Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054435.t1 | XP_003626244.1 | 97.2 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 2.00E-184 | 654.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054435.t1 | I6YGS0 | 34.2 | 319 | 192 | 6 | 7 | 316 | 7 | 316 | 1.0e-51 | 205.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054435.t1 | A2Q321 | 97.2 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 1.5e-184 | 654.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050354 | MS.gene054435 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene054435 | 0.991407 | 1.75E-187 | -1.69E-46 |
| MS.gene052413 | MS.gene054435 | -0.814192 | 1.75E-51 | -1.69E-46 |
| MS.gene054435 | MS.gene054437 | 0.978448 | 7.58E-146 | -1.69E-46 |
| MS.gene054435 | MS.gene054447 | 0.982417 | 4.89E-155 | -1.69E-46 |
| MS.gene054435 | MS.gene056942 | -0.800305 | 1.53E-48 | -1.69E-46 |
| MS.gene054435 | MS.gene05883 | -0.801726 | 7.86E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene063365 | 0.808481 | 3.03E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene064237 | -0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene069486 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene054435 | MS.gene072518 | 0.990788 | 2.50E-184 | -1.69E-46 |
| MS.gene054435 | MS.gene073310 | -0.816004 | 6.92E-52 | -1.69E-46 |
| MS.gene054435 | MS.gene07408 | -0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene074189 | 0.804896 | 1.73E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene07914 | 0.836738 | 7.85E-57 | -1.69E-46 |
| MS.gene054435 | MS.gene08254 | -0.806535 | 7.85E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene21349 | 0.800041 | 1.74E-48 | -1.69E-46 |
| MS.gene054435 | MS.gene32061 | 0.806721 | 7.17E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene33465 | 0.805916 | 1.06E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene37321 | 0.988651 | 7.34E-175 | -1.69E-46 |
| MS.gene054435 | MS.gene40000 | 0.818917 | 1.53E-52 | -1.69E-46 |
| MS.gene054435 | MS.gene40322 | 0.819409 | 1.18E-52 | -1.69E-46 |
| MS.gene054435 | MS.gene40481 | 0.849991 | 2.27E-60 | -1.69E-46 |
| MS.gene054435 | MS.gene40664 | 0.811231 | 7.76E-51 | -1.69E-46 |
| MS.gene054435 | MS.gene44430 | -0.804686 | 1.92E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene45618 | -0.809562 | 1.78E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene45619 | -0.819813 | 9.54E-53 | -1.69E-46 |
| MS.gene054435 | MS.gene45737 | 0.823522 | 1.32E-53 | -1.69E-46 |
| MS.gene054435 | MS.gene54328 | 0.812589 | 3.93E-51 | -1.69E-46 |
| MS.gene054435 | MS.gene57812 | 0.824357 | 8.44E-54 | -1.69E-46 |
| MS.gene054435 | MS.gene59273 | 0.806334 | 8.65E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene60166 | -0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene62174 | 0.810624 | 1.05E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene63292 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene63502 | 0.805736 | 1.16E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene70482 | -0.811139 | 8.13E-51 | -1.69E-46 |
| MS.gene054435 | MS.gene72426 | 0.801273 | 9.73E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene75310 | 0.819075 | 1.40E-52 | -1.69E-46 |
| MS.gene054435 | MS.gene76325 | 0.85767 | 1.39E-62 | -1.69E-46 |
| MS.gene054435 | MS.gene80028 | 0.800104 | 1.69E-48 | -1.69E-46 |
| MS.gene054435 | MS.gene80887 | 0.816671 | 4.90E-52 | -1.69E-46 |
| MS.gene054435 | MS.gene82008 | -0.806185 | 9.30E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene85580 | -0.813584 | 2.38E-51 | -1.69E-46 |
| MS.gene054435 | MS.gene86018 | -0.80666 | 7.39E-50 | -1.69E-46 |
| MS.gene054435 | MS.gene90192 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene91976 | 0.80276 | 4.81E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene91977 | 0.811733 | 6.04E-51 | -1.69E-46 |
| MS.gene054435 | MS.gene96348 | -0.815794 | 7.70E-52 | -1.69E-46 |
| MS.gene054435 | MS.gene97180 | 0.803514 | 3.36E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene97562 | 0.801091 | 1.06E-48 | -1.69E-46 |
