AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98838

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98838.t1 MTR_6g084430 97.561 328 5 1 1 328 1 325 0.0 665
MS.gene98838.t1 MTR_3g435150 57.384 237 88 4 5 229 16 251 1.59e-88 268
MS.gene98838.t1 MTR_4g108760 66.332 199 54 4 4 198 16 205 1.68e-88 270
MS.gene98838.t1 MTR_3g109340 71.429 175 38 2 2 174 19 183 1.57e-86 264
MS.gene98838.t1 MTR_3g109340 71.023 176 38 3 2 174 19 184 9.40e-85 260
MS.gene98838.t1 MTR_1g008740 76.250 160 34 3 2 157 10 169 2.70e-83 256
MS.gene98838.t1 MTR_1g008740 76.250 160 34 3 2 157 24 183 3.82e-83 256
MS.gene98838.t1 MTR_2g078700 75.159 157 33 3 2 152 20 176 3.37e-82 254
MS.gene98838.t1 MTR_6g012670 70.701 157 42 1 5 157 20 176 4.14e-81 249
MS.gene98838.t1 MTR_7g085260 67.665 167 46 3 4 162 16 182 2.61e-77 241
MS.gene98838.t1 MTR_3g070030 52.137 234 102 4 5 231 19 249 7.60e-72 226
MS.gene98838.t1 MTR_6g032770 63.690 168 52 4 4 164 17 182 4.90e-70 223
MS.gene98838.t1 MTR_7g011130 63.473 167 44 2 8 157 22 188 1.15e-69 221
MS.gene98838.t1 MTR_2g064470 43.726 263 135 6 1 258 7 261 2.19e-68 216
MS.gene98838.t1 MTR_7g011120 63.924 158 46 2 5 151 8 165 1.14e-66 212
MS.gene98838.t1 MTR_3g116070 68.794 141 40 3 2 139 20 159 2.44e-64 207
MS.gene98838.t1 MTR_4g036030 50.262 191 89 2 5 192 7 194 3.64e-62 201
MS.gene98838.t1 MTR_4g101680 53.801 171 73 2 4 171 6 173 7.18e-61 199
MS.gene98838.t1 MTR_5g012080 54.070 172 69 4 4 170 6 172 6.79e-60 196
MS.gene98838.t1 MTR_2g080010 40.433 277 132 7 2 253 12 280 1.38e-59 195
MS.gene98838.t1 MTR_8g059170 57.595 158 63 2 4 157 13 170 1.87e-59 194
MS.gene98838.t1 MTR_7g085220 55.422 166 59 3 2 152 5 170 2.01e-59 194
MS.gene98838.t1 MTR_2g079990 56.051 157 67 1 4 158 15 171 2.24e-59 194
MS.gene98838.t1 MTR_4g081870 45.714 210 102 2 5 208 9 212 4.29e-59 191
MS.gene98838.t1 MTR_3g070040 48.052 231 106 5 9 231 12 236 7.79e-59 192
MS.gene98838.t1 MTR_5g021710 54.545 154 67 1 1 151 4 157 1.24e-58 192
MS.gene98838.t1 MTR_2g062730 40.244 246 123 3 2 243 7 232 1.46e-58 192
MS.gene98838.t1 MTR_2g064090 57.792 154 60 2 5 153 6 159 1.54e-58 192
MS.gene98838.t1 MTR_4g035590 60.000 150 56 2 5 151 8 156 1.61e-58 192
MS.gene98838.t1 MTR_2157s0010 55.556 162 58 2 5 152 8 169 4.22e-58 188
MS.gene98838.t1 MTR_4g089135 51.064 188 65 4 5 165 15 202 4.80e-58 191
MS.gene98838.t1 MTR_1g069805 56.291 151 62 2 4 152 9 157 9.93e-58 187
MS.gene98838.t1 MTR_3g088110 55.280 161 66 2 2 157 4 163 1.61e-57 187
MS.gene98838.t1 MTR_6g477900 48.500 200 93 5 4 197 5 200 4.29e-57 185
MS.gene98838.t1 MTR_8g076110 50.943 159 75 1 1 156 2 160 4.52e-57 187
MS.gene98838.t1 MTR_5g041940 53.165 158 68 1 5 156 3 160 5.87e-57 185
MS.gene98838.t1 MTR_1g096430 50.932 161 76 1 1 158 3 163 7.55e-57 187
MS.gene98838.t1 MTR_5g076850 58.553 152 59 2 5 152 6 157 1.53e-56 194
MS.gene98838.t1 MTR_7g100990 55.063 158 63 2 2 151 8 165 2.66e-56 186
MS.gene98838.t1 MTR_3g064580 58.170 153 59 2 5 152 6 158 5.32e-56 193
MS.gene98838.t1 MTR_7g097090 56.081 148 61 2 5 150 10 155 6.89e-56 183
MS.gene98838.t1 MTR_8g024480 51.220 164 66 2 2 151 12 175 7.09e-55 185
MS.gene98838.t1 MTR_8g094580 51.429 175 71 4 5 168 7 178 2.57e-54 179
MS.gene98838.t1 MTR_2g079990 47.568 185 67 2 4 158 15 199 8.75e-54 181
MS.gene98838.t1 MTR_3g096920 54.601 163 64 3 2 157 4 163 1.17e-53 178
MS.gene98838.t1 MTR_2g093810 52.500 160 68 2 5 156 14 173 3.43e-52 175
MS.gene98838.t1 MTR_7g005280 51.266 158 72 2 2 157 12 166 4.09e-51 170
MS.gene98838.t1 MTR_3g096920 57.047 149 59 2 2 148 4 149 5.40e-50 169
MS.gene98838.t1 MTR_0036s0150 54.194 155 67 3 7 157 7 161 5.05e-49 172
MS.gene98838.t1 MTR_6g011860 37.050 278 150 7 3 258 13 287 9.25e-49 168
MS.gene98838.t1 MTR_8g467490 45.882 170 79 3 1 157 10 179 9.59e-49 168
MS.gene98838.t1 MTR_5g014300 49.682 157 69 3 4 151 5 160 1.46e-48 166
MS.gene98838.t1 MTR_1g090723 53.205 156 68 3 7 157 10 165 1.67e-48 172
MS.gene98838.t1 MTR_5g040420 46.154 169 79 3 1 157 10 178 3.02e-48 166
MS.gene98838.t1 MTR_1g090723 52.258 155 70 3 7 157 10 164 4.71e-48 171
MS.gene98838.t1 MTR_1g090723 52.258 155 70 3 7 157 10 164 5.04e-48 170
MS.gene98838.t1 MTR_3g096140 51.678 149 68 2 7 151 9 157 8.87e-48 162
MS.gene98838.t1 MTR_3g093040 50.658 152 71 2 4 151 107 258 2.24e-47 162
MS.gene98838.t1 MTR_3g096140 51.678 149 68 2 7 151 9 157 5.10e-47 162
MS.gene98838.t1 MTR_5g069030 52.318 151 68 2 5 151 25 175 5.13e-47 168
MS.gene98838.t1 MTR_4g134460 49.333 150 69 2 7 152 56 202 5.86e-47 164
MS.gene98838.t1 MTR_3g093050 52.318 151 68 2 5 151 22 172 9.39e-47 166
MS.gene98838.t1 MTR_3g093050 52.318 151 68 2 5 151 22 172 1.24e-46 167
MS.gene98838.t1 MTR_4g098630 43.429 175 86 4 4 168 5 176 2.64e-45 157
