AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05457

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05457.t1 MTR_6g084430 96.951 328 7 1 1 328 1 325 0.0 662
MS.gene05457.t1 MTR_4g108760 66.834 199 53 4 4 198 16 205 3.57e-89 271
MS.gene05457.t1 MTR_3g435150 56.962 237 89 4 5 229 16 251 6.76e-88 266
MS.gene05457.t1 MTR_3g109340 70.857 175 39 2 2 174 19 183 7.46e-86 263
MS.gene05457.t1 MTR_3g109340 70.455 176 39 3 2 174 19 184 4.47e-84 258
MS.gene05457.t1 MTR_2g078700 75.796 157 32 3 2 152 20 176 1.07e-82 255
MS.gene05457.t1 MTR_1g008740 75.625 160 35 3 2 157 10 169 1.31e-82 254
MS.gene05457.t1 MTR_1g008740 75.625 160 35 3 2 157 24 183 1.85e-82 254
MS.gene05457.t1 MTR_6g012670 70.701 157 42 1 5 157 20 176 3.13e-81 249
MS.gene05457.t1 MTR_7g085260 67.665 167 46 3 4 162 16 182 2.39e-77 241
MS.gene05457.t1 MTR_3g070030 51.709 234 103 4 5 231 19 249 2.38e-71 225
MS.gene05457.t1 MTR_6g032770 63.690 168 52 4 4 164 17 182 5.76e-70 223
MS.gene05457.t1 MTR_7g011130 63.473 167 44 2 8 157 22 188 1.54e-69 221
MS.gene05457.t1 MTR_2g064470 43.726 263 135 6 1 258 7 261 2.19e-68 216
MS.gene05457.t1 MTR_7g011120 63.924 158 46 2 5 151 8 165 1.55e-66 211
MS.gene05457.t1 MTR_3g116070 69.504 141 39 3 2 139 20 159 4.23e-65 209
MS.gene05457.t1 MTR_4g036030 50.262 191 89 2 5 192 7 194 3.00e-62 202
MS.gene05457.t1 MTR_4g101680 53.801 171 73 2 4 171 6 173 7.74e-61 198
MS.gene05457.t1 MTR_7g085220 55.422 166 59 3 2 152 5 170 1.64e-59 194
MS.gene05457.t1 MTR_8g059170 57.595 158 63 2 4 157 13 170 2.08e-59 194
MS.gene05457.t1 MTR_5g012080 53.488 172 70 4 4 170 6 172 3.50e-59 194
MS.gene05457.t1 MTR_4g081870 45.714 210 102 2 5 208 9 212 4.63e-59 191
MS.gene05457.t1 MTR_2g080010 40.072 277 133 7 2 253 12 280 5.28e-59 193
MS.gene05457.t1 MTR_5g021710 54.545 154 67 1 1 151 4 157 1.09e-58 192
MS.gene05457.t1 MTR_2g079990 55.414 157 68 1 4 158 15 171 1.18e-58 192
MS.gene05457.t1 MTR_2g064090 57.792 154 60 2 5 153 6 159 1.51e-58 192
MS.gene05457.t1 MTR_2g062730 40.244 246 123 3 2 243 7 232 1.54e-58 192
MS.gene05457.t1 MTR_3g070040 47.619 231 107 5 9 231 12 236 2.38e-58 191
MS.gene05457.t1 MTR_4g035590 59.333 150 57 2 5 151 8 156 7.99e-58 190
MS.gene05457.t1 MTR_1g069805 56.291 151 62 2 4 152 9 157 9.01e-58 188
MS.gene05457.t1 MTR_3g088110 55.280 161 66 2 2 157 4 163 1.71e-57 187
MS.gene05457.t1 MTR_2157s0010 54.938 162 59 2 5 152 8 169 1.86e-57 187
MS.gene05457.t1 MTR_4g089135 48.936 188 69 3 5 165 15 202 1.95e-57 189
MS.gene05457.t1 MTR_8g076110 50.943 159 75 1 1 156 2 160 4.15e-57 187
MS.gene05457.t1 MTR_5g041940 53.165 158 68 1 5 156 3 160 6.20e-57 185
MS.gene05457.t1 MTR_1g096430 50.932 161 76 1 1 158 3 163 6.30e-57 187
MS.gene05457.t1 MTR_6g477900 48.500 200 93 5 4 197 5 200 6.68e-57 184
MS.gene05457.t1 MTR_7g100990 55.063 158 63 2 2 151 8 165 2.68e-56 186
MS.gene05457.t1 MTR_3g064580 58.170 153 59 2 5 152 6 158 4.42e-56 193
MS.gene05457.t1 MTR_7g097090 56.081 148 61 2 5 150 10 155 6.19e-56 184
MS.gene05457.t1 MTR_5g076850 57.895 152 60 2 5 152 6 157 6.43e-56 192
MS.gene05457.t1 MTR_8g024480 51.220 164 66 2 2 151 12 175 1.32e-54 184
MS.gene05457.t1 MTR_8g094580 51.429 175 71 4 5 168 7 178 2.57e-54 179
MS.gene05457.t1 MTR_3g096920 54.601 163 64 3 2 157 4 163 6.01e-54 178
MS.gene05457.t1 MTR_2g079990 47.568 185 67 2 4 158 15 199 9.83e-54 181
MS.gene05457.t1 MTR_2g093810 52.500 160 68 2 5 156 14 173 3.43e-52 175
MS.gene05457.t1 MTR_7g005280 51.266 158 72 2 2 157 12 166 3.59e-51 170
MS.gene05457.t1 MTR_3g096920 57.047 149 59 2 2 148 4 149 2.79e-50 170
MS.gene05457.t1 MTR_1g090723 53.205 156 68 3 7 157 10 165 5.18e-49 173
MS.gene05457.t1 MTR_5g014300 49.682 157 69 3 4 151 5 160 7.10e-49 167
MS.gene05457.t1 MTR_6g011860 37.050 278 150 7 3 258 13 287 9.85e-49 168
MS.gene05457.t1 MTR_1g090723 52.903 155 69 3 7 157 10 164 1.10e-48 172
MS.gene05457.t1 MTR_1g090723 52.903 155 69 3 7 157 10 164 1.15e-48 172
MS.gene05457.t1 MTR_0036s0150 53.548 155 68 3 7 157 7 161 1.73e-48 170
MS.gene05457.t1 MTR_8g467490 45.294 170 80 2 1 157 10 179 2.12e-48 167
MS.gene05457.t1 MTR_5g040420 45.562 169 80 3 1 157 10 178 4.90e-48 166
MS.gene05457.t1 MTR_3g096140 51.678 149 68 2 7 151 9 157 9.77e-48 162
MS.gene05457.t1 MTR_3g093040 50.658 152 71 2 4 151 107 258 1.19e-47 163
MS.gene05457.t1 MTR_5g069030 52.318 151 68 2 5 151 25 175 2.76e-47 169
MS.gene05457.t1 MTR_3g093050 52.318 151 68 2 5 151 22 172 5.14e-47 167
MS.gene05457.t1 MTR_3g096140 51.678 149 68 2 7 151 9 157 5.73e-47 162
MS.gene05457.t1 MTR_4g134460 49.333 150 69 2 7 152 56 202 6.04e-47 164
MS.gene05457.t1 MTR_3g093050 52.318 151 68 2 5 151 22 172 6.80e-47 167
MS.gene05457.t1 MTR_4g098630 42.857 175 87 4 4 168 5 176 1.90e-45 157