| MS.gene054435 | MS.gene98967 | 0.800086 | 1.70E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene77823 | MS.gene054435 | PPI |
| MS.gene054435 | MS.gene07001 | PPI |
| MS.gene054435 | MS.gene066361 | PPI |
| MS.gene071504 | MS.gene054435 | PPI |
| MS.gene054435 | MS.gene035371 | PPI |
| MS.gene012063 | MS.gene054435 | PPI |
| MS.gene071502 | MS.gene054435 | PPI |
| MS.gene066360 | MS.gene054435 | PPI |
| MS.gene89620 | MS.gene054435 | PPI |
| MS.gene035369 | MS.gene054435 | PPI |
| MS.gene054435 | MS.gene041604 | PPI |
| MS.gene054435 | MS.gene22955 | PPI |
| MS.gene76453 | MS.gene054435 | PPI |
| MS.gene054435 | MS.gene071500 | PPI |
| MS.gene025707 | MS.gene054435 | PPI |
| MS.gene035373 | MS.gene054435 | PPI |
| MS.gene035367 | MS.gene054435 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054435.t1 | MTR_7g113030 | 97.179 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 0.0 | 649 |
| MS.gene054435.t1 | MTR_7g113050 | 94.357 | 319 | 18 | 0 | 1 | 319 | 1 | 319 | 0.0 | 633 |
| MS.gene054435.t1 | MTR_7g112615 | 91.850 | 319 | 26 | 0 | 1 | 319 | 1 | 319 | 0.0 | 616 |
| MS.gene054435.t1 | MTR_7g112620 | 86.834 | 319 | 42 | 0 | 1 | 319 | 1 | 319 | 0.0 | 589 |
| MS.gene054435.t1 | MTR_7g113020 | 86.207 | 319 | 44 | 0 | 1 | 319 | 1 | 319 | 0.0 | 587 |
| MS.gene054435.t1 | MTR_7g112960 | 75.862 | 319 | 77 | 0 | 1 | 319 | 1 | 319 | 0.0 | 520 |
| MS.gene054435.t1 | MTR_7g112963 | 76.176 | 319 | 76 | 0 | 1 | 319 | 1 | 319 | 0.0 | 513 |
| MS.gene054435.t1 | MTR_7g112970 | 75.549 | 319 | 75 | 1 | 1 | 319 | 1 | 316 | 0.0 | 511 |
| MS.gene054435.t1 | MTR_4g005160 | 73.684 | 323 | 80 | 3 | 1 | 319 | 1 | 322 | 0.0 | 508 |
| MS.gene054435.t1 | MTR_7g113050 | 93.249 | 237 | 16 | 0 | 1 | 237 | 1 | 237 | 3.23e-169 | 469 |
| MS.gene054435.t1 | MTR_7g112615 | 91.561 | 237 | 20 | 0 | 1 | 237 | 1 | 237 | 4.68e-166 | 461 |
| MS.gene054435.t1 | MTR_7g113010 | 72.242 | 281 | 78 | 0 | 1 | 281 | 1 | 281 | 7.64e-153 | 441 |
| MS.gene054435.t1 | MTR_4g120240 | 61.059 | 321 | 121 | 3 | 1 | 319 | 37 | 355 | 7.11e-145 | 412 |
| MS.gene054435.t1 | MTR_7g108825 | 60.815 | 319 | 123 | 2 | 1 | 319 | 1 | 317 | 8.07e-141 | 400 |
| MS.gene054435.t1 | MTR_8g076680 | 48.297 | 323 | 155 | 4 | 1 | 319 | 3 | 317 | 2.37e-106 | 313 |
| MS.gene054435.t1 | MTR_7g112615 | 90.566 | 159 | 15 | 0 | 1 | 159 | 1 | 159 | 3.48e-106 | 307 |
| MS.gene054435.t1 | MTR_7g108825 | 59.494 | 237 | 94 | 2 | 1 | 237 | 1 | 235 | 5.34e-98 | 289 |
| MS.gene054435.t1 | MTR_7g112910 | 58.635 | 249 | 48 | 5 | 72 | 319 | 1 | 195 | 1.93e-90 | 268 |
| MS.gene054435.t1 | MTR_1g083480 | 78.616 | 159 | 30 | 2 | 1 | 156 | 1 | 158 | 5.74e-90 | 266 |
| MS.gene054435.t1 | MTR_8g076680 | 49.378 | 241 | 112 | 3 | 1 | 237 | 3 | 237 | 3.57e-81 | 246 |
| MS.gene054435.t1 | MTR_2g090240 | 36.760 | 321 | 189 | 6 | 1 | 318 | 1 | 310 | 1.06e-66 | 212 |
| MS.gene054435.t1 | MTR_4g089060 | 36.760 | 321 | 188 | 6 | 1 | 318 | 1 | 309 | 2.03e-65 | 208 |
| MS.gene054435.t1 | MTR_3g024250 | 86.916 | 107 | 14 | 0 | 46 | 152 | 1 | 107 | 3.39e-65 | 202 |
| MS.gene054435.t1 | MTR_2g090245 | 35.826 | 321 | 192 | 7 | 1 | 318 | 1 | 310 | 6.64e-63 | 202 |
| MS.gene054435.t1 | MTR_4g089040 | 36.137 | 321 | 190 | 6 | 1 | 318 | 1 | 309 | 6.76e-63 | 202 |
| MS.gene054435.t1 | MTR_4g089060 | 34.195 | 348 | 187 | 7 | 1 | 318 | 1 | 336 | 2.77e-60 | 196 |
| MS.gene054435.t1 | MTR_4g089060 | 39.056 | 233 | 133 | 3 | 1 | 231 | 1 | 226 | 8.41e-54 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054435.t1 | AT3G05600 | 60.185 | 324 | 124 | 4 | 1 | 319 | 1 | 324 | 2.43e-147 | 417 |
| MS.gene054435.t1 | AT4G02340 | 57.188 | 320 | 132 | 3 | 1 | 319 | 1 | 316 | 5.99e-138 | 394 |
| MS.gene054435.t1 | AT2G26740 | 61.180 | 322 | 118 | 4 | 4 | 319 | 1 | 321 | 8.06e-130 | 373 |
| MS.gene054435.t1 | AT4G15960 | 52.615 | 325 | 147 | 3 | 1 | 319 | 51 | 374 | 1.36e-124 | 362 |
| MS.gene054435.t1 | AT2G26750 | 58.567 | 321 | 127 | 4 | 4 | 319 | 1 | 320 | 2.51e-124 | 359 |
| MS.gene054435.t1 | AT4G15955 | 50.613 | 326 | 123 | 4 | 5 | 319 | 6 | 304 | 9.91e-110 | 321 |
| MS.gene054435.t1 | AT3G05600 | 61.157 | 242 | 89 | 4 | 1 | 237 | 1 | 242 | 6.76e-108 | 314 |