MS.gene98838.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 3.99e-45 157
MS.gene98838.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 9.34e-45 158
MS.gene98838.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 9.94e-45 158
MS.gene98838.t1 MTR_1g090720 50.633 158 68 2 4 151 41 198 6.32e-44 157
MS.gene98838.t1 MTR_1g097300 48.667 150 73 2 7 152 21 170 3.60e-43 156
MS.gene98838.t1 MTR_2g086880 48.951 143 67 2 7 148 20 157 4.16e-43 155
MS.gene98838.t1 MTR_2g086880 48.951 143 67 2 7 148 20 157 4.86e-43 156
MS.gene98838.t1 MTR_8g093580 47.020 151 76 2 5 151 6 156 1.02e-42 154
MS.gene98838.t1 MTR_2g068880 36.170 235 125 6 2 216 18 247 2.60e-42 149
MS.gene98838.t1 MTR_4g075980 42.073 164 89 2 7 167 17 177 7.89e-42 147
MS.gene98838.t1 MTR_5g090970 41.860 172 82 3 2 157 15 184 1.24e-41 147
MS.gene98838.t1 MTR_2g068920 41.714 175 83 4 2 157 17 191 1.39e-41 146
MS.gene98838.t1 MTR_5g090970 41.860 172 81 4 2 157 15 183 5.91e-40 142
MS.gene98838.t1 MTR_8g099750 43.137 153 76 3 5 148 14 164 7.16e-39 137
MS.gene98838.t1 MTR_3g096140 48.889 135 65 2 21 151 2 136 1.64e-37 137
MS.gene98838.t1 MTR_3g098810 41.975 162 80 3 5 154 14 173 3.57e-37 133
MS.gene98838.t1 MTR_8g023840 46.667 150 71 5 4 148 10 155 4.94e-36 134
MS.gene98838.t1 MTR_3g098810 46.923 130 63 2 5 130 14 141 7.81e-35 125
MS.gene98838.t1 MTR_8g094580 52.381 126 46 4 54 168 2 124 1.34e-34 126
MS.gene98838.t1 MTR_4g052620 40.120 167 89 6 1 156 1 167 2.03e-33 124
MS.gene98838.t1 MTR_8g023860 44.371 151 75 6 3 148 10 156 4.88e-33 126
MS.gene98838.t1 MTR_8g023880 40.719 167 72 7 4 151 6 164 1.25e-31 119
MS.gene98838.t1 MTR_2g086690 39.103 156 83 6 6 149 5 160 2.71e-30 115
MS.gene98838.t1 MTR_7g105170 39.024 164 86 6 3 152 2 165 6.41e-30 115
MS.gene98838.t1 MTR_4g094302 33.854 192 106 4 5 186 11 191 7.15e-30 112
MS.gene98838.t1 MTR_8g023900 40.764 157 78 6 5 152 12 162 3.49e-28 114
MS.gene98838.t1 MTR_8g023900 37.267 161 87 6 1 151 184 340 7.88e-27 110
MS.gene98838.t1 MTR_8g023930 39.216 153 84 6 5 152 24 172 5.86e-28 113
MS.gene98838.t1 MTR_4g094302 41.406 128 65 2 5 130 11 130 2.35e-27 105
MS.gene98838.t1 MTR_8g093790 41.060 151 63 6 5 151 10 138 4.68e-25 100
MS.gene98838.t1 MTR_7g070140 51.899 79 36 1 58 134 17 95 1.11e-22 92.0
MS.gene98838.t1 MTR_3g096400 35.802 162 80 6 5 150 7 160 3.96e-19 84.7
MS.gene98838.t1 MTR_7g083360 33.846 130 80 5 2 128 7 133 3.02e-17 78.2
MS.gene98838.t1 MTR_2g014680 32.317 164 92 6 5 152 53 213 4.89e-15 75.1
MS.gene98838.t1 MTR_7g083330 28.758 153 103 5 5 154 18 167 4.92e-15 72.8
MS.gene98838.t1 MTR_7g083370 29.927 137 90 4 1 134 6 139 7.44e-15 71.2
MS.gene98838.t1 MTR_7g070150 48.485 66 32 2 101 165 8 72 7.74e-14 66.6
MS.gene98838.t1 MTR_5g053430 30.168 179 107 6 5 168 58 233 8.34e-14 72.0
MS.gene98838.t1 MTR_5g053430 30.168 179 107 6 5 168 58 233 8.75e-14 72.0
MS.gene98838.t1 MTR_1g093680 28.889 180 108 8 5 168 58 233 7.43e-13 69.3
MS.gene98838.t1 MTR_8g102240 30.270 185 95 8 5 164 47 222 8.04e-13 69.3
MS.gene98838.t1 MTR_8g102240 30.270 185 95 8 5 164 47 222 8.05e-13 69.3
MS.gene98838.t1 MTR_2g090735 33.793 145 75 5 4 130 48 189 3.57e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98838.t1 AT3G18400 58.407 339 105 12 1 328 1 314 1.57e-118 344
MS.gene98838.t1 AT5G61430 74.684 158 36 2 4 157 15 172 3.00e-84 258
MS.gene98838.t1 AT5G53950 76.923 156 30 3 3 152 15 170 3.58e-84 259
MS.gene98838.t1 AT2G24430 75.472 159 36 2 2 157 13 171 1.54e-83 255
MS.gene98838.t1 AT2G24430 75.472 159 36 2 2 157 13 171 1.54e-83 255
MS.gene98838.t1 AT5G07680 72.152 158 40 2 4 157 2 159 2.53e-82 252
MS.gene98838.t1 AT5G07680 72.152 158 40 2 4 157 16 173 3.62e-82 252
MS.gene98838.t1 AT5G39610 73.125 160 38 2 4 158 19 178 3.38e-81 248
MS.gene98838.t1 AT5G18270 72.549 153 37 2 4 151 20 172 7.46e-80 246
MS.gene98838.t1 AT5G18270 71.895 153 38 2 4 151 20 172 2.54e-79 245
MS.gene98838.t1 AT3G04060 71.895 153 38 2 4 151 19 171 2.79e-77 240
MS.gene98838.t1 AT1G76420 69.620 158 45 2 2 156 19 176 1.75e-76 238
MS.gene98838.t1 AT3G29035 71.523 151 39 1 4 150 23 173 1.69e-75 235
MS.gene98838.t1 AT3G15170 57.282 206 79 5 2 201 17 219 3.16e-73 229
MS.gene98838.t1 AT1G56010 59.236 157 58 2 1 151 15 171 1.14e-64 207
MS.gene98838.t1 AT3G12977 59.740 154 59 2 1 151 14 167 2.02e-64 205
MS.gene98838.t1 AT4G27410 42.797 236 122 4 4 237 13 237 4.45e-62 199
MS.gene98838.t1 AT1G71930 51.553 161 75 1 1 158 5 165 1.43e-60 197
MS.gene98838.t1 AT1G71930 51.553 161 75 1 1 158 5 165 1.43e-60 197
MS.gene98838.t1 AT3G04070 46.256 227 90 7 4 205 9 228 4.48e-60 196
MS.gene98838.t1 AT5G62380 56.129 155 65 1 4 155 6 160 1.74e-59 194
MS.gene98838.t1 AT5G62380 56.129 155 65 1 4 155 6 160 1.74e-59 194
