AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08994


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08994.t1 MTR_8g081020 100.000 381 0 0 1 381 1 381 0.0 754
MS.gene08994.t1 MTR_4g088495 100.000 380 0 0 1 380 77 456 0.0 751
MS.gene08994.t1 MTR_4g088495 100.000 380 0 0 1 380 153 532 0.0 751
MS.gene08994.t1 MTR_4g088495 100.000 380 0 0 1 380 229 608 0.0 751
MS.gene08994.t1 MTR_4g088495 100.000 380 0 0 1 380 305 684 0.0 751
MS.gene08994.t1 MTR_4g088495 100.000 380 0 0 1 380 381 760 0.0 751
MS.gene08994.t1 MTR_4g088495 100.000 380 0 0 1 380 457 836 0.0 751
MS.gene08994.t1 MTR_4g088495 99.737 380 1 0 1 380 1 380 0.0 748
MS.gene08994.t1 MTR_4g081010 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 MTR_4g081010 100.000 380 0 0 1 380 77 456 0.0 751
MS.gene08994.t1 MTR_4g081010 100.000 380 0 0 1 380 153 532 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 77 456 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 153 532 0.0 751
MS.gene08994.t1 MTR_4g080797 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 MTR_4g081010 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 77 456 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 77 456 0.0 751
MS.gene08994.t1 MTR_8g018230 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 MTR_4g091580 99.737 380 1 0 1 380 1 380 0.0 750
MS.gene08994.t1 MTR_4g091580 99.474 380 2 0 1 380 1 380 0.0 747
MS.gene08994.t1 MTR_4g091580 99.474 380 2 0 1 380 77 456 0.0 747
MS.gene08994.t1 MTR_4g091580 99.474 380 2 0 1 380 153 532 0.0 747
MS.gene08994.t1 MTR_4g081010 100.000 304 0 0 1 304 1 304 0.0 602
MS.gene08994.t1 MTR_4g081010 100.000 304 0 0 77 380 1 304 0.0 602
MS.gene08994.t1 MTR_6g061930 94.098 305 3 1 1 305 1 290 0.0 559
MS.gene08994.t1 MTR_6g061930 94.408 304 2 1 77 380 1 289 0.0 559
MS.gene08994.t1 MTR_8g018230 88.197 305 1 1 1 305 1 270 0.0 515
MS.gene08994.t1 MTR_8g018230 88.487 304 0 1 77 380 1 269 0.0 515
MS.gene08994.t1 MTR_4g081010 100.000 244 0 0 1 244 1 244 7.03e-173 483
MS.gene08994.t1 MTR_4g081010 100.000 244 0 0 77 320 1 244 7.03e-173 483
MS.gene08994.t1 MTR_4g081010 100.000 228 0 0 153 380 1 228 2.62e-161 454
MS.gene08994.t1 MTR_7g116360 99.563 229 1 0 1 229 1 229 1.06e-161 452
MS.gene08994.t1 MTR_7g116360 99.563 229 1 0 77 305 1 229 1.06e-161 452
MS.gene08994.t1 MTR_7g116360 100.000 228 0 0 153 380 1 228 1.40e-161 452
MS.gene08994.t1 MTR_7g116360 99.563 229 1 0 1 229 49 277 1.35e-161 454
MS.gene08994.t1 MTR_7g116360 99.563 229 1 0 77 305 49 277 1.35e-161 454
MS.gene08994.t1 MTR_7g116360 100.000 228 0 0 153 380 49 276 1.82e-161 454
MS.gene08994.t1 MTR_1g066390 100.000 228 0 0 1 228 1 228 2.48e-161 452
MS.gene08994.t1 MTR_1g066390 100.000 228 0 0 77 304 1 228 2.48e-161 452
MS.gene08994.t1 MTR_1g066390 100.000 228 0 0 153 380 1 228 2.48e-161 452
MS.gene08994.t1 MTR_4g088485 93.013 229 1 1 1 229 1 214 1.53e-146 414
MS.gene08994.t1 MTR_4g088485 93.013 229 1 1 77 305 1 214 1.53e-146 414
MS.gene08994.t1 MTR_4g088485 93.421 228 0 1 153 380 1 213 2.01e-146 413
MS.gene08994.t1 MTR_4g080920 89.035 228 25 0 1 228 1 228 9.17e-142 402
MS.gene08994.t1 MTR_4g080920 89.035 228 25 0 77 304 1 228 9.17e-142 402
MS.gene08994.t1 MTR_4g080920 89.035 228 25 0 153 380 1 228 9.17e-142 402
MS.gene08994.t1 MTR_8g479250 67.949 312 53 6 1 300 1 277 2.68e-120 350
MS.gene08994.t1 MTR_8g479250 67.949 312 53 6 77 376 1 277 2.68e-120 350
MS.gene08994.t1 MTR_8g479250 65.417 240 47 5 153 380 1 216 1.88e-82 254
MS.gene08994.t1 MTR_5g092700 80.392 153 30 0 229 381 1 153 3.85e-82 248
MS.gene08994.t1 MTR_5g092700 80.263 152 30 0 1 152 1 152 3.81e-81 245
MS.gene08994.t1 MTR_5g092700 80.263 152 30 0 77 228 1 152 3.81e-81 245
MS.gene08994.t1 MTR_5g092700 80.263 152 30 0 153 304 1 152 3.81e-81 245
MS.gene08994.t1 MTR_4g073580 80.392 153 30 0 229 381 1 153 3.85e-82 248
MS.gene08994.t1 MTR_4g073580 80.263 152 30 0 1 152 1 152 3.81e-81 245
MS.gene08994.t1 MTR_4g073580 80.263 152 30 0 77 228 1 152 3.81e-81 245
MS.gene08994.t1 MTR_4g073580 80.263 152 30 0 153 304 1 152 3.81e-81 245
MS.gene08994.t1 MTR_4g073580 67.213 183 30 1 229 381 1 183 1.20e-75 232
MS.gene08994.t1 MTR_4g073580 67.033 182 30 1 1 152 1 182 1.17e-74 229
MS.gene08994.t1 MTR_4g073580 67.033 182 30 1 77 228 1 182 1.17e-74 229
MS.gene08994.t1 MTR_4g073580 67.033 182 30 1 153 304 1 182 1.17e-74 229
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 1 77 1 77 3.18e-47 157
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 77 153 1 77 3.18e-47 157
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 153 229 1 77 3.18e-47 157
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 229 305 1 77 3.18e-47 157
MS.gene08994.t1 MTR_3g092130 100.000 76 0 0 305 380 1 76 4.88e-47 157
MS.gene08994.t1 MTR_7g105080 98.701 77 1 0 1 77 1 77 5.25e-47 157
MS.gene08994.t1 MTR_7g105080 98.701 77 1 0 77 153 1 77 5.25e-47 157
MS.gene08994.t1 MTR_7g105080 98.701 77 1 0 153 229 1 77 5.25e-47 157
MS.gene08994.t1 MTR_7g105080 98.701 77 1 0 229 305 1 77 5.25e-47 157
MS.gene08994.t1 MTR_7g105080 100.000 76 0 0 305 380 1 76 7.88e-47 156
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 1 77 1 77 5.25e-47 157
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 77 153 1 77 5.25e-47 157
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 153 229 1 77 5.25e-47 157
MS.gene08994.t1 MTR_3g092130 98.701 77 1 0 229 305 1 77 5.25e-47 157
MS.gene08994.t1 MTR_3g092130 100.000 76 0 0 305 380 1 76 7.88e-47 156
MS.gene08994.t1 MTR_1g059690 98.701 77 1 0 1 77 1 77 5.25e-47 157