| MS.gene054435.t1 | AT3G51000 | 48.428 | 318 | 159 | 5 | 4 | 319 | 5 | 319 | 3.98e-103 | 305 |
| MS.gene054435.t1 | AT4G15955 | 60.920 | 174 | 58 | 2 | 5 | 168 | 6 | 179 | 8.75e-72 | 220 |
| MS.gene054435.t1 | AT4G15955 | 61.212 | 165 | 54 | 2 | 5 | 159 | 6 | 170 | 1.26e-67 | 209 |
Find 84 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAAGCTTTGATTCTTTC+AGG | 0.126719 | 7.4:+4107725 | None:intergenic |
| GGCATCAACGGTCCTGATTT+TGG | 0.162298 | 7.4:+4107670 | None:intergenic |
| CCTCTTGTCTTGTTCCTTCA+TGG | 0.187509 | 7.4:-4107995 | MS.gene054435:CDS |
| TTATTACATATGTAGATTTC+AGG | 0.264776 | 7.4:-4107624 | MS.gene054435:intron |
| AAAATGCATATTGCTGAAAA+AGG | 0.266560 | 7.4:-4108028 | MS.gene054435:CDS |
| AACTCTCCCTTGGGAAATAT+TGG | 0.280214 | 7.4:+4106282 | None:intergenic |
| ATATTTCCCAAGGGAGAGTT+TGG | 0.305783 | 7.4:-4106279 | MS.gene054435:CDS |
| CGCCATGAATACCACAGTTC+GGG | 0.324950 | 7.4:+4107968 | None:intergenic |
| CACAGAACAGTGGAAGTAAA+TGG | 0.328559 | 7.4:-4108055 | MS.gene054435:CDS |
| ATTTCTTGTGGCTCATGATT+GGG | 0.336317 | 7.4:-4107783 | MS.gene054435:CDS |
| AGCTGATGGCACCATGGAAT+GGG | 0.338259 | 7.4:-4105783 | MS.gene054435:CDS |
| TATTTCTTGTGGCTCATGAT+TGG | 0.353373 | 7.4:-4107784 | MS.gene054435:CDS |
| GTCTCCAAATTTGAGAAAAC+AGG | 0.355343 | 7.4:-4106186 | MS.gene054435:CDS |
| GATAATCACTTCTTCCAGAT+TGG | 0.362380 | 7.4:+4105651 | None:intergenic |
| CATGATTGGGGTGCCATCAT+TGG | 0.372270 | 7.4:-4107770 | MS.gene054435:CDS |
| GATGCCATGCATGCTGCTTA+TGG | 0.379998 | 7.4:-4107653 | MS.gene054435:CDS |
| ACCCTCACAACTCGGAAAAC+TGG | 0.389484 | 7.4:-4106309 | MS.gene054435:CDS |
| CCCAAGGGAGAGTTTGGAAC+TGG | 0.389949 | 7.4:-4106273 | MS.gene054435:CDS |
| AGCCAAGAGGGTAAGGTGTC+AGG | 0.390169 | 7.4:+4106234 | None:intergenic |
| ATCACAGGAACCAGGCAAAA+TGG | 0.395142 | 7.4:-4106376 | MS.gene054435:intron |
| GCTCCGGATCTCCGTGGTTA+TGG | 0.399328 | 7.4:-4107902 | MS.gene054435:CDS |
| TTACTTGTATTGTAGAAATT+GGG | 0.399713 | 7.4:-4105806 | MS.gene054435:intron |
| TCCCCGAACTGTGGTATTCA+TGG | 0.400391 | 7.4:-4107970 | MS.gene054435:CDS |
| GAAGAAGTGATTATCCAAAA+AGG | 0.403789 | 7.4:-4105643 | MS.gene054435:CDS |
| CTCCTGACACCTTACCCTCT+TGG | 0.407073 | 7.4:-4106236 | MS.gene054435:CDS |
| CATAAGCTTTGATTCTTTCA+GGG | 0.418162 | 7.4:+4107726 | None:intergenic |
| GTGCCTGTGAAATTCATTAC+AGG | 0.432209 | 7.4:-4105748 | MS.gene054435:CDS |
| CAAGGAAGATGTGCCCAATC+TGG | 0.434486 | 7.4:-4105665 | MS.gene054435:CDS |
| TCCGTAGAAACCCCAAAATC+AGG | 0.443771 | 7.4:-4107682 | MS.gene054435:CDS |
| ATAATCACTTCTTCCAGATT+GGG | 0.447163 | 7.4:+4105652 | None:intergenic |
| TCCAGTTCCAAACTCTCCCT+TGG | 0.447351 | 7.4:+4106272 | None:intergenic |
| CGGCTACCGTGCTGTTGCTC+CGG | 0.456232 | 7.4:-4107918 | MS.gene054435:CDS |
| TTCTGTAAGCCAAGAGGGTA+AGG | 0.457253 | 7.4:+4106227 | None:intergenic |
| GAAAATCTATAAGTGCAATA+AGG | 0.461083 | 7.4:+4107822 | None:intergenic |
| GCGCCATGAATACCACAGTT+CGG | 0.461173 | 7.4:+4107967 | None:intergenic |
| GAGCTGATGGCACCATGGAA+TGG | 0.461653 | 7.4:-4105784 | MS.gene054435:CDS |
| TCACCATAACCACGGAGATC+CGG | 0.490155 | 7.4:+4107899 | None:intergenic |
| CCAGTTCCAAACTCTCCCTT+GGG | 0.501905 | 7.4:+4106273 | None:intergenic |
| ACAAAGATACCAACCAATGA+TGG | 0.534758 | 7.4:+4107757 | None:intergenic |
| AGGCAAAATGGAAGCTGAGA+TGG | 0.540634 | 7.4:-4106364 | MS.gene054435:CDS |
| ATGGAATGGGGTGAAAATCA+AGG | 0.540835 | 7.4:-4105770 | MS.gene054435:CDS |
| TTTCTTGTGGCTCATGATTG+GGG | 0.543062 | 7.4:-4107782 | MS.gene054435:CDS |
| TCTCCCTTGGGAAATATTGG+AGG | 0.546141 | 7.4:+4106285 | None:intergenic |
| TTGGGGTTTCTACGGAGTAG+TGG | 0.547389 | 7.4:+4107689 | None:intergenic |
| ATTGTAGCTCTCAGCTCCCT+CGG | 0.548619 | 7.4:-4107938 | MS.gene054435:CDS |
| ATCTCCATAAGCAGCATGCA+TGG | 0.554133 | 7.4:+4107649 | None:intergenic |
| TCTTCTTCTGTAAGCCAAGA+GGG | 0.563661 | 7.4:+4106222 | None:intergenic |
| GAGCAACAGCACGGTAGCCG+AGG | 0.563671 | 7.4:+4107921 | None:intergenic |
| TCACCTGTAATGAATTTCAC+AGG | 0.570947 | 7.4:+4105745 | None:intergenic |
| AGCAACAGCACGGTAGCCGA+GGG | 0.572130 | 7.4:+4107922 | None:intergenic |
| ATTGGGGTGCCATCATTGGT+TGG | 0.574625 | 7.4:-4107766 | MS.gene054435:CDS |