MS.gene98838.t1 AT3G10500 58.861 158 61 2 4 157 8 165 1.93e-59 200
MS.gene98838.t1 AT1G33280 52.151 186 73 3 5 175 8 192 2.81e-59 192
MS.gene98838.t1 AT1G12260 54.194 155 68 1 4 155 6 160 1.09e-58 192
MS.gene98838.t1 AT3G04070 43.388 242 89 6 5 205 10 244 1.19e-58 193
MS.gene98838.t1 AT4G27410 40.316 253 121 5 4 237 13 254 1.23e-58 191
MS.gene98838.t1 AT1G12260 54.545 154 67 1 5 155 7 160 1.29e-58 194
MS.gene98838.t1 AT4G10350 59.211 152 57 2 5 151 9 160 2.08e-58 191
MS.gene98838.t1 AT3G15500 55.769 156 67 1 4 157 13 168 9.52e-58 189
MS.gene98838.t1 AT5G04410 58.170 153 60 2 4 152 8 160 9.68e-58 196
MS.gene98838.t1 AT3G03200 55.625 160 66 2 5 159 6 165 2.03e-57 193
MS.gene98838.t1 AT1G01720 45.022 231 95 6 5 206 7 234 2.63e-57 187
MS.gene98838.t1 AT1G52890 56.129 155 66 1 5 157 14 168 3.27e-57 188
MS.gene98838.t1 AT1G62700 54.545 154 67 1 5 155 7 160 3.90e-57 190
MS.gene98838.t1 AT1G62700 54.545 154 67 1 5 155 7 160 3.90e-57 190
MS.gene98838.t1 AT2G18060 54.305 151 66 1 4 151 8 158 4.97e-57 189
MS.gene98838.t1 AT2G18060 54.305 151 66 1 4 151 8 158 4.97e-57 189
MS.gene98838.t1 AT4G36160 50.932 161 76 1 4 161 9 169 1.50e-56 188
MS.gene98838.t1 AT4G36160 50.932 161 76 1 4 161 9 169 1.50e-56 188
MS.gene98838.t1 AT4G36160 50.932 161 76 1 4 161 13 173 1.86e-56 187
MS.gene98838.t1 AT5G17260 54.658 161 68 2 4 159 5 165 3.67e-56 189
MS.gene98838.t1 AT1G65910 54.375 160 69 2 5 160 6 165 4.13e-56 192
MS.gene98838.t1 AT3G17730 55.921 152 63 2 4 151 5 156 4.63e-56 182
MS.gene98838.t1 AT5G66300 52.469 162 71 3 4 159 11 172 9.40e-56 183
MS.gene98838.t1 AT5G61430 76.852 108 21 2 54 157 2 109 2.46e-55 181
MS.gene98838.t1 AT5G08790 46.119 219 90 7 2 203 4 211 2.48e-55 182
MS.gene98838.t1 AT1G69490 48.108 185 88 2 2 178 6 190 6.05e-55 180
MS.gene98838.t1 AT2G46770 50.595 168 65 4 2 151 13 180 1.43e-54 182
MS.gene98838.t1 AT1G61110 51.176 170 67 3 4 158 15 183 1.72e-54 181
MS.gene98838.t1 AT3G61910 49.405 168 67 2 2 151 8 175 1.94e-54 181
MS.gene98838.t1 AT4G28530 53.614 166 57 3 5 152 10 173 8.16e-54 180
MS.gene98838.t1 AT3G15510 52.761 163 62 3 9 156 21 183 5.81e-53 178
MS.gene98838.t1 AT1G33060 52.500 160 72 2 3 158 22 181 5.85e-53 184
MS.gene98838.t1 AT1G33060 52.500 160 72 2 3 158 22 181 6.48e-53 184
MS.gene98838.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.15e-52 177
MS.gene98838.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.15e-52 177
MS.gene98838.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.15e-52 177
MS.gene98838.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.15e-52 177
MS.gene98838.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.15e-52 177
MS.gene98838.t1 AT1G77450 52.532 158 69 2 5 157 10 166 1.29e-52 174
MS.gene98838.t1 AT5G63790 48.619 181 81 3 2 173 47 224 1.42e-52 176
MS.gene98838.t1 AT1G54330 53.846 156 69 2 4 157 5 159 1.44e-52 175
MS.gene98838.t1 AT5G63790 48.619 181 81 3 2 173 57 234 1.61e-52 176
MS.gene98838.t1 AT4G35580 45.755 212 96 7 3 200 7 213 2.92e-52 180
MS.gene98838.t1 AT4G35580 45.755 212 96 7 3 200 7 213 4.32e-52 180
MS.gene98838.t1 AT4G35580 45.755 212 96 7 3 200 7 213 4.91e-52 180
MS.gene98838.t1 AT2G33480 53.333 150 67 1 5 154 15 161 1.11e-51 172
MS.gene98838.t1 AT5G46590 52.941 153 66 3 5 151 6 158 1.42e-51 172
MS.gene98838.t1 AT1G32770 48.485 165 70 2 2 151 13 177 5.06e-51 173
MS.gene98838.t1 AT3G10490 52.941 153 67 2 4 151 26 178 1.33e-50 168
MS.gene98838.t1 AT2G33480 52.632 152 67 2 5 154 15 163 1.89e-50 169
MS.gene98838.t1 AT5G46590 57.364 129 52 2 5 130 6 134 5.98e-50 168
MS.gene98838.t1 AT3G10480 54.248 153 65 2 4 151 26 178 6.64e-50 172
MS.gene98838.t1 AT3G10490 52.941 153 67 2 4 151 26 178 1.05e-49 172
MS.gene98838.t1 AT5G13180 50.641 156 71 3 5 157 14 166 1.38e-49 166
MS.gene98838.t1 AT4G17980 52.258 155 66 4 5 151 6 160 2.85e-49 166
MS.gene98838.t1 AT4G17980 52.258 155 66 4 5 151 6 160 4.74e-49 166
MS.gene98838.t1 AT3G10480 54.248 153 64 3 4 151 26 177 1.20e-48 169
MS.gene98838.t1 AT1G52880 52.795 161 62 3 9 155 21 181 3.12e-47 162
MS.gene98838.t1 AT1G26870 43.979 191 90 5 1 174 12 202 6.97e-47 164
MS.gene98838.t1 AT5G39820 42.105 190 83 4 7 169 22 211 8.69e-47 161
MS.gene98838.t1 AT2G02450 49.315 146 73 1 7 151 53 198 1.13e-46 162
MS.gene98838.t1 AT2G02450 49.315 146 73 1 7 151 53 198 1.30e-46 163
MS.gene98838.t1 AT2G43000 45.161 155 82 1 7 158 20 174 2.90e-46 158
MS.gene98838.t1 AT5G64060 46.711 152 77 2 4 151 5 156 1.69e-45 158
MS.gene98838.t1 AT1G34180 46.452 155 79 2 7 157 18 172 4.99e-45 159
MS.gene98838.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.21e-45 159
MS.gene98838.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.21e-45 159