MS.gene08994.t1 MTR_1g059690 98.701 77 1 0 77 153 1 77 5.25e-47 157
MS.gene08994.t1 MTR_1g059690 98.701 77 1 0 153 229 1 77 5.25e-47 157
MS.gene08994.t1 MTR_1g059690 98.701 77 1 0 229 305 1 77 5.25e-47 157
MS.gene08994.t1 MTR_1g059690 100.000 76 0 0 305 380 1 76 7.88e-47 156
MS.gene08994.t1 MTR_5g033960 97.436 78 2 0 1 78 1 78 1.66e-46 156
MS.gene08994.t1 MTR_5g033960 97.436 78 2 0 77 154 1 78 1.66e-46 156
MS.gene08994.t1 MTR_5g033960 97.436 78 2 0 153 230 1 78 1.66e-46 156
MS.gene08994.t1 MTR_5g033960 97.436 78 2 0 229 306 1 78 1.66e-46 156
MS.gene08994.t1 MTR_5g033960 100.000 76 0 0 305 380 1 76 1.95e-46 156
MS.gene08994.t1 MTR_8g088060 97.436 78 2 0 1 78 1 78 1.73e-46 156
MS.gene08994.t1 MTR_8g088060 97.436 78 2 0 77 154 1 78 1.73e-46 156
MS.gene08994.t1 MTR_8g088060 97.436 78 2 0 153 230 1 78 1.73e-46 156
MS.gene08994.t1 MTR_8g088060 97.436 78 2 0 229 306 1 78 1.73e-46 156
MS.gene08994.t1 MTR_8g088060 100.000 76 0 0 305 380 1 76 2.01e-46 156
MS.gene08994.t1 MTR_1g046640 71.053 76 22 0 1 76 240 315 3.49e-26 107
MS.gene08994.t1 MTR_1g046640 71.053 76 22 0 77 152 240 315 3.49e-26 107
MS.gene08994.t1 MTR_1g046640 71.053 76 22 0 153 228 240 315 3.49e-26 107
MS.gene08994.t1 MTR_1g046640 71.053 76 22 0 229 304 240 315 3.49e-26 107
MS.gene08994.t1 MTR_1g046640 71.053 76 22 0 305 380 240 315 3.49e-26 107
MS.gene08994.t1 MTR_5g076660 63.855 83 30 0 67 149 256 338 1.79e-25 105
MS.gene08994.t1 MTR_5g076660 63.855 83 30 0 143 225 256 338 1.79e-25 105
MS.gene08994.t1 MTR_5g076660 63.855 83 30 0 219 301 256 338 1.79e-25 105
MS.gene08994.t1 MTR_5g076660 63.855 83 30 0 295 377 256 338 1.79e-25 105
MS.gene08994.t1 MTR_5g076660 69.863 73 22 0 1 73 266 338 3.35e-25 105
MS.gene08994.t1 MTR_5g076810 68.831 77 23 1 1 76 194 270 1.93e-25 104
MS.gene08994.t1 MTR_5g076810 68.831 77 23 1 77 152 194 270 1.93e-25 104
MS.gene08994.t1 MTR_5g076810 68.831 77 23 1 153 228 194 270 1.93e-25 104
MS.gene08994.t1 MTR_5g076810 68.831 77 23 1 229 304 194 270 1.93e-25 104
MS.gene08994.t1 MTR_5g076810 68.831 77 23 1 305 380 194 270 1.93e-25 104
MS.gene08994.t1 MTR_5g061310 60.000 75 30 0 1 75 2 76 4.47e-23 92.0
MS.gene08994.t1 MTR_5g061310 60.000 75 30 0 77 151 2 76 4.47e-23 92.0
MS.gene08994.t1 MTR_5g061310 60.000 75 30 0 153 227 2 76 4.47e-23 92.0
MS.gene08994.t1 MTR_5g061310 60.000 75 30 0 229 303 2 76 4.47e-23 92.0
MS.gene08994.t1 MTR_5g061310 60.000 75 30 0 305 379 2 76 4.47e-23 92.0
MS.gene08994.t1 MTR_5g067400 68.421 76 24 0 1 76 241 316 7.48e-23 98.2
MS.gene08994.t1 MTR_5g067400 68.421 76 24 0 77 152 241 316 7.48e-23 98.2
MS.gene08994.t1 MTR_5g067400 68.421 76 24 0 153 228 241 316 7.48e-23 98.2
MS.gene08994.t1 MTR_5g067400 68.421 76 24 0 229 304 241 316 7.48e-23 98.2
MS.gene08994.t1 MTR_5g067400 68.421 76 24 0 305 380 241 316 7.48e-23 98.2
MS.gene08994.t1 MTR_5g076370 59.036 83 34 0 67 149 257 339 1.43e-21 94.7
MS.gene08994.t1 MTR_5g076370 59.036 83 34 0 143 225 257 339 1.43e-21 94.7
MS.gene08994.t1 MTR_5g076370 59.036 83 34 0 219 301 257 339 1.43e-21 94.7
MS.gene08994.t1 MTR_5g076370 59.036 83 34 0 295 377 257 339 1.43e-21 94.7
MS.gene08994.t1 MTR_5g076370 64.384 73 26 0 1 73 267 339 2.52e-21 94.4
MS.gene08994.t1 MTR_5g076505 61.333 75 29 0 1 75 240 314 1.90e-20 91.3
MS.gene08994.t1 MTR_5g076505 61.333 75 29 0 77 151 240 314 1.90e-20 91.3
MS.gene08994.t1 MTR_5g076505 61.333 75 29 0 153 227 240 314 1.90e-20 91.3
MS.gene08994.t1 MTR_5g076505 61.333 75 29 0 229 303 240 314 1.90e-20 91.3
MS.gene08994.t1 MTR_5g076505 61.333 75 29 0 305 379 240 314 1.90e-20 91.3
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 1 76 171 246 2.69e-20 89.4
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 77 152 171 246 2.69e-20 89.4
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 153 228 171 246 2.69e-20 89.4
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 229 304 171 246 2.69e-20 89.4
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 305 380 171 246 2.69e-20 89.4
MS.gene08994.t1 MTR_2g038430 61.333 75 29 0 1 75 268 342 3.37e-20 90.9
MS.gene08994.t1 MTR_2g038430 61.333 75 29 0 77 151 268 342 3.37e-20 90.9
MS.gene08994.t1 MTR_2g038430 61.333 75 29 0 153 227 268 342 3.37e-20 90.9
MS.gene08994.t1 MTR_2g038430 61.333 75 29 0 229 303 268 342 3.37e-20 90.9
MS.gene08994.t1 MTR_2g038430 61.333 75 29 0 305 379 268 342 3.37e-20 90.9
MS.gene08994.t1 MTR_5g076720 65.333 75 26 0 1 75 315 389 3.38e-20 91.7
MS.gene08994.t1 MTR_5g076720 65.333 75 26 0 77 151 315 389 3.38e-20 91.7
MS.gene08994.t1 MTR_5g076720 65.333 75 26 0 153 227 315 389 3.38e-20 91.7
MS.gene08994.t1 MTR_5g076720 65.333 75 26 0 229 303 315 389 3.38e-20 91.7
MS.gene08994.t1 MTR_5g076720 65.333 75 26 0 305 379 315 389 3.38e-20 91.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 5.21e-20 90.1
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 77 152 240 315 5.21e-20 90.1
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 153 228 240 315 5.21e-20 90.1
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 229 304 240 315 5.21e-20 90.1
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 305 380 240 315 5.21e-20 90.1
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 6.71e-20 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 77 152 240 315 6.71e-20 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 153 228 240 315 6.71e-20 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 229 304 240 315 6.71e-20 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 305 380 240 315 6.71e-20 89.7
MS.gene08994.t1 MTR_5g076740 57.692 78 32 1 75 151 84 161 7.64e-20 86.3