| ACAGTTCGGGGAAGCCATGA+AGG | 0.577839 | 7.4:+4107981 | None:intergenic |
| GAAGGAGTATATCCATGGTG+GGG | 0.578871 | 7.4:-4105692 | MS.gene054435:CDS |
| TGAAGGAGTATATCCATGGT+GGG | 0.583874 | 7.4:-4105693 | MS.gene054435:CDS |
| TGGTCCTCCAATATTTCCCA+AGG | 0.588717 | 7.4:-4106289 | MS.gene054435:CDS |
| GAAGCTGAGATGGCTGAAGT+TGG | 0.590883 | 7.4:-4106354 | MS.gene054435:CDS |
| AGCTGAGAGCTACAATCTGA+TGG | 0.590990 | 7.4:+4107945 | None:intergenic |
| AGCAGCATGCATGGCATCAA+CGG | 0.592010 | 7.4:+4107658 | None:intergenic |
| TGGTCCGCATCACAGGAACC+AGG | 0.594410 | 7.4:-4106384 | MS.gene054435:intron |
| TCTTCAGTTAGTAGCTACAC+AGG | 0.594878 | 7.4:-4107863 | MS.gene054435:CDS |
| AAGGAGTATATCCATGGTGG+GGG | 0.600787 | 7.4:-4105691 | MS.gene054435:CDS |
| TTCATGGCTTCCCCGAACTG+TGG | 0.605850 | 7.4:-4107979 | MS.gene054435:CDS |
| TGTTGATCAAGTATTTCTTG+TGG | 0.608957 | 7.4:-4107795 | MS.gene054435:CDS |
| CAACAATCAAGAAGCAGCAG+AGG | 0.610084 | 7.4:-4105608 | MS.gene054435:CDS |
| ACTAACTGAAGACGGAGCAT+CGG | 0.615174 | 7.4:+4107874 | None:intergenic |
| CCATGAAGGAACAAGACAAG+AGG | 0.618716 | 7.4:+4107995 | None:intergenic |
| TTGTAGAAATTGGGAGCTGA+TGG | 0.619295 | 7.4:-4105797 | MS.gene054435:intron |
| AACATGAAGGAGTATATCCA+TGG | 0.620148 | 7.4:-4105697 | MS.gene054435:CDS |
| ATACTCCTTCATGTTTAGTG+AGG | 0.623538 | 7.4:+4105705 | None:intergenic |
| GCTGATGGCACCATGGAATG+GGG | 0.628565 | 7.4:-4105782 | MS.gene054435:CDS |
| GTTTGGAACTGGATTCAACT+CGG | 0.629425 | 7.4:-4106262 | MS.gene054435:CDS |
| ATTTGGAGACAAAATAAGCA+AGG | 0.634682 | 7.4:+4106199 | None:intergenic |
| ATGAAGGAGTATATCCATGG+TGG | 0.640343 | 7.4:-4105694 | MS.gene054435:CDS |
| TGAAAAGTACCCTCACAACT+CGG | 0.640586 | 7.4:-4106317 | MS.gene054435:CDS |
| ATTGGGAGCTGATGGCACCA+TGG | 0.649732 | 7.4:-4105789 | MS.gene054435:CDS |
| GTCTTCTTCTGTAAGCCAAG+AGG | 0.650739 | 7.4:+4106221 | None:intergenic |
| GTGTAGCTACTAACTGAAGA+CGG | 0.652352 | 7.4:+4107866 | None:intergenic |
| ATACACCTCACTAAACATGA+AGG | 0.662683 | 7.4:-4105710 | MS.gene054435:CDS |
| GGAGATCCGGAGCAACAGCA+CGG | 0.668358 | 7.4:+4107912 | None:intergenic |
| AGGAATAGAACACAGAACAG+TGG | 0.676997 | 7.4:-4108065 | MS.gene054435:CDS |
| GCCATGAATACCACAGTTCG+GGG | 0.692309 | 7.4:+4107969 | None:intergenic |
| GGTCCTCCAATATTTCCCAA+GGG | 0.706108 | 7.4:-4106288 | MS.gene054435:CDS |
| GCTGTTGCTCCGGATCTCCG+TGG | 0.713696 | 7.4:-4107908 | MS.gene054435:CDS |
| CATCGGTGTCACCATAACCA+CGG | 0.714613 | 7.4:+4107891 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATGTTATTTTATTTTGT+AGG | - | chr7.4:4106345-4106364 | MS.gene054435:CDS | 10.0% |
| !!! | AAATGTTATTTTATTTTGTA+GGG | - | chr7.4:4106346-4106365 | MS.gene054435:CDS | 10.0% |
| !! | AATACTTAATAACTAAATTC+AGG | - | chr7.4:4106435-4106454 | MS.gene054435:intron | 15.0% |
| !! | ATACTTAATAACTAAATTCA+GGG | - | chr7.4:4106436-4106455 | MS.gene054435:intron | 15.0% |
| !! | ATTGTTTAATATAATTAAGG+AGG | - | chr7.4:4106565-4106584 | MS.gene054435:intron | 15.0% |
| !! | CAAAATTCTAAATATTTAGA+TGG | + | chr7.4:4106157-4106176 | None:intergenic | 15.0% |
| !! | GAGATTGTTTAATATAATTA+AGG | - | chr7.4:4106562-4106581 | MS.gene054435:intron | 15.0% |
| !! | TTATGAGTCATAAAATATTA+GGG | + | chr7.4:4106106-4106125 | None:intergenic | 15.0% |
| !! | TTTATGAGTCATAAAATATT+AGG | + | chr7.4:4106107-4106126 | None:intergenic | 15.0% |
| !! | AAACTTAATTATATAGATGC+AGG | - | chr7.4:4106405-4106424 | MS.gene054435:intron | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr7.4:4106376-4106395 | MS.gene054435:intron | 20.0% |
| !! | ATTACTTGTATTGTAGAAAT+TGG | - | chr7.4:4107830-4107849 | MS.gene054435:CDS | 20.0% |
| !! | ATTGATTATTGAATACGTTA+GGG | - | chr7.4:4106988-4107007 | MS.gene054435:intron | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr7.4:4106377-4106396 | MS.gene054435:intron | 20.0% |
| !! | TATGACTCATAAAATATACA+GGG | - | chr7.4:4106114-4106133 | MS.gene054435:intron | 20.0% |
| !! | TCTGTTTCAAAACATTATAT+TGG | + | chr7.4:4107165-4107184 | None:intergenic | 20.0% |
| !! | TTACTTGTATTGTAGAAATT+GGG | - | chr7.4:4107831-4107850 | MS.gene054435:CDS | 20.0% |
| !! | TTATGACTCATAAAATATAC+AGG | - | chr7.4:4106113-4106132 | MS.gene054435:intron | 20.0% |