MS.gene05457.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 3.99e-45 157
MS.gene05457.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 9.34e-45 158
MS.gene05457.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 9.94e-45 158
MS.gene05457.t1 MTR_1g090720 50.633 158 68 2 4 151 41 198 6.52e-44 157
MS.gene05457.t1 MTR_1g097300 48.667 150 73 2 7 152 21 170 4.50e-43 156
MS.gene05457.t1 MTR_2g086880 48.951 143 67 2 7 148 20 157 4.61e-43 155
MS.gene05457.t1 MTR_2g086880 48.951 143 67 2 7 148 20 157 5.60e-43 156
MS.gene05457.t1 MTR_2g068880 36.170 235 125 6 2 216 18 247 2.46e-42 149
MS.gene05457.t1 MTR_8g093580 46.358 151 77 2 5 151 6 156 3.45e-42 152
MS.gene05457.t1 MTR_4g075980 42.073 164 89 2 7 167 17 177 8.68e-42 147
MS.gene05457.t1 MTR_2g068920 41.714 175 83 4 2 157 17 191 1.33e-41 146
MS.gene05457.t1 MTR_5g090970 42.353 170 84 3 2 157 15 184 2.46e-41 146
MS.gene05457.t1 MTR_5g090970 42.353 170 83 4 2 157 15 183 1.20e-39 142
MS.gene05457.t1 MTR_8g099750 43.137 153 76 3 5 148 14 164 1.43e-38 137
MS.gene05457.t1 MTR_3g096140 48.889 135 65 2 21 151 2 136 1.94e-37 137
MS.gene05457.t1 MTR_3g098810 41.975 162 80 3 5 154 14 173 5.68e-37 133
MS.gene05457.t1 MTR_8g023840 46.667 150 71 5 4 148 10 155 4.94e-36 134
MS.gene05457.t1 MTR_3g098810 46.923 130 63 2 5 130 14 141 8.50e-35 125
MS.gene05457.t1 MTR_8g094580 52.381 126 46 4 54 168 2 124 1.52e-34 126
MS.gene05457.t1 MTR_4g052620 40.120 167 89 6 1 156 1 167 3.31e-33 124
MS.gene05457.t1 MTR_8g023860 44.371 151 75 6 3 148 10 156 4.88e-33 126
MS.gene05457.t1 MTR_8g023880 40.719 167 72 7 4 151 6 164 1.25e-31 119
MS.gene05457.t1 MTR_7g105170 39.024 164 86 6 3 152 2 165 6.89e-30 114
MS.gene05457.t1 MTR_4g094302 33.333 192 107 4 5 186 11 191 7.00e-30 112
MS.gene05457.t1 MTR_2g086690 38.462 156 84 5 6 149 5 160 7.00e-30 114
MS.gene05457.t1 MTR_8g023930 39.216 153 84 6 5 152 24 172 6.99e-28 113
MS.gene05457.t1 MTR_8g023900 39.873 158 78 6 5 152 12 162 1.48e-27 112
MS.gene05457.t1 MTR_8g023900 37.805 164 82 7 1 151 184 340 7.65e-27 110
MS.gene05457.t1 MTR_4g094302 41.406 128 65 2 5 130 11 130 2.30e-27 105
MS.gene05457.t1 MTR_8g093790 41.060 151 63 6 5 151 10 138 4.63e-25 100
MS.gene05457.t1 MTR_7g070140 51.899 79 36 1 58 134 17 95 1.11e-22 92.0
MS.gene05457.t1 MTR_3g096400 35.802 162 80 6 5 150 7 160 3.24e-19 84.7
MS.gene05457.t1 MTR_7g083360 33.846 130 80 5 2 128 7 133 2.57e-17 78.2
MS.gene05457.t1 MTR_7g083330 28.758 153 103 5 5 154 18 167 4.82e-15 72.8
MS.gene05457.t1 MTR_2g014680 32.317 164 92 6 5 152 53 213 5.98e-15 74.7
MS.gene05457.t1 MTR_7g083370 29.927 137 90 4 1 134 6 139 7.51e-15 71.2
MS.gene05457.t1 MTR_7g070150 48.485 66 32 2 101 165 8 72 6.03e-14 67.0
MS.gene05457.t1 MTR_5g053430 30.168 179 107 6 5 168 58 233 6.57e-14 72.4
MS.gene05457.t1 MTR_5g053430 30.168 179 107 6 5 168 58 233 6.89e-14 72.4
MS.gene05457.t1 MTR_8g102240 30.270 185 95 8 5 164 47 222 7.82e-13 69.3
MS.gene05457.t1 MTR_8g102240 30.270 185 95 8 5 164 47 222 7.83e-13 69.3
MS.gene05457.t1 MTR_1g093680 28.889 180 108 8 5 168 58 233 1.57e-12 68.6
MS.gene05457.t1 MTR_2g090735 33.793 145 75 5 4 130 48 189 3.41e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05457.t1 AT3G18400 58.112 339 106 12 1 328 1 314 6.58e-118 343
MS.gene05457.t1 AT5G61430 74.684 158 36 2 4 157 15 172 3.00e-84 258
MS.gene05457.t1 AT5G53950 76.923 156 30 3 3 152 15 170 7.39e-84 258
MS.gene05457.t1 AT2G24430 74.843 159 37 2 2 157 13 171 7.92e-83 253
MS.gene05457.t1 AT2G24430 74.843 159 37 2 2 157 13 171 7.92e-83 253
MS.gene05457.t1 AT5G07680 71.519 158 41 2 4 157 2 159 1.21e-81 250
MS.gene05457.t1 AT5G07680 71.519 158 41 2 4 157 16 173 1.74e-81 250
MS.gene05457.t1 AT5G39610 73.125 160 38 2 4 158 19 178 3.38e-81 248
MS.gene05457.t1 AT5G18270 72.549 153 37 2 4 151 20 172 7.46e-80 246
MS.gene05457.t1 AT5G18270 71.895 153 38 2 4 151 20 172 2.54e-79 245
MS.gene05457.t1 AT3G04060 71.242 153 39 2 4 151 19 171 1.19e-76 238
MS.gene05457.t1 AT1G76420 68.987 158 46 2 2 156 19 176 1.72e-75 235
MS.gene05457.t1 AT3G29035 70.861 151 40 1 4 150 23 173 8.19e-75 233
MS.gene05457.t1 AT3G15170 57.282 206 79 5 2 201 17 219 3.16e-73 229
MS.gene05457.t1 AT1G56010 59.236 157 58 2 1 151 15 171 7.44e-65 207
MS.gene05457.t1 AT3G12977 59.740 154 59 2 1 151 14 167 3.15e-64 204
MS.gene05457.t1 AT4G27410 42.797 236 122 4 4 237 13 237 4.64e-62 199
MS.gene05457.t1 AT1G71930 51.553 161 75 1 1 158 5 165 1.35e-60 197
MS.gene05457.t1 AT1G71930 51.553 161 75 1 1 158 5 165 1.35e-60 197
MS.gene05457.t1 AT3G04070 46.256 227 90 7 4 205 9 228 4.48e-60 196
MS.gene05457.t1 AT5G62380 56.129 155 65 1 4 155 6 160 1.74e-59 194