MS.gene08994.t1 MTR_5g076740 57.692 78 32 1 151 227 84 161 7.64e-20 86.3
MS.gene08994.t1 MTR_5g076740 57.692 78 32 1 227 303 84 161 7.64e-20 86.3
MS.gene08994.t1 MTR_5g076740 57.692 78 32 1 303 379 84 161 7.64e-20 86.3
MS.gene08994.t1 MTR_5g076740 59.211 76 30 1 1 75 86 161 8.97e-20 85.9
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 1 76 271 346 1.04e-19 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 77 152 271 346 1.04e-19 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 153 228 271 346 1.04e-19 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 229 304 271 346 1.04e-19 89.7
MS.gene08994.t1 MTR_1g046650 57.895 76 32 0 305 380 271 346 1.04e-19 89.7
MS.gene08994.t1 MTR_2g038420 60.000 75 30 0 1 75 260 334 1.68e-19 89.0
MS.gene08994.t1 MTR_2g038420 60.000 75 30 0 77 151 260 334 1.68e-19 89.0
MS.gene08994.t1 MTR_2g038420 60.000 75 30 0 153 227 260 334 1.68e-19 89.0
MS.gene08994.t1 MTR_2g038420 60.000 75 30 0 229 303 260 334 1.68e-19 89.0
MS.gene08994.t1 MTR_2g038420 60.000 75 30 0 305 379 260 334 1.68e-19 89.0
MS.gene08994.t1 MTR_4g080783 53.409 88 11 1 44 101 7 94 2.08e-19 82.8
MS.gene08994.t1 MTR_4g080783 53.409 88 11 1 120 177 7 94 2.08e-19 82.8
MS.gene08994.t1 MTR_4g080783 53.409 88 11 1 196 253 7 94 2.08e-19 82.8
MS.gene08994.t1 MTR_4g080783 53.409 88 11 1 272 329 7 94 2.08e-19 82.8
MS.gene08994.t1 MTR_7g094390 54.118 85 39 0 67 151 392 476 1.25e-18 87.8
MS.gene08994.t1 MTR_7g094390 54.118 85 39 0 143 227 392 476 1.25e-18 87.8
MS.gene08994.t1 MTR_7g094390 54.118 85 39 0 219 303 392 476 1.25e-18 87.8
MS.gene08994.t1 MTR_7g094390 54.118 85 39 0 295 379 392 476 1.25e-18 87.8
MS.gene08994.t1 MTR_7g094390 58.667 75 31 0 1 75 402 476 1.84e-18 87.0
MS.gene08994.t1 MTR_5g076520 57.333 75 31 1 1 74 244 318 1.97e-17 82.8
MS.gene08994.t1 MTR_5g076520 57.333 75 31 1 77 150 244 318 1.97e-17 82.8
MS.gene08994.t1 MTR_5g076520 57.333 75 31 1 153 226 244 318 1.97e-17 82.8
MS.gene08994.t1 MTR_5g076520 57.333 75 31 1 229 302 244 318 1.97e-17 82.8
MS.gene08994.t1 MTR_5g076520 57.333 75 31 1 305 378 244 318 1.97e-17 82.8
MS.gene08994.t1 MTR_7g024290 60.526 76 29 1 1 75 241 316 1.22e-16 80.5
MS.gene08994.t1 MTR_7g024290 60.526 76 29 1 77 151 241 316 1.22e-16 80.5
MS.gene08994.t1 MTR_7g024290 60.526 76 29 1 153 227 241 316 1.22e-16 80.5
MS.gene08994.t1 MTR_7g024290 60.526 76 29 1 229 303 241 316 1.22e-16 80.5
MS.gene08994.t1 MTR_7g024290 60.526 76 29 1 305 379 241 316 1.22e-16 80.5
MS.gene08994.t1 MTR_5g061290 53.333 75 35 0 1 75 252 326 6.17e-16 78.6
MS.gene08994.t1 MTR_5g061290 53.333 75 35 0 77 151 252 326 6.17e-16 78.6
MS.gene08994.t1 MTR_5g061290 53.333 75 35 0 153 227 252 326 6.17e-16 78.6
MS.gene08994.t1 MTR_5g061290 53.333 75 35 0 229 303 252 326 6.17e-16 78.6
MS.gene08994.t1 MTR_5g061290 53.333 75 35 0 305 379 252 326 6.17e-16 78.6
MS.gene08994.t1 MTR_4g009980 55.224 67 30 0 9 75 4 70 7.79e-16 72.0
MS.gene08994.t1 MTR_4g009980 55.224 67 30 0 85 151 4 70 7.79e-16 72.0
MS.gene08994.t1 MTR_4g009980 55.224 67 30 0 161 227 4 70 7.79e-16 72.0
MS.gene08994.t1 MTR_4g009980 55.224 67 30 0 237 303 4 70 7.79e-16 72.0
MS.gene08994.t1 MTR_4g009980 55.224 67 30 0 313 379 4 70 7.79e-16 72.0
MS.gene08994.t1 MTR_8g027610 31.953 169 103 6 65 226 26 189 1.66e-15 78.6
MS.gene08994.t1 MTR_8g027610 31.953 169 103 6 141 302 26 189 1.66e-15 78.6
MS.gene08994.t1 MTR_8g027610 31.953 169 103 6 217 378 26 189 1.66e-15 78.6
MS.gene08994.t1 MTR_8g027610 33.974 156 91 6 3 150 38 189 5.23e-15 77.0
MS.gene08994.t1 MTR_3g091400 32.484 157 102 4 72 225 22 177 4.12e-15 77.4
MS.gene08994.t1 MTR_3g091400 32.484 157 102 4 148 301 22 177 4.12e-15 77.4
MS.gene08994.t1 MTR_3g091400 32.484 157 102 4 224 377 22 177 4.12e-15 77.4
MS.gene08994.t1 MTR_3g091400 33.562 146 94 3 7 149 32 177 6.19e-15 76.6
MS.gene08994.t1 MTR_2g088760 26.522 230 144 5 15 221 14 241 9.23e-15 73.9
MS.gene08994.t1 MTR_2g088760 26.522 230 144 5 167 373 14 241 9.23e-15 73.9
MS.gene08994.t1 MTR_2g088760 31.724 145 86 4 243 376 14 156 7.20e-11 62.4
MS.gene08994.t1 MTR_7g117395 32.278 158 100 5 1 152 37 193 6.34e-14 73.6
MS.gene08994.t1 MTR_7g117395 32.278 158 100 5 77 228 37 193 6.34e-14 73.6
MS.gene08994.t1 MTR_7g117395 32.278 158 100 5 153 304 37 193 6.34e-14 73.6
MS.gene08994.t1 MTR_7g117395 32.278 158 100 5 229 380 37 193 6.34e-14 73.6
MS.gene08994.t1 MTR_5g076760 58.621 58 24 0 10 67 4 61 1.17e-13 66.2
MS.gene08994.t1 MTR_5g076760 58.621 58 24 0 86 143 4 61 1.17e-13 66.2
MS.gene08994.t1 MTR_5g076760 58.621 58 24 0 162 219 4 61 1.17e-13 66.2
MS.gene08994.t1 MTR_5g076760 58.621 58 24 0 238 295 4 61 1.17e-13 66.2
MS.gene08994.t1 MTR_5g076760 58.621 58 24 0 314 371 4 61 1.17e-13 66.2
MS.gene08994.t1 MTR_5g076780 56.452 62 27 0 13 74 2 63 1.40e-13 65.5
MS.gene08994.t1 MTR_5g076780 56.452 62 27 0 89 150 2 63 1.40e-13 65.5
MS.gene08994.t1 MTR_5g076780 56.452 62 27 0 165 226 2 63 1.40e-13 65.5
MS.gene08994.t1 MTR_5g076780 56.452 62 27 0 241 302 2 63 1.40e-13 65.5
MS.gene08994.t1 MTR_5g076780 56.452 62 27 0 317 378 2 63 1.40e-13 65.5
MS.gene08994.t1 MTR_5g076350 50.000 74 36 1 1 73 8 81 1.00e-12 63.9
MS.gene08994.t1 MTR_5g076350 50.000 74 36 1 77 149 8 81 1.00e-12 63.9
MS.gene08994.t1 MTR_5g076350 50.000 74 36 1 153 225 8 81 1.00e-12 63.9
MS.gene08994.t1 MTR_5g076350 50.000 74 36 1 229 301 8 81 1.00e-12 63.9
MS.gene08994.t1 MTR_5g076350 50.000 74 36 1 305 377 8 81 1.00e-12 63.9
MS.gene08994.t1 MTR_5g076340 52.000 75 34 2 1 73 9 83 5.33e-12 61.6
MS.gene08994.t1 MTR_5g076340 52.000 75 34 2 77 149 9 83 5.33e-12 61.6