| !! | TTATTACATATGTAGATTTC+AGG | - | chr7.4:4106013-4106032 | MS.gene054435:intron | 20.0% |
| !!! | AAAATATCCATCAACATTTT+TGG | - | chr7.4:4106285-4106304 | MS.gene054435:CDS | 20.0% |
| !!! | ACCAATAACAGTTTTAAAAA+TGG | + | chr7.4:4107706-4107725 | None:intergenic | 20.0% |
| !!! | ATGTTGATGGAAAATTTTAT+AGG | + | chr7.4:4106218-4106237 | None:intergenic | 20.0% |
| !!! | TATATGTTGACAATTCTTTT+TGG | - | chr7.4:4107558-4107577 | MS.gene054435:intron | 20.0% |
| !!! | TATTGATTATTGAATACGTT+AGG | - | chr7.4:4106987-4107006 | MS.gene054435:intron | 20.0% |
| !!! | TCCATTTTTAAAACTGTTAT+TGG | - | chr7.4:4107702-4107721 | MS.gene054435:CDS | 20.0% |
| !!! | TGTTGATGGAAAATTTTATA+GGG | + | chr7.4:4106217-4106236 | None:intergenic | 20.0% |
| !!! | TGTTGATGGAAAATTTTTAT+AGG | + | chr7.4:4106249-4106268 | None:intergenic | 20.0% |
| !!! | TTTGTTTATCTAAAATGAAG+TGG | - | chr7.4:4107189-4107208 | MS.gene054435:intron | 20.0% |
| ! | AAAATGCATATTGCTGAAAA+AGG | - | chr7.4:4105609-4105628 | MS.gene054435:CDS | 25.0% |
| ! | AATGCATCTTTCATTAGAAT+TGG | + | chr7.4:4107810-4107829 | None:intergenic | 25.0% |
| ! | ACAATGACTAAAAATGTTGA+TGG | + | chr7.4:4106263-4106282 | None:intergenic | 25.0% |
| ! | AGAATTGTATGACATCATAA+TGG | - | chr7.4:4107045-4107064 | MS.gene054435:intron | 25.0% |
| ! | ATAGGAACTAAAAATGTTGA+TGG | + | chr7.4:4106231-4106250 | None:intergenic | 25.0% |
| ! | ATGATATGTAGCTAAAAGAA+AGG | + | chr7.4:4107098-4107117 | None:intergenic | 25.0% |
| ! | ATGCATCTTTCATTAGAATT+GGG | + | chr7.4:4107809-4107828 | None:intergenic | 25.0% |
| ! | ATTTATTTGAGAGGATTTAC+GGG | - | chr7.4:4106535-4106554 | MS.gene054435:intron | 25.0% |
| ! | GAAAATCTATAAGTGCAATA+AGG | + | chr7.4:4105818-4105837 | None:intergenic | 25.0% |
| ! | GAATTGTCAACATATATTTG+TGG | + | chr7.4:4107554-4107573 | None:intergenic | 25.0% |
| ! | GATTGCTTAAAGTAAATTAG+GGG | + | chr7.4:4106084-4106103 | None:intergenic | 25.0% |
| ! | GATTTATTTGAGAGGATTTA+CGG | - | chr7.4:4106534-4106553 | MS.gene054435:intron | 25.0% |
| ! | GGATTGCTTAAAGTAAATTA+GGG | + | chr7.4:4106085-4106104 | None:intergenic | 25.0% |
| ! | TACAGGGTTAATTAAGTAAA+TGG | - | chr7.4:4106130-4106149 | MS.gene054435:intron | 25.0% |
| ! | TCAAATAAATCTATCCAAAC+AGG | + | chr7.4:4106525-4106544 | None:intergenic | 25.0% |
| ! | TTGAATATAACAACATGTGT+CGG | + | chr7.4:4107677-4107696 | None:intergenic | 25.0% |
| ! | TTTGGATAGATTTATTTGAG+AGG | - | chr7.4:4106526-4106545 | MS.gene054435:intron | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr7.4:4106313-4106332 | None:intergenic | 25.0% |
| !! | ATTGCACTTATAGATTTTCT+GGG | - | chr7.4:4105819-4105838 | MS.gene054435:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr7.4:4106312-4106331 | None:intergenic | 25.0% |
| !! | CTGAATAACATAATTGCTTT+TGG | - | chr7.4:4107233-4107252 | MS.gene054435:intron | 25.0% |
| !! | TATTGCACTTATAGATTTTC+TGG | - | chr7.4:4105818-4105837 | MS.gene054435:intron | 25.0% |
| !!! | CTTAAAAAAGCACTTGATTA+AGG | - | chr7.4:4106707-4106726 | MS.gene054435:intron | 25.0% |
| !!! | CTTAATCAAGTGCTTTTTTA+AGG | + | chr7.4:4106709-4106728 | None:intergenic | 25.0% |
| !!! | TCTTATGATTTTAGTTTGAG+TGG | - | chr7.4:4106464-4106483 | MS.gene054435:intron | 25.0% |
| !!! | TTGATTTTTTGTGTTATCTC+TGG | - | chr7.4:4107521-4107540 | MS.gene054435:intron | 25.0% |
| AATCAAAAGAGGAAACCTTA+TGG | - | chr7.4:4106887-4106906 | MS.gene054435:intron | 30.0% | |
| AATCAAGTGTTAAATCCACT+TGG | + | chr7.4:4106842-4106861 | None:intergenic | 30.0% | |
| AGTAGAGTCTAAATCAAAAG+AGG | - | chr7.4:4106876-4106895 | MS.gene054435:intron | 30.0% | |
| ATAATCACTTCTTCCAGATT+GGG | + | chr7.4:4107988-4108007 | None:intergenic | 30.0% | |
| ATCAAGTGTTAAATCCACTT+GGG | + | chr7.4:4106841-4106860 | None:intergenic | 30.0% | |
| ATTGCTGAAAAAGGAAAAGA+AGG | - | chr7.4:4105618-4105637 | MS.gene054435:CDS | 30.0% | |
| ATTTGGAGACAAAATAAGCA+AGG | + | chr7.4:4107441-4107460 | None:intergenic | 30.0% | |
| CAACATGACAATAATCTATG+CGG | - | chr7.4:4107594-4107613 | MS.gene054435:intron | 30.0% | |
| GAAGAAGTGATTATCCAAAA+AGG | - | chr7.4:4107994-4108013 | MS.gene054435:CDS | 30.0% | |
