Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99288.t1 | XP_003614096.1 | 94.3 | 404 | 16 | 3 | 1 | 404 | 1 | 397 | 2.40E-206 | 728 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99288.t1 | Q9ZPR7 | 76.0 | 404 | 83 | 4 | 1 | 404 | 1 | 390 | 4.4e-169 | 595.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99288.t1 | G7JY00 | 94.3 | 404 | 16 | 3 | 1 | 404 | 1 | 397 | 1.7e-206 | 728.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054684 | MS.gene99288 | 0.808999 | 2.35E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99288.t1 | MTR_5g044710 | 94.307 | 404 | 16 | 3 | 1 | 404 | 1 | 397 | 0.0 | 734 |
| MS.gene99288.t1 | MTR_5g045530 | 87.901 | 405 | 44 | 3 | 1 | 404 | 1 | 401 | 0.0 | 667 |
| MS.gene99288.t1 | MTR_5g045520 | 81.081 | 407 | 68 | 3 | 1 | 404 | 27 | 427 | 0.0 | 641 |
| MS.gene99288.t1 | MTR_5g045520 | 81.081 | 407 | 68 | 3 | 1 | 404 | 1 | 401 | 0.0 | 641 |
| MS.gene99288.t1 | MTR_5g044710 | 93.617 | 329 | 14 | 3 | 76 | 404 | 2 | 323 | 0.0 | 581 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99288.t1 | AT2G03530 | 75.921 | 407 | 86 | 4 | 1 | 404 | 1 | 398 | 0.0 | 602 |
| MS.gene99288.t1 | AT2G03530 | 75.921 | 407 | 86 | 4 | 1 | 404 | 1 | 398 | 0.0 | 602 |
| MS.gene99288.t1 | AT2G03590 | 75.495 | 404 | 85 | 3 | 1 | 404 | 1 | 390 | 0.0 | 598 |
| MS.gene99288.t1 | AT2G03590 | 75.495 | 404 | 85 | 3 | 1 | 404 | 1 | 390 | 0.0 | 598 |
| MS.gene99288.t1 | AT2G03530 | 75.584 | 385 | 82 | 4 | 1 | 382 | 1 | 376 | 0.0 | 569 |
| MS.gene99288.t1 | AT2G03520 | 68.550 | 407 | 119 | 3 | 1 | 404 | 1 | 401 | 0.0 | 538 |
| MS.gene99288.t1 | AT1G26440 | 67.073 | 410 | 120 | 5 | 1 | 404 | 9 | 409 | 0.0 | 520 |
| MS.gene99288.t1 | AT1G26440 | 67.073 | 410 | 120 | 5 | 1 | 404 | 9 | 409 | 0.0 | 520 |
| MS.gene99288.t1 | AT1G26440 | 61.125 | 409 | 110 | 4 | 1 | 404 | 9 | 373 | 1.95e-163 | 464 |
| MS.gene99288.t1 | AT2G03530 | 74.845 | 322 | 72 | 3 | 83 | 404 | 1 | 313 | 5.69e-163 | 460 |
| MS.gene99288.t1 | AT2G03530 | 74.845 | 322 | 72 | 3 | 83 | 404 | 1 | 313 | 5.69e-163 | 460 |
| MS.gene99288.t1 | AT1G26440 | 60.976 | 410 | 110 | 5 | 1 | 404 | 9 | 374 | 3.66e-162 | 461 |
| MS.gene99288.t1 | AT1G26440 | 66.970 | 330 | 99 | 3 | 76 | 404 | 16 | 336 | 8.99e-150 | 428 |
| MS.gene99288.t1 | AT1G26440 | 66.970 | 330 | 99 | 3 | 76 | 404 | 16 | 336 | 8.99e-150 | 428 |
| MS.gene99288.t1 | AT2G03600 | 62.139 | 346 | 104 | 6 | 1 | 340 | 1 | 325 | 5.72e-146 | 418 |
| MS.gene99288.t1 | AT2G03600 | 60.819 | 342 | 107 | 5 | 1 | 340 | 1 | 317 | 5.12e-141 | 405 |