MS.gene08994.t1 MTR_5g076340 52.000 75 34 2 153 225 9 83 5.33e-12 61.6
MS.gene08994.t1 MTR_5g076340 52.000 75 34 2 229 301 9 83 5.33e-12 61.6
MS.gene08994.t1 MTR_5g076340 52.000 75 34 2 305 377 9 83 5.33e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08994.t1 AT5G20620 99.738 381 1 0 1 381 1 381 0.0 752
MS.gene08994.t1 AT4G05320 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 AT4G05320 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 AT4G05320 100.000 380 0 0 1 380 77 456 0.0 751
MS.gene08994.t1 AT4G05320 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 AT4G05320 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 AT4G05320 100.000 380 0 0 1 380 77 456 0.0 751
MS.gene08994.t1 AT4G05320 100.000 380 0 0 1 380 1 380 0.0 751
MS.gene08994.t1 AT5G03240 99.672 305 1 0 77 381 1 305 0.0 602
MS.gene08994.t1 AT5G03240 100.000 304 0 0 1 304 1 304 0.0 602
MS.gene08994.t1 AT5G03240 99.672 305 1 0 77 381 1 305 0.0 602
MS.gene08994.t1 AT5G03240 100.000 304 0 0 1 304 1 304 0.0 602
MS.gene08994.t1 AT5G03240 99.672 305 1 0 77 381 1 305 0.0 602
MS.gene08994.t1 AT5G03240 100.000 304 0 0 1 304 1 304 0.0 602
MS.gene08994.t1 AT5G20620 99.672 305 1 0 77 381 1 305 0.0 602
MS.gene08994.t1 AT5G20620 100.000 304 0 0 1 304 1 304 0.0 602
MS.gene08994.t1 AT4G05320 99.672 305 1 0 1 305 1 305 0.0 602
MS.gene08994.t1 AT4G05320 100.000 304 0 0 77 380 1 304 0.0 602
MS.gene08994.t1 AT4G05320 99.672 305 1 0 1 305 1 305 0.0 602
MS.gene08994.t1 AT4G05320 100.000 304 0 0 77 380 1 304 0.0 602
MS.gene08994.t1 AT4G02890 99.672 305 1 0 1 305 1 305 0.0 602
MS.gene08994.t1 AT4G02890 100.000 304 0 0 77 380 1 304 0.0 602
MS.gene08994.t1 AT4G02890 99.672 305 1 0 1 305 1 305 0.0 602
MS.gene08994.t1 AT4G02890 100.000 304 0 0 77 380 1 304 0.0 602
MS.gene08994.t1 AT1G65350 93.417 319 6 2 77 381 1 318 0.0 571
MS.gene08994.t1 AT1G65350 93.711 318 5 2 1 304 1 317 0.0 571
MS.gene08994.t1 AT3G09790 78.149 389 71 4 1 375 3 391 0.0 567
MS.gene08994.t1 AT3G09790 74.619 394 82 5 1 380 79 468 0.0 541
MS.gene08994.t1 AT3G09790 71.939 392 92 4 1 378 238 625 2.84e-179 513
MS.gene08994.t1 AT3G09790 69.327 401 98 6 1 380 155 551 2.83e-174 500
MS.gene08994.t1 AT3G09790 89.474 152 16 0 229 380 3 154 1.42e-83 267
MS.gene08994.t1 AT3G09790 78.149 389 71 4 1 375 3 391 0.0 567
MS.gene08994.t1 AT3G09790 74.619 394 82 5 1 380 79 468 0.0 541
MS.gene08994.t1 AT3G09790 71.939 392 92 4 1 378 238 625 2.84e-179 513
MS.gene08994.t1 AT3G09790 69.327 401 98 6 1 380 155 551 2.83e-174 500
MS.gene08994.t1 AT3G09790 89.474 152 16 0 229 380 3 154 1.42e-83 267
MS.gene08994.t1 AT5G37640 90.196 306 29 1 76 380 2 307 0.0 538
MS.gene08994.t1 AT5G37640 90.492 305 28 1 1 304 3 307 0.0 538
MS.gene08994.t1 AT4G05050 99.563 229 1 0 1 229 1 229 1.11e-161 452
MS.gene08994.t1 AT4G05050 99.563 229 1 0 77 305 1 229 1.11e-161 452
MS.gene08994.t1 AT4G05050 100.000 228 0 0 153 380 1 228 1.47e-161 452
MS.gene08994.t1 AT4G05050 99.563 229 1 0 1 229 1 229 1.11e-161 452
MS.gene08994.t1 AT4G05050 99.563 229 1 0 77 305 1 229 1.11e-161 452
MS.gene08994.t1 AT4G05050 100.000 228 0 0 153 380 1 228 1.47e-161 452
MS.gene08994.t1 AT4G05050 99.563 229 1 0 1 229 1 229 1.11e-161 452
MS.gene08994.t1 AT4G05050 99.563 229 1 0 77 305 1 229 1.11e-161 452
MS.gene08994.t1 AT4G05050 100.000 228 0 0 153 380 1 228 1.47e-161 452
MS.gene08994.t1 AT4G02890 99.563 229 1 0 1 229 1 229 1.11e-161 452
MS.gene08994.t1 AT4G02890 99.563 229 1 0 77 305 1 229 1.11e-161 452
MS.gene08994.t1 AT4G02890 100.000 228 0 0 153 380 1 228 1.47e-161 452
MS.gene08994.t1 AT4G02890 99.563 229 1 0 1 229 1 229 1.11e-161 452
MS.gene08994.t1 AT4G02890 99.563 229 1 0 77 305 1 229 1.11e-161 452
MS.gene08994.t1 AT4G02890 100.000 228 0 0 153 380 1 228 1.47e-161 452
MS.gene08994.t1 AT1G55060 93.886 229 14 0 153 381 1 229 1.66e-152 429
MS.gene08994.t1 AT1G55060 94.298 228 13 0 1 228 1 228 2.35e-152 429
MS.gene08994.t1 AT1G55060 94.298 228 13 0 77 304 1 228 2.35e-152 429
MS.gene08994.t1 AT4G05050 99.346 153 1 0 1 153 1 153 6.53e-104 303
MS.gene08994.t1 AT4G05050 99.346 153 1 0 77 229 1 153 6.53e-104 303
MS.gene08994.t1 AT4G05050 99.346 153 1 0 153 305 1 153 6.53e-104 303
MS.gene08994.t1 AT4G05050 100.000 152 0 0 229 380 1 152 8.67e-104 303
MS.gene08994.t1 AT4G05320 99.346 153 1 0 1 153 1 153 6.53e-104 303
MS.gene08994.t1 AT4G05320 99.346 153 1 0 77 229 1 153 6.53e-104 303
MS.gene08994.t1 AT4G05320 99.346 153 1 0 153 305 1 153 6.53e-104 303
MS.gene08994.t1 AT4G05320 100.000 152 0 0 229 380 1 152 8.67e-104 303
MS.gene08994.t1 AT1G31340 78.846 156 33 0 1 156 1 156 1.11e-81 247
MS.gene08994.t1 AT1G31340 78.846 156 33 0 77 232 1 156 1.11e-81 247
MS.gene08994.t1 AT1G31340 78.846 156 33 0 153 308 1 156 1.11e-81 247
MS.gene08994.t1 AT1G31340 80.921 152 29 0 229 380 1 152 1.61e-81 246
MS.gene08994.t1 AT2G35635 79.739 153 31 0 1 153 1 153 6.17e-81 244
MS.gene08994.t1 AT2G35635 79.739 153 31 0 77 229 1 153 6.17e-81 244
MS.gene08994.t1 AT2G35635 79.739 153 31 0 153 305 1 153 6.17e-81 244
MS.gene08994.t1 AT2G35635 80.263 152 30 0 229 380 1 152 1.35e-80 244
MS.gene08994.t1 AT3G52590 98.701 77 1 0 1 77 1 77 5.74e-47 157
MS.gene08994.t1 AT3G52590 98.701 77 1 0 77 153 1 77 5.74e-47 157
MS.gene08994.t1 AT3G52590 98.701 77 1 0 153 229 1 77 5.74e-47 157
MS.gene08994.t1 AT3G52590 98.701 77 1 0 229 305 1 77 5.74e-47 157
MS.gene08994.t1 AT3G52590 100.000 76 0 0 305 380 1 76 7.91e-47 156
MS.gene08994.t1 AT2G36170 98.701 77 1 0 1 77 1 77 5.74e-47 157
MS.gene08994.t1 AT2G36170 98.701 77 1 0 77 153 1 77 5.74e-47 157