MS.gene98838.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.21e-45 159
MS.gene98838.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.21e-45 159
MS.gene98838.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.21e-45 159
MS.gene98838.t1 AT1G34190 46.452 155 79 2 7 157 18 172 1.66e-44 160
MS.gene98838.t1 AT1G56010 64.078 103 32 1 54 151 2 104 2.11e-44 153
MS.gene98838.t1 AT3G10480 44.624 186 65 2 4 151 26 211 2.55e-44 159
MS.gene98838.t1 AT1G34180 46.452 155 79 2 7 157 18 172 2.97e-44 159
MS.gene98838.t1 AT5G24590 39.604 202 114 4 4 197 12 213 4.08e-44 157
MS.gene98838.t1 AT3G49530 38.605 215 111 5 3 212 11 209 1.56e-43 154
MS.gene98838.t1 AT3G49530 38.605 215 111 5 3 212 11 209 5.19e-43 154
MS.gene98838.t1 AT1G34180 43.114 167 79 2 7 157 18 184 7.50e-43 154
MS.gene98838.t1 AT2G17040 39.572 187 100 4 7 183 8 191 1.07e-42 149
MS.gene98838.t1 AT1G34180 43.114 167 79 2 7 157 18 184 3.50e-42 154
MS.gene98838.t1 AT2G27300 48.276 145 69 2 5 148 14 153 4.24e-42 149
MS.gene98838.t1 AT1G32510 45.455 165 78 3 5 157 6 170 6.10e-42 147
MS.gene98838.t1 AT3G12977 64.356 101 33 2 54 151 14 114 1.56e-41 144
MS.gene98838.t1 AT1G32870 49.057 159 73 3 5 157 10 166 1.10e-39 146
MS.gene98838.t1 AT1G32870 49.057 159 73 3 5 157 10 166 1.20e-39 146
MS.gene98838.t1 AT1G32870 49.057 159 73 3 5 157 46 202 2.50e-39 146
MS.gene98838.t1 AT3G12910 41.765 170 79 5 7 157 23 191 3.35e-39 140
MS.gene98838.t1 AT3G44290 42.767 159 80 3 7 159 16 169 4.83e-39 138
MS.gene98838.t1 AT5G22290 32.432 259 145 6 7 239 23 277 5.13e-39 141
MS.gene98838.t1 AT3G44290 42.767 159 80 3 7 159 16 169 1.41e-38 140
MS.gene98838.t1 AT4G10350 61.000 100 37 1 54 151 14 113 2.89e-36 132
MS.gene98838.t1 AT5G04395 45.517 145 63 2 2 130 25 169 3.88e-36 129
MS.gene98838.t1 AT4G28530 50.781 128 45 2 5 114 10 137 3.49e-33 125
MS.gene98838.t1 AT2G33480 55.556 99 42 1 58 154 8 106 8.94e-31 115
MS.gene98838.t1 AT3G44350 37.576 165 94 5 1 156 1 165 9.20e-29 111
MS.gene98838.t1 AT1G02230 37.441 211 117 8 6 207 4 208 1.43e-28 113
MS.gene98838.t1 AT5G64530 34.884 172 82 4 4 157 2 161 3.57e-28 108
MS.gene98838.t1 AT3G04420 38.816 152 82 4 6 151 4 150 9.39e-28 110
MS.gene98838.t1 AT3G04420 38.816 152 82 4 6 151 4 150 3.62e-27 109
MS.gene98838.t1 AT4G01520 40.260 154 82 6 6 152 5 155 5.44e-27 108
MS.gene98838.t1 AT4G01540 36.612 183 103 7 8 183 7 183 3.09e-26 107
MS.gene98838.t1 AT5G64530 41.221 131 63 3 4 132 2 120 3.30e-26 102
MS.gene98838.t1 AT4G01540 40.789 152 80 6 8 152 7 155 4.09e-26 107
MS.gene98838.t1 AT4G01540 36.612 183 103 7 8 183 7 183 5.08e-26 107
MS.gene98838.t1 AT4G01540 40.789 152 80 6 8 152 7 155 5.42e-26 108
MS.gene98838.t1 AT3G44350 40.741 135 74 4 1 129 1 135 6.45e-26 101
MS.gene98838.t1 AT5G22380 36.527 167 95 5 1 156 1 167 7.23e-26 103
MS.gene98838.t1 AT3G10490 59.740 77 28 1 78 151 2 78 6.51e-24 100
MS.gene98838.t1 AT3G10490 59.740 77 28 1 78 151 2 78 6.51e-24 100
MS.gene98838.t1 AT4G01550 38.000 150 84 5 8 151 7 153 1.06e-23 101
MS.gene98838.t1 AT2G18060 56.522 69 30 0 83 151 2 70 3.15e-23 97.4
MS.gene98838.t1 AT1G02250 40.769 130 67 4 6 128 4 130 3.04e-22 96.3
MS.gene98838.t1 AT1G02220 40.157 127 69 3 6 128 4 127 3.58e-22 96.3
MS.gene98838.t1 AT1G01010 38.037 163 76 8 1 148 1 153 5.61e-22 96.3
MS.gene98838.t1 AT5G14000 34.161 161 101 3 4 162 14 171 3.48e-20 87.4
MS.gene98838.t1 AT2G43000 40.625 96 54 1 66 158 1 96 5.54e-20 86.7
MS.gene98838.t1 AT5G14000 36.434 129 78 2 4 130 14 140 2.19e-18 81.3
MS.gene98838.t1 AT3G56530 30.405 148 100 2 5 149 52 199 6.42e-18 83.6
MS.gene98838.t1 AT5G50820 36.090 133 69 5 4 130 16 138 2.84e-17 79.3
MS.gene98838.t1 AT5G22290 40.230 87 43 2 84 165 2 84 1.45e-15 75.5
MS.gene98838.t1 AT3G55210 30.357 168 97 7 5 156 11 174 5.93e-15 74.3
MS.gene98838.t1 AT4G28500 30.726 179 98 8 4 164 58 228 9.18e-14 71.2
MS.gene98838.t1 AT3G04430 35.878 131 70 5 11 128 6 135 2.05e-13 68.6
MS.gene98838.t1 AT5G14490 26.210 248 150 8 5 223 58 301 2.46e-13 70.5
MS.gene98838.t1 AT5G14490 26.210 248 150 8 5 223 55 298 2.54e-13 70.5
MS.gene98838.t1 AT5G14490 26.210 248 150 8 5 223 58 301 3.27e-13 70.1
MS.gene98838.t1 AT4G29230 31.892 185 93 8 5 164 47 223 3.78e-13 70.5
MS.gene98838.t1 AT1G25580 32.353 170 91 8 4 160 57 215 3.83e-13 70.1
MS.gene98838.t1 AT4G29230 31.892 185 93 8 5 164 48 224 3.85e-13 70.5
MS.gene98838.t1 AT4G29230 31.892 185 93 8 5 164 48 224 4.09e-13 70.1
MS.gene98838.t1 AT1G28470 31.148 183 97 8 4 167 76 248 4.64e-13 69.3
MS.gene98838.t1 AT5G14490 29.121 182 105 6 4 168 54 228 5.23e-13 68.6
MS.gene98838.t1 AT5G56620 31.073 177 90 7 4 152 42 214 2.06e-12 67.8
MS.gene98838.t1 AT5G56620 31.792 173 86 7 5 149 43 211 2.23e-12 67.8