| MS.gene99288.t1 | AT1G26440 | 55.556 | 405 | 113 | 5 | 1 | 404 | 9 | 347 | 1.17e-135 | 392 |
| MS.gene99288.t1 | AT2G03600 | 68.248 | 274 | 69 | 3 | 1 | 274 | 1 | 256 | 3.47e-131 | 377 |
| MS.gene99288.t1 | AT2G03600 | 68.248 | 274 | 69 | 3 | 1 | 274 | 1 | 256 | 3.47e-131 | 377 |
| MS.gene99288.t1 | AT1G26440 | 59.394 | 330 | 89 | 3 | 76 | 404 | 16 | 301 | 6.91e-127 | 368 |
| MS.gene99288.t1 | AT2G03600 | 63.946 | 294 | 65 | 5 | 1 | 271 | 1 | 276 | 2.40e-125 | 363 |
| MS.gene99288.t1 | AT2G03600 | 65.104 | 192 | 49 | 4 | 83 | 274 | 1 | 174 | 2.87e-77 | 237 |
Find 97 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACTTGTGAGCACTTTC+TGG | 0.038144 | 5.4:+34148396 | MS.gene99288:CDS |
| GTCATCATTGAAAGCTTATT+TGG | 0.096170 | 5.4:+34148096 | MS.gene99288:CDS |
| TGGGAATGGCCTTCAATTTA+TGG | 0.139096 | 5.4:+34148171 | MS.gene99288:CDS |
| GCTGGTCTCCTTTGTGGATT+TGG | 0.175727 | 5.4:+34148151 | MS.gene99288:CDS |
| GCTGGTTTCCTTGTTGTTCT+TGG | 0.192853 | 5.4:+34144430 | MS.gene99288:CDS |
| CTGGTTTCCTTGTTGTTCTT+GGG | 0.222511 | 5.4:+34144431 | MS.gene99288:CDS |
| GGAATAACGACTTGCCTTAA+TGG | 0.234335 | 5.4:-34147562 | None:intergenic |
| CTGGTCTCCTTTGTGGATTT+GGG | 0.268069 | 5.4:+34148152 | MS.gene99288:CDS |
| GTTATCATTGCTTTCACCTT+TGG | 0.272469 | 5.4:+34144548 | MS.gene99288:CDS |
| GCTTTCACCTTTGGTCAAAT+AGG | 0.278938 | 5.4:+34144557 | MS.gene99288:CDS |
| GCAGTGCTCATGGCATCATC+TGG | 0.290022 | 5.4:+34148509 | MS.gene99288:CDS |
| GCCAGCTGTGATGACTTTAT+TGG | 0.290683 | 5.4:+34144460 | MS.gene99288:CDS |
| ATTCTCACCAGCATTCAATT+TGG | 0.294819 | 5.4:+34147925 | MS.gene99288:CDS |
| ATCTAATACTGCTGACAATA+AGG | 0.305103 | 5.4:+34146829 | MS.gene99288:CDS |
| TGAAAGCTTATTTGGGAGAT+TGG | 0.323288 | 5.4:+34148104 | MS.gene99288:CDS |
| TTAGCAATAACTTTCTTTGC+AGG | 0.325081 | 5.4:+34147887 | MS.gene99288:CDS |
| TCCACTTGTGAGCACTTTCT+GGG | 0.325696 | 5.4:+34148397 | MS.gene99288:CDS |
| CCTTGTTGTTCTTGGGGACA+TGG | 0.348148 | 5.4:+34144438 | MS.gene99288:CDS |
| CTCCTTTGTGGATTTGGGAA+TGG | 0.350731 | 5.4:+34148157 | MS.gene99288:CDS |
| GGGAATGGCCTTCAATTTAT+GGG | 0.353628 | 5.4:+34148172 | MS.gene99288:CDS |
| CAGTGGGACACTTTAGATAA+AGG | 0.354076 | 5.4:+34147959 | MS.gene99288:CDS |
| TTCTATTTGCCATGGCTGGT+GGG | 0.356762 | 5.4:+34146488 | MS.gene99288:CDS |
| AAATACTGCAGTTCCTGCTT+TGG | 0.358972 | 5.4:-34147514 | None:intergenic |
| TTGTTGGCTGGTCTCCTTTG+TGG | 0.367617 | 5.4:+34148145 | MS.gene99288:CDS |