MS.gene08994.t1 AT2G36170 98.701 77 1 0 153 229 1 77 5.74e-47 157
MS.gene08994.t1 AT2G36170 98.701 77 1 0 229 305 1 77 5.74e-47 157
MS.gene08994.t1 AT2G36170 100.000 76 0 0 305 380 1 76 7.91e-47 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 1 78 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 77 154 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 153 230 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 229 306 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 100.000 76 0 0 305 380 1 76 2.19e-46 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 1 78 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 77 154 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 153 230 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 97.436 78 2 0 229 306 1 78 1.89e-46 156
MS.gene08994.t1 AT2G47110 100.000 76 0 0 305 380 1 76 2.19e-46 156
MS.gene08994.t1 AT3G62250 97.436 78 2 0 1 78 1 78 1.99e-46 156
MS.gene08994.t1 AT3G62250 97.436 78 2 0 77 154 1 78 1.99e-46 156
MS.gene08994.t1 AT3G62250 97.436 78 2 0 153 230 1 78 1.99e-46 156
MS.gene08994.t1 AT3G62250 97.436 78 2 0 229 306 1 78 1.99e-46 156
MS.gene08994.t1 AT3G62250 100.000 76 0 0 305 380 1 76 2.34e-46 156
MS.gene08994.t1 AT1G23410 100.000 76 0 0 1 76 1 76 3.91e-46 155
MS.gene08994.t1 AT1G23410 100.000 76 0 0 77 152 1 76 3.91e-46 155
MS.gene08994.t1 AT1G23410 100.000 76 0 0 153 228 1 76 3.91e-46 155
MS.gene08994.t1 AT1G23410 100.000 76 0 0 229 304 1 76 3.91e-46 155
MS.gene08994.t1 AT1G23410 100.000 76 0 0 305 380 1 76 3.91e-46 155
MS.gene08994.t1 AT1G53930 49.091 165 54 7 8 149 1 158 4.93e-33 121
MS.gene08994.t1 AT1G53930 49.091 165 54 7 84 225 1 158 4.93e-33 121
MS.gene08994.t1 AT1G53930 49.091 165 54 7 160 301 1 158 4.93e-33 121
MS.gene08994.t1 AT1G53930 49.091 165 54 7 236 377 1 158 4.93e-33 121
MS.gene08994.t1 AT1G53930 75.342 73 18 0 1 73 86 158 2.93e-30 114
MS.gene08994.t1 AT1G53950 41.463 164 55 3 71 227 14 143 6.06e-26 102
MS.gene08994.t1 AT1G53950 41.463 164 55 3 147 303 14 143 6.06e-26 102
MS.gene08994.t1 AT1G53950 41.463 164 55 3 223 379 14 143 6.06e-26 102
MS.gene08994.t1 AT1G53950 43.038 158 49 3 1 151 20 143 1.16e-25 101
MS.gene08994.t1 AT1G11980 54.545 77 35 0 1 77 1 77 3.56e-22 89.7
MS.gene08994.t1 AT1G11980 54.545 77 35 0 77 153 1 77 3.56e-22 89.7
MS.gene08994.t1 AT1G11980 54.545 77 35 0 153 229 1 77 3.56e-22 89.7
MS.gene08994.t1 AT1G11980 54.545 77 35 0 229 305 1 77 3.56e-22 89.7
MS.gene08994.t1 AT1G11980 55.263 76 34 0 305 380 1 76 4.19e-22 89.7
MS.gene08994.t1 AT2G46500 35.862 145 90 2 7 148 40 184 1.05e-18 87.4
MS.gene08994.t1 AT2G46500 35.862 145 90 2 159 300 40 184 1.05e-18 87.4
MS.gene08994.t1 AT2G46500 35.862 145 90 2 235 376 40 184 1.05e-18 87.4
MS.gene08994.t1 AT2G46500 35.862 145 90 2 7 148 40 184 1.48e-18 87.8
MS.gene08994.t1 AT2G46500 35.862 145 90 2 159 300 40 184 1.48e-18 87.8
MS.gene08994.t1 AT2G46500 35.862 145 90 2 235 376 40 184 1.48e-18 87.8
MS.gene08994.t1 AT2G46500 35.862 145 90 2 7 148 40 184 1.48e-18 87.8
MS.gene08994.t1 AT2G46500 35.862 145 90 2 159 300 40 184 1.48e-18 87.8
MS.gene08994.t1 AT2G46500 35.862 145 90 2 235 376 40 184 1.48e-18 87.8
MS.gene08994.t1 AT1G53945 38.356 146 53 3 1 143 1 112 4.83e-17 77.0
MS.gene08994.t1 AT1G53945 38.356 146 53 3 77 219 1 112 4.83e-17 77.0
MS.gene08994.t1 AT1G53945 38.356 146 53 3 153 295 1 112 4.83e-17 77.0
MS.gene08994.t1 AT1G53945 38.356 146 53 3 229 371 1 112 4.83e-17 77.0
MS.gene08994.t1 AT5G24240 33.793 145 91 3 7 147 38 181 2.91e-13 71.6
MS.gene08994.t1 AT5G24240 33.793 145 91 3 83 223 38 181 2.91e-13 71.6
MS.gene08994.t1 AT5G24240 33.793 145 91 3 159 299 38 181 2.91e-13 71.6
MS.gene08994.t1 AT5G24240 33.793 145 91 3 235 375 38 181 2.91e-13 71.6
MS.gene08994.t1 AT5G24240 33.793 145 91 3 7 147 38 181 2.91e-13 71.6
MS.gene08994.t1 AT5G24240 33.793 145 91 3 83 223 38 181 2.91e-13 71.6
MS.gene08994.t1 AT5G24240 33.793 145 91 3 159 299 38 181 2.91e-13 71.6
MS.gene08994.t1 AT5G24240 33.793 145 91 3 235 375 38 181 2.91e-13 71.6

Find 107 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAAGAGTTGACTCTTTC+TGG 0.089325 4.4:-15059907 None:intergenic
CCCTTCCTTGTCTTGAATCT+TGG 0.171342 4.4:-15059351 None:intergenic
CTCTAGGGTAATGGTCTTTC+CGG 0.231074 4.4:-15060206 None:intergenic
CTTGGCCTTAACATTGTCTA+TGG 0.287712 4.4:-15059333 None:intergenic
AATGAAGGGTAGACTCCTTT+TGG 0.330983 4.4:-15059451 None:intergenic
CAGCAGAGGTTGATCTTTGC+TGG 0.336237 4.4:+15060298 MS.gene08994:CDS
CCACCTTGTCCTTCGTTTGA+GGG 0.338161 4.4:+15060153 MS.gene08994:CDS
CAGCAGAGGCTCATCTTTGC+TGG 0.364047 4.4:+15059614 MS.gene08994:CDS
TCCACCTTGTCCTTCGTTTG+AGG 0.367383 4.4:+15060152 MS.gene08994:CDS
AAAATGAGCCTCTGCTGGTC+TGG 0.374589 4.4:-15059836 None:intergenic
CTTTGCTGGGAAGCAGTTAG+AGG 0.384639 4.4:+15060312 MS.gene08994:CDS
AAGATCAACCTCTGCTGATC+TGG 0.386006 4.4:-15060292 None:intergenic
GCTGGCAAGCAGCTGGAGGA+TGG 0.389940 4.4:+15059404 MS.gene08994:CDS
TACTGGCAAGACAATTACTT+TGG 0.412259 4.4:+15059976 MS.gene08994:CDS
AAATCAATCTTTGCTGGTCC+GGG 0.412287 4.4:-15060063 None:intergenic
AAAATGAGACGCTGCTGGTC+AGG 0.413921 4.4:-15059380 None:intergenic
AAAGGAGTCTACCCTTCATT+TGG 0.416312 4.4:+15059454 MS.gene08994:CDS
AAAATCAATCTTTGCTGGTC+CGG 0.427574 4.4:-15060064 None:intergenic
AAGATGAGCCTCTGCTGATC+TGG 0.428443 4.4:-15059608 None:intergenic
CTTTGCCTTGACATTGTCAA+TGG 0.446988 4.4:-15059561 None:intergenic
CACCTTGTATTGCGTCTTCG+TGG 0.468090 4.4:+15060382 MS.gene08994:CDS
CAATGTCAAGGCAAAGATAC+AGG 0.478494 4.4:+15059568 MS.gene08994:CDS
TGGCAAGACAATTACTTTGG+AGG 0.478789 4.4:+15059979 MS.gene08994:CDS