MS.gene05457.t1 AT5G62380 56.129 155 65 1 4 155 6 160 1.74e-59 194
MS.gene05457.t1 AT1G33280 52.151 186 73 3 5 175 8 192 2.55e-59 193
MS.gene05457.t1 AT4G10350 59.868 152 56 2 5 151 9 160 4.79e-59 193
MS.gene05457.t1 AT1G12260 54.194 155 68 1 4 155 6 160 9.55e-59 192
MS.gene05457.t1 AT3G10500 58.228 158 62 2 4 157 8 165 9.80e-59 198
MS.gene05457.t1 AT1G12260 54.545 154 67 1 5 155 7 160 1.15e-58 194
MS.gene05457.t1 AT3G04070 43.388 242 89 6 5 205 10 244 1.19e-58 193
MS.gene05457.t1 AT4G27410 40.316 253 121 5 4 237 13 254 1.27e-58 191
MS.gene05457.t1 AT5G04410 58.170 153 60 2 4 152 8 160 2.46e-58 197
MS.gene05457.t1 AT3G03200 56.250 160 65 2 5 159 6 165 1.42e-57 193
MS.gene05457.t1 AT1G01720 45.022 231 95 6 5 206 7 234 2.58e-57 187
MS.gene05457.t1 AT1G62700 54.545 154 67 1 5 155 7 160 3.47e-57 190
MS.gene05457.t1 AT1G62700 54.545 154 67 1 5 155 7 160 3.47e-57 190
MS.gene05457.t1 AT2G18060 54.305 151 66 1 4 151 8 158 4.33e-57 189
MS.gene05457.t1 AT2G18060 54.305 151 66 1 4 151 8 158 4.33e-57 189
MS.gene05457.t1 AT3G15500 55.128 156 68 1 4 157 13 168 5.07e-57 187
MS.gene05457.t1 AT4G36160 50.932 161 76 1 4 161 9 169 1.32e-56 188
MS.gene05457.t1 AT4G36160 50.932 161 76 1 4 161 9 169 1.32e-56 188
MS.gene05457.t1 AT1G52890 55.484 155 67 1 5 157 14 168 1.60e-56 186
MS.gene05457.t1 AT4G36160 50.932 161 76 1 4 161 13 173 1.62e-56 188
MS.gene05457.t1 AT1G65910 54.375 160 69 2 5 160 6 165 3.76e-56 192
MS.gene05457.t1 AT5G17260 54.658 161 68 2 4 159 5 165 3.86e-56 189
MS.gene05457.t1 AT3G17730 55.921 152 63 2 4 151 5 156 4.02e-56 182
MS.gene05457.t1 AT5G66300 52.469 162 71 3 4 159 11 172 8.18e-56 183
MS.gene05457.t1 AT5G08790 46.119 219 90 7 2 203 4 211 2.73e-55 182
MS.gene05457.t1 AT2G46770 51.190 168 64 4 2 151 13 180 2.84e-55 184
MS.gene05457.t1 AT1G61110 51.765 170 66 3 4 158 15 183 3.93e-55 182
MS.gene05457.t1 AT5G61430 75.926 108 22 2 54 157 2 109 1.11e-54 180
MS.gene05457.t1 AT3G61910 49.405 168 67 2 2 151 8 175 1.73e-54 181
MS.gene05457.t1 AT1G69490 47.568 185 89 2 2 178 6 190 3.09e-54 179
MS.gene05457.t1 AT4G28530 53.614 166 57 3 5 152 10 173 1.76e-53 179
MS.gene05457.t1 AT1G77450 52.532 158 69 2 5 157 10 166 1.38e-52 174
MS.gene05457.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.41e-52 177
MS.gene05457.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.41e-52 177
MS.gene05457.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.41e-52 177
MS.gene05457.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.41e-52 177
MS.gene05457.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.41e-52 177
MS.gene05457.t1 AT1G54330 53.846 156 69 2 4 157 5 159 1.51e-52 175
MS.gene05457.t1 AT5G63790 48.619 181 81 3 2 173 47 224 1.54e-52 176
MS.gene05457.t1 AT5G63790 48.619 181 81 3 2 173 57 234 1.77e-52 176
MS.gene05457.t1 AT1G33060 51.875 160 73 2 3 158 22 181 2.06e-52 183
MS.gene05457.t1 AT3G15510 52.147 163 63 3 9 156 21 183 2.17e-52 177
MS.gene05457.t1 AT1G33060 51.875 160 73 2 3 158 22 181 2.26e-52 182
MS.gene05457.t1 AT4G35580 45.755 212 96 7 3 200 7 213 2.42e-52 180
MS.gene05457.t1 AT4G35580 45.755 212 96 7 3 200 7 213 3.55e-52 180
MS.gene05457.t1 AT4G35580 45.755 212 96 7 3 200 7 213 4.03e-52 180
MS.gene05457.t1 AT5G46590 52.941 153 66 3 5 151 6 158 6.93e-52 173
MS.gene05457.t1 AT2G33480 53.333 150 67 1 5 154 15 161 1.11e-51 172
MS.gene05457.t1 AT1G32770 48.485 165 70 2 2 151 13 177 5.11e-51 173
MS.gene05457.t1 AT2G33480 52.632 152 67 2 5 154 15 163 9.23e-51 169
MS.gene05457.t1 AT3G10490 52.941 153 67 2 4 151 26 178 1.40e-50 168
MS.gene05457.t1 AT5G46590 57.364 129 52 2 5 130 6 134 6.45e-50 168
MS.gene05457.t1 AT3G10480 54.248 153 65 2 4 151 26 178 7.22e-50 172
MS.gene05457.t1 AT3G10490 52.941 153 67 2 4 151 26 178 1.11e-49 172
MS.gene05457.t1 AT5G13180 50.641 156 71 3 5 157 14 166 1.38e-49 166
MS.gene05457.t1 AT4G17980 52.258 155 66 4 5 151 6 160 2.67e-49 166
MS.gene05457.t1 AT4G17980 52.258 155 66 4 5 151 6 160 4.45e-49 166
MS.gene05457.t1 AT3G10480 55.263 152 64 3 4 151 26 177 8.88e-49 169
MS.gene05457.t1 AT1G52880 52.147 163 60 3 9 155 21 181 4.12e-47 162
MS.gene05457.t1 AT1G26870 43.979 191 90 5 1 174 12 202 4.53e-47 164
MS.gene05457.t1 AT5G39820 42.105 190 83 4 7 169 22 211 8.97e-47 161
MS.gene05457.t1 AT2G02450 49.315 146 73 1 7 151 53 198 1.17e-46 162
MS.gene05457.t1 AT2G02450 49.315 146 73 1 7 151 53 198 1.34e-46 163
MS.gene05457.t1 AT2G43000 47.097 155 79 2 7 158 20 174 2.02e-46 159
MS.gene05457.t1 AT5G64060 46.711 152 77 2 4 151 5 156 1.72e-45 158
MS.gene05457.t1 AT1G34180 46.452 155 79 2 7 157 18 172 4.13e-45 159
MS.gene05457.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.46e-45 159