MS.gene98838.t1 AT5G56620 29.500 200 109 7 4 175 42 237 2.74e-12 67.4

Find 67 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTACTGAAATATTATT+TGG 0.156112 6.1:+73940576 None:intergenic
ACAAGAGCAACCATTCAATT+TGG 0.264812 6.1:-73940358 MS.gene98838:CDS
ACCTCAATAGTGAATGAATT+TGG 0.270479 6.1:-73940792 MS.gene98838:CDS
ACCAATCGAGCCACTGAATC+AGG 0.295623 6.1:-73941852 MS.gene98838:CDS
CATTCAATTTGGACTCCATT+TGG 0.322744 6.1:-73940347 MS.gene98838:CDS
GTTGTGTCACATGGAGATTC+TGG 0.325153 6.1:+73940813 None:intergenic
GTTGAGCTTCCAAATCTAAA+TGG 0.329477 6.1:-73940765 MS.gene98838:CDS
CAAGGGGTGAGAAAAGTAAT+TGG 0.333069 6.1:-73941734 MS.gene98838:CDS
TGTGAACCTTGGGACCTTCC+AGG 0.334984 6.1:-73942809 MS.gene98838:intron
AGGATGAATGGGTGGTTTGT+AGG 0.337985 6.1:-73940890 MS.gene98838:CDS
ACATGAATTTGACAATGAAT+TGG 0.349230 6.1:-73940650 MS.gene98838:CDS
TTTGTAATACCATTTAGATT+TGG 0.362526 6.1:+73940756 None:intergenic
AATATTTCGTGGTGGAGTTT+TGG 0.365969 6.1:-73941799 MS.gene98838:CDS
TTTGGATTAAGCAAGTTAGA+AGG 0.390098 6.1:+73940594 None:intergenic
GGATGAATGGGTGGTTTGTA+GGG 0.397208 6.1:-73940889 MS.gene98838:CDS
ATCAACAACTGCAACAGCTT+TGG 0.405014 6.1:+73942841 None:intergenic
ACCAAATTCATTCACTATTG+AGG 0.421602 6.1:+73940791 None:intergenic
CCCTGATTCAGTGGCTCGAT+TGG 0.425214 6.1:+73941851 None:intergenic
TCATACAGGTAAGGCTTCAA+TGG 0.427731 6.1:-73941934 MS.gene98838:intron
TTCTAAAAGCATTACAACTT+AGG 0.444682 6.1:-73940548 MS.gene98838:CDS
ACTCCTTGTTGAGGCATGTA+TGG 0.449948 6.1:+73940477 None:intergenic
CTTTAAACAACTTCACCAAA+TGG 0.452085 6.1:+73940332 None:intergenic
CATACAGGTAAGGCTTCAAT+GGG 0.463734 6.1:-73941933 MS.gene98838:intron
GAGCCACTGAATCAGGGTAT+TGG 0.473159 6.1:-73941845 MS.gene98838:CDS
AGAGATAGAAAATATCCAAC+TGG 0.474047 6.1:-73941882 MS.gene98838:CDS
TACTTAGATCAGTTCCAAGT+TGG 0.477373 6.1:+73940442 None:intergenic
TTATAAGGGTAGGGCTCCAA+GGG 0.492314 6.1:-73941751 MS.gene98838:CDS
GTGATGAGTTCTTCATCTGT+TGG 0.493082 6.1:+73942905 None:intergenic
CAAATGGAGTCCAAATTGAA+TGG 0.497221 6.1:+73940348 None:intergenic
TCTCAACAAGTGTGAACCTT+GGG 0.498360 6.1:-73942819 MS.gene98838:CDS
GGATTCACCAACATTATTCA+AGG 0.498909 6.1:-73940717 MS.gene98838:CDS
CCCTACCCTTATAAAACACT+AGG 0.512291 6.1:+73941760 None:intergenic
AAGGGGTGAGAAAAGTAATT+GGG 0.515394 6.1:-73941733 MS.gene98838:CDS
GAAAACCACTGGAAAAGATA+AGG 0.516873 6.1:-73941823 MS.gene98838:CDS
TTTATAAGGGTAGGGCTCCA+AGG 0.519624 6.1:-73941752 MS.gene98838:CDS
GGTTGCTCTTGTTGATGCTG+TGG 0.527873 6.1:+73940369 None:intergenic
TCAGGGTATTGGAAAACCAC+TGG 0.536184 6.1:-73941834 MS.gene98838:CDS
ACTATTGAGGTTGTGTCACA+TGG 0.536553 6.1:+73940804 None:intergenic
TTTCCAATACCCTGATTCAG+TGG 0.541052 6.1:+73941842 None:intergenic
TGCAACAGCTTTGGATGTGA+AGG 0.542646 6.1:+73942850 None:intergenic
ATGGAGGAAAATCTACCTCC+TGG 0.544862 6.1:-73942941 MS.gene98838:CDS
AAAGATAAGGAAATATTTCG+TGG 0.545961 6.1:-73941810 MS.gene98838:CDS
TTAGAAGGCCATGGTAGAGA+TGG 0.548422 6.1:+73940609 None:intergenic
TGTTTGTCCTTGAATAATGT+TGG 0.550492 6.1:+73940710 None:intergenic
TTACCTTTGAAGTTCGAAAG+TGG 0.550555 6.1:+73941679 None:intergenic
TGGGAAAATGATGTTTGTTG+TGG 0.550859 6.1:+73940837 None:intergenic
ACACCACTTTCGAACTTCAA+AGG 0.552288 6.1:-73941682 MS.gene98838:intron
GTCACATGGAGATTCTGGTT+GGG 0.559177 6.1:+73940818 None:intergenic
GTAATATCTCATCACCAACT+TGG 0.564072 6.1:-73940456 MS.gene98838:CDS
CGATTGGTTCTAAGTCCAGT+TGG 0.570705 6.1:+73941867 None:intergenic
ATCTCAACAAGTGTGAACCT+TGG 0.575709 6.1:-73942820 MS.gene98838:CDS
GATGGAACATGACTTGAAGA+TGG 0.579781 6.1:+73940627 None:intergenic
AAATAACCTGGAAGGTCCCA+AGG 0.580335 6.1:+73942803 None:intergenic
TGTCACATGGAGATTCTGGT+TGG 0.585895 6.1:+73940817 None:intergenic
CCTACCCTTATAAAACACTA+GGG 0.590419 6.1:+73941761 None:intergenic
TTAAGCAAGTTAGAAGGCCA+TGG 0.601623 6.1:+73940600 None:intergenic
ACAAATTCATCATCTTCATG+TGG 0.605409 6.1:-73940738 MS.gene98838:CDS
CCAATCGAGCCACTGAATCA+GGG 0.616010 6.1:-73941851 MS.gene98838:CDS
TGAGATATTACTCCTTGTTG+AGG 0.618801 6.1:+73940468 None:intergenic
GCACCATACATGCCTCAACA+AGG 0.631430 6.1:-73940480 MS.gene98838:CDS
TACAGGTAAGGCTTCAATGG+GGG 0.647295 6.1:-73941931 MS.gene98838:intron
GTCATGTTCCATCTCTACCA+TGG 0.649805 6.1:-73940617 MS.gene98838:CDS
GATAAGGAAATATTTCGTGG+TGG 0.655075 6.1:-73941807 MS.gene98838:CDS
GTTGGATGAAACCTAAAACC+AGG 0.669523 6.1:+73942923 None:intergenic
TATAAGGGTAGGGCTCCAAG+GGG 0.710910 6.1:-73941750 MS.gene98838:CDS
GGATGAAACCTAAAACCAGG+AGG 0.726374 6.1:+73942926 None:intergenic
ATACAGGTAAGGCTTCAATG+GGG 0.739241 6.1:-73941932 MS.gene98838:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAGAACAAAAATAAAA+GGG + chr6.1:73940538-73940557 None:intergenic 10.0%