TGTTATAATCAGCAAGAGTC+CGG 0.483591 4.4:-15060111 None:intergenic
CATCTTGTGTTGCGACTTCG+TGG 0.484710 4.4:+15059698 MS.gene08994:CDS
CAATGTAAAGGCTAAGATAC+AGG 0.492297 4.4:+15059796 MS.gene08994:CDS
CAATGTAAAGGCTAAGATAC+AGG 0.492297 4.4:+15060024 MS.gene08994:CDS
GCTGGAAAGCAGCTCGAAGA+TGG 0.493968 4.4:+15059860 MS.gene08994:CDS
GCTGGAAAGCAGCTCGAAGA+TGG 0.493968 4.4:+15060088 MS.gene08994:CDS
CACCTTGTCCTTCGTTTGAG+GGG 0.494613 4.4:+15060154 MS.gene08994:CDS
GAAAGCAGCTCGAAGATGGC+CGG 0.496658 4.4:+15060092 MS.gene08994:CDS
CTGGCAAGCAGCTGGAGGAT+GGG 0.497232 4.4:+15059405 MS.gene08994:CDS
GCTGGAAAACAACTTGAAGA+TGG 0.499106 4.4:+15059632 MS.gene08994:CDS
GTCTGAACTTTCTACCTCTA+GGG 0.502569 4.4:-15060221 None:intergenic
TGTCTGAACTTTCTACCTCT+AGG 0.503974 4.4:-15060222 None:intergenic
ATCAACCTCTGCTGATCTGG+TGG 0.507286 4.4:-15060289 None:intergenic
GAAAGCAGCTCGAAGATGGC+AGG 0.513160 4.4:+15059864 MS.gene08994:CDS
TACTTTGGAGGTAGAGAGCT+CGG 0.513437 4.4:+15059763 MS.gene08994:CDS
TACTTTGGAGGTAGAGAGCT+CGG 0.513437 4.4:+15059991 MS.gene08994:CDS
ACTTTCTACCTCTAGGGTAA+TGG 0.513910 4.4:-15060215 None:intergenic
GGCAAAGATACAGGACAAAG+AGG 0.516423 4.4:+15059577 MS.gene08994:CDS
CACGAAGTCGCAACACAAGA+TGG 0.523122 4.4:-15059697 None:intergenic
TTTGGATGTTATAATCTGCA+AGG 0.527053 4.4:-15059433 None:intergenic
CTTGTCCTTCGTTTGAGGGG+AGG 0.529372 4.4:+15060157 MS.gene08994:CDS
AGCAGAGGTTGATCTTTGCT+GGG 0.529946 4.4:+15060299 MS.gene08994:CDS
AGATACCATAGACAATGTTA+AGG 0.537394 4.4:+15059328 MS.gene08994:CDS
TGCAGATTATAACATCCAAA+AGG 0.538373 4.4:+15059436 MS.gene08994:CDS
GCTCTCCACCTCAAGGGTGA+TGG 0.542893 4.4:-15059531 None:intergenic
ATATTTGTGAAGACATTGAC+CGG 0.544942 4.4:+15060187 MS.gene08994:CDS
CTGAATGTTATAATCAGCCA+AGG 0.545849 4.4:-15059660 None:intergenic
ATGAGACGCTGCTGGTCAGG+TGG 0.548364 4.4:-15059377 None:intergenic
TGTCAGAGCTCTCCACCTCA+AGG 0.548817 4.4:-15059538 None:intergenic
GGACAAGGAGGGCATTCCCC+CGG 0.552870 4.4:+15060045 MS.gene08994:CDS
ATGAGCCTCTGCTGATCTGG+TGG 0.553191 4.4:-15059605 None:intergenic
ATGAGCCTCTGCTGGTCTGG+AGG 0.556041 4.4:-15059833 None:intergenic
TTGGATGTTATAATCTGCAA+GGG 0.562824 4.4:-15059432 None:intergenic
CACCACGAAGACGCAATACA+AGG 0.565201 4.4:-15060384 None:intergenic
ACTTGAAGATGGCAGAACCT+TGG 0.569359 4.4:+15059643 MS.gene08994:CDS
GGAGACGGAGCACCAAATGA+AGG 0.570947 4.4:-15059466 None:intergenic
TCAAACGAAGGACAAGGTGG+AGG 0.573907 4.4:-15060150 None:intergenic
AGACACAATTGATAACGTAA+AGG 0.576461 4.4:+15060240 MS.gene08994:CDS
AATCAATCTTTGCTGGTCCG+GGG 0.576666 4.4:-15060062 None:intergenic
CCAAGATTCAAGACAAGGAA+GGG 0.576936 4.4:+15059351 MS.gene08994:CDS
GCTGGGAAGCAGTTAGAGGA+TGG 0.577214 4.4:+15060316 MS.gene08994:CDS
GGACACAATTGACAATGTAA+AGG 0.580955 4.4:+15059784 MS.gene08994:CDS
GGACACAATTGACAATGTAA+AGG 0.580955 4.4:+15060012 MS.gene08994:CDS
GGAAGCAGTTAGAGGATGGA+AGG 0.581888 4.4:+15060320 MS.gene08994:CDS
GTCAGAGCTCTCCACCTCAA+GGG 0.584759 4.4:-15059537 None:intergenic
GCCAAGATTCAAGACAAGGA+AGG 0.584836 4.4:+15059350 MS.gene08994:CDS
TGAGCCTCTGCTGGTCTGGA+GGG 0.585228 4.4:-15059832 None:intergenic
ATATTTGTGAAGACTCTCAC+AGG 0.586971 4.4:+15059503 MS.gene08994:CDS
TCTGAATGTTGTAGTCAGCA+AGG 0.587752 4.4:-15060345 None:intergenic
CTTGTATTGCGTCTTCGTGG+TGG 0.590595 4.4:+15060385 MS.gene08994:CDS
TTTGCATACCACCACGGAGA+CGG 0.590718 4.4:-15059481 None:intergenic
ATCAATCTTTGCTGGTCCGG+GGG 0.595024 4.4:-15060061 None:intergenic
CACCGCGTAGACGCAAAACA+AGG 0.597104 4.4:-15059928 None:intergenic
GCATACCTCCCCTCAAACGA+AGG 0.599519 4.4:-15060162 None:intergenic
TGAGACGCTGCTGGTCAGGT+GGG 0.600727 4.4:-15059376 None:intergenic
CTGAATGTTGTAGTCAGCAA+GGG 0.603128 4.4:-15060344 None:intergenic
AAAGACCATCACCCTTGAGG+TGG 0.607256 4.4:+15059526 MS.gene08994:CDS
TCAACCTCTGCTGATCTGGT+GGG 0.608097 4.4:-15060288 None:intergenic
AGTGATAGTCTTGCCAGTGA+GGG 0.619299 4.4:-15059288 None:intergenic
GGCTAAGATACAGGACAAGG+AGG 0.626054 4.4:+15059805 MS.gene08994:CDS
GCAAAGATACAGGACAAAGA+GGG 0.627998 4.4:+15059578 MS.gene08994:CDS
CAAATATTTGCATACCACCA+CGG 0.635399 4.4:-15059487 None:intergenic
GAGACGGAGCACCAAATGAA+GGG 0.636030 4.4:-15059465 None:intergenic
GAGTGATAGTCTTGCCAGTG+AGG 0.636937 4.4:-15059289 None:intergenic
CATTTGGTGCTCCGTCTCCG+TGG 0.643371 4.4:+15059470 MS.gene08994:CDS
GGCTAAGATACAGGACAAGG+AGG 0.643758 4.4:+15060033 MS.gene08994:CDS
TTGGTGCTCCGTCTCCGTGG+TGG 0.645961 4.4:+15059473 MS.gene08994:CDS
CAAACGAAGGACAAGGTGGA+GGG 0.650317 4.4:-15060149 None:intergenic
CTCCCCTCAAACGAAGGACA+AGG 0.650568 4.4:-15060156 None:intergenic
GCTAAGATACAGGACAAGGA+GGG 0.651009 4.4:+15060034 MS.gene08994:CDS
TAAGGCCAAGATTCAAGACA+AGG 0.652210 4.4:+15059346 MS.gene08994:CDS
TGACACCATTGACAATGTCA+AGG 0.652358 4.4:+15059556 MS.gene08994:CDS
CCCTCAAACGAAGGACAAGG+TGG 0.653409 4.4:-15060153 None:intergenic
GCTAAGATACAGGACAAGGA+GGG 0.656722 4.4:+15059806 MS.gene08994:CDS
AGGAAAGACCATCACCCTTG+AGG 0.657445 4.4:+15059523 MS.gene08994:CDS
GTATCCCTCCAGACCAGCAG+AGG 0.657865 4.4:+15059828 MS.gene08994:CDS
TGCTGACTACAACATTCAGA+AGG 0.660012 4.4:+15060348 MS.gene08994:CDS
GAATCCCACCAGATCAGCAG+AGG 0.663372 4.4:+15060284 MS.gene08994:CDS
TGAGCCTCTGCTGATCTGGT+GGG 0.668181 4.4:-15059604 None:intergenic
GTATCCCACCAGATCAGCAG+AGG 0.673596 4.4:+15059600 MS.gene08994:CDS
CGGAAAGACCATTACCCTAG+AGG 0.694589 4.4:+15060207 MS.gene08994:CDS
AAAGGCTAAGATACAGGACA+AGG 0.696274 4.4:+15059802 MS.gene08994:CDS
AAAGGCTAAGATACAGGACA+AGG 0.696274 4.4:+15060030 MS.gene08994:CDS
CTTGTGTTGCGACTTCGTGG+TGG 0.707503 4.4:+15059701 MS.gene08994:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AGATACCATAGACAATGTTA+AGG + chr4.4:15059328-15059347 MS.gene08994:CDS 30.0%