MS.gene05457.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.46e-45 159
MS.gene05457.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.46e-45 159
MS.gene05457.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.46e-45 159
MS.gene05457.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.46e-45 159
MS.gene05457.t1 AT1G34190 46.452 155 79 2 7 157 18 172 1.38e-44 160
MS.gene05457.t1 AT1G56010 64.078 103 32 1 54 151 2 104 2.09e-44 153
MS.gene05457.t1 AT1G34180 46.452 155 79 2 7 157 18 172 2.47e-44 159
MS.gene05457.t1 AT3G10480 44.624 186 65 2 4 151 26 211 2.74e-44 159
MS.gene05457.t1 AT5G24590 39.604 202 114 4 4 197 12 213 4.58e-44 157
MS.gene05457.t1 AT3G49530 38.140 215 112 5 3 212 11 209 2.45e-43 154
MS.gene05457.t1 AT1G34180 43.114 167 79 2 7 157 18 184 6.23e-43 154
MS.gene05457.t1 AT2G27300 48.966 145 68 2 5 148 14 153 7.78e-43 151
MS.gene05457.t1 AT3G49530 38.140 215 112 5 3 212 11 209 8.52e-43 154
MS.gene05457.t1 AT2G17040 39.572 187 100 4 7 183 8 191 1.12e-42 149
MS.gene05457.t1 AT1G34180 43.114 167 79 2 7 157 18 184 2.92e-42 154
MS.gene05457.t1 AT1G32510 45.455 165 78 3 5 157 6 170 2.97e-42 148
MS.gene05457.t1 AT3G12977 64.356 101 33 2 54 151 14 114 2.55e-41 144
MS.gene05457.t1 AT3G12910 42.353 170 78 5 7 157 23 191 6.02e-40 142
MS.gene05457.t1 AT1G32870 49.057 159 73 3 5 157 10 166 8.90e-40 147
MS.gene05457.t1 AT1G32870 49.057 159 73 3 5 157 10 166 9.79e-40 147
MS.gene05457.t1 AT1G32870 49.057 159 73 3 5 157 46 202 2.00e-39 146
MS.gene05457.t1 AT3G44290 42.767 159 80 3 7 159 16 169 4.58e-39 138
MS.gene05457.t1 AT5G22290 32.432 259 145 6 7 239 23 277 5.07e-39 141
MS.gene05457.t1 AT3G44290 42.767 159 80 3 7 159 16 169 1.34e-38 140
MS.gene05457.t1 AT4G10350 62.000 100 36 1 54 151 14 113 7.23e-37 134
MS.gene05457.t1 AT5G04395 43.827 162 68 3 2 147 25 179 2.88e-36 129
MS.gene05457.t1 AT4G28530 50.781 128 45 2 5 114 10 137 9.06e-33 124
MS.gene05457.t1 AT2G33480 55.556 99 42 1 58 154 8 106 4.07e-31 117
MS.gene05457.t1 AT1G02230 37.915 211 116 8 6 207 4 208 4.82e-29 115
MS.gene05457.t1 AT3G04420 39.474 152 81 4 6 151 4 150 1.74e-28 112
MS.gene05457.t1 AT5G64530 34.884 172 82 4 4 157 2 161 2.98e-28 108
MS.gene05457.t1 AT3G04420 39.474 152 81 4 6 151 4 150 6.78e-28 111
MS.gene05457.t1 AT3G44350 36.970 165 95 5 1 156 1 165 8.66e-28 108
MS.gene05457.t1 AT4G01520 40.909 154 81 6 6 152 5 155 2.30e-27 109
MS.gene05457.t1 AT4G01540 36.612 183 103 7 8 183 7 183 3.31e-26 107
MS.gene05457.t1 AT5G64530 41.221 131 63 3 4 132 2 120 3.44e-26 102
MS.gene05457.t1 AT4G01540 40.789 152 80 6 8 152 7 155 4.51e-26 107
MS.gene05457.t1 AT4G01540 36.612 183 103 7 8 183 7 183 5.39e-26 107
MS.gene05457.t1 AT4G01540 40.789 152 80 6 8 152 7 155 5.91e-26 107
MS.gene05457.t1 AT5G22380 36.527 167 95 5 1 156 1 167 6.66e-26 103
MS.gene05457.t1 AT3G44350 40.741 135 74 4 1 129 1 135 1.32e-25 100
MS.gene05457.t1 AT4G01550 38.667 150 83 5 8 151 7 153 4.67e-24 102
MS.gene05457.t1 AT3G10490 59.740 77 28 1 78 151 2 78 7.49e-24 100
MS.gene05457.t1 AT3G10490 59.740 77 28 1 78 151 2 78 7.49e-24 100
MS.gene05457.t1 AT2G18060 56.522 69 30 0 83 151 2 70 2.82e-23 97.4
MS.gene05457.t1 AT1G02250 41.538 130 66 4 6 128 4 130 7.86e-23 97.8
MS.gene05457.t1 AT1G02220 40.945 127 68 3 6 128 4 127 9.27e-23 98.2
MS.gene05457.t1 AT1G01010 37.805 164 75 8 1 148 1 153 1.53e-21 95.1
MS.gene05457.t1 AT2G43000 43.750 96 51 2 66 158 1 96 3.33e-20 87.4
MS.gene05457.t1 AT5G14000 34.161 161 101 3 4 162 14 171 3.34e-20 87.4
MS.gene05457.t1 AT5G14000 36.434 129 78 2 4 130 14 140 1.98e-18 81.3
MS.gene05457.t1 AT3G56530 30.405 148 100 2 5 149 52 199 1.19e-17 82.8
MS.gene05457.t1 AT5G50820 36.090 133 69 5 4 130 16 138 2.52e-17 79.3
MS.gene05457.t1 AT5G22290 40.230 87 43 2 84 165 2 84 1.69e-15 75.1
MS.gene05457.t1 AT3G55210 30.357 168 97 7 5 156 11 174 1.68e-14 73.2
MS.gene05457.t1 AT5G14490 26.210 248 150 8 5 223 58 301 1.38e-13 71.2
MS.gene05457.t1 AT5G14490 26.210 248 150 8 5 223 55 298 1.44e-13 70.9
MS.gene05457.t1 AT3G04430 35.878 131 70 5 11 128 6 135 1.56e-13 68.9
MS.gene05457.t1 AT5G14490 26.210 248 150 8 5 223 58 301 1.82e-13 70.9
MS.gene05457.t1 AT5G14490 29.121 182 105 6 4 168 54 228 2.87e-13 69.3
MS.gene05457.t1 AT4G29230 31.892 185 93 8 5 164 47 223 3.74e-13 70.5
MS.gene05457.t1 AT4G29230 31.892 185 93 8 5 164 48 224 3.78e-13 70.5
MS.gene05457.t1 AT1G25580 32.353 170 91 8 4 160 57 215 3.90e-13 70.1
MS.gene05457.t1 AT4G29230 31.892 185 93 8 5 164 48 224 4.01e-13 70.1
MS.gene05457.t1 AT1G28470 31.148 183 97 8 4 167 76 248 4.31e-13 69.3
MS.gene05457.t1 AT5G56620 31.073 177 90 7 4 152 42 214 2.45e-12 67.8
MS.gene05457.t1 AT5G56620 31.792 173 86 7 5 149 43 211 2.66e-12 67.8
