Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98967.t1 | XP_013466545.1 | 95.3 | 653 | 28 | 1 | 1 | 653 | 1 | 650 | 0.00E+00 | 1309.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98967.t1 | Q39J78 | 32.7 | 104 | 65 | 1 | 416 | 519 | 209 | 307 | 1.4e-07 | 59.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98967.t1 | G8A036 | 95.3 | 653 | 28 | 1 | 1 | 653 | 1 | 650 | 0.0e+00 | 1309.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054435 | MS.gene98967 | 0.800086 | 1.70E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98967.t1 | MTR_1g032340 | 95.253 | 653 | 28 | 1 | 1 | 653 | 1 | 650 | 0.0 | 1246 |
| MS.gene98967.t1 | MTR_1g032010 | 95.253 | 653 | 28 | 1 | 1 | 653 | 1 | 650 | 0.0 | 1246 |
| MS.gene98967.t1 | MTR_1g032300 | 75.684 | 658 | 147 | 7 | 1 | 650 | 1 | 653 | 0.0 | 991 |
| MS.gene98967.t1 | MTR_3g088425 | 45.077 | 650 | 296 | 20 | 5 | 625 | 31 | 648 | 4.82e-164 | 486 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98967.t1 | AT4G01870 | 61.027 | 662 | 239 | 11 | 1 | 653 | 50 | 701 | 0.0 | 815 |
| MS.gene98967.t1 | AT4G01870 | 61.027 | 662 | 239 | 11 | 1 | 653 | 1 | 652 | 0.0 | 812 |
| MS.gene98967.t1 | AT1G21680 | 41.882 | 659 | 314 | 15 | 7 | 619 | 33 | 668 | 1.56e-154 | 462 |
| MS.gene98967.t1 | AT1G21670 | 39.380 | 645 | 331 | 17 | 7 | 616 | 33 | 652 | 1.96e-132 | 405 |
Find 189 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTACGGTTCTCGAAAC+TGG | 0.212222 | 1.4:-16862371 | MS.gene98967:CDS |
| AGCAACAGCGATTAAGTTTC+CGG | 0.228347 | 1.4:+16862392 | None:intergenic |
| TTAGTAACAGACTCGAAAAT+TGG | 0.240371 | 1.4:+16861628 | None:intergenic |
| AAACGGTGGTGTTTATTAAA+AGG | 0.248477 | 1.4:-16861715 | MS.gene98967:CDS |
| CGCTGACACACCACCCAAAT+TGG | 0.263105 | 1.4:+16861138 | None:intergenic |
| GTTGTTGTTTACGGCCAATT+TGG | 0.301011 | 1.4:-16861152 | MS.gene98967:CDS |
| CGGTGACTGGTTGTTGTTTA+CGG | 0.313464 | 1.4:-16861161 | MS.gene98967:CDS |
| AGAGAAGGTAGAAGAAGTTC+AGG | 0.319822 | 1.4:+16862609 | None:intergenic |
| TTGTTTGTGGTGAGGTTGGA+TGG | 0.335057 | 1.4:-16861073 | MS.gene98967:CDS |
| GGTTTGAGGAGAGTTGAAAT+TGG | 0.335998 | 1.4:-16861238 | MS.gene98967:CDS |
| AACGCTATCAAATCACCTTT+TGG | 0.338364 | 1.4:+16861331 | None:intergenic |
| CGAGATCGAATATTTCAATA+TGG | 0.366320 | 1.4:+16862037 | None:intergenic |
| GGTTGGATGGGAGCGGGTTG+AGG | 0.369545 | 1.4:-16861060 | MS.gene98967:CDS |
| TATATAGTTGATGCAGTTAA+CGG | 0.377042 | 1.4:-16861424 | MS.gene98967:CDS |
| AGTCCTGCTGTTTCTCTAAC+CGG | 0.387441 | 1.4:-16862411 | MS.gene98967:CDS |
| GGGTGGTGTGTCAGCGGAGC+CGG | 0.391686 | 1.4:-16861131 | MS.gene98967:CDS |
| AGGATGGAGATGGTGGTGAT+TGG | 0.394343 | 1.4:-16860958 | MS.gene98967:CDS |
| GTGCATTTCAAGAACCACTA+TGG | 0.396040 | 1.4:-16860922 | MS.gene98967:CDS |
| TGTAAGCCTTGTTAAAGTTC+CGG | 0.401925 | 1.4:+16862455 | None:intergenic |
| TTAAAAGGAAGAACATGCTT+TGG | 0.404436 | 1.4:-16861700 | MS.gene98967:CDS |
| CTAAGAATAGTGAAGTGTTT+GGG | 0.405497 | 1.4:-16861288 | MS.gene98967:CDS |
| ATGGAAAATTCATAGTGTTT+CGG | 0.405877 | 1.4:-16861474 | MS.gene98967:CDS |
| GGTGGCTGGCCGACGTGGTT+AGG | 0.414222 | 1.4:-16862264 | MS.gene98967:CDS |
| AAAATCAGGATTTATTAAAT+CGG | 0.415312 | 1.4:+16861990 | None:intergenic |
| TCCGGTGCCGTCGACGGCAG+TGG | 0.416804 | 1.4:+16862473 | None:intergenic |
| TGGTGAGGTTGGATGGGAGC+GGG | 0.419050 | 1.4:-16861066 | MS.gene98967:CDS |
| TAGGTAAAACCGGGGTGAAC+CGG | 0.419381 | 1.4:+16862650 | None:intergenic |
| GGATTATAGTGATGAAAATC+AGG | 0.421055 | 1.4:+16861976 | None:intergenic |
| GGAGGTTAACGGAAGGTGAA+TGG | 0.421979 | 1.4:-16861378 | MS.gene98967:CDS |
| GTGTGGATGGTGGGAGGGAG+AGG | 0.422022 | 1.4:-16861210 | MS.gene98967:CDS |
| CCCGGTGGAGTGATGCGAAT+TGG | 0.424115 | 1.4:+16862141 | None:intergenic |
| ATTTATGTGGTGAATGTTGA+TGG | 0.432231 | 1.4:-16861265 | MS.gene98967:CDS |
| TTGTTGTTTACGGCCAATTT+GGG | 0.434673 | 1.4:-16861151 | MS.gene98967:CDS |
| CAGACCGGGTTAGGTAAAAC+CGG | 0.437249 | 1.4:+16862640 | None:intergenic |
| CGAATCAGTTTCAGCCGTAC+GGG | 0.437493 | 1.4:-16861099 | MS.gene98967:CDS |
| GCACGCCTACGTGGCATCAC+CGG | 0.440438 | 1.4:-16861009 | MS.gene98967:CDS |
| AATTGGCGAGGATTGAATTC+CGG | 0.441495 | 1.4:+16862158 | None:intergenic |
| AATGTTATTTACACTTCAAT+CGG | 0.441923 | 1.4:-16861652 | MS.gene98967:CDS |
| GAACCGACTCGCCTCTGAAT+CGG | 0.442453 | 1.4:+16861917 | None:intergenic |
| GATCTTGACGGCAATGTTAA+CGG | 0.444640 | 1.4:-16861769 | MS.gene98967:CDS |
