Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98698.t1 | XP_003623414.1 | 92 | 448 | 33 | 2 | 1 | 446 | 1 | 447 | 3.10E-223 | 784.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98698.t1 | Q6NKS1 | 51.2 | 367 | 153 | 4 | 1 | 367 | 1 | 341 | 5.1e-102 | 372.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98698.t1 | G7KU50 | 92.0 | 448 | 33 | 2 | 1 | 446 | 1 | 447 | 2.2e-223 | 784.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene98698 | MS.gene09251 | PPI |
MS.gene98698 | MS.gene004666 | PPI |
MS.gene98698 | MS.gene08994 | PPI |
MS.gene98698 | MS.gene39977 | PPI |
MS.gene036217 | MS.gene98698 | PPI |
MS.gene98698 | MS.gene32044 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98698.t1 | MTR_7g070510 | 94.196 | 448 | 23 | 2 | 1 | 446 | 1 | 447 | 0.0 | 844 |
MS.gene98698.t1 | MTR_4g013295 | 56.757 | 370 | 136 | 6 | 1 | 368 | 1 | 348 | 1.49e-146 | 422 |
MS.gene98698.t1 | MTR_7g021530 | 45.585 | 419 | 209 | 7 | 1 | 411 | 1 | 408 | 4.49e-119 | 354 |
MS.gene98698.t1 | MTR_7g080170 | 44.651 | 430 | 187 | 5 | 52 | 431 | 57 | 485 | 7.69e-119 | 356 |
MS.gene98698.t1 | MTR_7g021530 | 45.585 | 419 | 209 | 7 | 1 | 411 | 42 | 449 | 2.19e-118 | 353 |
MS.gene98698.t1 | MTR_4g037470 | 43.584 | 413 | 194 | 9 | 56 | 435 | 62 | 468 | 1.59e-114 | 344 |
MS.gene98698.t1 | MTR_4g037470 | 42.654 | 422 | 194 | 10 | 56 | 435 | 62 | 477 | 2.29e-111 | 337 |
MS.gene98698.t1 | MTR_2g090190 | 44.769 | 411 | 190 | 8 | 56 | 431 | 56 | 464 | 3.26e-109 | 331 |
MS.gene98698.t1 | MTR_7g021530 | 48.083 | 339 | 160 | 5 | 81 | 411 | 28 | 358 | 2.35e-103 | 312 |
MS.gene98698.t1 | MTR_7g112490 | 45.231 | 325 | 171 | 3 | 52 | 374 | 52 | 371 | 9.31e-99 | 301 |
MS.gene98698.t1 | MTR_7g112490 | 45.231 | 325 | 171 | 3 | 52 | 374 | 70 | 389 | 1.50e-98 | 301 |
MS.gene98698.t1 | MTR_8g017240 | 50.799 | 313 | 133 | 5 | 52 | 363 | 47 | 339 | 5.75e-98 | 298 |
MS.gene98698.t1 | MTR_4g120410 | 46.278 | 309 | 153 | 4 | 60 | 367 | 60 | 356 | 8.29e-98 | 298 |
MS.gene98698.t1 | MTR_1g083690 | 44.025 | 318 | 165 | 4 | 47 | 363 | 45 | 350 | 1.17e-97 | 297 |
MS.gene98698.t1 | MTR_2g435550 | 45.955 | 309 | 154 | 3 | 60 | 367 | 47 | 343 | 5.62e-95 | 290 |
MS.gene98698.t1 | MTR_2g435550 | 45.955 | 309 | 154 | 3 | 60 | 367 | 61 | 357 | 7.37e-95 | 290 |
MS.gene98698.t1 | MTR_7g080170 | 49.175 | 303 | 118 | 3 | 164 | 431 | 76 | 377 | 7.67e-92 | 283 |
MS.gene98698.t1 | MTR_1g016620 | 45.631 | 309 | 155 | 3 | 59 | 367 | 37 | 332 | 3.81e-91 | 280 |
MS.gene98698.t1 | MTR_7g021530 | 45.820 | 323 | 164 | 4 | 1 | 315 | 1 | 320 | 1.43e-90 | 278 |
MS.gene98698.t1 | MTR_7g021530 | 45.820 | 323 | 164 | 4 | 1 | 315 | 42 | 361 | 6.04e-90 | 278 |
MS.gene98698.t1 | MTR_2g435550 | 46.528 | 288 | 139 | 5 | 60 | 345 | 61 | 335 | 3.21e-87 | 271 |
MS.gene98698.t1 | MTR_7g021530 | 41.564 | 243 | 131 | 4 | 1 | 235 | 1 | 240 | 4.58e-51 | 174 |
MS.gene98698.t1 | MTR_7g021530 | 41.564 | 243 | 131 | 4 | 1 | 235 | 42 | 281 | 2.38e-50 | 173 |
MS.gene98698.t1 | MTR_4g118340 | 27.476 | 313 | 163 | 6 | 60 | 344 | 47 | 323 | 1.95e-31 | 124 |
MS.gene98698.t1 | MTR_2g020970 | 26.282 | 312 | 173 | 5 | 57 | 345 | 48 | 325 | 6.20e-27 | 111 |
MS.gene98698.t1 | MTR_6g087000 | 27.893 | 337 | 178 | 13 | 64 | 374 | 97 | 394 | 8.74e-27 | 114 |
MS.gene98698.t1 | MTR_6g087000 | 27.893 | 337 | 178 | 13 | 64 | 374 | 97 | 394 | 1.34e-26 | 113 |
MS.gene98698.t1 | MTR_2g020970 | 26.282 | 312 | 173 | 5 | 57 | 345 | 48 | 325 | 1.44e-26 | 111 |
MS.gene98698.t1 | MTR_3g105730 | 30.742 | 283 | 138 | 10 | 93 | 374 | 45 | 270 | 5.92e-25 | 103 |
MS.gene98698.t1 | MTR_3g105730 | 30.526 | 285 | 140 | 10 | 91 | 374 | 65 | 292 | 6.34e-25 | 104 |
MS.gene98698.t1 | MTR_3g104710 | 31.469 | 286 | 139 | 13 | 71 | 353 | 269 | 500 | 5.15e-24 | 105 |
MS.gene98698.t1 | MTR_5g009370 | 31.111 | 270 | 138 | 9 | 60 | 325 | 55 | 280 | 1.11e-23 | 101 |
MS.gene98698.t1 | MTR_3g068200 | 31.746 | 252 | 134 | 9 | 74 | 323 | 106 | 321 | 2.09e-23 | 101 |
MS.gene98698.t1 | MTR_1g014640 | 28.364 | 275 | 140 | 8 | 93 | 366 | 110 | 328 | 5.56e-23 | 99.8 |
MS.gene98698.t1 | MTR_1g013400 | 28.364 | 275 | 140 | 8 | 93 | 366 | 110 | 328 | 5.56e-23 | 99.8 |
MS.gene98698.t1 | MTR_1g015110 | 31.502 | 273 | 133 | 10 | 91 | 342 | 290 | 529 | 1.43e-22 | 100 |
MS.gene98698.t1 | MTR_4g123080 | 30.068 | 296 | 147 | 10 | 64 | 342 | 60 | 312 | 4.72e-22 | 97.4 |
MS.gene98698.t1 | MTR_4g123080 | 30.068 | 296 | 147 | 10 | 64 | 342 | 78 | 330 | 6.61e-22 | 97.4 |
MS.gene98698.t1 | MTR_4g125810 | 32.759 | 232 | 117 | 8 | 91 | 322 | 253 | 445 | 2.89e-21 | 96.7 |
MS.gene98698.t1 | MTR_8g102550 | 31.897 | 232 | 109 | 8 | 91 | 319 | 152 | 337 | 1.27e-20 | 94.0 |
MS.gene98698.t1 | MTR_1g115570 | 27.500 | 280 | 138 | 11 | 91 | 368 | 126 | 342 | 5.52e-20 | 91.3 |
MS.gene98698.t1 | MTR_2g040500 | 30.894 | 246 | 116 | 10 | 91 | 318 | 267 | 476 | 5.64e-20 | 92.8 |