ATATTTGTGAAGACATTGAC+CGG + chr4.4:15060187-15060206 MS.gene08994:CDS 30.0%
TAACGTAAAGGCAAAAATAC+AGG + chr4.4:15060252-15060271 MS.gene08994:CDS 30.0%
TACCGGAAAAACAATTACTT+TGG + chr4.4:15059748-15059767 MS.gene08994:CDS 30.0%
TGCAGATTATAACATCCAAA+AGG + chr4.4:15059436-15059455 MS.gene08994:CDS 30.0%
TTGGATGTTATAATCTGCAA+GGG - chr4.4:15059435-15059454 None:intergenic 30.0%
TTTGGATGTTATAATCTGCA+AGG - chr4.4:15059436-15059455 None:intergenic 30.0%
! ATTTTTGTGAAGACTCTTAC+TGG + chr4.4:15059959-15059978 MS.gene08994:CDS 30.0%
!! AAGTAATTGTTTTTCCGGTA+AGG - chr4.4:15059748-15059767 None:intergenic 30.0%
!! AGACACAATTGATAACGTAA+AGG + chr4.4:15060240-15060259 MS.gene08994:CDS 30.0%
!! AGTAATTGTTTTTCCGGTAA+GGG - chr4.4:15059747-15059766 None:intergenic 30.0%
!! CTCCAAAGTAATTGTTTTTC+CGG - chr4.4:15059753-15059772 None:intergenic 30.0%
AAAATCAATCTTTGCTGGTC+CGG - chr4.4:15060067-15060086 None:intergenic 35.0%
AAAGGCAAAAATACAGGACA+AGG + chr4.4:15060258-15060277 MS.gene08994:CDS 35.0%
ATATTTGTGAAGACTCTCAC+AGG + chr4.4:15059503-15059522 MS.gene08994:CDS 35.0%
CAAATATTTGCATACCACCA+CGG - chr4.4:15059490-15059509 None:intergenic 35.0%
CAATGTAAAGGCTAAGATAC+AGG + chr4.4:15059796-15059815 MS.gene08994:CDS 35.0%
CAGCAAAAATCAATCTTTGC+TGG - chr4.4:15060072-15060091 None:intergenic 35.0%
CGGAAAAACAATTACTTTGG+AGG + chr4.4:15059751-15059770 MS.gene08994:CDS 35.0%
CTGAATGTTATAATCAGCCA+AGG - chr4.4:15059663-15059682 None:intergenic 35.0%
GGACACAATTGACAATGTAA+AGG + chr4.4:15059784-15059803 MS.gene08994:CDS 35.0%
TACTGGCAAGACAATTACTT+TGG + chr4.4:15059976-15059995 MS.gene08994:CDS 35.0%
TGTTATAATCAGCAAGAGTC+CGG - chr4.4:15060114-15060133 None:intergenic 35.0%
! ATTTTTGTGAAGACCCTTAC+CGG + chr4.4:15059731-15059750 MS.gene08994:CDS 35.0%
! ATTTTTGTTAAGACCCTCAC+TGG + chr4.4:15059275-15059294 MS.gene08994:CDS 35.0%
!! CAGCAAAGATTGATTTTTGC+TGG + chr4.4:15060070-15060089 MS.gene08994:CDS 35.0%
AAAGGAGTCTACCCTTCATT+TGG + chr4.4:15059454-15059473 MS.gene08994:CDS 40.0%
AAAGGCTAAGATACAGGACA+AGG + chr4.4:15059802-15059821 MS.gene08994:CDS 40.0%
AAATCAATCTTTGCTGGTCC+GGG - chr4.4:15060066-15060085 None:intergenic 40.0%
CAATGTCAAGGCAAAGATAC+AGG + chr4.4:15059568-15059587 MS.gene08994:CDS 40.0%
CCAAGATTCAAGACAAGGAA+GGG + chr4.4:15059351-15059370 MS.gene08994:CDS 40.0%
CTGAATGTTGTAGTCAGCAA+GGG - chr4.4:15060347-15060366 None:intergenic 40.0%
CTTTGCCTTGACATTGTCAA+TGG - chr4.4:15059564-15059583 None:intergenic 40.0%
GCAAAAATACAGGACAAGGA+GGG + chr4.4:15060262-15060281 MS.gene08994:CDS 40.0%
GCAAAGATACAGGACAAAGA+GGG + chr4.4:15059578-15059597 MS.gene08994:CDS 40.0%
GCTGGAAAACAACTTGAAGA+TGG + chr4.4:15059632-15059651 MS.gene08994:CDS 40.0%
GTCTGAACTTTCTACCTCTA+GGG - chr4.4:15060224-15060243 None:intergenic 40.0%
TAAGGCCAAGATTCAAGACA+AGG + chr4.4:15059346-15059365 MS.gene08994:CDS 40.0%
TCTGAATGTTGTAGTCAGCA+AGG - chr4.4:15060348-15060367 None:intergenic 40.0%
TGACACCATTGACAATGTCA+AGG + chr4.4:15059556-15059575 MS.gene08994:CDS 40.0%
TGGCAAGACAATTACTTTGG+AGG + chr4.4:15059979-15059998 MS.gene08994:CDS 40.0%
TGTCTGAACTTTCTACCTCT+AGG - chr4.4:15060225-15060244 None:intergenic 40.0%
! AATGAAGGGTAGACTCCTTT+TGG - chr4.4:15059454-15059473 None:intergenic 40.0%
! TGCTGACTACAACATTCAGA+AGG + chr4.4:15060348-15060367 MS.gene08994:CDS 40.0%
!! ACTTTCTACCTCTAGGGTAA+TGG - chr4.4:15060218-15060237 None:intergenic 40.0%
!! CTTGGCCTTAACATTGTCTA+TGG - chr4.4:15059336-15059355 None:intergenic 40.0%
AAGATCAACCTCTGCTGATC+TGG - chr4.4:15060295-15060314 None:intergenic 45.0%
AATCAATCTTTGCTGGTCCG+GGG - chr4.4:15060065-15060084 None:intergenic 45.0%
ACTTGAAGATGGCAGAACCT+TGG + chr4.4:15059643-15059662 MS.gene08994:CDS 45.0%
CCCTTCCTTGTCTTGAATCT+TGG - chr4.4:15059354-15059373 None:intergenic 45.0%
GCCAAGATTCAAGACAAGGA+AGG + chr4.4:15059350-15059369 MS.gene08994:CDS 45.0%
GCTAAGATACAGGACAAGGA+GGG + chr4.4:15059806-15059825 MS.gene08994:CDS 45.0%
GGCAAAAATACAGGACAAGG+AGG + chr4.4:15060261-15060280 MS.gene08994:CDS 45.0%
GGCAAAGATACAGGACAAAG+AGG + chr4.4:15059577-15059596 MS.gene08994:CDS 45.0%
! AGCAGAGGTTGATCTTTGCT+GGG + chr4.4:15060299-15060318 MS.gene08994:CDS 45.0%
! AGTGATAGTCTTGCCAGTGA+GGG - chr4.4:15059291-15059310 None:intergenic 45.0%
! GGTGAAGAGTTGACTCTTTC+TGG - chr4.4:15059910-15059929 None:intergenic 45.0%
! TACTTTGGAGGTAGAGAGCT+CGG + chr4.4:15059763-15059782 MS.gene08994:CDS 45.0%
!! CTCTAGGGTAATGGTCTTTC+CGG - chr4.4:15060209-15060228 None:intergenic 45.0%
AAAATGAGACGCTGCTGGTC+AGG - chr4.4:15059383-15059402 None:intergenic 50.0%
AAAATGAGCCTCTGCTGGTC+TGG - chr4.4:15059839-15059858 None:intergenic 50.0%
AAAGACCATCACCCTTGAGG+TGG + chr4.4:15059526-15059545 MS.gene08994:CDS 50.0%
AAGATGAGCCTCTGCTGATC+TGG - chr4.4:15059611-15059630 None:intergenic 50.0%
AGGAAAGACCATCACCCTTG+AGG + chr4.4:15059523-15059542 MS.gene08994:CDS 50.0%
ATCAACCTCTGCTGATCTGG+TGG - chr4.4:15060292-15060311 None:intergenic 50.0%
ATCAATCTTTGCTGGTCCGG+GGG - chr4.4:15060064-15060083 None:intergenic 50.0%
CAAACGAAGGACAAGGTGGA+GGG - chr4.4:15060152-15060171 None:intergenic 50.0%
CACCACGAAGACGCAATACA+AGG - chr4.4:15060387-15060406 None:intergenic 50.0%
CACCTTGTATTGCGTCTTCG+TGG + chr4.4:15060382-15060401 MS.gene08994:CDS 50.0%
CACCTTGTCCTTCGTTTGAG+GGG + chr4.4:15060154-15060173 MS.gene08994:CDS 50.0%
CACGAAGTCGCAACACAAGA+TGG - chr4.4:15059700-15059719 None:intergenic 50.0%
CAGCAAAAATGAGACGCTGC+TGG - chr4.4:15059388-15059407 None:intergenic 50.0%
CAGCAAAAATGAGCCTCTGC+TGG - chr4.4:15059844-15059863 None:intergenic 50.0%