| GAATTAACTGATCAACCATA+AGG | + | chr7.4:4106905-4106924 | None:intergenic | 30.0% | |
| GGGATTGCTTAAAGTAAATT+AGG | + | chr7.4:4106086-4106105 | None:intergenic | 30.0% | |
| TGTTGATCAAGTATTTCTTG+TGG | - | chr7.4:4105842-4105861 | MS.gene054435:intron | 30.0% | |
| ! | ACATAAGCTTTGATTCTTTC+AGG | + | chr7.4:4105915-4105934 | None:intergenic | 30.0% |
| ! | ACATGTTGTGCATTTTGTTA+GGG | - | chr7.4:4106959-4106978 | MS.gene054435:intron | 30.0% |
| ! | CATAAGCTTTGATTCTTTCA+GGG | + | chr7.4:4105914-4105933 | None:intergenic | 30.0% |
| ! | TACACAGGTTTTCATATAGT+AGG | - | chr7.4:4105789-4105808 | MS.gene054435:CDS | 30.0% |
| ACAAAGATACCAACCAATGA+TGG | + | chr7.4:4105883-4105902 | None:intergenic | 35.0% | |
| ACAACGCTAAACACAAACAT+TGG | + | chr7.4:4107750-4107769 | None:intergenic | 35.0% | |
| AGTGATTATCCAAAAAGGAG+TGG | - | chr7.4:4107999-4108018 | MS.gene054435:CDS | 35.0% | |
| ATACACCTCACTAAACATGA+AGG | - | chr7.4:4107927-4107946 | MS.gene054435:CDS | 35.0% | |
| ATACTCCTTCATGTTTAGTG+AGG | + | chr7.4:4107935-4107954 | None:intergenic | 35.0% | |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr7.4:4106316-4106335 | MS.gene054435:CDS | 35.0% | |
| ATTTCTTGTGGCTCATGATT+GGG | - | chr7.4:4105854-4105873 | MS.gene054435:intron | 35.0% | |
| CAGAGACAAAAGTAGAAAAG+TGG | + | chr7.4:4106058-4106077 | None:intergenic | 35.0% | |
| GATAATCACTTCTTCCAGAT+TGG | + | chr7.4:4107989-4108008 | None:intergenic | 35.0% | |
| GTCTCCAAATTTGAGAAAAC+AGG | - | chr7.4:4107451-4107470 | MS.gene054435:intron | 35.0% | |
| TATTTCTTGTGGCTCATGAT+TGG | - | chr7.4:4105853-4105872 | MS.gene054435:intron | 35.0% | |
| TCACCTGTAATGAATTTCAC+AGG | + | chr7.4:4107895-4107914 | None:intergenic | 35.0% | |
| TCTGAGTAGGGTAATACTTT+AGG | + | chr7.4:4107122-4107141 | None:intergenic | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | - | chr7.4:4106317-4106336 | MS.gene054435:CDS | 35.0% | |
| TTAGGGACCAAAAATGTTGA+TGG | + | chr7.4:4106295-4106314 | None:intergenic | 35.0% | |
| TTTGGTCCCTAAAATGCTTA+AGG | - | chr7.4:4106303-4106322 | MS.gene054435:CDS | 35.0% | |
| ! | AACATGAAGGAGTATATCCA+TGG | - | chr7.4:4107940-4107959 | MS.gene054435:CDS | 35.0% |
| ! | GAAGCCTGTTTTCTCAAATT+TGG | + | chr7.4:4107458-4107477 | None:intergenic | 35.0% |
| ! | GACATGTTGTGCATTTTGTT+AGG | - | chr7.4:4106958-4106977 | MS.gene054435:intron | 35.0% |
| !! | AGGGTGAAGTTCTCTTATTT+TGG | - | chr7.4:4107007-4107026 | MS.gene054435:intron | 35.0% |
| !!! | GGGTGAAGTTCTCTTATTTT+GGG | - | chr7.4:4107008-4107027 | MS.gene054435:intron | 35.0% |
| AACTCTCCCTTGGGAAATAT+TGG | + | chr7.4:4107358-4107377 | None:intergenic | 40.0% | |
| AGGAATAGAACACAGAACAG+TGG | - | chr7.4:4105572-4105591 | MS.gene054435:CDS | 40.0% | |
| AGTATCTCTCTTAAGGTGAC+AGG | + | chr7.4:4106789-4106808 | None:intergenic | 40.0% | |
| AGTGTTAAATCCACTTGGGA+TGG | + | chr7.4:4106837-4106856 | None:intergenic | 40.0% | |
| AGTTTGAGTGGTGTTTGATG+TGG | - | chr7.4:4106476-4106495 | MS.gene054435:intron | 40.0% | |
| ATATTTCCCAAGGGAGAGTT+TGG | - | chr7.4:4107358-4107377 | MS.gene054435:intron | 40.0% | |
| ATGATACTGATACGCCTGTT+TGG | - | chr7.4:4106508-4106527 | MS.gene054435:intron | 40.0% | |
| ATGGAATGGGGTGAAAATCA+AGG | - | chr7.4:4107867-4107886 | MS.gene054435:CDS | 40.0% | |
| CACAGAACAGTGGAAGTAAA+TGG | - | chr7.4:4105582-4105601 | MS.gene054435:CDS | 40.0% | |
| GAGACGATTCAATCTGAGTA+GGG | + | chr7.4:4107134-4107153 | None:intergenic | 40.0% | |
| GTGCCTGTGAAATTCATTAC+AGG | - | chr7.4:4107889-4107908 | MS.gene054435:CDS | 40.0% | |
| GTGTAGCTACTAACTGAAGA+CGG | + | chr7.4:4105774-4105793 | None:intergenic | 40.0% | |
| GTTTGAGTGGTGTTTGATGT+GGG | - | chr7.4:4106477-4106496 | MS.gene054435:intron | 40.0% | |
| TATCAACGCGTATCAAACAC+CGG | + | chr7.4:4107647-4107666 | None:intergenic | 40.0% | |
| TCGATCTATCCCACTGAAAT+TGG | - | chr7.4:4106747-4106766 | MS.gene054435:intron | 40.0% | |
| TCTTCAGTTAGTAGCTACAC+AGG | - | chr7.4:4105774-4105793 | MS.gene054435:CDS | 40.0% | |
| TCTTCTTCTGTAAGCCAAGA+GGG | + | chr7.4:4107418-4107437 | None:intergenic | 40.0% | |
| TTGTAGAAATTGGGAGCTGA+TGG | - | chr7.4:4107840-4107859 | MS.gene054435:CDS | 40.0% | |
| TTTCTTGTGGCTCATGATTG+GGG | - | chr7.4:4105855-4105874 | MS.gene054435:intron | 40.0% | |
| ! | AGACTGGAGTATCTCTCTTA+AGG | + | chr7.4:4106796-4106815 | None:intergenic | 40.0% |
| ! | ATAACAACATGTGTCGGTGT+CGG | + | chr7.4:4107671-4107690 | None:intergenic | 40.0% |
| ! | ATGAAGGAGTATATCCATGG+TGG | - | chr7.4:4107943-4107962 | MS.gene054435:CDS | 40.0% |
| ! | GTTTGGAACTGGATTCAACT+CGG | - | chr7.4:4107375-4107394 | MS.gene054435:intron | 40.0% |
| ! | TGAAGGAGTATATCCATGGT+GGG | - | chr7.4:4107944-4107963 | MS.gene054435:CDS | 40.0% |
| ! | TTGATTTTCACCCCATTCCA+TGG | + | chr7.4:4107868-4107887 | None:intergenic | 40.0% |
| !! | TGAAAAGTACCCTCACAACT+CGG | - | chr7.4:4107320-4107339 | MS.gene054435:intron | 40.0% |
| !!! | TCCTGATTTTGGGGTTTCTA+CGG | + | chr7.4:4105959-4105978 | None:intergenic | 40.0% |
| ACTAACTGAAGACGGAGCAT+CGG | + | chr7.4:4105766-4105785 | None:intergenic | 45.0% | |
| AGCTGAGAGCTACAATCTGA+TGG | + | chr7.4:4105695-4105714 | None:intergenic | 45.0% | |
| AGGCAAAATGGAAGCTGAGA+TGG | - | chr7.4:4107273-4107292 | MS.gene054435:intron | 45.0% | |
| ATCAACGCGTATCAAACACC+GGG | + | chr7.4:4107646-4107665 | None:intergenic | 45.0% | |
| ATCACAGGAACCAGGCAAAA+TGG | - | chr7.4:4107261-4107280 | MS.gene054435:intron | 45.0% | |
| ATCCCACTGAAATTGGCACA+GGG | - | chr7.4:4106754-4106773 | MS.gene054435:intron | 45.0% | |
| ATCTCCATAAGCAGCATGCA+TGG | + | chr7.4:4105991-4106010 | None:intergenic | 45.0% | |
| CAACAATCAAGAAGCAGCAG+AGG | - | chr7.4:4108029-4108048 | MS.gene054435:CDS | 45.0% | |
| CCATGAAGGAACAAGACAAG+AGG | + | chr7.4:4105645-4105664 | None:intergenic | 45.0% | |
| CGAGACGATTCAATCTGAGT+AGG | + | chr7.4:4107135-4107154 | None:intergenic | 45.0% | |
| GGTCCTCCAATATTTCCCAA+GGG | - | chr7.4:4107349-4107368 | MS.gene054435:intron | 45.0% | |
| GTCTTCTTCTGTAAGCCAAG+AGG | + | chr7.4:4107419-4107438 | None:intergenic | 45.0% | |
| TATCCCACTGAAATTGGCAC+AGG | - | chr7.4:4106753-4106772 | MS.gene054435:intron | 45.0% | |
| TCCGTAGAAACCCCAAAATC+AGG | - | chr7.4:4105955-4105974 | MS.gene054435:intron | 45.0% | |
| TCTCCCTTGGGAAATATTGG+AGG | + | chr7.4:4107355-4107374 | None:intergenic | 45.0% | |
| TGGTCCTCCAATATTTCCCA+AGG | - | chr7.4:4107348-4107367 | MS.gene054435:intron | 45.0% | |
| TTCCCTGTGCCAATTTCAGT+GGG | + | chr7.4:4106759-4106778 | None:intergenic | 45.0% | |
| TTCTGTAAGCCAAGAGGGTA+AGG | + | chr7.4:4107413-4107432 | None:intergenic | 45.0% | |
| TTTCAGTTTGAAGACGTGCC+CGG | - | chr7.4:4107625-4107644 | MS.gene054435:CDS | 45.0% | |
| TTTCCCTGTGCCAATTTCAG+TGG | + | chr7.4:4106760-4106779 | None:intergenic | 45.0% | |
| ! | AAGGAGTATATCCATGGTGG+GGG | - | chr7.4:4107946-4107965 | MS.gene054435:CDS | 45.0% |
| ! | ACCAGTTTTCCGAGTTGTGA+GGG | + | chr7.4:4107332-4107351 | None:intergenic | 45.0% |
| ! | ATCTCAGCTTCCATTTTGCC+TGG | + | chr7.4:4107274-4107293 | None:intergenic | 45.0% |
| ! | CATCAACGGTCCTGATTTTG+GGG | + | chr7.4:4105968-4105987 | None:intergenic | 45.0% |
| ! | CCTCTTGTCTTGTTCCTTCA+TGG | - | chr7.4:4105642-4105661 | MS.gene054435:CDS | 45.0% |
| ! | GAAGGAGTATATCCATGGTG+GGG | - | chr7.4:4107945-4107964 | MS.gene054435:CDS | 45.0% |
| ! | GCATCAACGGTCCTGATTTT+GGG | + | chr7.4:4105969-4105988 | None:intergenic | 45.0% |
| !!! | AAAATATGATTTTATTTTAT+AGG | + | chr7.4:4106189-4106208 | None:intergenic | 5.0% |
| !!! | AAATATGATTTTATTTTATA+GGG | + | chr7.4:4106188-4106207 | None:intergenic | 5.0% |
| ACCCTCACAACTCGGAAAAC+TGG | - | chr7.4:4107328-4107347 | MS.gene054435:intron | 50.0% | |
| AGCAGCATGCATGGCATCAA+CGG | + | chr7.4:4105982-4106001 | None:intergenic | 50.0% | |
| AGCTGATGGCACCATGGAAT+GGG | - | chr7.4:4107854-4107873 | MS.gene054435:CDS | 50.0% | |
| ATTGTAGCTCTCAGCTCCCT+CGG | - | chr7.4:4105699-4105718 | MS.gene054435:CDS | 50.0% | |
| CAAGGAAGATGTGCCCAATC+TGG | - | chr7.4:4107972-4107991 | MS.gene054435:CDS | 50.0% | |
| CCAGTTCCAAACTCTCCCTT+GGG | + | chr7.4:4107367-4107386 | None:intergenic | 50.0% | |
| CGCCATGAATACCACAGTTC+GGG | + | chr7.4:4105672-4105691 | None:intergenic | 50.0% | |
| GAAGCTGAGATGGCTGAAGT+TGG | - | chr7.4:4107283-4107302 | MS.gene054435:intron | 50.0% | |
| GCCATGAATACCACAGTTCG+GGG | + | chr7.4:4105671-4105690 | None:intergenic | 50.0% | |
| GCGCCATGAATACCACAGTT+CGG | + | chr7.4:4105673-4105692 | None:intergenic | 50.0% | |
| TAAATCCACTTGGGATGGCC+TGG | + | chr7.4:4106832-4106851 | None:intergenic | 50.0% | |
| TCACCATAACCACGGAGATC+CGG | + | chr7.4:4105741-4105760 | None:intergenic | 50.0% | |
| TCCAGTTCCAAACTCTCCCT+TGG | + | chr7.4:4107368-4107387 | None:intergenic | 50.0% | |
| TCCCCGAACTGTGGTATTCA+TGG | - | chr7.4:4105667-4105686 | MS.gene054435:CDS | 50.0% | |
| TTGGGGTTTCTACGGAGTAG+TGG | + | chr7.4:4105951-4105970 | None:intergenic | 50.0% | |
| TTTGCCTGGTTCCTGTGATG+CGG | + | chr7.4:4107260-4107279 | None:intergenic | 50.0% | |
| ! | ATTGGGGTGCCATCATTGGT+TGG | - | chr7.4:4105871-4105890 | MS.gene054435:intron | 50.0% |
| ! | CATGATTGGGGTGCCATCAT+TGG | - | chr7.4:4105867-4105886 | MS.gene054435:intron | 50.0% |
| ! | GACCAGTTTTCCGAGTTGTG+AGG | + | chr7.4:4107333-4107352 | None:intergenic | 50.0% |
| ! | GATGCCATGCATGCTGCTTA+TGG | - | chr7.4:4105984-4106003 | MS.gene054435:intron | 50.0% |
| ! | GGCATCAACGGTCCTGATTT+TGG | + | chr7.4:4105970-4105989 | None:intergenic | 50.0% |
| ! | TATCCATGGTGGGGGATTCA+AGG | - | chr7.4:4107954-4107973 | MS.gene054435:CDS | 50.0% |
| ! | TGAAGTGCGCCACTCCTTTT+TGG | + | chr7.4:4108011-4108030 | None:intergenic | 50.0% |
| !! | CATCGGTGTCACCATAACCA+CGG | + | chr7.4:4105749-4105768 | None:intergenic | 50.0% |
| !! | TTGCTTTTGGTCCGCATCAC+AGG | - | chr7.4:4107246-4107265 | MS.gene054435:intron | 50.0% |
| ACAGTTCGGGGAAGCCATGA+AGG | + | chr7.4:4105659-4105678 | None:intergenic | 55.0% | |
| AGTCTCAAGACACCACCACC+AGG | - | chr7.4:4106811-4106830 | MS.gene054435:intron | 55.0% | |
| ATTGGGAGCTGATGGCACCA+TGG | - | chr7.4:4107848-4107867 | MS.gene054435:CDS | 55.0% | |
| CTCCTGACACCTTACCCTCT+TGG | - | chr7.4:4107401-4107420 | MS.gene054435:intron | 55.0% | |
| CTTCCTTGAATCCCCCACCA+TGG | + | chr7.4:4107960-4107979 | None:intergenic | 55.0% | |
| GAGCTGATGGCACCATGGAA+TGG | - | chr7.4:4107853-4107872 | MS.gene054435:CDS | 55.0% | |
| GCTGATGGCACCATGGAATG+GGG | - | chr7.4:4107855-4107874 | MS.gene054435:CDS | 55.0% | |
| TTCATGGCTTCCCCGAACTG+TGG | - | chr7.4:4105658-4105677 | MS.gene054435:CDS | 55.0% | |
| ! | AGCCAAGAGGGTAAGGTGTC+AGG | + | chr7.4:4107406-4107425 | None:intergenic | 55.0% |
| ! | CCCAAGGGAGAGTTTGGAAC+TGG | - | chr7.4:4107364-4107383 | MS.gene054435:intron | 55.0% |
| !! | TGGTGGTGGTGTCTTGAGAC+TGG | + | chr7.4:4106812-4106831 | None:intergenic | 55.0% |
| AGCAACAGCACGGTAGCCGA+GGG | + | chr7.4:4105718-4105737 | None:intergenic | 60.0% | |
| ATCCACTTGGGATGGCCTGG+TGG | + | chr7.4:4106829-4106848 | None:intergenic | 60.0% | |
| GCTCCGGATCTCCGTGGTTA+TGG | - | chr7.4:4105735-4105754 | MS.gene054435:CDS | 60.0% | |
| GGAGATCCGGAGCAACAGCA+CGG | + | chr7.4:4105728-4105747 | None:intergenic | 60.0% | |
| TGGTCCGCATCACAGGAACC+AGG | - | chr7.4:4107253-4107272 | MS.gene054435:intron | 60.0% | |
| CACCACCAGGCCATCCCAAG+TGG | - | chr7.4:4106824-4106843 | MS.gene054435:intron | 65.0% | |
| CACTTGGGATGGCCTGGTGG+TGG | + | chr7.4:4106826-4106845 | None:intergenic | 65.0% | |
| GAGCAACAGCACGGTAGCCG+AGG | + | chr7.4:4105719-4105738 | None:intergenic | 65.0% | |
| GCTGTTGCTCCGGATCTCCG+TGG | - | chr7.4:4105729-4105748 | MS.gene054435:CDS | 65.0% | |
| ! | CGGCTACCGTGCTGTTGCTC+CGG | - | chr7.4:4105719-4105738 | MS.gene054435:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 4105567 | 4108092 | 4105567 | ID=MS.gene054435 |
| chr7.4 | mRNA | 4105567 | 4108092 | 4105567 | ID=MS.gene054435.t1;Parent=MS.gene054435 |
| chr7.4 | exon | 4107625 | 4108092 | 4107625 | ID=MS.gene054435.t1.exon1;Parent=MS.gene054435.t1 |
| chr7.4 | CDS | 4107625 | 4108092 | 4107625 | ID=cds.MS.gene054435.t1;Parent=MS.gene054435.t1 |
| chr7.4 | exon | 4106147 | 4106391 | 4106147 | ID=MS.gene054435.t1.exon2;Parent=MS.gene054435.t1 |
| chr7.4 | CDS | 4106147 | 4106391 | 4106147 | ID=cds.MS.gene054435.t1;Parent=MS.gene054435.t1 |
| chr7.4 | exon | 4105567 | 4105813 | 4105567 | ID=MS.gene054435.t1.exon3;Parent=MS.gene054435.t1 |
| chr7.4 | CDS | 4105567 | 4105813 | 4105567 | ID=cds.MS.gene054435.t1;Parent=MS.gene054435.t1 |
| Gene Sequence |
| Protein sequence |