!! TATATAGAACAAAAATAAAA+GGG + chr6.1:73940568-73940587 None:intergenic 10.0%
!! TTAAATAGAACAAAAATAAA+AGG + chr6.1:73940539-73940558 None:intergenic 10.0%
!! TTTATATATAAGTTATTAAC+TGG + chr6.1:73940879-73940898 None:intergenic 10.0%
!!! TAAAATTTAATTTTTCTTTG+AGG - chr6.1:73940895-73940914 MS.gene98838:intron 10.0%
!!! TAGTAATCATATAATTTTTA+TGG + chr6.1:73941841-73941860 None:intergenic 10.0%
!!! TATACTATTAATTACTTTTT+TGG - chr6.1:73940769-73940788 MS.gene98838:CDS 10.0%
!! AAAATACTAGATTTCATATA+TGG - chr6.1:73942344-73942363 MS.gene98838:intron 15.0%
!! AAACTATTTACTTATTAACA+AGG + chr6.1:73942214-73942233 None:intergenic 15.0%
!! ACTAAGAAAATATTAAAACA+TGG + chr6.1:73941664-73941683 None:intergenic 15.0%
!! ATATAAACAAATTAAGAGAA+AGG + chr6.1:73940816-73940835 None:intergenic 15.0%
!! CACAAATTCAAAATATATTA+TGG - chr6.1:73941127-73941146 MS.gene98838:intron 15.0%
!! CTAAGAAAATATTAAAACAT+GGG + chr6.1:73941663-73941682 None:intergenic 15.0%
!! GAATTTACTGAAATATTATT+TGG + chr6.1:73942712-73942731 None:intergenic 15.0%
!! GTATATAGAACAAAAATAAA+AGG + chr6.1:73940569-73940588 None:intergenic 15.0%
!! TTGTAGAAATTATTATTAGA+AGG - chr6.1:73940666-73940685 MS.gene98838:CDS 15.0%
!!! ATTTTTATGGAAAGTTTTTA+AGG + chr6.1:73941828-73941847 None:intergenic 15.0%
!!! CAACTCTTTAAAAAAATTAA+TGG - chr6.1:73941155-73941174 MS.gene98838:intron 15.0%
!!! TATTTTGAAAATTAGTTACA+TGG + chr6.1:73941100-73941119 None:intergenic 15.0%
!!! TTAGTATAGTATTATTTTGT+TGG - chr6.1:73941725-73941744 MS.gene98838:CDS 15.0%
!! AATAATTAATCATGTTTGTG+TGG - chr6.1:73941320-73941339 MS.gene98838:intron 20.0%
!! TAACAAAAGTTGACATTAAT+TGG - chr6.1:73941191-73941210 MS.gene98838:intron 20.0%
!! TTTGTAATACCATTTAGATT+TGG + chr6.1:73942532-73942551 None:intergenic 20.0%
!!! AACTCATTTTAGTTTTTACA+AGG - chr6.1:73941691-73941710 MS.gene98838:CDS 20.0%
!!! AACTTTTGTATATATTGATC+TGG - chr6.1:73940929-73940948 MS.gene98838:intron 20.0%
!!! ACTTTTGTATATATTGATCT+GGG - chr6.1:73940930-73940949 MS.gene98838:intron 20.0%
!!! GAATATTTTGATTACTATGT+TGG - chr6.1:73942125-73942144 MS.gene98838:intron 20.0%
!!! GTTATTTTCAAAGTAAGAAT+GGG + chr6.1:73941068-73941087 None:intergenic 20.0%
!!! GTTTGATTATAGATTTTCAA+GGG - chr6.1:73940592-73940611 MS.gene98838:CDS 20.0%
!!! TGTTTGATTATAGATTTTCA+AGG - chr6.1:73940591-73940610 MS.gene98838:CDS 20.0%
!!! TTTGATTATAGATTTTCAAG+GGG - chr6.1:73940593-73940612 MS.gene98838:CDS 20.0%
! AAAAAAGTTACGAGACTTTA+TGG - chr6.1:73941954-73941973 MS.gene98838:intron 25.0%
! AAAGATAAGGAAATATTTCG+TGG - chr6.1:73941475-73941494 MS.gene98838:intron 25.0%
! ACATGAATTTGACAATGAAT+TGG - chr6.1:73942635-73942654 MS.gene98838:intron 25.0%
! AGATATGAACAAAAATAACC+TGG + chr6.1:73940497-73940516 None:intergenic 25.0%
! TCGACTAAACTTAATTTAGA+AGG - chr6.1:73940625-73940644 MS.gene98838:CDS 25.0%
!! AAAACCCTAGTGTTTTATAA+GGG - chr6.1:73941520-73941539 MS.gene98838:intron 25.0%
!! TAACATTTTGCAATTTTTGC+AGG - chr6.1:73942375-73942394 MS.gene98838:intron 25.0%
!! TTTTTGTTGATATGCTCTTT+TGG + chr6.1:73942426-73942445 None:intergenic 25.0%
!!! GGTTATTTTCAAAGTAAGAA+TGG + chr6.1:73941069-73941088 None:intergenic 25.0%
!!! GTATAGTATTATTTTGTTGG+TGG - chr6.1:73941728-73941747 MS.gene98838:CDS 25.0%
!!! TTAATAGTCGATTTTCTCTT+TGG - chr6.1:73942279-73942298 MS.gene98838:intron 25.0%
!!! TTATGGAAAGTTTTTAAGGA+TGG + chr6.1:73941824-73941843 None:intergenic 25.0%
!!! TTCTAAAAGCATTACAACTT+AGG - chr6.1:73942737-73942756 MS.gene98838:intron 25.0%
ACAAATTCATCATCTTCATG+TGG - chr6.1:73942547-73942566 MS.gene98838:intron 30.0%
ACCAAATTCATTCACTATTG+AGG + chr6.1:73942497-73942516 None:intergenic 30.0%
ACCAATAATCAACAAAGTCT+TGG - chr6.1:73940995-73941014 MS.gene98838:intron 30.0%
ACCTCAATAGTGAATGAATT+TGG - chr6.1:73942493-73942512 MS.gene98838:intron 30.0%
AGAGATAGAAAATATCCAAC+TGG - chr6.1:73941403-73941422 MS.gene98838:intron 30.0%
ATGAACAAAAATAACCTGGA+AGG + chr6.1:73940493-73940512 None:intergenic 30.0%
ATTAGTTACATGGTGTACTT+AGG + chr6.1:73941090-73941109 None:intergenic 30.0%
GTGTATAATTCATACAGGTA+AGG - chr6.1:73941342-73941361 MS.gene98838:intron 30.0%
TGTTTGTCCTTGAATAATGT+TGG + chr6.1:73942578-73942597 None:intergenic 30.0%
TTTGGATTAAGCAAGTTAGA+AGG + chr6.1:73942694-73942713 None:intergenic 30.0%
! ACCAAGACTTTGTTGATTAT+TGG + chr6.1:73940999-73941018 None:intergenic 30.0%
! GAAAACCCTAGTGTTTTATA+AGG - chr6.1:73941519-73941538 MS.gene98838:intron 30.0%
! TATTTCCTTATCTTTTCCAG+TGG + chr6.1:73941470-73941489 None:intergenic 30.0%
! TTGTCTTGCATTTTCGAAAA+CGG + chr6.1:73942251-73942270 None:intergenic 30.0%
!! AAGTTTTTAAGGATGGCTTA+TGG + chr6.1:73941817-73941836 None:intergenic 30.0%
!! TAGTATTATTTTGTTGGTGG+TGG - chr6.1:73941731-73941750 MS.gene98838:CDS 30.0%
AAGGGGTGAGAAAAGTAATT+GGG - chr6.1:73941552-73941571 MS.gene98838:intron 35.0%
ACAAGAGCAACCATTCAATT+TGG - chr6.1:73942927-73942946 MS.gene98838:CDS 35.0%
CAAATGGAGTCCAAATTGAA+TGG + chr6.1:73942940-73942959 None:intergenic 35.0%
CATTCAATTTGGACTCCATT+TGG - chr6.1:73942938-73942957 MS.gene98838:CDS 35.0%
CCTACCCTTATAAAACACTA+GGG + chr6.1:73941527-73941546 None:intergenic 35.0%
GAAAACCACTGGAAAAGATA+AGG - chr6.1:73941462-73941481 MS.gene98838:intron 35.0%
GATAAGGAAATATTTCGTGG+TGG - chr6.1:73941478-73941497 MS.gene98838:intron 35.0%
GGATTCACCAACATTATTCA+AGG - chr6.1:73942568-73942587 MS.gene98838:intron 35.0%
GTAATATCTCATCACCAACT+TGG - chr6.1:73942829-73942848 MS.gene98838:CDS 35.0%
GTGTGGTGTATAATTCATAC+AGG - chr6.1:73941337-73941356 MS.gene98838:intron 35.0%
GTTGAGCTTCCAAATCTAAA+TGG - chr6.1:73942520-73942539 MS.gene98838:intron 35.0%
TACTTAGATCAGTTCCAAGT+TGG + chr6.1:73942846-73942865 None:intergenic 35.0%
TGAGATATTACTCCTTGTTG+AGG + chr6.1:73942820-73942839 None:intergenic 35.0%
TTTAAGGATGGCTTATGGTT+GGG + chr6.1:73941812-73941831 None:intergenic 35.0%
! CCTAGTGTTTTATAAGGGTA+GGG - chr6.1:73941525-73941544 MS.gene98838:intron 35.0%
! GCAATTTTTGCAGGATGAAT+GGG - chr6.1:73942384-73942403 MS.gene98838:intron 35.0%
! TGCAATTTTTGCAGGATGAA+TGG - chr6.1:73942383-73942402 MS.gene98838:intron 35.0%
! TGGGAAAATGATGTTTGTTG+TGG + chr6.1:73942451-73942470 None:intergenic 35.0%
!! AAAATCTACCTCCTGGTTTT+AGG - chr6.1:73940351-73940370 MS.gene98838:CDS 35.0%
!! AATATTTCGTGGTGGAGTTT+TGG - chr6.1:73941486-73941505 MS.gene98838:intron 35.0%
!! TTACCTTTGAAGTTCGAAAG+TGG + chr6.1:73941609-73941628 None:intergenic 35.0%
!! TTTTAAGGATGGCTTATGGT+TGG + chr6.1:73941813-73941832 None:intergenic 35.0%
ACACCACTTTCGAACTTCAA+AGG - chr6.1:73941603-73941622 MS.gene98838:intron 40.0%
ACTATTGAGGTTGTGTCACA+TGG + chr6.1:73942484-73942503 None:intergenic 40.0%
ATACAGGTAAGGCTTCAATG+GGG - chr6.1:73941353-73941372 MS.gene98838:intron 40.0%
ATCAACAACTGCAACAGCTT+TGG + chr6.1:73940447-73940466 None:intergenic 40.0%
ATCACTAAATCAGACGCTAG+AGG - chr6.1:73942097-73942116 MS.gene98838:intron 40.0%
ATCTCAACAAGTGTGAACCT+TGG - chr6.1:73940465-73940484 MS.gene98838:CDS 40.0%
CAAGGGGTGAGAAAAGTAAT+TGG - chr6.1:73941551-73941570 MS.gene98838:intron 40.0%
CATACAGGTAAGGCTTCAAT+GGG - chr6.1:73941352-73941371 MS.gene98838:intron 40.0%
CCCTACCCTTATAAAACACT+AGG + chr6.1:73941528-73941547 None:intergenic 40.0%
GATGGAACATGACTTGAAGA+TGG + chr6.1:73942661-73942680 None:intergenic 40.0%
GTGATGAGTTCTTCATCTGT+TGG + chr6.1:73940383-73940402 None:intergenic 40.0%
GTTGGATGAAACCTAAAACC+AGG + chr6.1:73940365-73940384 None:intergenic 40.0%
TCATACAGGTAAGGCTTCAA+TGG - chr6.1:73941351-73941370 MS.gene98838:intron 40.0%
TCTCAACAAGTGTGAACCTT+GGG - chr6.1:73940466-73940485 MS.gene98838:CDS 40.0%
TTAAGCAAGTTAGAAGGCCA+TGG + chr6.1:73942688-73942707 None:intergenic 40.0%
TTTCCAATACCCTGATTCAG+TGG + chr6.1:73941446-73941465 None:intergenic 40.0%
! ATTTTTGCAGGATGAATGGG+TGG - chr6.1:73942387-73942406 MS.gene98838:intron 40.0%
! CCCTAGTGTTTTATAAGGGT+AGG - chr6.1:73941524-73941543 MS.gene98838:intron 40.0%
!! CAATTACTTTTCTCACCCCT+TGG + chr6.1:73941553-73941572 None:intergenic 40.0%
AAATAACCTGGAAGGTCCCA+AGG + chr6.1:73940485-73940504 None:intergenic 45.0%
ACTCCTTGTTGAGGCATGTA+TGG + chr6.1:73942811-73942830 None:intergenic 45.0%
ATGGAGGAAAATCTACCTCC+TGG - chr6.1:73940344-73940363 MS.gene98838:CDS 45.0%
GATGGCTTATGGTTGGGTAA+AGG + chr6.1:73941806-73941825 None:intergenic 45.0%
GGATGAAACCTAAAACCAGG+AGG + chr6.1:73940362-73940381 None:intergenic 45.0%
GTCATGTTCCATCTCTACCA+TGG - chr6.1:73942668-73942687 MS.gene98838:intron 45.0%
GTTGTGTCACATGGAGATTC+TGG + chr6.1:73942475-73942494 None:intergenic 45.0%
TACAGGTAAGGCTTCAATGG+GGG - chr6.1:73941354-73941373 MS.gene98838:intron 45.0%
TGTCACATGGAGATTCTGGT+TGG + chr6.1:73942471-73942490 None:intergenic 45.0%
TTAGAAGGCCATGGTAGAGA+TGG + chr6.1:73942679-73942698 None:intergenic 45.0%
TTATAAGGGTAGGGCTCCAA+GGG - chr6.1:73941534-73941553 MS.gene98838:intron 45.0%
TTTATAAGGGTAGGGCTCCA+AGG - chr6.1:73941533-73941552 MS.gene98838:intron 45.0%
! AGGATGAATGGGTGGTTTGT+AGG - chr6.1:73942395-73942414 MS.gene98838:intron 45.0%
! GGATGAATGGGTGGTTTGTA+GGG - chr6.1:73942396-73942415 MS.gene98838:intron 45.0%
! GTCACATGGAGATTCTGGTT+GGG + chr6.1:73942470-73942489 None:intergenic 45.0%
!! CGATTGGTTCTAAGTCCAGT+TGG + chr6.1:73941421-73941440 None:intergenic 45.0%
!! TCAGGGTATTGGAAAACCAC+TGG - chr6.1:73941451-73941470 MS.gene98838:intron 45.0%
!! TGCAACAGCTTTGGATGTGA+AGG + chr6.1:73940438-73940457 None:intergenic 45.0%
!! TTTCGTGGTGGAGTTTTGGT+AGG - chr6.1:73941490-73941509 MS.gene98838:intron 45.0%
!! AAAACTATAAAAATTAATTA+TGG + chr6.1:73941886-73941905 None:intergenic 5.0%
!!! TAACATATATTTTTTTTAAA+TGG - chr6.1:73942315-73942334 MS.gene98838:intron 5.0%
ACCAATCGAGCCACTGAATC+AGG - chr6.1:73941433-73941452 MS.gene98838:intron 50.0%
CCAATCGAGCCACTGAATCA+GGG - chr6.1:73941434-73941453 MS.gene98838:intron 50.0%
CTTCAATGGGGGAGAAGGAA+TGG - chr6.1:73941365-73941384 MS.gene98838:intron 50.0%
GAGCCACTGAATCAGGGTAT+TGG - chr6.1:73941440-73941459 MS.gene98838:intron 50.0%
GCACCATACATGCCTCAACA+AGG - chr6.1:73942805-73942824 MS.gene98838:intron 50.0%
GGTTGCTCTTGTTGATGCTG+TGG + chr6.1:73942919-73942938 None:intergenic 50.0%
TAAGGCTTCAATGGGGGAGA+AGG - chr6.1:73941360-73941379 MS.gene98838:intron 50.0%
TATAAGGGTAGGGCTCCAAG+GGG - chr6.1:73941535-73941554 MS.gene98838:intron 50.0%
CCCTGATTCAGTGGCTCGAT+TGG + chr6.1:73941437-73941456 None:intergenic 55.0%
TGTGAACCTTGGGACCTTCC+AGG - chr6.1:73940476-73940495 MS.gene98838:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 73940344 73942963 73940344 ID=MS.gene98838
chr6.1 mRNA 73940344 73942963 73940344 ID=MS.gene98838.t1;Parent=MS.gene98838
chr6.1 exon 73942810 73942963 73942810 ID=MS.gene98838.t1.exon1;Parent=MS.gene98838.t1
chr6.1 CDS 73942810 73942963 73942810 ID=cds.MS.gene98838.t1;Parent=MS.gene98838.t1
chr6.1 exon 73941683 73941948 73941683 ID=MS.gene98838.t1.exon2;Parent=MS.gene98838.t1
chr6.1 CDS 73941683 73941948 73941683 ID=cds.MS.gene98838.t1;Parent=MS.gene98838.t1
chr6.1 exon 73940344 73940910 73940344 ID=MS.gene98838.t1.exon3;Parent=MS.gene98838.t1
chr6.1 CDS 73940344 73940910 73940344 ID=cds.MS.gene98838.t1;Parent=MS.gene98838.t1
Gene Sequence

>MS.gene98838

ATGGAGGAAAATCTACCTCCTGGTTTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATCTTACAATGAAAATTTCTGATGCTTCCTTCACATCCAAAGCTGTTGCAGTTGTTGATCTCAACAAGTGTGAACCTTGGGACCTTCCAGGTTATTTTTGTTCATATCTCTCTTTCTTAAAAACTATCCCTTTTATTTTTGTTCTATTTAAAACTATCCCTTTTATTTTTGTTCTATATACTTTGTTTGATTATAGATTTTCAAGGGGTTTTAGTCTTCGACTAAACTTAATTTAGAAGGATTTTTTTTTTTTTTTTTTTGTAGAAATTATTATTAGAAGGATTGCAACTTGTTGATGAATATATGTGTTTATATAAACTAATTCAAAATTTGAAGATATTTAAAATAATAATAAATAAACTATACTATTAATTACTTTTTTGGTTAATTAAGAGTTAATAACATCCTTTCTCTTAATTTGTTTATATGATTATACAATTTTATATTTCACTAGCTTAAATTTCTTAACCAGTTAATAACTTATATATAAAATTTAATTTTTCTTTGAGGAAATAAAATTAAACTTTTGTATATATTGATCTGGGAGATGAAAATTGATCATTTATATCTCTTTTTTAGTTTTATAAACCAATAATCAACAAAGTCTTGGTTATTTTGCTTTTATGTCTCTTAATTCATTACTATATAGTAGCTTGACCCATTCTTACTTTGAAAATAACCTAAGTACACCATGTAACTAATTTTCAAAATATAACACACACAAATTCAAAATATATTATGGTATTTCAACTCTTTAAAAAAATTAATGGTTAGTTTGAATAGTAACAAAAGTTGACATTAATTGGTATAGCTACTAGCTGATTCGTTTGCTTATAAAAATAAAGTAACAAACTTGACATTAATTGATATAGCTACTAGATATTTTTTTATTTAGTGAACACAAAATCAATAAATAATTAATCATGTTTGTGTGGTGTATAATTCATACAGGTAAGGCTTCAATGGGGGAGAAGGAATGGTATTTTTTCAGTGTGAGAGATAGAAAATATCCAACTGGACTTAGAACCAATCGAGCCACTGAATCAGGGTATTGGAAAACCACTGGAAAAGATAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTGTTTTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTAGAAAACAAACACCACTTTCGAACTTCAAAGGTAAGTGCTCTACATTGCATTGCATTGCATTCATTCCCATGTTTTAATATTTTCTTAGTCACATAAAACTCATTTTAGTTTTTACAAGGACAAATGTTAATTAGTATAGTATTATTTTGTTGGTGGTGGATCATCAAACTAATCTCAACTTCTTTATCATTCAATCTACTTTTCAACTCCTTTACCCAACCATAAGCCATCCTTAAAAACTTTCCATAAAAATTATATGATTACTAATAATCATTTAATTTTAGTAGTCCATAATTAATTTTTATAGTTTTTTTGTACAATCAAAAGTGATATTTGTCAAGATAAAATAACAAATTGAGAAAAAAGTTACGAGACTTTATGGTTCGCTAACATTAACAACTAGTGATTTAAAAACATTTTTTACATTGATATCTACATCGATAAAAAACTCATTTAACATTCAATTTAACAATGATTTAGTGATTGAGTATTTGAAAATTCAATCACTAAATCAGACGCTAGAGGCACTAGAATATTTTGATTACTATGTTGGTCAATACATATCATTATTTTAAAAAAATACAAGATAATTGTTCATCTCAACAGTCTCTTTTCGCCTTGTTAATAAGTAAATAGTTTTTACAACATTTTCACCGTTTTCGAAAATGCAAGACAATCATTCATTTAATAGTCGATTTTCTCTTTGGTAACAAGTCAAATTAACATATATTTTTTTTAAATGGAAAGTGAAAATACTAGATTTCATATATGGTTGAGAATTAACATTTTGCAATTTTTGCAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCATATCAACAAAAAAACCACAACAAACATCATTTTCCCAACCAGAATCTCCATGTGACACAACCTCAATAGTGAATGAATTTGGTGATGTTGAGCTTCCAAATCTAAATGGTATTACAAATTCATCATCTTCATGTGGATTCACCAACATTATTCAAGGACAAACATTCAACACTCATGATGATCTCAATAATGTTAACACAAACATGAATTTGACAATGAATTGGCCATCTTCAAGTCATGTTCCATCTCTACCATGGCCTTCTAACTTGCTTAATCCAAATAATATTTCAGTAAATTCATTACTTCTAAAAGCATTACAACTTAGGAATTATCAACATCAAAGAGAAGTTGCAGCTACAAATACTCATTTTGCACCATACATGCCTCAACAAGGAGTAATATCTCATCACCAACTTGGAACTGATCTAAGTAATAATTCAAATGATCTAAGTGCTTCTTCTTCAAAAGTTTTAGAGTGTATGCCACAGCATCAACAAGAGCAACCATTCAATTTGGACTCCATTTGGTGA
Protein sequence

>MS.gene98838.t1

MEENLPPGFRFHPTDEELITHYLTMKISDASFTSKAVAVVDLNKCEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRTSKDEWVVCRVFQKSISTKKPQQTSFSQPESPCDTTSIVNEFGDVELPNLNGITNSSSSCGFTNIIQGQTFNTHDDLNNVNTNMNLTMNWPSSSHVPSLPWPSNLLNPNNISVNSLLLKALQLRNYQHQREVAATNTHFAPYMPQQGVISHHQLGTDLSNNSNDLSASSSKVLECMPQHQQEQPFNLDSIW