CATCTTGTGTTGCGACTTCG+TGG + chr4.4:15059698-15059717 MS.gene08994:CDS 50.0%
CCACCTTGTCCTTCGTTTGA+GGG + chr4.4:15060153-15060172 MS.gene08994:CDS 50.0%
CGGAAAGACCATTACCCTAG+AGG + chr4.4:15060207-15060226 MS.gene08994:CDS 50.0%
CTTGTATTGCGTCTTCGTGG+TGG + chr4.4:15060385-15060404 MS.gene08994:CDS 50.0%
CTTTGCTGGGAAGCAGTTAG+AGG + chr4.4:15060312-15060331 MS.gene08994:CDS 50.0%
GGAAGCAGTTAGAGGATGGA+AGG + chr4.4:15060320-15060339 MS.gene08994:CDS 50.0%
GGCTAAGATACAGGACAAGG+AGG + chr4.4:15059805-15059824 MS.gene08994:CDS 50.0%
TCAAACGAAGGACAAGGTGG+AGG - chr4.4:15060153-15060172 None:intergenic 50.0%
TCAACCTCTGCTGATCTGGT+GGG - chr4.4:15060291-15060310 None:intergenic 50.0%
TCCACCTTGTCCTTCGTTTG+AGG + chr4.4:15060152-15060171 MS.gene08994:CDS 50.0%
TTTGCATACCACCACGGAGA+CGG - chr4.4:15059484-15059503 None:intergenic 50.0%
! CAGCAGAGGTTGATCTTTGC+TGG + chr4.4:15060298-15060317 MS.gene08994:CDS 50.0%
! CATTTTTGCTGGCAAGCAGC+TGG + chr4.4:15059397-15059416 MS.gene08994:CDS 50.0%
! GAGACGGAGCACCAAATGAA+GGG - chr4.4:15059468-15059487 None:intergenic 50.0%
! GAGTGATAGTCTTGCCAGTG+AGG - chr4.4:15059292-15059311 None:intergenic 50.0%
!! CAGCAGAGGCTCATTTTTGC+TGG + chr4.4:15059842-15059861 MS.gene08994:CDS 50.0%
!! CAGCAGCGTCTCATTTTTGC+TGG + chr4.4:15059386-15059405 MS.gene08994:CDS 50.0%
!!! CACCTTGTTTTGCGTCTACG+CGG + chr4.4:15059926-15059945 MS.gene08994:CDS 50.0%
ATGAGCCTCTGCTGATCTGG+TGG - chr4.4:15059608-15059627 None:intergenic 55.0%
CACCGCGTAGACGCAAAACA+AGG - chr4.4:15059931-15059950 None:intergenic 55.0%
CAGCAGAGGCTCATCTTTGC+TGG + chr4.4:15059614-15059633 MS.gene08994:CDS 55.0%
CCCTCAAACGAAGGACAAGG+TGG - chr4.4:15060156-15060175 None:intergenic 55.0%
CTCCCCTCAAACGAAGGACA+AGG - chr4.4:15060159-15060178 None:intergenic 55.0%
CTTGTCCTTCGTTTGAGGGG+AGG + chr4.4:15060157-15060176 MS.gene08994:CDS 55.0%
CTTGTGTTGCGACTTCGTGG+TGG + chr4.4:15059701-15059720 MS.gene08994:CDS 55.0%
GAAAGCAGCTCGAAGATGGC+AGG + chr4.4:15059864-15059883 MS.gene08994:CDS 55.0%
GAAAGCAGCTCGAAGATGGC+CGG + chr4.4:15059864-15059883 MS.gene08994:CDS 55.0%
GAATCCCACCAGATCAGCAG+AGG + chr4.4:15060284-15060303 MS.gene08994:CDS 55.0%
GCATACCTCCCCTCAAACGA+AGG - chr4.4:15060165-15060184 None:intergenic 55.0%
GCTGGAAAGCAGCTCGAAGA+TGG + chr4.4:15059860-15059879 MS.gene08994:CDS 55.0%
GCTGGGAAGCAGTTAGAGGA+TGG + chr4.4:15060316-15060335 MS.gene08994:CDS 55.0%
GTATCCCACCAGATCAGCAG+AGG + chr4.4:15059600-15059619 MS.gene08994:CDS 55.0%
GTCAGAGCTCTCCACCTCAA+GGG - chr4.4:15059540-15059559 None:intergenic 55.0%
TGAGCCTCTGCTGATCTGGT+GGG - chr4.4:15059607-15059626 None:intergenic 55.0%
TGTCAGAGCTCTCCACCTCA+AGG - chr4.4:15059541-15059560 None:intergenic 55.0%
! GGAGACGGAGCACCAAATGA+AGG - chr4.4:15059469-15059488 None:intergenic 55.0%
! TTTTGCTGGCAAGCAGCTGG+AGG + chr4.4:15059400-15059419 MS.gene08994:CDS 55.0%
!!! CTTGTTTTGCGTCTACGCGG+TGG + chr4.4:15059929-15059948 MS.gene08994:CDS 55.0%
ATGAGACGCTGCTGGTCAGG+TGG - chr4.4:15059380-15059399 None:intergenic 60.0%
CTGGCAAGCAGCTGGAGGAT+GGG + chr4.4:15059405-15059424 MS.gene08994:CDS 60.0%
GCTCTCCACCTCAAGGGTGA+TGG - chr4.4:15059534-15059553 None:intergenic 60.0%
GTATCCCTCCAGACCAGCAG+AGG + chr4.4:15059828-15059847 MS.gene08994:CDS 60.0%
TGAGACGCTGCTGGTCAGGT+GGG - chr4.4:15059379-15059398 None:intergenic 60.0%
! ATGAGCCTCTGCTGGTCTGG+AGG - chr4.4:15059836-15059855 None:intergenic 60.0%
! TGAGCCTCTGCTGGTCTGGA+GGG - chr4.4:15059835-15059854 None:intergenic 60.0%
!! CATTTGGTGCTCCGTCTCCG+TGG + chr4.4:15059470-15059489 MS.gene08994:CDS 60.0%
GCTGGCAAGCAGCTGGAGGA+TGG + chr4.4:15059404-15059423 MS.gene08994:CDS 65.0%
! TTGGTGCTCCGTCTCCGTGG+TGG + chr4.4:15059473-15059492 MS.gene08994:CDS 65.0%
!! GGACAAGGAGGGCATTCCCC+CGG + chr4.4:15060045-15060064 MS.gene08994:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 15059269 15060414 15059269 ID=MS.gene08994
chr4.4 mRNA 15059269 15060414 15059269 ID=MS.gene08994.t1;Parent=MS.gene08994
chr4.4 exon 15059269 15060414 15059269 ID=MS.gene08994.t1.exon1;Parent=MS.gene08994.t1
chr4.4 CDS 15059269 15060414 15059269 ID=cds.MS.gene08994.t1;Parent=MS.gene08994.t1
Gene Sequence

>MS.gene08994

ATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACTATCACTCTCGAAGTTGAGAGTTCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAGCAGCGTCTCATTTTTGCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCAGATTATAACATCCAAAAGGAGTCTACCCTTCATTTGGTGCTCCGTCTCCGTGGTGGTATGCAAATATTTGTGAAGACTCTCACAGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTGACACCATTGACAATGTCAAGGCAAAGATACAGGACAAAGAGGGTATCCCACCAGATCAGCAGAGGCTCATCTTTGCTGGAAAACAACTTGAAGATGGCAGAACCTTGGCTGATTATAACATTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCGACTTCGTGGTGGTATGCAGATTTTTGTGAAGACCCTTACCGGAAAAACAATTACTTTGGAGGTAGAGAGCTCGGACACAATTGACAATGTAAAGGCTAAGATACAGGACAAGGAGGGTATCCCTCCAGACCAGCAGAGGCTCATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACTCTTGCTGATTACAACATCCAGAAAGAGTCAACTCTTCACCTTGTTTTGCGTCTACGCGGTGGTATGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTTTGGAGGTAGAGAGCTCGGACACAATTGACAATGTAAAGGCTAAGATACAGGACAAGGAGGGCATTCCCCCGGACCAGCAAAGATTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGGACTCTTGCTGATTATAACATTCAGAAAGAGTCTACCCTCCACCTTGTCCTTCGTTTGAGGGGAGGTATGCAGATATTTGTGAAGACATTGACCGGAAAGACCATTACCCTAGAGGTAGAAAGTTCAGACACAATTGATAACGTAAAGGCAAAAATACAGGACAAGGAGGGAATCCCACCAGATCAGCAGAGGTTGATCTTTGCTGGGAAGCAGTTAGAGGATGGAAGGACCCTTGCTGACTACAACATTCAGAAGGAGTCTACACTTCACCTTGTATTGCGTCTTCGTGGTGGAAATTAA

Protein sequence

>MS.gene08994.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGN