0.402202	4.2:+50196885	None:intergenic
GGGTTAGTGTGTTGGGTGTG+GGG	0.419852	4.2:+50197093	None:intergenic
CATTGTTAGGGTTAGTGTGT+TGG	0.420943	4.2:+50197085	None:intergenic
ATTGTTAGGGTTAGTGTGTT+GGG	0.425697	4.2:+50197086	None:intergenic
AGAGATGTTGAAAGTGTAAA+TGG	0.427163	4.2:+50197136	None:intergenic
TATTTACGGTGTTGGCGTGC+CGG	0.431207	4.2:-50196904	MS.gene98613:CDS
AGTGTGTTGGGTGTGGGGAA+GGG	0.436307	4.2:+50197098	None:intergenic
GTCTAAGGATGATCCATATT+AGG	0.447285	4.2:+50197192	None:intergenic
TACGCTAAGCAATCTTCAGC+AGG	0.449107	4.2:-50196871	MS.gene98613:CDS
TAAGTATCAGGAATTGAAGT+TGG	0.450914	4.2:+50196963	None:intergenic
GAGTGTGACTTGCATTGTTA+GGG	0.451798	4.2:+50197073	None:intergenic
TCGCCGTTTATTTACGGTGT+TGG	0.452796	4.2:-50196912	MS.gene98613:CDS
CCTGCTTATGTTAGGTTCTC+CGG	0.456083	4.2:-50196744	MS.gene98613:CDS
AGGGTTGGAAGTTGGATCTC+TGG	0.457956	4.2:-50196792	MS.gene98613:CDS
GTGGTGGCCACATTCTTTGA+TGG	0.475516	4.2:+50197295	None:intergenic
ACGCCAACACCGTAAATAAA+CGG	0.479814	4.2:+50196909	None:intergenic
TGGTAAAATCTTTATGACCT+TGG	0.480324	4.2:+50196940	None:intergenic
GTTGGGTGTGGGGAAGGGAG+AGG	0.493546	4.2:+50197103	None:intergenic
TAATGGAAGGGTTAAGTGGA+GGG	0.496786	4.2:-50196811	MS.gene98613:CDS
AGGTTAATGGAAGGGTTAAG+TGG	0.499357	4.2:-50196815	MS.gene98613:CDS
ATGTTAGGTTCTCCGGTGAC+CGG	0.499487	4.2:-50196737	MS.gene98613:CDS
GGAAGGGTTAAGTGGAGGGT+TGG	0.508374	4.2:-50196807	MS.gene98613:CDS
TAGGAGAATGAAGGCTCCTA+CGG	0.524827	4.2:+50197232	None:intergenic
GATGATCCATATTAGGAAGA+TGG	0.526790	4.2:+50197199	None:intergenic
CGCCGGAGTTGTTGCTCCGG+CGG	0.527356	4.2:-50196706	MS.gene98613:CDS
AAGTGTAAATGGTGGCATCT+TGG	0.532549	4.2:+50197147	None:intergenic
TAATATTAAGGTTAATGGAA+GGG	0.537285	4.2:-50196823	MS.gene98613:CDS
TTAATATTAAGGTTAATGGA+AGG	0.543936	4.2:-50196824	MS.gene98613:CDS
GCCACATTCTTTGATGGACA+TGG	0.546034	4.2:+50197301	None:intergenic
TCCATATTAGGAAGATGGTT+AGG	0.549303	4.2:+50197204	None:intergenic
CGGCTGCAATTATGCGGCGG+AGG	0.553168	4.2:+50197252	None:intergenic
CCGGAGAACCTAACATAAGC+AGG	0.558411	4.2:+50196744	None:intergenic
GGCGCCATTATTCCGGTCAC+CGG	0.569600	4.2:+50196725	None:intergenic
TGGCGCCGGAGTTGTTGCTC+CGG	0.570074	4.2:-50196709	MS.gene98613:CDS
TAGGAGTATTAGGAGAATGA+AGG	0.580938	4.2:+50197223	None:intergenic
TTATGCGGCGGAGGTTGCCA+CGG	0.590516	4.2:+50197261	None:intergenic
GCAGGATCAGAATAATGGAA+TGG	0.594421	4.2:-50196853	MS.gene98613:CDS
AACCGCCGGAGCAACAACTC+CGG	0.597861	4.2:+50196704	None:intergenic
CTACGGCTGCAATTATGCGG+CGG	0.605674	4.2:+50197249	None:intergenic
AAAAGCTGAAACTTAACCGC+CGG	0.610815	4.2:+50196690	None:intergenic
CACGGTCTTCGTCGTCGTGG+TGG	0.611804	4.2:+50197279	None:intergenic
CTCCTACGGCTGCAATTATG+CGG	0.616209	4.2:+50197246	None:intergenic
GGTGACCGGAATAATGGCGC+CGG	0.617772	4.2:-50196723	MS.gene98613:CDS
CGCCGCATAATTGCAGCCGT+AGG	0.623994	4.2:-50197248	MS.gene98613:CDS
TTAATGGAAGGGTTAAGTGG+AGG	0.631865	4.2:-50196812	MS.gene98613:CDS
AAGTTGGTAGTGAGATCTGT+TGG	0.633316	4.2:+50196979	None:intergenic
TGCCACGGTCTTCGTCGTCG+TGG	0.636254	4.2:+50197276	None:intergenic
ACCATGTCCATCAAAGAATG+TGG	0.642277	4.2:-50197302	MS.gene98613:CDS
TTGGAAGTTGGATCTCTGGA+AGG	0.643048	4.2:-50196788	MS.gene98613:CDS
TCAATTCCTGATACTTACCA+AGG	0.670024	4.2:-50196957	MS.gene98613:CDS
GATGTTGAAAGTGTAAATGG+TGG	0.676353	4.2:+50197139	None:intergenic
TCTTATAAGAAGCATAGACA+TGG	0.699623	4.2:+50197003	None:intergenic
CACCACGACGACGAAGACCG+TGG	0.706643	4.2:-50197278	MS.gene98613:CDS
GCATCTTGGATCATGAAACG+TGG	0.709166	4.2:+50197161	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATATTAAGGTTAATGGAA+GGG	-	chr4.2:50197141-50197160	MS.gene98613:CDS	20.0%
!!	TTAATATTAAGGTTAATGGA+AGG	-	chr4.2:50197140-50197159	MS.gene98613:CDS	20.0%
!!	TTGGTTAATATTAAGGTTAA+TGG	-	chr4.2:50197136-50197155	MS.gene98613:CDS	20.0%
!!!	AATGGTTTTGGTTAATATTA+AGG	-	chr4.2:50197129-50197148	MS.gene98613:CDS	20.0%
!!	GTCATAAAGATTTTACCATT+TGG	-	chr4.2:50197029-50197048	MS.gene98613:CDS	25.0%
	TAAGTATCAGGAATTGAAGT+TGG	+	chr4.2:50197004-50197023	None:intergenic	30.0%
	TGGTAAAATCTTTATGACCT+TGG	+	chr4.2:50197027-50197046	None:intergenic	30.0%
!	AGAGATGTTGAAAGTGTAAA+TGG	+	chr4.2:50196831-50196850	None:intergenic	30.0%
!	TCTTATAAGAAGCATAGACA+TGG	+	chr4.2:50196964-50196983	None:intergenic	30.0%
!!	TCAGAATAATGGAATGGTTT+TGG	-	chr4.2:50197117-50197136	MS.gene98613:CDS	30.0%
!!!	AGATGCCTATTTTGTTGTTA+GGG	+	chr4.2:50196928-50196947	None:intergenic	30.0%
!!!	TAGATGCCTATTTTGTTGTT+AGG	+	chr4.2:50196929-50196948	None:intergenic	30.0%
	ATTTGGTCGCCGTTTATTTA+CGG	-	chr4.2:50197046-50197065	MS.gene98613:CDS	35.0%
	CACAACCCTAACAACAAAAT+AGG	-	chr4.2:50196920-50196939	MS.gene98613:CDS	35.0%
	GATGATCCATATTAGGAAGA+TGG	+	chr4.2:50196768-50196787	None:intergenic	35.0%
	GTCTAAGGATGATCCATATT+AGG	+	chr4.2:50196775-50196794	None:intergenic	35.0%
	TCAATTCCTGATACTTACCA+AGG	-	chr4.2:50197007-50197026	MS.gene98613:CDS	35.0%
	TCCATATTAGGAAGATGGTT+AGG	+	chr4.2:50196763-50196782	None:intergenic	35.0%
	TCCTAACCATCTTCCTAATA+TGG	-	chr4.2:50196759-50196778	MS.gene98613:CDS	35.0%
	TGAAGATTGCTTAGCGTAAA+AGG	+	chr4.2:50197091-50197110	None:intergenic	35.0%
	TTATGACCTTGGTAAGTATC+AGG	+	chr4.2:50197016-50197035	None:intergenic	35.0%
!	ATTGTTAGGGTTAGTGTGTT+GGG	+	chr4.2:50196881-50196900	None:intergenic	35.0%
!	GATGTTGAAAGTGTAAATGG+TGG	+	chr4.2:50196828-50196847	None:intergenic	35.0%
!!	TAGGAGTATTAGGAGAATGA+AGG	+	chr4.2:50196744-50196763	None:intergenic	35.0%
!!!	ATCATGAAACGTGGTTTTGT+GGG	+	chr4.2:50196797-50196816	None:intergenic	35.0%
	AAAAGCTGAAACTTAACCGC+CGG	+	chr4.2:50197277-50197296	None:intergenic	40.0%
	AAGTGTAAATGGTGGCATCT+TGG	+	chr4.2:50196820-50196839	None:intergenic	40.0%
	ACGCCAACACCGTAAATAAA+CGG	+	chr4.2:50197058-50197077	None:intergenic	40.0%
	AGGTTAATGGAAGGGTTAAG+TGG	-	chr4.2:50197149-50197168	MS.gene98613:CDS	40.0%
	CTTCAGCAGGATCAGAATAA+TGG	-	chr4.2:50197106-50197125	MS.gene98613:CDS	40.0%
	GTAAATAAACGGCGACCAAA+TGG	+	chr4.2:50197047-50197066	None:intergenic	40.0%
	TAATGGAAGGGTTAAGTGGA+GGG	-	chr4.2:50197153-50197172	MS.gene98613:CDS	40.0%
	TGAACTGTCCTGCTTATGTT+AGG	-	chr4.2:50197212-50197231	MS.gene98613:CDS	40.0%
	TTAATGGAAGGGTTAAGTGG+AGG	-	chr4.2:50197152-50197171	MS.gene98613:CDS	40.0%
!	CATTGTTAGGGTTAGTGTGT+TGG	+	chr4.2:50196882-50196901	None:intergenic	40.0%
!	GAGTGTGACTTGCATTGTTA+GGG	+	chr4.2:50196894-50196913	None:intergenic	40.0%
!	GCAGGATCAGAATAATGGAA+TGG	-	chr4.2:50197111-50197130	MS.gene98613:CDS	40.0%
!	TGAGTGTGACTTGCATTGTT+AGG	+	chr4.2:50196895-50196914	None:intergenic	40.0%
!!	AAGTTGGTAGTGAGATCTGT+TGG	+	chr4.2:50196988-50197007	None:intergenic	40.0%
!!	GATCATGAAACGTGGTTTTG+TGG	+	chr4.2:50196798-50196817	None:intergenic	40.0%
!!	GGAAGATGGTTAGGAGTATT+AGG	+	chr4.2:50196754-50196773	None:intergenic	40.0%
	CCTGCTTATGTTAGGTTCTC+CGG	-	chr4.2:50197220-50197239	MS.gene98613:CDS	45.0%
	CTTAGCGTAAAAGGCGAAAC+CGG	+	chr4.2:50197082-50197101	None:intergenic	45.0%
	GCATCTTGGATCATGAAACG+TGG	+	chr4.2:50196806-50196825	None:intergenic	45.0%
	TACGCTAAGCAATCTTCAGC+AGG	-	chr4.2:50197093-50197112	MS.gene98613:CDS	45.0%
	TAGGAGAATGAAGGCTCCTA+CGG	+	chr4.2:50196735-50196754	None:intergenic	45.0%
	TCGCCGTTTATTTACGGTGT+TGG	-	chr4.2:50197052-50197071	MS.gene98613:CDS	45.0%
	TTAAGTGGAGGGTTGGAAGT+TGG	-	chr4.2:50197164-50197183	MS.gene98613:CDS	45.0%
	TTGGAAGTTGGATCTCTGGA+AGG	-	chr4.2:50197176-50197195	MS.gene98613:CDS	45.0%
!!!	AACGTGGTTTTGTGGGTCTA+AGG	+	chr4.2:50196790-50196809	None:intergenic	45.0%
	AGGGTTGGAAGTTGGATCTC+TGG	-	chr4.2:50197172-50197191	MS.gene98613:CDS	50.0%
	ATGTTAGGTTCTCCGGTGAC+CGG	-	chr4.2:50197227-50197246	MS.gene98613:CDS	50.0%
	CCGGAGAACCTAACATAAGC+AGG	+	chr4.2:50197223-50197242	None:intergenic	50.0%
	CTCCTACGGCTGCAATTATG+CGG	+	chr4.2:50196721-50196740	None:intergenic	50.0%
	GTGGTGGCCACATTCTTTGA+TGG	+	chr4.2:50196672-50196691	None:intergenic	50.0%
	TTCTCCGGTGACCGGAATAA+TGG	-	chr4.2:50197235-50197254	MS.gene98613:CDS	50.0%
!	AGGGTTAGTGTGTTGGGTGT+GGG	+	chr4.2:50196875-50196894	None:intergenic	50.0%
!	TAGGGTTAGTGTGTTGGGTG+TGG	+	chr4.2:50196876-50196895	None:intergenic	50.0%
!!	TATTTACGGTGTTGGCGTGC+CGG	-	chr4.2:50197060-50197079	MS.gene98613:CDS	50.0%
	AGTGTGTTGGGTGTGGGGAA+GGG	+	chr4.2:50196869-50196888	None:intergenic	55.0%
	CAACTCCGGCGCCATTATTC+CGG	+	chr4.2:50197249-50197268	None:intergenic	55.0%
	CTACGGCTGCAATTATGCGG+CGG	+	chr4.2:50196718-50196737	None:intergenic	55.0%
	GGAAGGGTTAAGTGGAGGGT+TGG	-	chr4.2:50197157-50197176	MS.gene98613:CDS	55.0%
	GTGGGGAAGGGAGAGGAATT+TGG	+	chr4.2:50196857-50196876	None:intergenic	55.0%
	TAGTGTGTTGGGTGTGGGGA+AGG	+	chr4.2:50196870-50196889	None:intergenic	55.0%
!	GGGTTAGTGTGTTGGGTGTG+GGG	+	chr4.2:50196874-50196893	None:intergenic	55.0%
	AACCGCCGGAGCAACAACTC+CGG	+	chr4.2:50197263-50197282	None:intergenic	60.0%
	CGCCGCATAATTGCAGCCGT+AGG	-	chr4.2:50196716-50196735	MS.gene98613:CDS	60.0%
	GGCGCCATTATTCCGGTCAC+CGG	+	chr4.2:50197242-50197261	None:intergenic	60.0%
	GGTGACCGGAATAATGGCGC+CGG	-	chr4.2:50197241-50197260	MS.gene98613:CDS	60.0%
	TTATGCGGCGGAGGTTGCCA+CGG	+	chr4.2:50196706-50196725	None:intergenic	60.0%
	CACCACGACGACGAAGACCG+TGG	-	chr4.2:50196686-50196705	MS.gene98613:CDS	65.0%
	CACGGTCTTCGTCGTCGTGG+TGG	+	chr4.2:50196688-50196707	None:intergenic	65.0%
	CGGCTGCAATTATGCGGCGG+AGG	+	chr4.2:50196715-50196734	None:intergenic	65.0%
	GTTGGGTGTGGGGAAGGGAG+AGG	+	chr4.2:50196864-50196883	None:intergenic	65.0%
	TGCCACGGTCTTCGTCGTCG+TGG	+	chr4.2:50196691-50196710	None:intergenic	65.0%
!	TGGCGCCGGAGTTGTTGCTC+CGG	-	chr4.2:50197255-50197274	MS.gene98613:CDS	65.0%
	CGCCGGAGTTGTTGCTCCGG+CGG	-	chr4.2:50197258-50197277	MS.gene98613:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	50196665	50197321	50196665	ID=MS.gene98613
chr4.2	mRNA	50196665	50197321	50196665	ID=MS.gene98613.t1;Parent=MS.gene98613
chr4.2	exon	50196665	50197321	50196665	ID=MS.gene98613.t1.exon1;Parent=MS.gene98613.t1
chr4.2	CDS	50196665	50197321	50196665	ID=cds.MS.gene98613.t1;Parent=MS.gene98613.t1

Gene Sequence

>MS.gene98613

ATGTCCATCAAAGAATGTGGCCACCACGACGACGAAGACCGTGGCAACCTCCGCCGCATAATTGCAGCCGTAGGAGCCTTCATTCTCCTAATACTCCTAACCATCTTCCTAATATGGATCATCCTTAGACCCACAAAACCACGTTTCATGATCCAAGATGCCACCATTTACACTTTCAACATCTCTTCACCAAATTCCTCTCCCTTCCCCACACCCAACACACTAACCCTAACAATGCAAGTCACACTCACAACTCACAACCCTAACAACAAAATAGGCATCTACTATCAAAAACTCCATGTCTATGCTTCTTATAAGAGCCAACAGATCTCACTACCAACTTCAATTCCTGATACTTACCAAGGTCATAAAGATTTTACCATTTGGTCGCCGTTTATTTACGGTGTTGGCGTGCCGGTTTCGCCTTTTACGCTAAGCAATCTTCAGCAGGATCAGAATAATGGAATGGTTTTGGTTAATATTAAGGTTAATGGAAGGGTTAAGTGGAGGGTTGGAAGTTGGATCTCTGGAAGGTATCATATTTTTGTGAACTGTCCTGCTTATGTTAGGTTCTCCGGTGACCGGAATAATGGCGCCGGAGTTGTTGCTCCGGCGGTTAAGTTTCAGCTTTTGCAAAGTTGTCATGTTGATGTTTAG

Protein sequence

>MS.gene98613.t1

MSIKECGHHDDEDRGNLRRIIAAVGAFILLILLTIFLIWIILRPTKPRFMIQDATIYTFNISSPNSSPFPTPNTLTLTMQVTLTTHNPNNKIGIYYQKLHVYASYKSQQISLPTSIPDTYQGHKDFTIWSPFIYGVGVPVSPFTLSNLQQDQNNGMVLVNIKVNGRVKWRVGSWISGRYHIFVNCPAYVRFSGDRNNGAGVVAPAVKFQLLQSCHVDV