| GGATTTGTTTGTGGTGAGGT+TGG | 0.445038 | 1.4:-16861077 | MS.gene98967:CDS |
| TGGCGGTTTGAGGAGGTTAA+CGG | 0.446424 | 1.4:-16861389 | MS.gene98967:CDS |
| TGTGTTTGAAGAGTCTGTTC+CGG | 0.447188 | 1.4:-16862313 | MS.gene98967:CDS |
| TGCAAGGATCGAGTTTGAAC+CGG | 0.447568 | 1.4:-16861593 | MS.gene98967:CDS |
| TTACAGGATTCGAATCTTAC+CGG | 0.451063 | 1.4:-16862177 | MS.gene98967:CDS |
| GGATGGAGATGGTGGTGATT+GGG | 0.451939 | 1.4:-16860957 | MS.gene98967:CDS |
| GTGTTTCGGTCTGGTAGGAC+CGG | 0.453415 | 1.4:-16861460 | MS.gene98967:CDS |
| CGGAATATCTTCACGATCAT+CGG | 0.455513 | 1.4:+16861561 | None:intergenic |
| GCTAAGAATAGTGAAGTGTT+TGG | 0.459293 | 1.4:-16861289 | MS.gene98967:CDS |
| CATTACACAACAACAATTCC+CGG | 0.461247 | 1.4:+16860990 | None:intergenic |
| AGTGTGTTGTTTGGAAGAGA+AGG | 0.462817 | 1.4:+16862594 | None:intergenic |
| CAAGAATCAGGTGAAACAAA+TGG | 0.464473 | 1.4:+16861955 | None:intergenic |
| GGTGTGTCAGCGGAGCCGGT+GGG | 0.465275 | 1.4:-16861127 | MS.gene98967:CDS |
| TGGTGTGTCAGCGGAGCCGG+TGG | 0.466679 | 1.4:-16861128 | MS.gene98967:CDS |
| TTCCTACGGTTCTCGAAACT+GGG | 0.469198 | 1.4:-16862370 | MS.gene98967:CDS |
| GCCAATTCGCATCACTCCAC+CGG | 0.473476 | 1.4:-16862142 | MS.gene98967:CDS |
| AGGAGGCTGATGGCGGTTTG+AGG | 0.473885 | 1.4:-16861399 | MS.gene98967:CDS |
| TTCAGAGGCGAGTCGGTTCA+AGG | 0.474144 | 1.4:-16861913 | MS.gene98967:CDS |
| AAGATTCGAATCCTGTAAAT+CGG | 0.474310 | 1.4:+16862182 | None:intergenic |
| ATTCTTCTCCGTCGGACTCC+AGG | 0.475156 | 1.4:+16861672 | None:intergenic |
| TGGTTGCTGAACACGGTGGC+TGG | 0.476430 | 1.4:-16862278 | MS.gene98967:CDS |
| TCTTGAAAGAGTGTGTTGTT+TGG | 0.477736 | 1.4:+16862585 | None:intergenic |
| ATCGTATCGCCGACGACGGT+TGG | 0.480105 | 1.4:-16862221 | MS.gene98967:CDS |
| GTGGTGAGGTTGGATGGGAG+CGG | 0.480325 | 1.4:-16861067 | MS.gene98967:CDS |
| TGTTTGTGGTGAGGTTGGAT+GGG | 0.481941 | 1.4:-16861072 | MS.gene98967:CDS |
| ATTCTTACAAAATATGATAG+TGG | 0.482448 | 1.4:-16861526 | MS.gene98967:CDS |
| GCGTTTAATCATGATCTTGA+CGG | 0.485592 | 1.4:-16861781 | MS.gene98967:CDS |
| CACGCCTACGTGGCATCACC+GGG | 0.486824 | 1.4:-16861008 | MS.gene98967:CDS |
| AGGAGAGTTGAAATTGGAAA+AGG | 0.488605 | 1.4:-16861232 | MS.gene98967:CDS |
| TAACCGATGTAACAAGAATC+AGG | 0.488768 | 1.4:+16861943 | None:intergenic |
| AGTAACCGTATGTTATCAAC+CGG | 0.490428 | 1.4:+16861853 | None:intergenic |
| GTGGTGAATGTTGATGGGAC+TGG | 0.492416 | 1.4:-16861259 | MS.gene98967:CDS |
| CGATCATCGGTGAGATGATC+CGG | 0.493314 | 1.4:+16861574 | None:intergenic |
| GCCGTACGGGGATTTGTTTG+TGG | 0.494815 | 1.4:-16861086 | MS.gene98967:CDS |
| TTGGAAAAGGTGTGGATGGT+GGG | 0.496494 | 1.4:-16861219 | MS.gene98967:CDS |
| CCGAATCAGTTTCAGCCGTA+CGG | 0.500527 | 1.4:-16861100 | MS.gene98967:CDS |
| GAACATGCTTTGGTAACTCC+TGG | 0.501342 | 1.4:-16861690 | MS.gene98967:CDS |
| ATGTTGATGGGACTGGTTTG+AGG | 0.503404 | 1.4:-16861252 | MS.gene98967:CDS |
| GTAAGAATCTTTAACGTAGA+CGG | 0.504157 | 1.4:+16861541 | None:intergenic |
| TGTAATGATGGTGATGAGGA+TGG | 0.512546 | 1.4:-16860974 | MS.gene98967:CDS |
| TGGATGGGAGCGGGTTGAGG+AGG | 0.514494 | 1.4:-16861057 | MS.gene98967:CDS |
| ATCGGTTACCACCGATTCAG+AGG | 0.518982 | 1.4:-16861928 | MS.gene98967:CDS |
| GCAACCACAACACGATTCTC+CGG | 0.518986 | 1.4:+16862294 | None:intergenic |
| ACTAAAATGAATCCACCATC+AGG | 0.519227 | 1.4:-16862849 | None:intergenic |
| CTAAAACTGTTCAAATTGCA+AGG | 0.519725 | 1.4:-16861609 | MS.gene98967:CDS |
| AAATTCATAGTGTTTCGGTC+TGG | 0.521920 | 1.4:-16861469 | MS.gene98967:CDS |
| TCCACTGCCGTCGACGGCAC+CGG | 0.524283 | 1.4:-16862474 | MS.gene98967:CDS |
| TTAATCGCTGTTGCTTCCTA+CGG | 0.525448 | 1.4:-16862384 | MS.gene98967:CDS |
| GGAGTGAAACAGTGCAATCC+CGG | 0.525617 | 1.4:+16862123 | None:intergenic |
| AAAAGGTGTGGATGGTGGGA+GGG | 0.531873 | 1.4:-16861215 | MS.gene98967:CDS |
| GAATTGTTGTTGTGTAATGA+TGG | 0.532795 | 1.4:-16860986 | MS.gene98967:CDS |
| ATTGGAAAAGGTGTGGATGG+TGG | 0.534198 | 1.4:-16861220 | MS.gene98967:CDS |
| GTATCGCCGACGACGGTTGG+TGG | 0.536417 | 1.4:-16862218 | MS.gene98967:CDS |
| ATGCCGTGCTGGTCACCAAA+AGG | 0.537563 | 1.4:-16861346 | MS.gene98967:CDS |
| TAAAGTTCCGGTGCCGTCGA+CGG | 0.537812 | 1.4:+16862467 | None:intergenic |
| GTGTGTCAGCGGAGCCGGTG+GGG | 0.538474 | 1.4:-16861126 | MS.gene98967:CDS |
| TCACCGTCCGGTGAGAAACT+CGG | 0.540615 | 1.4:+16861811 | None:intergenic |