MS.gene05457.t1 AT5G56620 29.500 200 109 7 4 175 42 237 3.27e-12 67.4

Find 67 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTACTGAAATATTATT+TGG 0.156112 6.4:+58276539 None:intergenic
ACAAGAGCAACCATTCAATT+TGG 0.264812 6.4:-58276321 MS.gene05457:CDS
ACCTCAATAGTGAATGAATT+TGG 0.270479 6.4:-58276755 MS.gene05457:CDS
ACCAATCGAGCCACTGAATC+AGG 0.295623 6.4:-58277800 MS.gene05457:CDS
CATTCAATTTGGACTCCATT+TGG 0.322744 6.4:-58276310 MS.gene05457:CDS
GTTGTGTCACATGGAGATTC+TGG 0.325153 6.4:+58276776 None:intergenic
GTTGAGCTTCCAAATCTAAA+TGG 0.329477 6.4:-58276728 MS.gene05457:CDS
CAAGGGGTGAGAAAAGTAAT+TGG 0.333069 6.4:-58277682 MS.gene05457:CDS
TGTGAACCTTGGGACCTTCC+AGG 0.334984 6.4:-58278812 MS.gene05457:intron
AGGATGAATGGGTGGTTTGT+AGG 0.337985 6.4:-58276853 MS.gene05457:CDS
ACATGAATTTGACAATGAAT+TGG 0.349230 6.4:-58276613 MS.gene05457:CDS
TTTGTAATACCATTTAGATT+TGG 0.362526 6.4:+58276719 None:intergenic
AATATTTCGTGGTGGAGTTT+TGG 0.365969 6.4:-58277747 MS.gene05457:CDS
TTTGGATTAAGCAAGTTAGA+AGG 0.390098 6.4:+58276557 None:intergenic
GGATGAATGGGTGGTTTGTA+GGG 0.397208 6.4:-58276852 MS.gene05457:CDS
ATCAACAACTGCAACAGCTT+TGG 0.405014 6.4:+58278844 None:intergenic
ACCAAATTCATTCACTATTG+AGG 0.421602 6.4:+58276754 None:intergenic
CCCTGATTCAGTGGCTCGAT+TGG 0.425214 6.4:+58277799 None:intergenic
TCATACAGGTAAGGCTTCAA+TGG 0.427731 6.4:-58277882 MS.gene05457:intron
TTCTAAAAGCATTACAACTT+AGG 0.444682 6.4:-58276511 MS.gene05457:CDS
ACTCCTTGTTGAGGCATGTA+TGG 0.449948 6.4:+58276440 None:intergenic
CTTTAAACAACTTCACCAAA+TGG 0.452085 6.4:+58276295 None:intergenic
CATACAGGTAAGGCTTCAAT+GGG 0.463734 6.4:-58277881 MS.gene05457:intron
GAGCCACTGAATCAGGGTAT+TGG 0.473159 6.4:-58277793 MS.gene05457:CDS
AGAGATAGAAAATATCCAAC+TGG 0.474047 6.4:-58277830 MS.gene05457:CDS
TACTTAGATCAGTTCCAAGT+TGG 0.477373 6.4:+58276405 None:intergenic
TTATAAGGGTAGGGCTCCAA+GGG 0.492314 6.4:-58277699 MS.gene05457:CDS
GTGATGAGTTCTTCATCTGT+TGG 0.493082 6.4:+58278908 None:intergenic
CAAATGGAGTCCAAATTGAA+TGG 0.497221 6.4:+58276311 None:intergenic
TCTCAACAAGTGTGAACCTT+GGG 0.498360 6.4:-58278822 MS.gene05457:CDS
GGATTCACCAACATTATTCA+AGG 0.498909 6.4:-58276680 MS.gene05457:CDS
CCCTACCCTTATAAAACACT+AGG 0.512291 6.4:+58277708 None:intergenic
AAGGGGTGAGAAAAGTAATT+GGG 0.515394 6.4:-58277681 MS.gene05457:CDS
GAAAACCACTGGAAAAGATA+AGG 0.516873 6.4:-58277771 MS.gene05457:CDS
TTTATAAGGGTAGGGCTCCA+AGG 0.519624 6.4:-58277700 MS.gene05457:CDS
ACACCACTTTCGAGCTTCAA+AGG 0.523029 6.4:-58277630 MS.gene05457:intron
GGTTGCTCTTGTTGATGCTG+TGG 0.527873 6.4:+58276332 None:intergenic
TCAGGGTATTGGAAAACCAC+TGG 0.536184 6.4:-58277782 MS.gene05457:CDS
ACTATTGAGGTTGTGTCACA+TGG 0.536553 6.4:+58276767 None:intergenic
TTTCCAATACCCTGATTCAG+TGG 0.541052 6.4:+58277790 None:intergenic
TGCAACAGCTTTGGATGTGA+AGG 0.542646 6.4:+58278853 None:intergenic
ATGGAGGAAAATCTACCTCC+TGG 0.544862 6.4:-58278944 MS.gene05457:CDS
AAAGATAAGGAAATATTTCG+TGG 0.545961 6.4:-58277758 MS.gene05457:CDS
TTAGAAGGCCATGGTAGAGA+TGG 0.548422 6.4:+58276572 None:intergenic
TGTTTGTCCTTGAATAATGT+TGG 0.550492 6.4:+58276673 None:intergenic
TGGGAAAATGATGTTTGTTG+TGG 0.550859 6.4:+58276800 None:intergenic
TTACCTTTGAAGCTCGAAAG+TGG 0.557754 6.4:+58277627 None:intergenic
GTCACATGGAGATTCTGGTT+GGG 0.559177 6.4:+58276781 None:intergenic
GTAATATCTCATCACCAACT+TGG 0.564072 6.4:-58276419 MS.gene05457:CDS
CGATTGGTTCTAAGTCCAGT+TGG 0.570705 6.4:+58277815 None:intergenic
ATCTCAACAAGTGTGAACCT+TGG 0.575709 6.4:-58278823 MS.gene05457:CDS
GATGGAACATGACTTGAAGA+TGG 0.579781 6.4:+58276590 None:intergenic
AAATAACCTGGAAGGTCCCA+AGG 0.580335 6.4:+58278806 None:intergenic
TGTCACATGGAGATTCTGGT+TGG 0.585895 6.4:+58276780 None:intergenic
CCTACCCTTATAAAACACTA+GGG 0.590419 6.4:+58277709 None:intergenic
TTAAGCAAGTTAGAAGGCCA+TGG 0.601623 6.4:+58276563 None:intergenic
ACAAATTCATCATCTTCATG+TGG 0.605409 6.4:-58276701 MS.gene05457:CDS
CCAATCGAGCCACTGAATCA+GGG 0.616010 6.4:-58277799 MS.gene05457:CDS
TGAGATATTACTCCTTGTTG+AGG 0.618801 6.4:+58276431 None:intergenic
GCACCATACATGCCTCAACA+AGG 0.631430 6.4:-58276443 MS.gene05457:CDS
TACAGGTAAGGCTTCAATGG+GGG 0.647295 6.4:-58277879 MS.gene05457:intron
GTCATGTTCCATCTCTACCA+TGG 0.649805 6.4:-58276580 MS.gene05457:CDS
GATAAGGAAATATTTCGTGG+TGG 0.655075 6.4:-58277755 MS.gene05457:CDS
GTTGGATGAAACCTAAAACC+AGG 0.669523 6.4:+58278926 None:intergenic
TATAAGGGTAGGGCTCCAAG+GGG 0.710910 6.4:-58277698 MS.gene05457:CDS
GGATGAAACCTAAAACCAGG+AGG 0.726374 6.4:+58278929 None:intergenic
ATACAGGTAAGGCTTCAATG+GGG 0.739241 6.4:-58277880 MS.gene05457:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGCAATTTTTTATTTTTTT+TGG - chr6.4:58276639-58276658 MS.gene05457:CDS 10.0%
!!! TAAAATTTTATTTTTCTTTG+AGG - chr6.4:58276913-58276932 MS.gene05457:intron 10.0%
!!! TAGTAATCATATAATTTTTA+TGG + chr6.4:58277845-58277864 None:intergenic 10.0%
!! AAAATACTAGATTTCATATA+TGG - chr6.4:58278347-58278366 MS.gene05457:intron 15.0%
!! AAACTATTTACTTATTAACA+AGG + chr6.4:58278218-58278237 None:intergenic 15.0%
!! ACTAAGAAAATATTAAAACA+TGG + chr6.4:58277668-58277687 None:intergenic 15.0%
!! CACAAATTCAAAATATATTA+TGG - chr6.4:58277145-58277164 MS.gene05457:intron 15.0%
!! CTAAGAAAATATTAAAACAT+GGG + chr6.4:58277667-58277686 None:intergenic 15.0%
!! GAATTTACTGAAATATTATT+TGG + chr6.4:58278715-58278734 None:intergenic 15.0%
!!! ATTTTTATGGAAAGTTTTTA+AGG + chr6.4:58277832-58277851 None:intergenic 15.0%
!!! CAACTCTTTAAAAAAATTAA+TGG - chr6.4:58277173-58277192 MS.gene05457:intron 15.0%
!!! TATTTTGAAAATTAGTTACA+TGG + chr6.4:58277118-58277137 None:intergenic 15.0%
!!! TTAGTATAGTATTATTTTGT+TGG - chr6.4:58277729-58277748 MS.gene05457:CDS 15.0%
!!! TTTTGGAAATTATTATTAGA+AGG - chr6.4:58276656-58276675 MS.gene05457:CDS 15.0%
!! AATAATTAATCATGTTTGTG+TGG - chr6.4:58277338-58277357 MS.gene05457:intron 20.0%
!! ATATAGACAAATTAAGAGAA+AGG + chr6.4:58276799-58276818 None:intergenic 20.0%
!! TAACAAAAGTTGACATTAAT+TGG - chr6.4:58277209-58277228 MS.gene05457:intron 20.0%
!! TTTGTAATACCATTTAGATT+TGG + chr6.4:58278535-58278554 None:intergenic 20.0%
!!! AACTCATTTTAGTTTTTACA+AGG - chr6.4:58277695-58277714 MS.gene05457:CDS 20.0%
!!! AGCTTTTGTATATATTGATT+TGG - chr6.4:58276947-58276966 MS.gene05457:intron 20.0%
!!! GAATATTTTGATTACTATGT+TGG - chr6.4:58278129-58278148 MS.gene05457:intron 20.0%
!!! GCTTTTGTATATATTGATTT+GGG - chr6.4:58276948-58276967 MS.gene05457:intron 20.0%
!!! GTTATTTTCAAAGTAAGAAT+GGG + chr6.4:58277086-58277105 None:intergenic 20.0%
! AAAAAAGTTACGAGACTTTA+TGG - chr6.4:58277958-58277977 MS.gene05457:intron 25.0%
! AAAGATAAGGAAATATTTCG+TGG - chr6.4:58277493-58277512 MS.gene05457:intron 25.0%
! ACATGAATTTGACAATGAAT+TGG - chr6.4:58278638-58278657 MS.gene05457:intron 25.0%
! AGATATGAACAAAAATAACC+TGG + chr6.4:58276460-58276479 None:intergenic 25.0%
! TCGACTAAACTTAATTTAGA+AGG - chr6.4:58276616-58276635 MS.gene05457:CDS 25.0%
!! AAAACCCTAGTGTTTTATAA+GGG - chr6.4:58277538-58277557 MS.gene05457:intron 25.0%
!! TAACATTTTGCAATTTTTGC+AGG - chr6.4:58278378-58278397 MS.gene05457:intron 25.0%
!! TGTTTGATTGTAGATTTTCA+AGG - chr6.4:58276582-58276601 MS.gene05457:CDS 25.0%
!! TTTTTGTTGATATGCTCTTT+TGG + chr6.4:58278429-58278448 None:intergenic 25.0%
!!! GGTTATTTTCAAAGTAAGAA+TGG + chr6.4:58277087-58277106 None:intergenic 25.0%
!!! GTATAGTATTATTTTGTTGG+TGG - chr6.4:58277732-58277751 MS.gene05457:CDS 25.0%
!!! TTAATAGTCGATTTTCTCTT+TGG - chr6.4:58278283-58278302 MS.gene05457:intron 25.0%
!!! TTATGGAAAGTTTTTAAGGA+TGG + chr6.4:58277828-58277847 None:intergenic 25.0%
!!! TTCTAAAAGCATTACAACTT+AGG - chr6.4:58278740-58278759 MS.gene05457:intron 25.0%
ACAAATTCATCATCTTCATG+TGG - chr6.4:58278550-58278569 MS.gene05457:intron 30.0%
ACCAAATTCATTCACTATTG+AGG + chr6.4:58278500-58278519 None:intergenic 30.0%
ACCAATAATCAACAAAGTCT+TGG - chr6.4:58277013-58277032 MS.gene05457:intron 30.0%
ACCTCAATAGTGAATGAATT+TGG - chr6.4:58278496-58278515 MS.gene05457:intron 30.0%
AGAGATAGAAAATATCCAAC+TGG - chr6.4:58277421-58277440 MS.gene05457:intron 30.0%
ATGAACAAAAATAACCTGGA+AGG + chr6.4:58276456-58276475 None:intergenic 30.0%
ATTAGTTACATGGTGTACTT+AGG + chr6.4:58277108-58277127 None:intergenic 30.0%
GTGTATAATTCATACAGGTA+AGG - chr6.4:58277360-58277379 MS.gene05457:intron 30.0%
TGTTTGTCCTTGAATAATGT+TGG + chr6.4:58278581-58278600 None:intergenic 30.0%
TTTGGATTAAGCAAGTTAGA+AGG + chr6.4:58278697-58278716 None:intergenic 30.0%
! ACCAAGACTTTGTTGATTAT+TGG + chr6.4:58277017-58277036 None:intergenic 30.0%
! GAAAACCCTAGTGTTTTATA+AGG - chr6.4:58277537-58277556 MS.gene05457:intron 30.0%
! TATTTCCTTATCTTTTCCAG+TGG + chr6.4:58277488-58277507 None:intergenic 30.0%
! TTGTCTTGCATTTTCGAAAA+CGG + chr6.4:58278255-58278274 None:intergenic 30.0%
!! AAGTTTTTAAGGATGGCTTA+TGG + chr6.4:58277821-58277840 None:intergenic 30.0%
!! TAGTATTATTTTGTTGGTGG+TGG - chr6.4:58277735-58277754 MS.gene05457:CDS 30.0%
AAGGGGTGAGAAAAGTAATT+GGG - chr6.4:58277570-58277589 MS.gene05457:intron 35.0%
ACAAGAGCAACCATTCAATT+TGG - chr6.4:58278930-58278949 MS.gene05457:CDS 35.0%
CAAATGGAGTCCAAATTGAA+TGG + chr6.4:58278943-58278962 None:intergenic 35.0%
CATTCAATTTGGACTCCATT+TGG - chr6.4:58278941-58278960 MS.gene05457:CDS 35.0%
CCTACCCTTATAAAACACTA+GGG + chr6.4:58277545-58277564 None:intergenic 35.0%
GAAAACCACTGGAAAAGATA+AGG - chr6.4:58277480-58277499 MS.gene05457:intron 35.0%
GATAAGGAAATATTTCGTGG+TGG - chr6.4:58277496-58277515 MS.gene05457:intron 35.0%
GGATTCACCAACATTATTCA+AGG - chr6.4:58278571-58278590 MS.gene05457:intron 35.0%
GTAATATCTCATCACCAACT+TGG - chr6.4:58278832-58278851 MS.gene05457:CDS 35.0%
GTGTGGTGTATAATTCATAC+AGG - chr6.4:58277355-58277374 MS.gene05457:intron 35.0%
GTTGAGCTTCCAAATCTAAA+TGG - chr6.4:58278523-58278542 MS.gene05457:intron 35.0%
TACTTAGATCAGTTCCAAGT+TGG + chr6.4:58278849-58278868 None:intergenic 35.0%
TGAGATATTACTCCTTGTTG+AGG + chr6.4:58278823-58278842 None:intergenic 35.0%
TTTAAGGATGGCTTATGGTT+GGG + chr6.4:58277816-58277835 None:intergenic 35.0%
! CCTAGTGTTTTATAAGGGTA+GGG - chr6.4:58277543-58277562 MS.gene05457:intron 35.0%
! GCAATTTTTGCAGGATGAAT+GGG - chr6.4:58278387-58278406 MS.gene05457:intron 35.0%
! TGCAATTTTTGCAGGATGAA+TGG - chr6.4:58278386-58278405 MS.gene05457:intron 35.0%
! TGGGAAAATGATGTTTGTTG+TGG + chr6.4:58278454-58278473 None:intergenic 35.0%
!! AAAATCTACCTCCTGGTTTT+AGG - chr6.4:58276314-58276333 MS.gene05457:CDS 35.0%
!! AATATTTCGTGGTGGAGTTT+TGG - chr6.4:58277504-58277523 MS.gene05457:intron 35.0%
!! TTTTAAGGATGGCTTATGGT+TGG + chr6.4:58277817-58277836 None:intergenic 35.0%
ACTATTGAGGTTGTGTCACA+TGG + chr6.4:58278487-58278506 None:intergenic 40.0%
ATACAGGTAAGGCTTCAATG+GGG - chr6.4:58277371-58277390 MS.gene05457:intron 40.0%
ATCAACAACTGCAACAGCTT+TGG + chr6.4:58276410-58276429 None:intergenic 40.0%
ATCACTAAATCAGACGCTAG+AGG - chr6.4:58278101-58278120 MS.gene05457:intron 40.0%
ATCTCAACAAGTGTGAACCT+TGG - chr6.4:58276428-58276447 MS.gene05457:CDS 40.0%
CAAGGGGTGAGAAAAGTAAT+TGG - chr6.4:58277569-58277588 MS.gene05457:intron 40.0%
CATACAGGTAAGGCTTCAAT+GGG - chr6.4:58277370-58277389 MS.gene05457:intron 40.0%
CCCTACCCTTATAAAACACT+AGG + chr6.4:58277546-58277565 None:intergenic 40.0%
GATGGAACATGACTTGAAGA+TGG + chr6.4:58278664-58278683 None:intergenic 40.0%
GTGATGAGTTCTTCATCTGT+TGG + chr6.4:58276346-58276365 None:intergenic 40.0%
GTTGGATGAAACCTAAAACC+AGG + chr6.4:58276328-58276347 None:intergenic 40.0%
TCATACAGGTAAGGCTTCAA+TGG - chr6.4:58277369-58277388 MS.gene05457:intron 40.0%
TCTCAACAAGTGTGAACCTT+GGG - chr6.4:58276429-58276448 MS.gene05457:CDS 40.0%
TTAAGCAAGTTAGAAGGCCA+TGG + chr6.4:58278691-58278710 None:intergenic 40.0%
TTTCCAATACCCTGATTCAG+TGG + chr6.4:58277464-58277483 None:intergenic 40.0%
! ATTTTTGCAGGATGAATGGG+TGG - chr6.4:58278390-58278409 MS.gene05457:intron 40.0%
! CCCTAGTGTTTTATAAGGGT+AGG - chr6.4:58277542-58277561 MS.gene05457:intron 40.0%
!! CAATTACTTTTCTCACCCCT+TGG + chr6.4:58277571-58277590 None:intergenic 40.0%
!! TTACCTTTGAAGCTCGAAAG+TGG + chr6.4:58277627-58277646 None:intergenic 40.0%
AAATAACCTGGAAGGTCCCA+AGG + chr6.4:58276448-58276467 None:intergenic 45.0%
ACACCACTTTCGAGCTTCAA+AGG - chr6.4:58277621-58277640 MS.gene05457:intron 45.0%
ACTCCTTGTTGAGGCATGTA+TGG + chr6.4:58278814-58278833 None:intergenic 45.0%
ATGGAGGAAAATCTACCTCC+TGG - chr6.4:58276307-58276326 MS.gene05457:CDS 45.0%
GATGGCTTATGGTTGGGTAA+AGG + chr6.4:58277810-58277829 None:intergenic 45.0%
GGATGAAACCTAAAACCAGG+AGG + chr6.4:58276325-58276344 None:intergenic 45.0%
GTCATGTTCCATCTCTACCA+TGG - chr6.4:58278671-58278690 MS.gene05457:intron 45.0%
GTTGTGTCACATGGAGATTC+TGG + chr6.4:58278478-58278497 None:intergenic 45.0%
TACAGGTAAGGCTTCAATGG+GGG - chr6.4:58277372-58277391 MS.gene05457:intron 45.0%
TGTCACATGGAGATTCTGGT+TGG + chr6.4:58278474-58278493 None:intergenic 45.0%
TTAGAAGGCCATGGTAGAGA+TGG + chr6.4:58278682-58278701 None:intergenic 45.0%
TTATAAGGGTAGGGCTCCAA+GGG - chr6.4:58277552-58277571 MS.gene05457:intron 45.0%
TTTATAAGGGTAGGGCTCCA+AGG - chr6.4:58277551-58277570 MS.gene05457:intron 45.0%
! AGGATGAATGGGTGGTTTGT+AGG - chr6.4:58278398-58278417 MS.gene05457:intron 45.0%
! GGATGAATGGGTGGTTTGTA+GGG - chr6.4:58278399-58278418 MS.gene05457:intron 45.0%
! GTCACATGGAGATTCTGGTT+GGG + chr6.4:58278473-58278492 None:intergenic 45.0%
!! CGATTGGTTCTAAGTCCAGT+TGG + chr6.4:58277439-58277458 None:intergenic 45.0%
!! TCAGGGTATTGGAAAACCAC+TGG - chr6.4:58277469-58277488 MS.gene05457:intron 45.0%
!! TGCAACAGCTTTGGATGTGA+AGG + chr6.4:58276401-58276420 None:intergenic 45.0%
!! TTTCGTGGTGGAGTTTTGGT+AGG - chr6.4:58277508-58277527 MS.gene05457:intron 45.0%
!! AAAACTATAAAAATTAATTA+TGG + chr6.4:58277890-58277909 None:intergenic 5.0%
!! ATATATATATAACAAAAAAA+AGG + chr6.4:58276502-58276521 None:intergenic 5.0%
!! TATATATATAACAAAAAAAA+GGG + chr6.4:58276501-58276520 None:intergenic 5.0%
!! TTTATATATAAGTTATTAAT+TGG + chr6.4:58276867-58276886 None:intergenic 5.0%
!!! ATATTATTAATTACTTTTTT+TGG - chr6.4:58276755-58276774 MS.gene05457:CDS 5.0%
!!! TATATATAAGTTTTTTTTTT+GGG + chr6.4:58276895-58276914 None:intergenic 5.0%
!!! TTAACATAATTTTTTTTAAA+TGG - chr6.4:58278318-58278337 MS.gene05457:intron 5.0%
!!! TTATATATAAGTTTTTTTTT+TGG + chr6.4:58276896-58276915 None:intergenic 5.0%
ACCAATCGAGCCACTGAATC+AGG - chr6.4:58277451-58277470 MS.gene05457:intron 50.0%
CCAATCGAGCCACTGAATCA+GGG - chr6.4:58277452-58277471 MS.gene05457:intron 50.0%
CTTCAATGGGGGAGAAGGAA+TGG - chr6.4:58277383-58277402 MS.gene05457:intron 50.0%
GAGCCACTGAATCAGGGTAT+TGG - chr6.4:58277458-58277477 MS.gene05457:intron 50.0%
GCACCATACATGCCTCAACA+AGG - chr6.4:58278808-58278827 MS.gene05457:intron 50.0%
GGTTGCTCTTGTTGATGCTG+TGG + chr6.4:58278922-58278941 None:intergenic 50.0%
TAAGGCTTCAATGGGGGAGA+AGG - chr6.4:58277378-58277397 MS.gene05457:intron 50.0%
TATAAGGGTAGGGCTCCAAG+GGG - chr6.4:58277553-58277572 MS.gene05457:intron 50.0%
CCCTGATTCAGTGGCTCGAT+TGG + chr6.4:58277455-58277474 None:intergenic 55.0%
TGTGAACCTTGGGACCTTCC+AGG - chr6.4:58276439-58276458 MS.gene05457:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 58276307 58278966 58276307 ID=MS.gene05457
chr6.4 mRNA 58276307 58278966 58276307 ID=MS.gene05457.t1;Parent=MS.gene05457
chr6.4 exon 58278813 58278966 58278813 ID=MS.gene05457.t1.exon1;Parent=MS.gene05457.t1
chr6.4 CDS 58278813 58278966 58278813 ID=cds.MS.gene05457.t1;Parent=MS.gene05457.t1
chr6.4 exon 58277631 58277896 58277631 ID=MS.gene05457.t1.exon2;Parent=MS.gene05457.t1
chr6.4 CDS 58277631 58277896 58277631 ID=cds.MS.gene05457.t1;Parent=MS.gene05457.t1
chr6.4 exon 58276307 58276873 58276307 ID=MS.gene05457.t1.exon3;Parent=MS.gene05457.t1
chr6.4 CDS 58276307 58276873 58276307 ID=cds.MS.gene05457.t1;Parent=MS.gene05457.t1
Gene Sequence

>MS.gene05457

ATGGAGGAAAATCTACCTCCTGGTTTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATCTTACAATGAAAATTTCTGATACTTCCTTCACATCCAAAGCTGTTGCAGTTGTTGATCTCAACAAGTGTGAACCTTGGGACCTTCCAGGTTATTTTTGTTCATATCTCTCTTTCTTAAAAACTATCCCTTTTTTTTGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGTTTGATTGTAGATTTTCAAGGAGTTTTAGTCTTCGACTAAACTTAATTTAGAAGGATGCAATTTTTTATTTTTTTTGGAAATTATTATTAGAAGGATTGCAACTTGTTGATGAATATATGTGTTTATATATAAACTAATTCAAGATTTGAAGAAGTTTTAAATAATAAACAATATTATTAATTACTTTTTTTGGTTAATTAAGAGTTAACATCCTTTCTCTTAATTTGTCTATATGATTATTCAATTCAATTTTATTTTTCACTAGCTTAAATTTCTTAACCAATTAATAACTTATATATAAAATTCTCCCAAAAAAAAAACTTATATATAAAATTTTATTTTTCTTTGAGGAAATAAAATTAAGCTTTTGTATATATTGATTTGGGAGATGAAAATTGATCATTTATATCTCTTTTTTAGTTTTATAAACCAATAATCAACAAAGTCTTGGTTATTTTGCTTTTATGTCTCTTAATTCATTACTATATAGTAGCTTGACCCATTCTTACTTTGAAAATAACCTAAGTACACCATGTAACTAATTTTCAAAATATAACACACACAAATTCAAAATATATTATGGTATTTCAACTCTTTAAAAAAATTAATGGTTAGTTTGAATAGTAACAAAAGTTGACATTAATTGGTATAGCTACTAGCTGATTCGTTTGCTTATAAAAATAAAGTAACAAAGTTGACATTAATTGATATAGCTACTAGATATTTTTTTATTTAGTGAACACAAAATCAATAAATAATTAATCATGTTTGTGTGGTGTATAATTCATACAGGTAAGGCTTCAATGGGGGAGAAGGAATGGTATTTTTTCAGTGTGAGAGATAGAAAATATCCAACTGGACTTAGAACCAATCGAGCCACTGAATCAGGGTATTGGAAAACCACTGGAAAAGATAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTGTTTTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTAGAAAACAAACACCACTTTCGAGCTTCAAAGGTAAGTGCATTGCATTTCATTCCCATGTTTTAATATTTTCTTAGTCACATAAAACTCATTTTAGTTTTTACAAGGACAAATGTTAATTAGTATAGTATTATTTTGTTGGTGGTGGATCATCAAACTAATCTCAACTTCTTTATCATTCAATCTACTTTTCAACTCCTTTACCCAACCATAAGCCATCCTTAAAAACTTTCCATAAAAATTATATGATTACTAATAATCATTTAATTTTAGTAGTCCATAATTAATTTTTATAGTTTTTTTGTACAATCAAAAGTGATATTTGTCAAGATAAAATAACAAATTGAGAAAAAAGTTACGAGACTTTATGGTTCGCTAACATTAACAACTAGTGATTTAAAAACATTTTTTACATTGATATCTACATCTATAAAAAACTCATTTAACATTCAATTTAACAATGATTTAGTGATTGAGTATTTGAAAATTCAATCACTAAATCAGACGCTAGAGGCACTAGAATATTTTGATTACTATGTTGGTCAATACATATCATTATTTTAAAAAAATACAAGATAATTGTTCATCTCAACAGTCTCTTTTCGCCTTGTTAATAAGTAAATAGTTTTTACAACATTTTCACCGTTTTCGAAAATGCAAGACAATCATTCATTTAATAGTCGATTTTCTCTTTGGTAACAAGTCAAATTAACATAATTTTTTTTAAATGGAAAGTGAAAATACTAGATTTCATATATGGTTGAGAATTAACATTTTGCAATTTTTGCAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCATATCAACAAAAAAACCACAACAAACATCATTTTCCCAACCAGAATCTCCATGTGACACAACCTCAATAGTGAATGAATTTGGTGATGTTGAGCTTCCAAATCTAAATGGTATTACAAATTCATCATCTTCATGTGGATTCACCAACATTATTCAAGGACAAACATTCAACACTCATGATGATCTCAATAATGTTAACACAAACATGAATTTGACAATGAATTGGCCATCTTCAAGTCATGTTCCATCTCTACCATGGCCTTCTAACTTGCTTAATCCAAATAATATTTCAGTAAATTCATTACTTCTAAAAGCATTACAACTTAGGAATTATCAACATCAAAGAGAAGTTGCAGCTACAAATACTCATTTTGCACCATACATGCCTCAACAAGGAGTAATATCTCATCACCAACTTGGAACTGATCTAAGTAATAATTCAAATGATCTAAGTGCTTCTTCTTCAAAAGTTTTAGAGTGTATGCCACAGCATCAACAAGAGCAACCATTCAATTTGGACTCCATTTGGTGA
Protein sequence

>MS.gene05457.t1

MEENLPPGFRFHPTDEELITHYLTMKISDTSFTSKAVAVVDLNKCEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRASKDEWVVCRVFQKSISTKKPQQTSFSQPESPCDTTSIVNEFGDVELPNLNGITNSSSSCGFTNIIQGQTFNTHDDLNNVNTNMNLTMNWPSSSHVPSLPWPSNLLNPNNISVNSLLLKALQLRNYQHQREVAATNTHFAPYMPQQGVISHHQLGTDLSNNSNDLSASSSKVLECMPQHQQEQPFNLDSIW