MS.gene98698.t1 | MTR_2g033000 | 28.155 | 309 | 151 | 11 | 61 | 342 | 53 | 317 | 1.38e-19 | 90.5 |
MS.gene98698.t1 | MTR_5g080680 | 28.625 | 269 | 130 | 7 | 68 | 323 | 109 | 328 | 3.10e-19 | 89.7 |
MS.gene98698.t1 | MTR_4g094542 | 38.272 | 162 | 84 | 6 | 180 | 340 | 202 | 348 | 3.13e-18 | 86.3 |
MS.gene98698.t1 | MTR_1g086350 | 28.352 | 261 | 135 | 8 | 91 | 342 | 102 | 319 | 6.51e-17 | 82.4 |
MS.gene98698.t1 | MTR_1g086350 | 27.863 | 262 | 135 | 8 | 91 | 342 | 118 | 335 | 7.67e-17 | 82.4 |
MS.gene98698.t1 | MTR_2g078760 | 37.821 | 156 | 81 | 6 | 187 | 341 | 98 | 238 | 8.42e-17 | 80.5 |
MS.gene98698.t1 | MTR_6g081850 | 28.241 | 216 | 120 | 6 | 164 | 363 | 122 | 318 | 1.14e-16 | 81.3 |
MS.gene98698.t1 | MTR_2g078760 | 37.821 | 156 | 81 | 6 | 187 | 341 | 177 | 317 | 2.16e-16 | 80.5 |
MS.gene98698.t1 | MTR_5g071550 | 27.586 | 261 | 138 | 9 | 62 | 322 | 125 | 334 | 2.77e-16 | 80.5 |
MS.gene98698.t1 | MTR_3g464650 | 26.398 | 322 | 175 | 12 | 1 | 322 | 15 | 274 | 3.00e-16 | 79.7 |
MS.gene98698.t1 | MTR_8g463130 | 28.475 | 295 | 151 | 12 | 55 | 341 | 24 | 266 | 3.23e-16 | 79.0 |
MS.gene98698.t1 | MTR_1g050520 | 26.645 | 304 | 169 | 13 | 64 | 363 | 391 | 644 | 4.95e-16 | 80.9 |
MS.gene98698.t1 | MTR_8g463130 | 28.028 | 289 | 149 | 12 | 61 | 341 | 1 | 238 | 5.70e-16 | 77.8 |
MS.gene98698.t1 | MTR_3g464700 | 28.352 | 261 | 136 | 10 | 62 | 322 | 89 | 298 | 7.71e-16 | 79.0 |
MS.gene98698.t1 | MTR_3g074610 | 37.580 | 157 | 82 | 6 | 187 | 342 | 126 | 267 | 8.86e-16 | 77.8 |
MS.gene98698.t1 | MTR_4g094208 | 35.897 | 156 | 84 | 6 | 187 | 341 | 121 | 261 | 1.19e-15 | 77.4 |
MS.gene98698.t1 | MTR_3g105880 | 24.868 | 378 | 228 | 12 | 45 | 395 | 13 | 361 | 1.23e-15 | 78.6 |
MS.gene98698.t1 | MTR_1g086350 | 27.799 | 259 | 133 | 9 | 94 | 342 | 19 | 233 | 1.76e-15 | 77.0 |
MS.gene98698.t1 | MTR_2g008850 | 34.395 | 157 | 87 | 6 | 187 | 342 | 79 | 220 | 3.34e-15 | 75.1 |
MS.gene98698.t1 | MTR_7g090530 | 25.199 | 377 | 201 | 15 | 57 | 391 | 40 | 377 | 3.84e-15 | 77.4 |
MS.gene98698.t1 | MTR_3g105880 | 25.581 | 301 | 176 | 9 | 45 | 323 | 13 | 287 | 4.41e-15 | 76.3 |
MS.gene98698.t1 | MTR_1g028300 | 30.901 | 233 | 114 | 9 | 91 | 323 | 145 | 330 | 4.54e-15 | 77.0 |
MS.gene98698.t1 | MTR_2g008850 | 34.395 | 157 | 87 | 6 | 187 | 342 | 125 | 266 | 1.16e-14 | 74.7 |
MS.gene98698.t1 | MTR_5g063940 | 36.306 | 157 | 84 | 6 | 187 | 342 | 79 | 220 | 1.71e-14 | 73.2 |
MS.gene98698.t1 | MTR_5g063940 | 36.306 | 157 | 84 | 6 | 187 | 342 | 126 | 267 | 3.37e-14 | 73.2 |
MS.gene98698.t1 | MTR_5g024340 | 26.937 | 271 | 116 | 8 | 91 | 342 | 124 | 331 | 5.91e-14 | 73.6 |
MS.gene98698.t1 | MTR_3g091060 | 25.541 | 231 | 120 | 7 | 93 | 322 | 127 | 306 | 1.11e-13 | 72.4 |
MS.gene98698.t1 | MTR_3g107880 | 29.289 | 239 | 110 | 9 | 91 | 322 | 63 | 249 | 1.45e-13 | 71.6 |
MS.gene98698.t1 | MTR_3g107880 | 29.289 | 239 | 110 | 9 | 91 | 322 | 121 | 307 | 2.31e-13 | 71.6 |
MS.gene98698.t1 | MTR_3g107880 | 29.289 | 239 | 110 | 9 | 91 | 322 | 120 | 306 | 2.33e-13 | 71.6 |
MS.gene98698.t1 | MTR_7g060770 | 24.026 | 308 | 169 | 11 | 63 | 341 | 239 | 510 | 6.62e-13 | 70.9 |
MS.gene98698.t1 | MTR_7g100240 | 26.690 | 281 | 142 | 11 | 82 | 336 | 63 | 305 | 1.80e-12 | 68.9 |
MS.gene98698.t1 | MTR_2g078760 | 40.625 | 128 | 60 | 6 | 187 | 313 | 177 | 289 | 1.89e-12 | 68.2 |
MS.gene98698.t1 | MTR_4g007440 | 27.863 | 262 | 144 | 10 | 86 | 323 | 47 | 287 | 2.09e-12 | 68.6 |
MS.gene98698.t1 | MTR_7g090550 | 25.641 | 351 | 173 | 14 | 90 | 391 | 69 | 380 | 2.51e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98698.t1 | AT5G01700 | 50.670 | 373 | 146 | 5 | 1 | 367 | 1 | 341 | 7.33e-130 | 380 |
MS.gene98698.t1 | AT5G01700 | 53.115 | 305 | 130 | 2 | 63 | 367 | 1 | 292 | 5.42e-120 | 353 |
MS.gene98698.t1 | AT1G79630 | 43.925 | 428 | 187 | 7 | 56 | 430 | 63 | 490 | 7.26e-120 | 359 |
MS.gene98698.t1 | AT1G79630 | 43.925 | 428 | 187 | 7 | 56 | 430 | 59 | 486 | 7.64e-120 | 359 |
MS.gene98698.t1 | AT1G16220 | 44.019 | 418 | 191 | 6 | 56 | 430 | 60 | 477 | 5.27e-119 | 357 |
MS.gene98698.t1 | AT5G36250 | 48.611 | 360 | 167 | 7 | 38 | 383 | 46 | 401 | 2.89e-116 | 348 |
MS.gene98698.t1 | AT1G03590 | 44.527 | 402 | 194 | 6 | 56 | 430 | 56 | 455 | 3.15e-114 | 343 |
MS.gene98698.t1 | AT3G02750 | 44.676 | 432 | 183 | 6 | 54 | 430 | 58 | 488 | 3.92e-113 | 342 |
MS.gene98698.t1 | AT3G02750 | 44.676 | 432 | 183 | 6 | 54 | 430 | 58 | 488 | 3.92e-113 | 342 |
MS.gene98698.t1 | AT5G36250 | 46.791 | 374 | 167 | 8 | 38 | 383 | 46 | 415 | 3.31e-112 | 338 |
MS.gene98698.t1 | AT4G03415 | 45.274 | 402 | 188 | 8 | 63 | 436 | 70 | 467 | 8.96e-112 | 337 |
MS.gene98698.t1 | AT4G03415 | 45.274 | 402 | 188 | 8 | 63 | 436 | 70 | 467 | 8.96e-112 | 337 |
MS.gene98698.t1 | AT4G03415 | 45.274 | 402 | 188 | 8 | 63 | 436 | 70 | 467 | 8.96e-112 | 337 |
MS.gene98698.t1 | AT1G79630 | 42.928 | 403 | 177 | 7 | 81 | 430 | 18 | 420 | 1.10e-108 | 328 |
MS.gene98698.t1 | AT1G79630 | 42.928 | 403 | 177 | 7 | 81 | 430 | 18 | 420 | 1.10e-108 | 328 |
MS.gene98698.t1 | AT3G02750 | 41.176 | 476 | 188 | 8 | 46 | 431 | 51 | 524 | 3.32e-105 | 322 |
MS.gene98698.t1 | AT1G79630 | 47.727 | 308 | 135 | 5 | 148 | 430 | 74 | 380 | 1.58e-96 | 295 |
MS.gene98698.t1 | AT1G79630 | 47.727 | 308 | 135 | 5 | 148 | 430 | 74 | 380 | 1.58e-96 | 295 |
MS.gene98698.t1 | AT1G79630 | 47.727 | 308 | 135 | 5 | 148 | 430 | 74 | 380 | 1.58e-96 | 295 |
MS.gene98698.t1 | AT1G79630 | 47.727 | 308 | 135 | 5 | 148 | 430 | 74 | 380 | 1.58e-96 | 295 |
MS.gene98698.t1 | AT3G05640 | 44.660 | 309 | 153 | 3 | 56 | 363 | 58 | 349 | 4.09e-94 | 288 |
MS.gene98698.t1 | AT3G05640 | 44.660 | 309 | 153 | 3 | 56 | 363 | 58 | 349 | 4.09e-94 | 288 |
MS.gene98698.t1 | AT3G05640 | 44.660 | 309 | 153 | 3 | 56 | 363 | 58 | 349 | 4.09e-94 | 288 |
MS.gene98698.t1 | AT5G27930 | 43.770 | 313 | 162 | 4 | 52 | 362 | 53 | 353 | 2.44e-93 | 286 |
MS.gene98698.t1 | AT5G27930 | 43.770 | 313 | 162 | 4 | 52 | 362 | 53 | 353 | 2.44e-93 | 286 |
MS.gene98698.t1 | AT3G16800 | 41.026 | 351 | 182 | 5 | 16 | 363 | 20 | 348 | 6.17e-88 | 272 |
MS.gene98698.t1 | AT3G16800 | 41.026 | 351 | 182 | 5 | 16 | 363 | 20 | 348 | 6.17e-88 | 272 |
MS.gene98698.t1 | AT3G16800 | 41.026 | 351 | 182 | 5 | 16 | 363 | 20 | 348 | 6.17e-88 | 272 |
MS.gene98698.t1 | AT5G36250 | 47.241 | 290 | 138 | 6 | 38 | 313 | 46 | 334 | 1.83e-86 | 268 |
MS.gene98698.t1 | AT3G16800 | 43.956 | 273 | 130 | 4 | 94 | 363 | 1 | 253 | 1.09e-73 | 232 |
MS.gene98698.t1 | AT3G16800 | 43.956 | 273 | 130 | 4 | 94 | 363 | 1 | 253 | 1.09e-73 | 232 |
MS.gene98698.t1 | AT5G27930 | 42.529 | 261 | 136 | 4 | 52 | 310 | 53 | 301 | 1.52e-73 | 234 |
MS.gene98698.t1 | AT4G32950 | 42.020 | 307 | 145 | 5 | 62 | 366 | 44 | 319 | 5.28e-73 | 233 |
MS.gene98698.t1 | AT5G26010 | 40.774 | 336 | 173 | 5 | 33 | 366 | 16 | 327 | 9.73e-73 | 232 |
MS.gene98698.t1 | AT4G32950 | 42.231 | 251 | 112 | 5 | 62 | 310 | 44 | 263 | 3.58e-54 | 182 |
MS.gene98698.t1 | AT3G16800 | 34.498 | 229 | 125 | 5 | 16 | 241 | 20 | 226 | 1.75e-35 | 131 |
MS.gene98698.t1 | AT3G06270 | 27.645 | 293 | 156 | 6 | 73 | 345 | 70 | 326 | 3.00e-30 | 120 |
MS.gene98698.t1 | AT2G20050 | 26.480 | 321 | 178 | 9 | 64 | 364 | 116 | 398 | 1.08e-27 | 117 |
MS.gene98698.t1 | AT2G20050 | 26.480 | 321 | 178 | 9 | 64 | 364 | 116 | 398 | 1.22e-27 | 117 |
MS.gene98698.t1 | AT4G31750 | 27.562 | 283 | 146 | 9 | 85 | 364 | 56 | 282 | 1.42e-23 | 100 |
MS.gene98698.t1 | AT4G31750 | 27.562 | 283 | 146 | 9 | 85 | 364 | 56 | 282 | 2.66e-23 | 100 |
MS.gene98698.t1 | AT4G31750 | 27.562 | 283 | 146 | 9 | 85 | 364 | 56 | 282 | 2.66e-23 | 100 |
MS.gene98698.t1 | AT5G24940 | 29.365 | 252 | 128 | 6 | 91 | 342 | 64 | 265 | 2.04e-22 | 99.8 |
MS.gene98698.t1 | AT1G72770 | 33.195 | 241 | 120 | 8 | 91 | 322 | 238 | 446 | 2.64e-22 | 99.8 |
MS.gene98698.t1 | AT1G72770 | 33.195 | 241 | 120 | 8 | 91 | 322 | 238 | 446 | 2.64e-22 | 99.8 |
MS.gene98698.t1 | AT1G72770 | 33.195 | 241 | 120 | 8 | 91 | 322 | 238 | 446 | 2.64e-22 | 99.8 |
MS.gene98698.t1 | AT5G10740 | 30.435 | 253 | 124 | 7 | 91 | 342 | 64 | 265 | 2.85e-22 | 98.2 |
MS.gene98698.t1 | AT5G10740 | 30.435 | 253 | 124 | 7 | 91 | 342 | 64 | 265 | 2.85e-22 | 98.2 |
MS.gene98698.t1 | AT1G07430 | 37.288 | 177 | 83 | 5 | 160 | 323 | 193 | 354 | 1.16e-20 | 94.4 |
MS.gene98698.t1 | AT5G57050 | 31.034 | 232 | 120 | 7 | 91 | 322 | 120 | 311 | 1.08e-19 | 90.9 |
MS.gene98698.t1 | AT1G17550 | 30.165 | 242 | 119 | 8 | 91 | 318 | 237 | 442 | 1.09e-19 | 92.0 |
MS.gene98698.t1 | AT1G17550 | 30.165 | 242 | 119 | 8 | 91 | 318 | 237 | 442 | 1.09e-19 | 92.0 |
MS.gene98698.t1 | AT5G57050 | 31.034 | 232 | 120 | 7 | 91 | 322 | 160 | 351 | 1.09e-19 | 91.3 |
MS.gene98698.t1 | AT5G59220 | 31.048 | 248 | 109 | 9 | 88 | 323 | 145 | 342 | 2.19e-19 | 90.1 |
MS.gene98698.t1 | AT4G26080 | 32.456 | 228 | 112 | 9 | 91 | 318 | 172 | 357 | 8.27e-19 | 88.6 |
MS.gene98698.t1 | AT2G34740 | 33.166 | 199 | 110 | 8 | 166 | 363 | 159 | 335 | 1.14e-18 | 87.4 |
MS.gene98698.t1 | AT4G28400 | 30.743 | 296 | 143 | 15 | 55 | 341 | 3 | 245 | 1.56e-18 | 85.5 |
MS.gene98698.t1 | AT4G28400 | 30.743 | 296 | 143 | 15 | 55 | 341 | 25 | 267 | 2.36e-18 | 85.5 |
MS.gene98698.t1 | AT1G67820 | 26.332 | 319 | 179 | 9 | 63 | 380 | 87 | 350 | 4.02e-18 | 86.7 |
MS.gene98698.t1 | AT1G43900 | 30.677 | 251 | 121 | 9 | 89 | 338 | 152 | 350 | 4.49e-18 | 85.9 |
MS.gene98698.t1 | AT1G67820 | 26.019 | 319 | 180 | 9 | 63 | 380 | 123 | 386 | 5.44e-18 | 86.3 |
MS.gene98698.t1 | AT5G02760 | 26.380 | 326 | 158 | 12 | 91 | 375 | 72 | 356 | 5.62e-18 | 85.5 |
MS.gene98698.t1 | AT3G11410 | 35.326 | 184 | 83 | 6 | 160 | 322 | 173 | 341 | 6.88e-18 | 85.5 |
MS.gene98698.t1 | AT5G51760 | 33.168 | 202 | 108 | 6 | 153 | 342 | 155 | 341 | 1.77e-17 | 84.3 |
MS.gene98698.t1 | AT5G51760 | 33.168 | 202 | 108 | 6 | 153 | 342 | 185 | 371 | 2.83e-17 | 84.0 |
MS.gene98698.t1 | AT2G29380 | 31.933 | 238 | 116 | 13 | 91 | 322 | 112 | 309 | 4.68e-17 | 82.8 |
MS.gene98698.t1 | AT2G20630 | 28.968 | 252 | 127 | 10 | 91 | 341 | 63 | 263 | 6.20e-17 | 81.3 |
MS.gene98698.t1 | AT3G17250 | 27.668 | 253 | 125 | 9 | 89 | 329 | 156 | 362 | 6.43e-17 | 82.8 |
MS.gene98698.t1 | AT1G07160 | 28.736 | 261 | 137 | 9 | 62 | 322 | 124 | 335 | 8.04e-17 | 82.4 |
MS.gene98698.t1 | AT2G40180 | 28.179 | 291 | 154 | 10 | 60 | 342 | 128 | 371 | 8.65e-17 | 82.4 |
MS.gene98698.t1 | AT1G78200 | 33.146 | 178 | 105 | 5 | 166 | 342 | 104 | 268 | 8.89e-17 | 80.9 |
MS.gene98698.t1 | AT1G78200 | 33.146 | 178 | 105 | 5 | 166 | 342 | 104 | 268 | 8.89e-17 | 80.9 |
MS.gene98698.t1 | AT1G78200 | 33.146 | 178 | 105 | 5 | 166 | 342 | 104 | 268 | 8.89e-17 | 80.9 |
MS.gene98698.t1 | AT1G78200 | 32.597 | 181 | 108 | 5 | 163 | 342 | 56 | 223 | 8.89e-17 | 80.1 |
MS.gene98698.t1 | AT1G78200 | 32.597 | 181 | 108 | 5 | 163 | 342 | 56 | 223 | 8.89e-17 | 80.1 |
MS.gene98698.t1 | AT2G20630 | 29.317 | 249 | 124 | 10 | 94 | 341 | 66 | 263 | 1.04e-16 | 80.9 |
MS.gene98698.t1 | AT5G53140 | 27.237 | 257 | 133 | 9 | 87 | 340 | 126 | 331 | 1.78e-16 | 81.6 |
MS.gene98698.t1 | AT5G53140 | 27.237 | 257 | 133 | 9 | 87 | 340 | 126 | 331 | 1.78e-16 | 81.6 |
MS.gene98698.t1 | AT3G62260 | 28.571 | 238 | 123 | 8 | 91 | 323 | 27 | 222 | 6.33e-16 | 78.6 |
MS.gene98698.t1 | AT2G25620 | 26.733 | 303 | 156 | 11 | 75 | 367 | 114 | 360 | 7.53e-16 | 79.3 |
MS.gene98698.t1 | AT2G25620 | 26.733 | 303 | 156 | 11 | 75 | 367 | 114 | 360 | 7.53e-16 | 79.3 |
MS.gene98698.t1 | AT3G62260 | 28.571 | 238 | 123 | 8 | 91 | 323 | 117 | 312 | 1.20e-15 | 79.0 |
MS.gene98698.t1 | AT3G62260 | 28.571 | 238 | 123 | 8 | 91 | 323 | 116 | 311 | 1.26e-15 | 78.6 |
MS.gene98698.t1 | AT1G18030 | 27.650 | 217 | 122 | 5 | 163 | 363 | 151 | 348 | 4.18e-15 | 76.6 |
MS.gene98698.t1 | AT1G48040 | 29.675 | 246 | 123 | 9 | 91 | 329 | 116 | 318 | 1.34e-14 | 75.5 |
MS.gene98698.t1 | AT2G40860 | 29.500 | 200 | 119 | 8 | 170 | 368 | 375 | 553 | 1.91e-14 | 75.9 |
MS.gene98698.t1 | AT1G34750 | 36.709 | 158 | 82 | 6 | 187 | 342 | 126 | 267 | 2.40e-14 | 73.6 |
MS.gene98698.t1 | AT1G34750 | 36.709 | 158 | 82 | 6 | 187 | 342 | 126 | 267 | 2.40e-14 | 73.6 |
MS.gene98698.t1 | AT1G34750 | 36.709 | 158 | 82 | 6 | 187 | 342 | 126 | 267 | 2.40e-14 | 73.6 |
MS.gene98698.t1 | AT2G30020 | 26.820 | 261 | 142 | 9 | 62 | 322 | 141 | 352 | 3.01e-14 | 74.7 |
MS.gene98698.t1 | AT2G40860 | 32.258 | 155 | 91 | 5 | 170 | 323 | 473 | 614 | 3.02e-14 | 75.5 |
MS.gene98698.t1 | AT2G40860 | 32.258 | 155 | 91 | 5 | 170 | 323 | 473 | 614 | 3.77e-14 | 75.1 |
MS.gene98698.t1 | AT4G31860 | 28.146 | 302 | 167 | 13 | 45 | 323 | 13 | 287 | 8.30e-14 | 72.4 |
MS.gene98698.t1 | AT4G31860 | 26.875 | 320 | 184 | 13 | 45 | 341 | 13 | 305 | 9.56e-14 | 72.8 |
MS.gene98698.t1 | AT2G34740 | 31.953 | 169 | 98 | 7 | 166 | 333 | 155 | 307 | 1.42e-13 | 71.6 |
MS.gene98698.t1 | AT2G34740 | 31.953 | 169 | 98 | 7 | 166 | 333 | 173 | 325 | 1.49e-13 | 72.0 |
MS.gene98698.t1 | AT3G15260 | 35.256 | 156 | 85 | 6 | 187 | 341 | 133 | 273 | 3.77e-13 | 70.1 |
MS.gene98698.t1 | AT3G15260 | 35.256 | 156 | 85 | 6 | 187 | 341 | 133 | 273 | 3.77e-13 | 70.1 |
MS.gene98698.t1 | AT1G22280 | 35.669 | 157 | 85 | 6 | 187 | 342 | 125 | 266 | 4.82e-13 | 69.7 |
MS.gene98698.t1 | AT1G22280 | 35.669 | 157 | 85 | 6 | 187 | 342 | 131 | 272 | 5.98e-13 | 69.7 |
MS.gene98698.t1 | AT3G51470 | 24.627 | 268 | 141 | 10 | 64 | 323 | 76 | 290 | 1.60e-12 | 68.9 |
MS.gene98698.t1 | AT3G51470 | 24.627 | 268 | 141 | 10 | 64 | 323 | 32 | 246 | 2.03e-12 | 68.2 |
MS.gene98698.t1 | AT1G18030 | 28.221 | 163 | 92 | 3 | 163 | 313 | 151 | 300 | 7.26e-12 | 66.6 |
MS.gene98698.t1 | AT2G25070 | 25.602 | 332 | 173 | 15 | 45 | 341 | 13 | 305 | 7.31e-12 | 67.0 |
MS.gene98698.t1 | AT2G25070 | 25.602 | 332 | 173 | 15 | 45 | 341 | 13 | 305 | 7.31e-12 | 67.0 |
Find 84 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGCTGCTGTTGACTTTCT+TGG | 0.181729 | 7.1:-31425546 | None:intergenic |
CCAGTTGATAGTTGGAAATT+TGG | 0.206532 | 7.1:+31424652 | MS.gene98698:CDS |
GCAAGATGAATTTGTTGTTT+TGG | 0.234194 | 7.1:+31425041 | MS.gene98698:CDS |
CAATCATCTAAGCACCTTAA+TGG | 0.234478 | 7.1:+31425879 | MS.gene98698:CDS |
AATGCCTTCAACTTCCATTA+AGG | 0.284999 | 7.1:-31425893 | None:intergenic |
GATTGAGAATGTGATAAAAT+AGG | 0.296927 | 7.1:-31425666 | None:intergenic |
GAATAAATTGCGAAACTTTG+TGG | 0.322331 | 7.1:-31424178 | None:intergenic |
CAGTTGATAGTTGGAAATTT+GGG | 0.326425 | 7.1:+31424653 | MS.gene98698:CDS |
ACCAAGATTCAATGACAGTT+TGG | 0.327013 | 7.1:+31423600 | MS.gene98698:CDS |
AACCGGATGTATACAGAATA+TGG | 0.329139 | 7.1:+31424905 | MS.gene98698:CDS |
TCTGAAATCGTTTGATGAAA+TGG | 0.343971 | 7.1:+31424364 | MS.gene98698:CDS |
CCCAAACTGTCATTGAATCT+TGG | 0.361120 | 7.1:-31423601 | None:intergenic |
ACTATCTGAAGCAATCAAAA+TGG | 0.363945 | 7.1:+31424220 | MS.gene98698:CDS |
CCAAGATTCAATGACAGTTT+GGG | 0.379856 | 7.1:+31423601 | MS.gene98698:CDS |
AGCTGTAGCTTTAATTAAAC+AGG | 0.381379 | 7.1:+31424439 | MS.gene98698:CDS |
ACAACATATCCCTTGCTTCA+TGG | 0.386921 | 7.1:+31424330 | MS.gene98698:CDS |
CAATACTTACTTGGAATATC+CGG | 0.392328 | 7.1:-31424749 | None:intergenic |
AGCCACGATGTTGCTCTTAG+AGG | 0.393147 | 7.1:+31423398 | MS.gene98698:CDS |
TTAGCTATGTCAAGAGCCTT+TGG | 0.396496 | 7.1:+31424952 | MS.gene98698:CDS |
GGAGCAATGGTTAGATTAAG+AGG | 0.403896 | 7.1:+31423527 | MS.gene98698:CDS |
AAATCAACAGTAAGTTGAAC+AGG | 0.410781 | 7.1:-31424722 | None:intergenic |
GTCTTCTGTGGCGTGTTTGA+CGG | 0.416167 | 7.1:+31424140 | MS.gene98698:CDS |
CTCATATTTCTAGCAAGCCT+TGG | 0.424591 | 7.1:-31425849 | None:intergenic |
ATTAGTATCATAGTATTTGT+TGG | 0.424604 | 7.1:-31424255 | None:intergenic |
ACTTACTGTTGATTTGAAAC+CGG | 0.431238 | 7.1:+31424730 | MS.gene98698:CDS |
AACAACAAATTCATCTTGCT+TGG | 0.431974 | 7.1:-31425037 | None:intergenic |
GAAGACAATGAAACTGTTGC+TGG | 0.432915 | 7.1:+31425750 | MS.gene98698:CDS |
CAACATATCCCTTGCTTCAT+GGG | 0.437188 | 7.1:+31424331 | MS.gene98698:CDS |
CAGGGTGACCAGTTGATAGT+TGG | 0.439596 | 7.1:+31424644 | MS.gene98698:intron |
CAGGACTATGCTGGAGAAGA+AGG | 0.456514 | 7.1:+31424113 | MS.gene98698:intron |
CCAAATTTCCAACTATCAAC+TGG | 0.463615 | 7.1:-31424652 | None:intergenic |
GAAGAATGGAAAGCTCTTGA+AGG | 0.466937 | 7.1:+31425795 | MS.gene98698:CDS |
ATGCCTGATGATGACTGTCC+TGG | 0.467938 | 7.1:+31424928 | MS.gene98698:CDS |
GAAACTGTTGCTGGAAAAGT+TGG | 0.469501 | 7.1:+31425759 | MS.gene98698:CDS |
TTTCGCTGCGGATGAAGAAC+CGG | 0.471448 | 7.1:+31424888 | MS.gene98698:CDS |
GCCTGGATGTATAAGTATCC+TGG | 0.473714 | 7.1:+31425594 | MS.gene98698:CDS |
ATCATCAAGAAACAAGCATA+TGG | 0.474043 | 7.1:-31425640 | None:intergenic |
GAATCTTTAGCTGTGAAGGA+AGG | 0.481881 | 7.1:+31424863 | MS.gene98698:CDS |
CTCGTGCAGTTCTTTGCACA+AGG | 0.487423 | 7.1:+31424681 | MS.gene98698:CDS |
ATCCATATTCTGTATACATC+CGG | 0.490554 | 7.1:-31424907 | None:intergenic |
ATTTATTATCAGGACTATGC+TGG | 0.496533 | 7.1:+31424104 | MS.gene98698:intron |
AATCCAGGACAGTCATCATC+AGG | 0.497520 | 7.1:-31424931 | None:intergenic |
TGGAAAAGTTGGAGTGGAAC+TGG | 0.501997 | 7.1:+31425770 | MS.gene98698:CDS |
TCAAGAATCTTTAGCTGTGA+AGG | 0.508129 | 7.1:+31424859 | MS.gene98698:CDS |
TGTGGCGTGTTTGACGGTCA+TGG | 0.512054 | 7.1:+31424146 | MS.gene98698:CDS |
TTTGACGGTCATGGTCCTCT+AGG | 0.518300 | 7.1:+31424155 | MS.gene98698:CDS |
GTTGAAACCGAGGTGAATGA+TGG | 0.518422 | 7.1:+31423434 | MS.gene98698:CDS |
GCTGTCACGTTTCAAAATGA+TGG | 0.521805 | 7.1:+31423506 | MS.gene98698:CDS |
AAATGGATGATCATCTTGCT+CGG | 0.523245 | 7.1:+31424381 | MS.gene98698:CDS |
GTGGACATCATCAAAATTGT+CGG | 0.525195 | 7.1:-31424288 | None:intergenic |
TAAAGCGCGCTGTTAAAGCC+TGG | 0.527207 | 7.1:+31425577 | MS.gene98698:CDS |
AGCACCTTAATGGAAGTTGA+AGG | 0.541332 | 7.1:+31425889 | MS.gene98698:CDS |
ATTCAATATCAAAACTTCCA+AGG | 0.542466 | 7.1:+31425832 | MS.gene98698:CDS |
AACATCCTTCCCATGAAGCA+AGG | 0.545861 | 7.1:-31424340 | None:intergenic |
AATCTTTAGCTGTGAAGGAA+GGG | 0.549092 | 7.1:+31424864 | MS.gene98698:CDS |
GATTGCTTCAGATAGTTTCG+AGG | 0.550025 | 7.1:-31424213 | None:intergenic |
ATATCCCTTGCTTCATGGGA+AGG | 0.553019 | 7.1:+31424335 | MS.gene98698:CDS |
GAGTGGAACTGGATGAAGAA+TGG | 0.555708 | 7.1:+31425781 | MS.gene98698:CDS |
GTTGCTCTTAGAGGAGGAGG+AGG | 0.558281 | 7.1:+31423407 | MS.gene98698:CDS |
TCCAGGATACTTATACATCC+AGG | 0.559238 | 7.1:-31425595 | None:intergenic |
GCTCTTGACATAGCTAATCC+AGG | 0.563331 | 7.1:-31424946 | None:intergenic |
AATGGATGATCATCTTGCTC+GGG | 0.566783 | 7.1:+31424382 | MS.gene98698:CDS |
TATACACAACAAGGTATGAA+AGG | 0.568417 | 7.1:+31423572 | MS.gene98698:CDS |
GTTTCAAAATGATGGAGCAA+TGG | 0.570647 | 7.1:+31423514 | MS.gene98698:CDS |
AATCAAAATGGCGCAACAGA+AGG | 0.578841 | 7.1:+31424232 | MS.gene98698:CDS |
AGGAGGCAGAGTTGAAACCG+AGG | 0.596046 | 7.1:+31423424 | MS.gene98698:CDS |
GATGTTGCTCTTAGAGGAGG+AGG | 0.599534 | 7.1:+31423404 | MS.gene98698:CDS |
CACGATGTTGCTCTTAGAGG+AGG | 0.613102 | 7.1:+31423401 | MS.gene98698:CDS |
ACATCCTTCCCATGAAGCAA+GGG | 0.615226 | 7.1:-31424339 | None:intergenic |
ATTGCTTCAGATAGTTTCGA+GGG | 0.615251 | 7.1:-31424212 | None:intergenic |
TGTTGATGCGGTTATTATTG+CGG | 0.616328 | 7.1:-31424310 | None:intergenic |
CAAGGGATATGTTGTTGATG+CGG | 0.616397 | 7.1:-31424322 | None:intergenic |
CTATGCTGGAGAAGAAGGCA+TGG | 0.621989 | 7.1:+31424118 | MS.gene98698:CDS |
AACACTGATAGCTATTGCAG+TGG | 0.622757 | 7.1:+31424410 | MS.gene98698:CDS |
AGATTCAATGACAGTTTGGG+AGG | 0.625524 | 7.1:+31423604 | MS.gene98698:CDS |
TGCGAAACTTTGTGGCCTAG+AGG | 0.626825 | 7.1:-31424170 | None:intergenic |
TCGTGCAGTTCTTTGCACAA+GGG | 0.632091 | 7.1:+31424682 | MS.gene98698:CDS |
ATATTCTCCATCATTCACCT+CGG | 0.635736 | 7.1:-31423441 | None:intergenic |
ACACATCTGGTGATGCAATG+AGG | 0.636186 | 7.1:-31424999 | None:intergenic |
GAAGAAGGCATGGTCTTCTG+TGG | 0.636280 | 7.1:+31424128 | MS.gene98698:CDS |
GTTTCAATGTATACACAACA+AGG | 0.640908 | 7.1:+31423563 | MS.gene98698:CDS |
TGATGCGGTTATTATTGCGG+TGG | 0.655015 | 7.1:-31424307 | None:intergenic |
TGTTGCTGGAAAAGTTGGAG+TGG | 0.662878 | 7.1:+31425764 | MS.gene98698:CDS |
CTCCTCTAAGAGCAACATCG+TGG | 0.712569 | 7.1:-31423400 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAAAAAAAAAAAAAACAA+AGG | - | chr7.1:31425473-31425492 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTACAGATAT+GGG | + | chr7.1:31425479-31425498 | MS.gene98698:intron | 10.0% |
!!! | TTTTTTTTTTTTTACAGATA+TGG | + | chr7.1:31425478-31425497 | MS.gene98698:intron | 10.0% |
!! | AAATTACAATTAGATTTGAT+AGG | - | chr7.1:31424815-31424834 | None:intergenic | 15.0% |
!! | AATGATTAATCAAATTGAAA+TGG | - | chr7.1:31423774-31423793 | None:intergenic | 15.0% |
!! | AAAAAAAAAACAAAGGATAC+CGG | - | chr7.1:31425466-31425485 | None:intergenic | 20.0% |
!! | AACCTTAAAATTAAAGATCA+AGG | - | chr7.1:31425108-31425127 | None:intergenic | 20.0% |
!! | AATCTTGACAATTACATTAT+TGG | - | chr7.1:31423905-31423924 | None:intergenic | 20.0% |
!! | ACCTTAAAATTAAAGATCAA+GGG | - | chr7.1:31425107-31425126 | None:intergenic | 20.0% |
!! | ATAATATTCGCAATTACATA+AGG | + | chr7.1:31424481-31424500 | MS.gene98698:intron | 20.0% |
!! | ATTAGTATCATAGTATTTGT+TGG | - | chr7.1:31424258-31424277 | None:intergenic | 20.0% |
!! | CTAAAATTCTTCATTACATT+AGG | + | chr7.1:31423988-31424007 | MS.gene98698:intron | 20.0% |
!!! | TGAATATGCTATTTATTATC+AGG | + | chr7.1:31424094-31424113 | MS.gene98698:intron | 20.0% |
!!! | TTAACTTTTGATGAATTTCA+AGG | + | chr7.1:31423792-31423811 | MS.gene98698:intron | 20.0% |
! | AATTGATGAAATGTAACATG+TGG | + | chr7.1:31424058-31424077 | MS.gene98698:intron | 25.0% |
! | AGACAAATTTCTATCATGAA+TGG | - | chr7.1:31423948-31423967 | None:intergenic | 25.0% |
! | ATTCAATATCAAAACTTCCA+AGG | + | chr7.1:31425832-31425851 | MS.gene98698:CDS | 25.0% |
! | CATTAGGTGATTTAATCTTA+TGG | + | chr7.1:31424004-31424023 | MS.gene98698:intron | 25.0% |
! | GATTGAGAATGTGATAAAAT+AGG | - | chr7.1:31425669-31425688 | None:intergenic | 25.0% |
! | TAACATAACAATTGTGTATC+CGG | - | chr7.1:31425374-31425393 | None:intergenic | 25.0% |
! | TTAAGAAAGAAATCCATGTA+TGG | - | chr7.1:31425413-31425432 | None:intergenic | 25.0% |
! | TTACATAAGGTAAGAAATCA+TGG | + | chr7.1:31424494-31424513 | MS.gene98698:intron | 25.0% |
! | TTCAGTGTAATTATATGTGT+CGG | + | chr7.1:31425242-31425261 | MS.gene98698:intron | 25.0% |
! | TTGATATACCAATACTTACT+TGG | - | chr7.1:31424761-31424780 | None:intergenic | 25.0% |
! | TTTCTTTCTTAAAACACGTT+CGG | + | chr7.1:31425421-31425440 | MS.gene98698:intron | 25.0% |
! | TTTGTTCAATCAATTCTTGT+GGG | + | chr7.1:31423715-31423734 | MS.gene98698:intron | 25.0% |
!! | ATTTTTCTGTAAAACACATC+TGG | - | chr7.1:31425015-31425034 | None:intergenic | 25.0% |
!! | TAATTTTATCGACGTTTTTC+AGG | + | chr7.1:31424829-31424848 | MS.gene98698:intron | 25.0% |
!! | TTTTGTTCAATCAATTCTTG+TGG | + | chr7.1:31423714-31423733 | MS.gene98698:intron | 25.0% |
!!! | ACCCTTGATCTTTAATTTTA+AGG | + | chr7.1:31425103-31425122 | MS.gene98698:intron | 25.0% |
!!! | ATTTTAGCAGTAATTCCTAA+AGG | - | chr7.1:31423975-31423994 | None:intergenic | 25.0% |
AACAACAAATTCATCTTGCT+TGG | - | chr7.1:31425040-31425059 | None:intergenic | 30.0% | |
ATCATCAAGAAACAAGCATA+TGG | - | chr7.1:31425643-31425662 | None:intergenic | 30.0% | |
ATCCATATTCTGTATACATC+CGG | - | chr7.1:31424910-31424929 | None:intergenic | 30.0% | |
ATTTATTATCAGGACTATGC+TGG | + | chr7.1:31424104-31424123 | MS.gene98698:intron | 30.0% | |
CAATACTTACTTGGAATATC+CGG | - | chr7.1:31424752-31424771 | None:intergenic | 30.0% | |
GAAATTTGTCTCTTACCTTT+AGG | + | chr7.1:31423957-31423976 | MS.gene98698:intron | 30.0% | |
GAATAAATTGCGAAACTTTG+TGG | - | chr7.1:31424181-31424200 | None:intergenic | 30.0% | |
GCGAATATTATCTAGTTACA+CGG | - | chr7.1:31424472-31424491 | None:intergenic | 30.0% | |
GTTTCAATGTATACACAACA+AGG | + | chr7.1:31423563-31423582 | MS.gene98698:CDS | 30.0% | |
TATACACAACAAGGTATGAA+AGG | + | chr7.1:31423572-31423591 | MS.gene98698:CDS | 30.0% | |
TCTAAAAAAATTAGCCGTGT+CGG | - | chr7.1:31425211-31425230 | None:intergenic | 30.0% | |
TTCGATATTGCATAGAATCA+TGG | + | chr7.1:31424529-31424548 | MS.gene98698:intron | 30.0% | |
TTTCAATAAGCTATGAAGCA+CGG | - | chr7.1:31425320-31425339 | None:intergenic | 30.0% | |
! | AAATCAACAGTAAGTTGAAC+AGG | - | chr7.1:31424725-31424744 | None:intergenic | 30.0% |
! | ACTATCTGAAGCAATCAAAA+TGG | + | chr7.1:31424220-31424239 | MS.gene98698:CDS | 30.0% |
! | GACTTTTGCCTAAAAGATTA+TGG | + | chr7.1:31424976-31424995 | MS.gene98698:CDS | 30.0% |
! | TACTTATTGACTATGAAGCA+CGG | + | chr7.1:31425144-31425163 | MS.gene98698:intron | 30.0% |
! | TCTGAAATCGTTTGATGAAA+TGG | + | chr7.1:31424364-31424383 | MS.gene98698:CDS | 30.0% |
!! | ACTTACTGTTGATTTGAAAC+CGG | + | chr7.1:31424730-31424749 | MS.gene98698:CDS | 30.0% |
!! | AGCTGTAGCTTTAATTAAAC+AGG | + | chr7.1:31424439-31424458 | MS.gene98698:CDS | 30.0% |
!! | CAGTTGATAGTTGGAAATTT+GGG | + | chr7.1:31424653-31424672 | MS.gene98698:CDS | 30.0% |
!!! | GCAAGATGAATTTGTTGTTT+TGG | + | chr7.1:31425041-31425060 | MS.gene98698:CDS | 30.0% |
AAATGGATGATCATCTTGCT+CGG | + | chr7.1:31424381-31424400 | MS.gene98698:CDS | 35.0% | |
AACCGGATGTATACAGAATA+TGG | + | chr7.1:31424905-31424924 | MS.gene98698:CDS | 35.0% | |
AATCTTTAGCTGTGAAGGAA+GGG | + | chr7.1:31424864-31424883 | MS.gene98698:CDS | 35.0% | |
ACCAAGATTCAATGACAGTT+TGG | + | chr7.1:31423600-31423619 | MS.gene98698:CDS | 35.0% | |
ATATTCTCCATCATTCACCT+CGG | - | chr7.1:31423444-31423463 | None:intergenic | 35.0% | |
ATTGCTTCAGATAGTTTCGA+GGG | - | chr7.1:31424215-31424234 | None:intergenic | 35.0% | |
CAATCATCTAAGCACCTTAA+TGG | + | chr7.1:31425879-31425898 | MS.gene98698:CDS | 35.0% | |
CATTTACCCGATAAATTGCA+GGG | + | chr7.1:31424626-31424645 | MS.gene98698:intron | 35.0% | |
CCAAATTTCCAACTATCAAC+TGG | - | chr7.1:31424655-31424674 | None:intergenic | 35.0% | |
CCAAGATTCAATGACAGTTT+GGG | + | chr7.1:31423601-31423620 | MS.gene98698:CDS | 35.0% | |
CGGATATTCCAAGTAAGTAT+TGG | + | chr7.1:31424750-31424769 | MS.gene98698:intron | 35.0% | |
GTGGACATCATCAAAATTGT+CGG | - | chr7.1:31424291-31424310 | None:intergenic | 35.0% | |
TCAAGAATCTTTAGCTGTGA+AGG | + | chr7.1:31424859-31424878 | MS.gene98698:CDS | 35.0% | |
TGTTGATGCGGTTATTATTG+CGG | - | chr7.1:31424313-31424332 | None:intergenic | 35.0% | |
TTCAGAGTTTGAACCATACA+TGG | + | chr7.1:31425397-31425416 | MS.gene98698:intron | 35.0% | |
! | CAATGAGGCCATAATCTTTT+AGG | - | chr7.1:31424987-31425006 | None:intergenic | 35.0% |
! | GTTTCAAAATGATGGAGCAA+TGG | + | chr7.1:31423514-31423533 | MS.gene98698:CDS | 35.0% |
! | TTTTAGGCAAAAGTCTCCAA+AGG | - | chr7.1:31424971-31424990 | None:intergenic | 35.0% |
!! | CCAGTTGATAGTTGGAAATT+TGG | + | chr7.1:31424652-31424671 | MS.gene98698:CDS | 35.0% |
!!! | TTGTTGTTTTGGCAACTGAT+GGG | + | chr7.1:31425052-31425071 | MS.gene98698:CDS | 35.0% |
!!! | TTTGTTGTTTTGGCAACTGA+TGG | + | chr7.1:31425051-31425070 | MS.gene98698:CDS | 35.0% |
AACACTGATAGCTATTGCAG+TGG | + | chr7.1:31424410-31424429 | MS.gene98698:CDS | 40.0% | |
AATCAAAATGGCGCAACAGA+AGG | + | chr7.1:31424232-31424251 | MS.gene98698:CDS | 40.0% | |
AATGGATGATCATCTTGCTC+GGG | + | chr7.1:31424382-31424401 | MS.gene98698:CDS | 40.0% | |
ACAACATATCCCTTGCTTCA+TGG | + | chr7.1:31424330-31424349 | MS.gene98698:CDS | 40.0% | |
AGATTCAATGACAGTTTGGG+AGG | + | chr7.1:31423604-31423623 | MS.gene98698:CDS | 40.0% | |
CAACATATCCCTTGCTTCAT+GGG | + | chr7.1:31424331-31424350 | MS.gene98698:CDS | 40.0% | |
CAAGGGATATGTTGTTGATG+CGG | - | chr7.1:31424325-31424344 | None:intergenic | 40.0% | |
CCCAAACTGTCATTGAATCT+TGG | - | chr7.1:31423604-31423623 | None:intergenic | 40.0% | |
GAAACTGTTGCTGGAAAAGT+TGG | + | chr7.1:31425759-31425778 | MS.gene98698:CDS | 40.0% | |
GAAGAATGGAAAGCTCTTGA+AGG | + | chr7.1:31425795-31425814 | MS.gene98698:CDS | 40.0% | |
GAAGACAATGAAACTGTTGC+TGG | + | chr7.1:31425750-31425769 | MS.gene98698:CDS | 40.0% | |
GAATCTTTAGCTGTGAAGGA+AGG | + | chr7.1:31424863-31424882 | MS.gene98698:CDS | 40.0% | |
GATTGCTTCAGATAGTTTCG+AGG | - | chr7.1:31424216-31424235 | None:intergenic | 40.0% | |
GCATTTACCCGATAAATTGC+AGG | + | chr7.1:31424625-31424644 | MS.gene98698:intron | 40.0% | |
GCTGTCACGTTTCAAAATGA+TGG | + | chr7.1:31423506-31423525 | MS.gene98698:CDS | 40.0% | |
GGAGCAATGGTTAGATTAAG+AGG | + | chr7.1:31423527-31423546 | MS.gene98698:CDS | 40.0% | |
TATCCGGAGAAAGAAAGGAT+CGG | - | chr7.1:31425358-31425377 | None:intergenic | 40.0% | |
TCCAGGATACTTATACATCC+AGG | - | chr7.1:31425598-31425617 | None:intergenic | 40.0% | |
TGTCTGTTAGCTCACAAAAC+CGG | + | chr7.1:31425444-31425463 | MS.gene98698:intron | 40.0% | |
TTAGCTATGTCAAGAGCCTT+TGG | + | chr7.1:31424952-31424971 | MS.gene98698:CDS | 40.0% | |
TTGACTATGAAGCACGGATA+CGG | + | chr7.1:31425150-31425169 | MS.gene98698:intron | 40.0% | |
TTGTGTATCCGGAGAAAGAA+AGG | - | chr7.1:31425363-31425382 | None:intergenic | 40.0% | |
!! | CTCATATTTCTAGCAAGCCT+TGG | - | chr7.1:31425852-31425871 | None:intergenic | 40.0% |
!! | TTTGCTGCTGTTGACTTTCT+TGG | - | chr7.1:31425549-31425568 | None:intergenic | 40.0% |
!!! | TGTTGTTTTGGCAACTGATG+GGG | + | chr7.1:31425053-31425072 | MS.gene98698:CDS | 40.0% |
AACATCCTTCCCATGAAGCA+AGG | - | chr7.1:31424343-31424362 | None:intergenic | 45.0% | |
AATCCAGGACAGTCATCATC+AGG | - | chr7.1:31424934-31424953 | None:intergenic | 45.0% | |
ACATCCTTCCCATGAAGCAA+GGG | - | chr7.1:31424342-31424361 | None:intergenic | 45.0% | |
ACTCCGATCCTTTCTTTCTC+CGG | + | chr7.1:31425352-31425371 | MS.gene98698:intron | 45.0% | |
ATATCCCTTGCTTCATGGGA+AGG | + | chr7.1:31424335-31424354 | MS.gene98698:CDS | 45.0% | |
CTGGTCACCCTGCAATTTAT+CGG | - | chr7.1:31424636-31424655 | None:intergenic | 45.0% | |
GAGTGGAACTGGATGAAGAA+TGG | + | chr7.1:31425781-31425800 | MS.gene98698:CDS | 45.0% | |
GCCTGGATGTATAAGTATCC+TGG | + | chr7.1:31425594-31425613 | MS.gene98698:CDS | 45.0% | |
GCTCTTGACATAGCTAATCC+AGG | - | chr7.1:31424949-31424968 | None:intergenic | 45.0% | |
GTTGAAACCGAGGTGAATGA+TGG | + | chr7.1:31423434-31423453 | MS.gene98698:CDS | 45.0% | |
TCGTGCAGTTCTTTGCACAA+GGG | + | chr7.1:31424682-31424701 | MS.gene98698:CDS | 45.0% | |
TGATGCGGTTATTATTGCGG+TGG | - | chr7.1:31424310-31424329 | None:intergenic | 45.0% | |
TGGAAAAGTTGGAGTGGAAC+TGG | + | chr7.1:31425770-31425789 | MS.gene98698:CDS | 45.0% | |
TGGTCACCCTGCAATTTATC+GGG | - | chr7.1:31424635-31424654 | None:intergenic | 45.0% | |
TGTTGCTGGAAAAGTTGGAG+TGG | + | chr7.1:31425764-31425783 | MS.gene98698:CDS | 45.0% | |
! | ACACATCTGGTGATGCAATG+AGG | - | chr7.1:31425002-31425021 | None:intergenic | 45.0% |
!!! | CAATCGTCGATTTTCGATCC+AGG | - | chr7.1:31425615-31425634 | None:intergenic | 45.0% |
ACACGACACCTGTCTGACAT+GGG | + | chr7.1:31425271-31425290 | MS.gene98698:intron | 50.0% | |
AGCCACGATGTTGCTCTTAG+AGG | + | chr7.1:31423398-31423417 | MS.gene98698:CDS | 50.0% | |
ATGAAGCACGGATACGGACA+CGG | + | chr7.1:31425156-31425175 | MS.gene98698:intron | 50.0% | |
CACGATGTTGCTCTTAGAGG+AGG | + | chr7.1:31423401-31423420 | MS.gene98698:CDS | 50.0% | |
CAGGACTATGCTGGAGAAGA+AGG | + | chr7.1:31424113-31424132 | MS.gene98698:intron | 50.0% | |
CTATGCTGGAGAAGAAGGCA+TGG | + | chr7.1:31424118-31424137 | MS.gene98698:CDS | 50.0% | |
CTCGTGCAGTTCTTTGCACA+AGG | + | chr7.1:31424681-31424700 | MS.gene98698:CDS | 50.0% | |
GATGTTGCTCTTAGAGGAGG+AGG | + | chr7.1:31423404-31423423 | MS.gene98698:CDS | 50.0% | |
GTCTTCTGTGGCGTGTTTGA+CGG | + | chr7.1:31424140-31424159 | MS.gene98698:CDS | 50.0% | |
TAAAGCGCGCTGTTAAAGCC+TGG | + | chr7.1:31425577-31425596 | MS.gene98698:CDS | 50.0% | |
TATGAAGCACGGAGACTCCT+GGG | - | chr7.1:31425309-31425328 | None:intergenic | 50.0% | |
TGCGAAACTTTGTGGCCTAG+AGG | - | chr7.1:31424173-31424192 | None:intergenic | 50.0% | |
TGTCTCTGTGACTGCAGTTG+AGG | - | chr7.1:31424574-31424593 | None:intergenic | 50.0% | |
TTTCGCTGCGGATGAAGAAC+CGG | + | chr7.1:31424888-31424907 | MS.gene98698:CDS | 50.0% | |
TTTGACGGTCATGGTCCTCT+AGG | + | chr7.1:31424155-31424174 | MS.gene98698:CDS | 50.0% | |
! | ATGCCTGATGATGACTGTCC+TGG | + | chr7.1:31424928-31424947 | MS.gene98698:CDS | 50.0% |
! | CTCCTCTAAGAGCAACATCG+TGG | - | chr7.1:31423403-31423422 | None:intergenic | 50.0% |
! | GAAGAAGGCATGGTCTTCTG+TGG | + | chr7.1:31424128-31424147 | MS.gene98698:CDS | 50.0% |
! | TGAAGGAAGGGTTTTCGCTG+CGG | + | chr7.1:31424876-31424895 | MS.gene98698:CDS | 50.0% |
!! | CAGGGTGACCAGTTGATAGT+TGG | + | chr7.1:31424644-31424663 | MS.gene98698:intron | 50.0% |
AGGAGGCAGAGTTGAAACCG+AGG | + | chr7.1:31423424-31423443 | MS.gene98698:CDS | 55.0% | |
ATGGGGACACGTCTTATCCC+AGG | + | chr7.1:31425289-31425308 | MS.gene98698:intron | 55.0% | |
CACGACACCTGTCTGACATG+GGG | + | chr7.1:31425272-31425291 | MS.gene98698:intron | 55.0% | |
CTATGAAGCACGGAGACTCC+TGG | - | chr7.1:31425310-31425329 | None:intergenic | 55.0% | |
GACACGACACCTGTCTGACA+TGG | + | chr7.1:31425270-31425289 | MS.gene98698:intron | 55.0% | |
GTCAGTGTCTGTGTCGTGTC+CGG | - | chr7.1:31425185-31425204 | None:intergenic | 55.0% | |
GTTGCTCTTAGAGGAGGAGG+AGG | + | chr7.1:31423407-31423426 | MS.gene98698:CDS | 55.0% | |
TGTGGCGTGTTTGACGGTCA+TGG | + | chr7.1:31424146-31424165 | MS.gene98698:CDS | 55.0% | |
ACGGATACGGACACGGACAC+CGG | + | chr7.1:31425163-31425182 | MS.gene98698:intron | 60.0% | |
CAGACACTGACACGCCGACA+CGG | + | chr7.1:31425194-31425213 | MS.gene98698:intron | 60.0% | |
GACGTGTCCCCATGTCAGAC+AGG | - | chr7.1:31425282-31425301 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 31423383 | 31425908 | 31423383 | ID=MS.gene98698 |
chr7.1 | mRNA | 31423383 | 31425908 | 31423383 | ID=MS.gene98698.t1;Parent=MS.gene98698 |
chr7.1 | exon | 31423383 | 31423625 | 31423383 | ID=MS.gene98698.t1.exon1;Parent=MS.gene98698.t1 |
chr7.1 | CDS | 31423383 | 31423625 | 31423383 | ID=cds.MS.gene98698.t1;Parent=MS.gene98698.t1 |
chr7.1 | exon | 31424116 | 31424460 | 31424116 | ID=MS.gene98698.t1.exon2;Parent=MS.gene98698.t1 |
chr7.1 | CDS | 31424116 | 31424460 | 31424116 | ID=cds.MS.gene98698.t1;Parent=MS.gene98698.t1 |
chr7.1 | exon | 31424647 | 31424761 | 31424647 | ID=MS.gene98698.t1.exon3;Parent=MS.gene98698.t1 |
chr7.1 | CDS | 31424647 | 31424761 | 31424647 | ID=cds.MS.gene98698.t1;Parent=MS.gene98698.t1 |
chr7.1 | exon | 31424851 | 31425074 | 31424851 | ID=MS.gene98698.t1.exon4;Parent=MS.gene98698.t1 |
chr7.1 | CDS | 31424851 | 31425074 | 31424851 | ID=cds.MS.gene98698.t1;Parent=MS.gene98698.t1 |
chr7.1 | exon | 31425495 | 31425908 | 31425495 | ID=MS.gene98698.t1.exon5;Parent=MS.gene98698.t1 |
chr7.1 | CDS | 31425495 | 31425908 | 31425495 | ID=cds.MS.gene98698.t1;Parent=MS.gene98698.t1 |
Gene Sequence |
Protein sequence |