| AACACGGTGGCTGGCCGACG+TGG | 0.541398 | 1.4:-16862269 | MS.gene98967:CDS |
| TTTGCATCGTGTTCACCTGA+TGG | 0.541695 | 1.4:-16861493 | MS.gene98967:CDS |
| GATATCACCGGGTCGAGGTG+TGG | 0.548700 | 1.4:+16861877 | None:intergenic |
| CCGTACGGCTGAAACTGATT+CGG | 0.548937 | 1.4:+16861100 | None:intergenic |
| GAAAAGGTGTGGATGGTGGG+AGG | 0.550360 | 1.4:-16861216 | MS.gene98967:CDS |
| TAAATAACATTCTTCTCCGT+CGG | 0.551900 | 1.4:+16861664 | None:intergenic |
| TCACCTGATTCTTGTTACAT+CGG | 0.555532 | 1.4:-16861946 | MS.gene98967:CDS |
| TACAATGGTTTGATGATCGT+TGG | 0.556337 | 1.4:+16862689 | None:intergenic |
| ACTTGTAATGCGTATGAGAA+TGG | 0.557600 | 1.4:-16861031 | MS.gene98967:CDS |
| AAAACGATGGTTCCTGATGG+TGG | 0.559289 | 1.4:+16862837 | None:intergenic |
| AGACCGGGTTAGGTAAAACC+GGG | 0.562551 | 1.4:+16862641 | None:intergenic |
| TTCGTTTCCGAGTTTCTCAC+CGG | 0.565511 | 1.4:-16861818 | MS.gene98967:CDS |
| TTCGTTCCGACGAGTTGCGA+CGG | 0.566225 | 1.4:+16862071 | None:intergenic |
| ATGTCACATGTAATCCATAG+TGG | 0.566839 | 1.4:+16860908 | None:intergenic |
| TAAGATCCAACGGTTCAAAA+CGG | 0.567820 | 1.4:-16861732 | MS.gene98967:CDS |
| CTGAGATGCCGTCGGTGAGA+CGG | 0.568119 | 1.4:+16862733 | None:intergenic |
| CCTCGACCCGGTGATATCTC+CGG | 0.569827 | 1.4:-16861872 | MS.gene98967:CDS |
| CCAATTCGCATCACTCCACC+GGG | 0.570259 | 1.4:-16862141 | MS.gene98967:CDS |
| TCATAGTGTTTCGGTCTGGT+AGG | 0.573423 | 1.4:-16861465 | MS.gene98967:CDS |
| AGGCTGATGGCGGTTTGAGG+AGG | 0.575296 | 1.4:-16861396 | MS.gene98967:CDS |
| TGAAGTGTTTGGGATTTATG+TGG | 0.575743 | 1.4:-16861278 | MS.gene98967:CDS |
| GTATTCGTCTCAGAACGAAC+CGG | 0.578102 | 1.4:-16862669 | MS.gene98967:CDS |
| CCACCGATTCAGAGGCGAGT+CGG | 0.583342 | 1.4:-16861920 | MS.gene98967:CDS |
| TTAACAAGGCTTACACCTCA+CGG | 0.583382 | 1.4:-16862447 | MS.gene98967:CDS |
| CAATTTGGGTGGTGTGTCAG+CGG | 0.585062 | 1.4:-16861137 | MS.gene98967:CDS |
| ACCGTAGGAAGAACTCAATA+CGG | 0.585069 | 1.4:-16862810 | MS.gene98967:CDS |
| TTTCATCGTATCGCCGACGA+CGG | 0.586216 | 1.4:-16862225 | MS.gene98967:CDS |
| AACGCGATGAAATCACCGTC+CGG | 0.587103 | 1.4:+16861799 | None:intergenic |
| AACGACCACCGTCTCACCGA+CGG | 0.587841 | 1.4:-16862741 | MS.gene98967:CDS |
| GTTTACTCCACTGCCGTCGA+CGG | 0.590057 | 1.4:-16862480 | MS.gene98967:CDS |
| GGATTGATACAATGCCGTGC+TGG | 0.590137 | 1.4:-16861357 | MS.gene98967:CDS |
| CGTGTTGTGGTTGCTGAACA+CGG | 0.590875 | 1.4:-16862285 | MS.gene98967:CDS |
| TATCTCCGGTTGATAACATA+CGG | 0.593586 | 1.4:-16861858 | MS.gene98967:CDS |
| AACTGATTCGGCAACCCCAC+CGG | 0.593630 | 1.4:+16861112 | None:intergenic |
| TTATCAACCGGAGATATCAC+CGG | 0.594323 | 1.4:+16861865 | None:intergenic |
| TGTTTCGGTCTGGTAGGACC+GGG | 0.594651 | 1.4:-16861459 | MS.gene98967:CDS |
| TTTATGTGGTGAATGTTGAT+GGG | 0.601260 | 1.4:-16861264 | MS.gene98967:CDS |
| GGTGATGAGGATGGAGATGG+TGG | 0.601314 | 1.4:-16860965 | MS.gene98967:CDS |
| AACCTATCCACACCTCGACC+CGG | 0.601449 | 1.4:-16861884 | MS.gene98967:CDS |
| CACCGGGTCGAGGTGTGGAT+AGG | 0.602167 | 1.4:+16861882 | None:intergenic |
| TATCAACCGGAGATATCACC+GGG | 0.603000 | 1.4:+16861866 | None:intergenic |
| GACGAGTTGCGACGGCGATG+CGG | 0.604618 | 1.4:+16862079 | None:intergenic |
| GTTTGGTTGATCATGAGTTG+AGG | 0.604723 | 1.4:+16862527 | None:intergenic |
| TCGAATCCTGTAAATCGGCT+CGG | 0.606272 | 1.4:+16862187 | None:intergenic |
| CCGGAGATATCACCGGGTCG+AGG | 0.607531 | 1.4:+16861872 | None:intergenic |
| AATGCTCCACCAACCGTCGT+CGG | 0.609347 | 1.4:+16862212 | None:intergenic |
| ACCACAAACAAATCCCCGTA+CGG | 0.609861 | 1.4:+16861085 | None:intergenic |
| TTTCCGGTTAGAGAAACAGC+AGG | 0.610699 | 1.4:+16862408 | None:intergenic |
| ACGGGGATTTGTTTGTGGTG+AGG | 0.612954 | 1.4:-16861081 | MS.gene98967:CDS |
| TTGTTTACGGCCAATTTGGG+TGG | 0.613893 | 1.4:-16861148 | MS.gene98967:CDS |
| GACGTGGTTAGGCGATTCAA+CGG | 0.616069 | 1.4:-16862253 | MS.gene98967:CDS |
| TGGAGTGATGCGAATTGGCG+AGG | 0.616833 | 1.4:+16862146 | None:intergenic |
| ATACGGTTACTAAGATTGAA+CGG | 0.617168 | 1.4:-16861841 | MS.gene98967:CDS |
| GTTGTGTAATGATGGTGATG+AGG | 0.617724 | 1.4:-16860978 | MS.gene98967:CDS |
| CCGACTCGCCTCTGAATCGG+TGG | 0.620363 | 1.4:+16861920 | None:intergenic |
| AACGGAGAGGAGGCTGATGG+CGG | 0.623851 | 1.4:-16861406 | MS.gene98967:CDS |
| TGGTAACTCCTGGAGTCCGA+CGG | 0.623909 | 1.4:-16861680 | MS.gene98967:CDS |
| GTTAACGGAGAGGAGGCTGA+TGG | 0.628428 | 1.4:-16861409 | MS.gene98967:CDS |
| GAAATTGGAAAAGGTGTGGA+TGG | 0.631748 | 1.4:-16861223 | MS.gene98967:CDS |
| CGGTGAGACGGTGGTCGTTG+TGG | 0.633652 | 1.4:+16862745 | None:intergenic |
| AGTTGAAATTGGAAAAGGTG+TGG | 0.635795 | 1.4:-16861227 | MS.gene98967:CDS |
| GCATCGCCGTCGCAACTCGT+CGG | 0.640596 | 1.4:-16862077 | MS.gene98967:CDS |
| ACCGTATTGAGTTCTTCCTA+CGG | 0.643400 | 1.4:+16862809 | None:intergenic |
| TTTCCGAGTTTCTCACCGGA+CGG | 0.643854 | 1.4:-16861814 | MS.gene98967:CDS |
| TGAGACGGTGGTCGTTGTGG+TGG | 0.644230 | 1.4:+16862748 | None:intergenic |
| GATCGAATATTTCAATATGG+CGG | 0.645205 | 1.4:+16862040 | None:intergenic |
| TCCTACGGTGTTGAAAACGA+TGG | 0.645525 | 1.4:+16862824 | None:intergenic |
| TCGTTCTGAGACGAATACAA+TGG | 0.647204 | 1.4:+16862674 | None:intergenic |
| TGATGCAGTTAACGGAGAGG+AGG | 0.647961 | 1.4:-16861416 | MS.gene98967:CDS |
| GATGGTGATGAGGATGGAGA+TGG | 0.650083 | 1.4:-16860968 | MS.gene98967:CDS |
| GTTAAGATCATAAGATCCAA+CGG | 0.652071 | 1.4:-16861742 | MS.gene98967:CDS |
| GTCCCAGTTTCGAGAACCGT+AGG | 0.656801 | 1.4:+16862368 | None:intergenic |
| GAATCAGTTTCAGCCGTACG+GGG | 0.658125 | 1.4:-16861098 | MS.gene98967:CDS |
| ATGAGAATGGCACGCCTACG+TGG | 0.659606 | 1.4:-16861018 | MS.gene98967:CDS |
| CAGAACGAACCGGTTCACCC+CGG | 0.664201 | 1.4:-16862659 | MS.gene98967:CDS |
| TGTTCCGGAGAATCGTGTTG+TGG | 0.664367 | 1.4:-16862298 | MS.gene98967:CDS |
| TTGAAAACGATGGTTCCTGA+TGG | 0.668162 | 1.4:+16862834 | None:intergenic |
| AGATGCCGTCGGTGAGACGG+TGG | 0.669562 | 1.4:+16862736 | None:intergenic |
| TACGGTTCTCGAAACTGGGA+CGG | 0.671056 | 1.4:-16862366 | MS.gene98967:CDS |
| GGTGATTGGGATAAGTTGAA+AGG | 0.675830 | 1.4:-16860944 | MS.gene98967:CDS |
| GAAGTTAACTGAGATGCCGT+CGG | 0.679503 | 1.4:+16862725 | None:intergenic |
| ACGGCACCGGAACTTTAACA+AGG | 0.681825 | 1.4:-16862461 | MS.gene98967:CDS |
| GTGAAACAGTGCAATCCCGG+TGG | 0.689783 | 1.4:+16862126 | None:intergenic |
| AGTTGATGCAGTTAACGGAG+AGG | 0.693237 | 1.4:-16861419 | MS.gene98967:CDS |
| GATCCAACGGTTCAAAACGG+TGG | 0.694672 | 1.4:-16861729 | MS.gene98967:CDS |
| GGTTTGAGGAGGTTAACGGA+AGG | 0.704150 | 1.4:-16861385 | MS.gene98967:CDS |
| AATTCCCGGTGATGCCACGT+AGG | 0.706031 | 1.4:+16861004 | None:intergenic |
| CTTGACGGCAATGTTAACGG+TGG | 0.730333 | 1.4:-16861766 | MS.gene98967:CDS |
| CTATAATCAACAACACCGTG+AGG | 0.738036 | 1.4:+16862432 | None:intergenic |
| GTTGAATCGCCTAACCACGT+CGG | 0.743244 | 1.4:+16862255 | None:intergenic |
| GACCGGGTTAGGTAAAACCG+GGG | 0.747672 | 1.4:+16862642 | None:intergenic |
| GTTGTGGTTGCTGAACACGG+TGG | 0.832300 | 1.4:-16862282 | MS.gene98967:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTACTGTTTTTAATTAT+TGG | + | chr1.4:16861192-16861211 | None:intergenic | 10.0% |
| !! | AAAATCAGGATTTATTAAAT+CGG | + | chr1.4:16861760-16861779 | None:intergenic | 15.0% |
| !!! | TATATACAAATTTTTAAACC+CGG | + | chr1.4:16862309-16862328 | None:intergenic | 15.0% |
| !! | ATTCTTACAAAATATGATAG+TGG | - | chr1.4:16862221-16862240 | MS.gene98967:CDS | 20.0% |
| !!! | AATGTTATTTACACTTCAAT+CGG | - | chr1.4:16862095-16862114 | MS.gene98967:CDS | 20.0% |
| !!! | TACTGTTTTTAATTATTGGA+CGG | + | chr1.4:16861188-16861207 | None:intergenic | 20.0% |
| ! | ATGGAAAATTCATAGTGTTT+CGG | - | chr1.4:16862273-16862292 | MS.gene98967:CDS | 25.0% |
| !! | TATATAGTTGATGCAGTTAA+CGG | - | chr1.4:16862323-16862342 | MS.gene98967:CDS | 25.0% |
| !!! | TTGAATCATGTTTGTTTTAG+CGG | - | chr1.4:16862560-16862579 | MS.gene98967:CDS | 25.0% |
| AAACGGTGGTGTTTATTAAA+AGG | - | chr1.4:16862032-16862051 | MS.gene98967:CDS | 30.0% | |
| AAGATTCGAATCCTGTAAAT+CGG | + | chr1.4:16861568-16861587 | None:intergenic | 30.0% | |
| ATACGGTTACTAAGATTGAA+CGG | - | chr1.4:16861906-16861925 | MS.gene98967:CDS | 30.0% | |
| ATTTATGTGGTGAATGTTGA+TGG | - | chr1.4:16862482-16862501 | MS.gene98967:CDS | 30.0% | |
| CGAGATCGAATATTTCAATA+TGG | + | chr1.4:16861713-16861732 | None:intergenic | 30.0% | |
| CTAAAACTGTTCAAATTGCA+AGG | - | chr1.4:16862138-16862157 | MS.gene98967:CDS | 30.0% | |
| GATCGAATATTTCAATATGG+CGG | + | chr1.4:16861710-16861729 | None:intergenic | 30.0% | |
| GGATTATAGTGATGAAAATC+AGG | + | chr1.4:16861774-16861793 | None:intergenic | 30.0% | |
| GTAAGAATCTTTAACGTAGA+CGG | + | chr1.4:16862209-16862228 | None:intergenic | 30.0% | |
| GTTAAGATCATAAGATCCAA+CGG | - | chr1.4:16862005-16862024 | MS.gene98967:CDS | 30.0% | |
| TAAATAACATTCTTCTCCGT+CGG | + | chr1.4:16862086-16862105 | None:intergenic | 30.0% | |
| TTAAAAGGAAGAACATGCTT+TGG | - | chr1.4:16862047-16862066 | MS.gene98967:CDS | 30.0% | |
| TTAGTAACAGACTCGAAAAT+TGG | + | chr1.4:16862122-16862141 | None:intergenic | 30.0% | |
| TTTATGTGGTGAATGTTGAT+GGG | - | chr1.4:16862483-16862502 | MS.gene98967:CDS | 30.0% | |
| ! | AACACTATGAATTTTCCATC+AGG | + | chr1.4:16862272-16862291 | None:intergenic | 30.0% |
| ! | CTAAGAATAGTGAAGTGTTT+GGG | - | chr1.4:16862459-16862478 | MS.gene98967:CDS | 30.0% |
| ! | GAATTGTTGTTGTGTAATGA+TGG | - | chr1.4:16862761-16862780 | MS.gene98967:CDS | 30.0% |
| AAATTCATAGTGTTTCGGTC+TGG | - | chr1.4:16862278-16862297 | MS.gene98967:CDS | 35.0% | |
| ACTTGTAATGCGTATGAGAA+TGG | - | chr1.4:16862716-16862735 | MS.gene98967:CDS | 35.0% | |
| AGGAGAGTTGAAATTGGAAA+AGG | - | chr1.4:16862515-16862534 | MS.gene98967:CDS | 35.0% | |
| AGTAACCGTATGTTATCAAC+CGG | + | chr1.4:16861897-16861916 | None:intergenic | 35.0% | |
| AGTTGAAATTGGAAAAGGTG+TGG | - | chr1.4:16862520-16862539 | MS.gene98967:CDS | 35.0% | |
| ATGTCACATGTAATCCATAG+TGG | + | chr1.4:16862842-16862861 | None:intergenic | 35.0% | |
| CAAGAATCAGGTGAAACAAA+TGG | + | chr1.4:16861795-16861814 | None:intergenic | 35.0% | |
| CATTACACAACAACAATTCC+CGG | + | chr1.4:16862760-16862779 | None:intergenic | 35.0% | |
| GCGTTTAATCATGATCTTGA+CGG | - | chr1.4:16861966-16861985 | MS.gene98967:CDS | 35.0% | |
| TAACCGATGTAACAAGAATC+AGG | + | chr1.4:16861807-16861826 | None:intergenic | 35.0% | |
| TAAGATCCAACGGTTCAAAA+CGG | - | chr1.4:16862015-16862034 | MS.gene98967:CDS | 35.0% | |
| TCACCTGATTCTTGTTACAT+CGG | - | chr1.4:16861801-16861820 | MS.gene98967:CDS | 35.0% | |
| TTACAGGATTCGAATCTTAC+CGG | - | chr1.4:16861570-16861589 | MS.gene98967:CDS | 35.0% | |
| ! | AACGCTATCAAATCACCTTT+TGG | + | chr1.4:16862419-16862438 | None:intergenic | 35.0% |
| ! | CGATTTTCGTGAACTCAAAA+CGG | - | chr1.4:16861404-16861423 | MS.gene98967:CDS | 35.0% |
| ! | GCTAAGAATAGTGAAGTGTT+TGG | - | chr1.4:16862458-16862477 | MS.gene98967:CDS | 35.0% |
| ! | TACAATGGTTTGATGATCGT+TGG | + | chr1.4:16861061-16861080 | None:intergenic | 35.0% |
| ! | TCTTGAAAGAGTGTGTTGTT+TGG | + | chr1.4:16861165-16861184 | None:intergenic | 35.0% |
| ! | TGAAGTGTTTGGGATTTATG+TGG | - | chr1.4:16862469-16862488 | MS.gene98967:CDS | 35.0% |
| !! | GTTCAGGTTTATTTTCAGAC+CGG | + | chr1.4:16861125-16861144 | None:intergenic | 35.0% |
| !! | TATCTCCGGTTGATAACATA+CGG | - | chr1.4:16861889-16861908 | MS.gene98967:CDS | 35.0% |
| !! | TGATAGCGTTTTCATCGAAT+AGG | - | chr1.4:16862429-16862448 | MS.gene98967:CDS | 35.0% |
| !! | TGTAAGCCTTGTTAAAGTTC+CGG | + | chr1.4:16861295-16861314 | None:intergenic | 35.0% |
| !! | TTCAGGTTTATTTTCAGACC+GGG | + | chr1.4:16861124-16861143 | None:intergenic | 35.0% |
| !! | TTGTTGTTTACGGCCAATTT+GGG | - | chr1.4:16862596-16862615 | MS.gene98967:CDS | 35.0% |
| AATTGGCGAGGATTGAATTC+CGG | + | chr1.4:16861592-16861611 | None:intergenic | 40.0% | |
| ACCGTAGGAAGAACTCAATA+CGG | - | chr1.4:16860937-16860956 | MS.gene98967:CDS | 40.0% | |
| ACCGTATTGAGTTCTTCCTA+CGG | + | chr1.4:16860941-16860960 | None:intergenic | 40.0% | |
| AGAGAAGGTAGAAGAAGTTC+AGG | + | chr1.4:16861141-16861160 | None:intergenic | 40.0% | |
| AGCAACAGCGATTAAGTTTC+CGG | + | chr1.4:16861358-16861377 | None:intergenic | 40.0% | |
| CGGAATATCTTCACGATCAT+CGG | + | chr1.4:16862189-16862208 | None:intergenic | 40.0% | |
| CTATAATCAACAACACCGTG+AGG | + | chr1.4:16861318-16861337 | None:intergenic | 40.0% | |
| GATCTTGACGGCAATGTTAA+CGG | - | chr1.4:16861978-16861997 | MS.gene98967:CDS | 40.0% | |
| GGTTTGAGGAGAGTTGAAAT+TGG | - | chr1.4:16862509-16862528 | MS.gene98967:CDS | 40.0% | |
| GTGCATTTCAAGAACCACTA+TGG | - | chr1.4:16862825-16862844 | MS.gene98967:CDS | 40.0% | |
| GTTTGGTTGATCATGAGTTG+AGG | + | chr1.4:16861223-16861242 | None:intergenic | 40.0% | |
| TGTGTTTGAAGAGTCTGTTC+CGG | - | chr1.4:16861434-16861453 | MS.gene98967:CDS | 40.0% | |
| TTAACAAGGCTTACACCTCA+CGG | - | chr1.4:16861300-16861319 | MS.gene98967:CDS | 40.0% | |
| TTATCAACCGGAGATATCAC+CGG | + | chr1.4:16861885-16861904 | None:intergenic | 40.0% | |
| TTGAAAACGATGGTTCCTGA+TGG | + | chr1.4:16860916-16860935 | None:intergenic | 40.0% | |
| ! | GAAATTGGAAAAGGTGTGGA+TGG | - | chr1.4:16862524-16862543 | MS.gene98967:CDS | 40.0% |
| ! | GGTGATTGGGATAAGTTGAA+AGG | - | chr1.4:16862803-16862822 | MS.gene98967:CDS | 40.0% |
| ! | GTTGTGTAATGATGGTGATG+AGG | - | chr1.4:16862769-16862788 | MS.gene98967:CDS | 40.0% |
| ! | TGTAATGATGGTGATGAGGA+TGG | - | chr1.4:16862773-16862792 | MS.gene98967:CDS | 40.0% |
| ! | TTAATCGCTGTTGCTTCCTA+CGG | - | chr1.4:16861363-16861382 | MS.gene98967:CDS | 40.0% |
| !! | AGTGTGTTGTTTGGAAGAGA+AGG | + | chr1.4:16861156-16861175 | None:intergenic | 40.0% |
| !! | GTTGTTGTTTACGGCCAATT+TGG | - | chr1.4:16862595-16862614 | MS.gene98967:CDS | 40.0% |
| !! | GTTTATTTTCAGACCGGGTT+AGG | + | chr1.4:16861119-16861138 | None:intergenic | 40.0% |
| !! | TCGTTCTGAGACGAATACAA+TGG | + | chr1.4:16861076-16861095 | None:intergenic | 40.0% |
| !!! | CATGTTTGTTTTAGCGGTGA+CGG | - | chr1.4:16862566-16862585 | MS.gene98967:CDS | 40.0% |
| AAAACGATGGTTCCTGATGG+TGG | + | chr1.4:16860913-16860932 | None:intergenic | 45.0% | |
| ACCACAAACAAATCCCCGTA+CGG | + | chr1.4:16862665-16862684 | None:intergenic | 45.0% | |
| GAAGTTAACTGAGATGCCGT+CGG | + | chr1.4:16861025-16861044 | None:intergenic | 45.0% | |
| GTATTCGTCTCAGAACGAAC+CGG | - | chr1.4:16861078-16861097 | MS.gene98967:CDS | 45.0% | |
| TATCAACCGGAGATATCACC+GGG | + | chr1.4:16861884-16861903 | None:intergenic | 45.0% | |
| TCATAGTGTTTCGGTCTGGT+AGG | - | chr1.4:16862282-16862301 | MS.gene98967:CDS | 45.0% | |
| TCGAATCCTGTAAATCGGCT+CGG | + | chr1.4:16861563-16861582 | None:intergenic | 45.0% | |
| TGCAAGGATCGAGTTTGAAC+CGG | - | chr1.4:16862154-16862173 | MS.gene98967:CDS | 45.0% | |
| TGTTTGTGGTGAGGTTGGAT+GGG | - | chr1.4:16862675-16862694 | MS.gene98967:CDS | 45.0% | |
| TTCCTACGGTTCTCGAAACT+GGG | - | chr1.4:16861377-16861396 | MS.gene98967:CDS | 45.0% | |
| TTCGTTTCCGAGTTTCTCAC+CGG | - | chr1.4:16861929-16861948 | MS.gene98967:CDS | 45.0% | |
| TTGTTTACGGCCAATTTGGG+TGG | - | chr1.4:16862599-16862618 | MS.gene98967:CDS | 45.0% | |
| TTGTTTGTGGTGAGGTTGGA+TGG | - | chr1.4:16862674-16862693 | MS.gene98967:CDS | 45.0% | |
| TTTCCGGTTAGAGAAACAGC+AGG | + | chr1.4:16861342-16861361 | None:intergenic | 45.0% | |
| TTTGCATCGTGTTCACCTGA+TGG | - | chr1.4:16862254-16862273 | MS.gene98967:CDS | 45.0% | |
| ! | ACCATCGTTTTCAACACCGT+AGG | - | chr1.4:16860922-16860941 | MS.gene98967:CDS | 45.0% |
| ! | AGTTGATGCAGTTAACGGAG+AGG | - | chr1.4:16862328-16862347 | MS.gene98967:CDS | 45.0% |
| ! | ATTGGAAAAGGTGTGGATGG+TGG | - | chr1.4:16862527-16862546 | MS.gene98967:CDS | 45.0% |
| ! | GAACATGCTTTGGTAACTCC+TGG | - | chr1.4:16862057-16862076 | MS.gene98967:CDS | 45.0% |
| ! | GGATTTGTTTGTGGTGAGGT+TGG | - | chr1.4:16862670-16862689 | MS.gene98967:CDS | 45.0% |
| ! | TCCTACGGTGTTGAAAACGA+TGG | + | chr1.4:16860926-16860945 | None:intergenic | 45.0% |
| ! | TTGGAAAAGGTGTGGATGGT+GGG | - | chr1.4:16862528-16862547 | MS.gene98967:CDS | 45.0% |
| !! | AGTCCTGCTGTTTCTCTAAC+CGG | - | chr1.4:16861336-16861355 | MS.gene98967:CDS | 45.0% |
| !! | ATGTTGATGGGACTGGTTTG+AGG | - | chr1.4:16862495-16862514 | MS.gene98967:CDS | 45.0% |
| !! | CATTTTCCGAGCCGATTTAC+AGG | - | chr1.4:16861554-16861573 | MS.gene98967:CDS | 45.0% |
| !! | CGGTGACTGGTTGTTGTTTA+CGG | - | chr1.4:16862586-16862605 | MS.gene98967:CDS | 45.0% |
| !!! | GCGGTTGCTGTTTTGTATTG+CGG | + | chr1.4:16861652-16861671 | None:intergenic | 45.0% |
| !!! | GTTGCTGTTTTGTATTGCGG+CGG | + | chr1.4:16861649-16861668 | None:intergenic | 45.0% |
| !!! | TTGCTGTTTTGTATTGCGGC+GGG | + | chr1.4:16861648-16861667 | None:intergenic | 45.0% |
| AACGCGATGAAATCACCGTC+CGG | + | chr1.4:16861951-16861970 | None:intergenic | 50.0% | |
| CAATTTGGGTGGTGTGTCAG+CGG | - | chr1.4:16862610-16862629 | MS.gene98967:CDS | 50.0% | |
| CCGAATCAGTTTCAGCCGTA+CGG | - | chr1.4:16862647-16862666 | MS.gene98967:CDS | 50.0% | |
| CCGTACGGCTGAAACTGATT+CGG | + | chr1.4:16862650-16862669 | None:intergenic | 50.0% | |
| CGAATCAGTTTCAGCCGTAC+GGG | - | chr1.4:16862648-16862667 | MS.gene98967:CDS | 50.0% | |
| CGATCATCGGTGAGATGATC+CGG | + | chr1.4:16862176-16862195 | None:intergenic | 50.0% | |
| CGTGTTGTGGTTGCTGAACA+CGG | - | chr1.4:16861462-16861481 | MS.gene98967:CDS | 50.0% | |
| CTTCCTACGGTTCTCGAAAC+TGG | - | chr1.4:16861376-16861395 | MS.gene98967:CDS | 50.0% | |
| CTTGACGGCAATGTTAACGG+TGG | - | chr1.4:16861981-16862000 | MS.gene98967:CDS | 50.0% | |
| GAATCAGTTTCAGCCGTACG+GGG | - | chr1.4:16862649-16862668 | MS.gene98967:CDS | 50.0% | |
| GACGTGGTTAGGCGATTCAA+CGG | - | chr1.4:16861494-16861513 | MS.gene98967:CDS | 50.0% | |
| GATCCAACGGTTCAAAACGG+TGG | - | chr1.4:16862018-16862037 | MS.gene98967:CDS | 50.0% | |
| GCAACCACAACACGATTCTC+CGG | + | chr1.4:16861456-16861475 | None:intergenic | 50.0% | |
| GGAGGTTAACGGAAGGTGAA+TGG | - | chr1.4:16862369-16862388 | MS.gene98967:CDS | 50.0% | |
| GGAGTGAAACAGTGCAATCC+CGG | + | chr1.4:16861627-16861646 | None:intergenic | 50.0% | |
| GGATTGATACAATGCCGTGC+TGG | - | chr1.4:16862390-16862409 | MS.gene98967:CDS | 50.0% | |
| GGTTTGAGGAGGTTAACGGA+AGG | - | chr1.4:16862362-16862381 | MS.gene98967:CDS | 50.0% | |
| GTTGAATCGCCTAACCACGT+CGG | + | chr1.4:16861495-16861514 | None:intergenic | 50.0% | |
| TACGGTTCTCGAAACTGGGA+CGG | - | chr1.4:16861381-16861400 | MS.gene98967:CDS | 50.0% | |
| TAGGTAAAACCGGGGTGAAC+CGG | + | chr1.4:16861100-16861119 | None:intergenic | 50.0% | |
| TGATGCAGTTAACGGAGAGG+AGG | - | chr1.4:16862331-16862350 | MS.gene98967:CDS | 50.0% | |
| TGGCGGTTTGAGGAGGTTAA+CGG | - | chr1.4:16862358-16862377 | MS.gene98967:CDS | 50.0% | |
| TGTTCCGGAGAATCGTGTTG+TGG | - | chr1.4:16861449-16861468 | MS.gene98967:CDS | 50.0% | |
| TTTCATCGTATCGCCGACGA+CGG | - | chr1.4:16861522-16861541 | MS.gene98967:CDS | 50.0% | |
| TTTCCGAGTTTCTCACCGGA+CGG | - | chr1.4:16861933-16861952 | MS.gene98967:CDS | 50.0% | |
| ! | ACGGCACCGGAACTTTAACA+AGG | - | chr1.4:16861286-16861305 | MS.gene98967:CDS | 50.0% |
| ! | ACGGGGATTTGTTTGTGGTG+AGG | - | chr1.4:16862666-16862685 | MS.gene98967:CDS | 50.0% |
| ! | AGACCGGGTTAGGTAAAACC+GGG | + | chr1.4:16861109-16861128 | None:intergenic | 50.0% |
| ! | AGGATGGAGATGGTGGTGAT+TGG | - | chr1.4:16862789-16862808 | MS.gene98967:CDS | 50.0% |
| ! | CAGACCGGGTTAGGTAAAAC+CGG | + | chr1.4:16861110-16861129 | None:intergenic | 50.0% |
| ! | GATGGTGATGAGGATGGAGA+TGG | - | chr1.4:16862779-16862798 | MS.gene98967:CDS | 50.0% |
| ! | GGATGGAGATGGTGGTGATT+GGG | - | chr1.4:16862790-16862809 | MS.gene98967:CDS | 50.0% |
| ! | GTGGTGAATGTTGATGGGAC+TGG | - | chr1.4:16862488-16862507 | MS.gene98967:CDS | 50.0% |
| !! | AAAAGGTGTGGATGGTGGGA+GGG | - | chr1.4:16862532-16862551 | MS.gene98967:CDS | 50.0% |
| !! | ACACCACCGTTTTGAACCGT+TGG | + | chr1.4:16862024-16862043 | None:intergenic | 50.0% |
| !! | ATCGGTTACCACCGATTCAG+AGG | - | chr1.4:16861819-16861838 | MS.gene98967:CDS | 50.0% |
| !! | GCGCTTTTGAAAAGCGCGTT+TGG | + | chr1.4:16861240-16861259 | None:intergenic | 50.0% |
| !! | TCACCTTTTGGTGACCAGCA+CGG | + | chr1.4:16862407-16862426 | None:intergenic | 50.0% |
| AACCTATCCACACCTCGACC+CGG | - | chr1.4:16861863-16861882 | MS.gene98967:CDS | 55.0% | |
| AATGCTCCACCAACCGTCGT+CGG | + | chr1.4:16861538-16861557 | None:intergenic | 55.0% | |
| AATTCCCGGTGATGCCACGT+AGG | + | chr1.4:16862746-16862765 | None:intergenic | 55.0% | |
| ATGAGAATGGCACGCCTACG+TGG | - | chr1.4:16862729-16862748 | MS.gene98967:CDS | 55.0% | |
| ATTCTTCTCCGTCGGACTCC+AGG | + | chr1.4:16862078-16862097 | None:intergenic | 55.0% | |
| CCAATTCGCATCACTCCACC+GGG | - | chr1.4:16861606-16861625 | MS.gene98967:CDS | 55.0% | |
| CGCTGACACACCACCCAAAT+TGG | + | chr1.4:16862612-16862631 | None:intergenic | 55.0% | |
| GCCAATTCGCATCACTCCAC+CGG | - | chr1.4:16861605-16861624 | MS.gene98967:CDS | 55.0% | |
| GGTGATGAGGATGGAGATGG+TGG | - | chr1.4:16862782-16862801 | MS.gene98967:CDS | 55.0% | |
| GTCCCAGTTTCGAGAACCGT+AGG | + | chr1.4:16861382-16861401 | None:intergenic | 55.0% | |
| GTGAAACAGTGCAATCCCGG+TGG | + | chr1.4:16861624-16861643 | None:intergenic | 55.0% | |
| GTGTTTCGGTCTGGTAGGAC+CGG | - | chr1.4:16862287-16862306 | MS.gene98967:CDS | 55.0% | |
| GTTAACGGAGAGGAGGCTGA+TGG | - | chr1.4:16862338-16862357 | MS.gene98967:CDS | 55.0% | |
| GTTGTGGTTGCTGAACACGG+TGG | - | chr1.4:16861465-16861484 | MS.gene98967:CDS | 55.0% | |
| GTTTACTCCACTGCCGTCGA+CGG | - | chr1.4:16861267-16861286 | MS.gene98967:CDS | 55.0% | |
| TCACCGTCCGGTGAGAAACT+CGG | + | chr1.4:16861939-16861958 | None:intergenic | 55.0% | |
| TGGAGTGATGCGAATTGGCG+AGG | + | chr1.4:16861604-16861623 | None:intergenic | 55.0% | |
| TGGTAACTCCTGGAGTCCGA+CGG | - | chr1.4:16862067-16862086 | MS.gene98967:CDS | 55.0% | |
| TGTTTCGGTCTGGTAGGACC+GGG | - | chr1.4:16862288-16862307 | MS.gene98967:CDS | 55.0% | |
| TTCGTTCCGACGAGTTGCGA+CGG | + | chr1.4:16861679-16861698 | None:intergenic | 55.0% | |
| ! | ATGCCGTGCTGGTCACCAAA+AGG | - | chr1.4:16862401-16862420 | MS.gene98967:CDS | 55.0% |
| ! | CACCCCGGTTTTACCTAACC+CGG | - | chr1.4:16861103-16861122 | MS.gene98967:CDS | 55.0% |
| ! | GACCGGGTTAGGTAAAACCG+GGG | + | chr1.4:16861108-16861127 | None:intergenic | 55.0% |
| ! | GCCGTACGGGGATTTGTTTG+TGG | - | chr1.4:16862661-16862680 | MS.gene98967:CDS | 55.0% |
| ! | TTCAGAGGCGAGTCGGTTCA+AGG | - | chr1.4:16861834-16861853 | MS.gene98967:CDS | 55.0% |
| !! | AACTGATTCGGCAACCCCAC+CGG | + | chr1.4:16862638-16862657 | None:intergenic | 55.0% |
| !! | GAAAAGGTGTGGATGGTGGG+AGG | - | chr1.4:16862531-16862550 | MS.gene98967:CDS | 55.0% |
| !! | GAACCGACTCGCCTCTGAAT+CGG | + | chr1.4:16861833-16861852 | None:intergenic | 55.0% |
| !! | GTTTTAGCGGTGACGGTGAC+TGG | - | chr1.4:16862573-16862592 | MS.gene98967:CDS | 55.0% |
| !! | TAAAGTTCCGGTGCCGTCGA+CGG | + | chr1.4:16861283-16861302 | None:intergenic | 55.0% |
| AACGACCACCGTCTCACCGA+CGG | - | chr1.4:16861006-16861025 | MS.gene98967:CDS | 60.0% | |
| AACGGAGAGGAGGCTGATGG+CGG | - | chr1.4:16862341-16862360 | MS.gene98967:CDS | 60.0% | |
| ATCGTATCGCCGACGACGGT+TGG | - | chr1.4:16861526-16861545 | MS.gene98967:CDS | 60.0% | |
| CCCGGTGGAGTGATGCGAAT+TGG | + | chr1.4:16861609-16861628 | None:intergenic | 60.0% | |
| CCTCGACCCGGTGATATCTC+CGG | - | chr1.4:16861875-16861894 | MS.gene98967:CDS | 60.0% | |
| CTGAGATGCCGTCGGTGAGA+CGG | + | chr1.4:16861017-16861036 | None:intergenic | 60.0% | |
| GATATCACCGGGTCGAGGTG+TGG | + | chr1.4:16861873-16861892 | None:intergenic | 60.0% | |
| GTGGTGAGGTTGGATGGGAG+CGG | - | chr1.4:16862680-16862699 | MS.gene98967:CDS | 60.0% | |
| TGAGACGGTGGTCGTTGTGG+TGG | + | chr1.4:16861002-16861021 | None:intergenic | 60.0% | |
| TGGTGAGGTTGGATGGGAGC+GGG | - | chr1.4:16862681-16862700 | MS.gene98967:CDS | 60.0% | |
| TGGTTGCTGAACACGGTGGC+TGG | - | chr1.4:16861469-16861488 | MS.gene98967:CDS | 60.0% | |
| ! | CAGAACGAACCGGTTCACCC+CGG | - | chr1.4:16861088-16861107 | MS.gene98967:CDS | 60.0% |
| !! | AGGAGGCTGATGGCGGTTTG+AGG | - | chr1.4:16862348-16862367 | MS.gene98967:CDS | 60.0% |
| !! | AGGCTGATGGCGGTTTGAGG+AGG | - | chr1.4:16862351-16862370 | MS.gene98967:CDS | 60.0% |
| !! | CCACCGATTCAGAGGCGAGT+CGG | - | chr1.4:16861827-16861846 | MS.gene98967:CDS | 60.0% |
| AGATGCCGTCGGTGAGACGG+TGG | + | chr1.4:16861014-16861033 | None:intergenic | 65.0% | |
| CACCGGGTCGAGGTGTGGAT+AGG | + | chr1.4:16861868-16861887 | None:intergenic | 65.0% | |
| CACGCCTACGTGGCATCACC+GGG | - | chr1.4:16862739-16862758 | MS.gene98967:CDS | 65.0% | |
| CCGGAGATATCACCGGGTCG+AGG | + | chr1.4:16861878-16861897 | None:intergenic | 65.0% | |
| CGGTGAGACGGTGGTCGTTG+TGG | + | chr1.4:16861005-16861024 | None:intergenic | 65.0% | |
| GACGAGTTGCGACGGCGATG+CGG | + | chr1.4:16861671-16861690 | None:intergenic | 65.0% | |
| GCACGCCTACGTGGCATCAC+CGG | - | chr1.4:16862738-16862757 | MS.gene98967:CDS | 65.0% | |
| GCATCGCCGTCGCAACTCGT+CGG | - | chr1.4:16861670-16861689 | MS.gene98967:CDS | 65.0% | |
| GTATCGCCGACGACGGTTGG+TGG | - | chr1.4:16861529-16861548 | MS.gene98967:CDS | 65.0% | |
| ! | CCGACTCGCCTCTGAATCGG+TGG | + | chr1.4:16861830-16861849 | None:intergenic | 65.0% |
| !! | GGTTGGATGGGAGCGGGTTG+AGG | - | chr1.4:16862687-16862706 | MS.gene98967:CDS | 65.0% |
| !! | GTGTGGATGGTGGGAGGGAG+AGG | - | chr1.4:16862537-16862556 | MS.gene98967:CDS | 65.0% |
| !! | TGGATGGGAGCGGGTTGAGG+AGG | - | chr1.4:16862690-16862709 | MS.gene98967:CDS | 65.0% |
| GGGTGGTGTGTCAGCGGAGC+CGG | - | chr1.4:16862616-16862635 | MS.gene98967:CDS | 70.0% | |
| GGTGTGTCAGCGGAGCCGGT+GGG | - | chr1.4:16862620-16862639 | MS.gene98967:CDS | 70.0% | |
| GTGTGTCAGCGGAGCCGGTG+GGG | - | chr1.4:16862621-16862640 | MS.gene98967:CDS | 70.0% | |
| TCCACTGCCGTCGACGGCAC+CGG | - | chr1.4:16861273-16861292 | MS.gene98967:CDS | 70.0% | |
| TGGTGTGTCAGCGGAGCCGG+TGG | - | chr1.4:16862619-16862638 | MS.gene98967:CDS | 70.0% | |
| ! | AACACGGTGGCTGGCCGACG+TGG | - | chr1.4:16861478-16861497 | MS.gene98967:CDS | 70.0% |
| ! | GGTGGCTGGCCGACGTGGTT+AGG | - | chr1.4:16861483-16861502 | MS.gene98967:CDS | 70.0% |
| !! | TCCGGTGCCGTCGACGGCAG+TGG | + | chr1.4:16861277-16861296 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 16860904 | 16862865 | 16860904 | ID=MS.gene98967 |
| chr1.4 | mRNA | 16860904 | 16862865 | 16860904 | ID=MS.gene98967.t1;Parent=MS.gene98967 |
| chr1.4 | exon | 16860904 | 16862865 | 16860904 | ID=MS.gene98967.t1.exon1;Parent=MS.gene98967.t1 |
| chr1.4 | CDS | 16860904 | 16862865 | 16860904 | ID=cds.MS.gene98967.t1;Parent=MS.gene98967.t1 |
| Gene Sequence |
| Protein sequence |