| CCTGCTTTGGCTTTGTATGC+AGG | 0.367985 | 5.4:-34147501 | None:intergenic |
| GGAAACCAGCATGCATACTA+TGG | 0.384971 | 5.4:-34144417 | None:intergenic |
| GAAAGCTGAGACAAGAAGTT+AGG | 0.386639 | 5.4:-34144590 | None:intergenic |
| GGCAGTGTAAACACTCAAAT+GGG | 0.391996 | 5.4:-34147987 | None:intergenic |
| TAAAACCATTTGCAGGTGTT+TGG | 0.403739 | 5.4:+34147845 | MS.gene99288:intron |
| AGTGGGACACTTTAGATAAA+GGG | 0.405109 | 5.4:+34147960 | MS.gene99288:CDS |
| CTTCTTGTCTCAGCTTTCTC+AGG | 0.405118 | 5.4:+34144595 | MS.gene99288:CDS |
| TCATCATTGAAAGCTTATTT+GGG | 0.405813 | 5.4:+34148097 | MS.gene99288:CDS |
| TCTGTTCTATTTGCCATGGC+TGG | 0.406796 | 5.4:+34146484 | MS.gene99288:CDS |
| ATTGAATGCTGGTGAGAATA+GGG | 0.408151 | 5.4:-34147921 | None:intergenic |
| TAAGCTTTCAATGATGACTT+TGG | 0.414272 | 5.4:-34148091 | None:intergenic |
| TTGGGAGATTGGAATGGTAG+AGG | 0.424567 | 5.4:+34148115 | MS.gene99288:CDS |
| AGGCAGTGTAAACACTCAAA+TGG | 0.430640 | 5.4:-34147988 | None:intergenic |
| AATTGAATGCTGGTGAGAAT+AGG | 0.431496 | 5.4:-34147922 | None:intergenic |
| TTTGGAAAGAGCACTTTCAT+TGG | 0.434011 | 5.4:+34147863 | MS.gene99288:CDS |
| GCCTTCTGTTCTATTTGCCA+TGG | 0.436677 | 5.4:+34146480 | MS.gene99288:CDS |
| TTTGTCCACTCAGTATGCTT+GGG | 0.439898 | 5.4:+34146531 | MS.gene99288:CDS |
| ATTTGTCCACTCAGTATGCT+TGG | 0.448183 | 5.4:+34146530 | MS.gene99288:CDS |
| AGAGGATGGGCATTGTTGGC+TGG | 0.449256 | 5.4:+34148133 | MS.gene99288:CDS |
| GGTGGGGTTGTCCTTAGCAT+TGG | 0.454459 | 5.4:+34146505 | MS.gene99288:CDS |
| CTACACCATCACTAATCTCT+TGG | 0.456636 | 5.4:+34144520 | MS.gene99288:CDS |
| AGTGATGGTGTAGTCAAGAT+AGG | 0.456695 | 5.4:-34144510 | None:intergenic |
| AGGAGAACATATACATTGCT+TGG | 0.456969 | 5.4:+34148455 | MS.gene99288:CDS |
| GACTTTGGTAAGTTCAAGAC+AGG | 0.459110 | 5.4:-34148076 | None:intergenic |
| CTTGACCTCCCATAAATTGA+AGG | 0.462856 | 5.4:-34148180 | None:intergenic |
| TTGGAAAGAGCACTTTCATT+GGG | 0.469183 | 5.4:+34147864 | MS.gene99288:CDS |
| GTTCTATTTGCCATGGCTGG+TGG | 0.476128 | 5.4:+34146487 | MS.gene99288:CDS |
| AATGTATATGGTGGAGAGCA+AGG | 0.477899 | 5.4:+34144388 | None:intergenic |
| GAAGGTGATGTTTAGAATGA+TGG | 0.478524 | 5.4:-34148044 | None:intergenic |
| GATACAAAGGATATAGAGAA+TGG | 0.484741 | 5.4:+34147471 | MS.gene99288:CDS |
| TGGTAGAGGATGGGCATTGT+TGG | 0.492922 | 5.4:+34148129 | MS.gene99288:CDS |
| TGCAGCTGTCGCAGTGCTCA+TGG | 0.495704 | 5.4:+34148499 | MS.gene99288:CDS |
| TCCAATAAAGTCATCACAGC+TGG | 0.498538 | 5.4:-34144461 | None:intergenic |
| AGTTCAAGACAGGGTGGTAA+AGG | 0.499357 | 5.4:-34148066 | None:intergenic |
| TGGTTTCCTTGTTGTTCTTG+GGG | 0.501836 | 5.4:+34144432 | MS.gene99288:CDS |
| GGAGAACATATACATTGCTT+GGG | 0.522179 | 5.4:+34148456 | MS.gene99288:CDS |
| TCTATTTGCCATGGCTGGTG+GGG | 0.531350 | 5.4:+34146489 | MS.gene99288:CDS |
| GAGATTGGAATGGTAGAGGA+TGG | 0.533659 | 5.4:+34148119 | MS.gene99288:CDS |
| TTTGTTGCCAAATTGAATGC+TGG | 0.537646 | 5.4:-34147932 | None:intergenic |
| TTTATGGGAGGTCAAGCTGC+TGG | 0.548399 | 5.4:+34148187 | MS.gene99288:CDS |
| CCCCAGAAAGTGCTCACAAG+TGG | 0.548827 | 5.4:-34148398 | None:intergenic |
| CAGTGCTCATGGCATCATCT+GGG | 0.551445 | 5.4:+34148510 | MS.gene99288:CDS |
| CCTGCATACAAAGCCAAAGC+AGG | 0.561913 | 5.4:+34147501 | MS.gene99288:CDS |
| CTGTGATGACTTTATTGGAA+AGG | 0.567287 | 5.4:+34144465 | MS.gene99288:CDS |
| CCACTTGTGAGCACTTTCTG+GGG | 0.568469 | 5.4:+34148398 | MS.gene99288:CDS |
| TGGACAAATTTCCAATGCTA+AGG | 0.572809 | 5.4:-34146516 | None:intergenic |
| AAGGACAACCCCACCAGCCA+TGG | 0.574097 | 5.4:-34146497 | None:intergenic |
| TACATAAACAGTTGATACAA+AGG | 0.575723 | 5.4:+34147458 | MS.gene99288:intron |
| GCTTATTTGGGAGATTGGAA+TGG | 0.576513 | 5.4:+34148109 | MS.gene99288:CDS |
| GCCATGGCAAATAGAACAGA+AGG | 0.577335 | 5.4:-34146481 | None:intergenic |
| ATGTATATGGTGGAGAGCAA+GGG | 0.579654 | 5.4:+34144389 | MS.gene99288:CDS |
| AGATTGGAATGGTAGAGGAT+GGG | 0.587460 | 5.4:+34148120 | MS.gene99288:CDS |
| CTTTATCTAAAGTGTCCCAC+TGG | 0.593890 | 5.4:-34147958 | None:intergenic |
| ATCAGTGCCTATTTGACCAA+AGG | 0.596958 | 5.4:-34144564 | None:intergenic |
| CAAGACAGGGTGGTAAAGGA+AGG | 0.602138 | 5.4:-34148062 | None:intergenic |
| GTGGGACACTTTAGATAAAG+GGG | 0.607185 | 5.4:+34147961 | MS.gene99288:CDS |
| AGGTGCCATAGTATGCATGC+TGG | 0.613318 | 5.4:+34144412 | MS.gene99288:CDS |
| GCGAGTATAGAAAATCATCA+AGG | 0.624685 | 5.4:+34148435 | MS.gene99288:CDS |
| AGCAGCCAAGAGATTAGTGA+TGG | 0.628687 | 5.4:-34144525 | None:intergenic |
| TGACAATAAGGCTAAGCTCA+AGG | 0.632197 | 5.4:+34146841 | MS.gene99288:CDS |
| ATGACTTTATTGGAAAGGAG+AGG | 0.632269 | 5.4:+34144470 | MS.gene99288:CDS |
| CCATGTCCCCAAGAACAACA+AGG | 0.634994 | 5.4:-34144438 | None:intergenic |
| TTTGGCAACAAATGACCAGT+GGG | 0.645158 | 5.4:+34147943 | MS.gene99288:CDS |
| TATATGGTGGAGAGCAAGGG+AGG | 0.646098 | 5.4:+34144392 | MS.gene99288:CDS |
| ATTTGGCAACAAATGACCAG+TGG | 0.659655 | 5.4:+34147942 | MS.gene99288:CDS |
| ACTTTGAATGAAGCAAGTGA+AGG | 0.661781 | 5.4:+34147361 | MS.gene99288:CDS |
| GGCCATTCCCAAATCCACAA+AGG | 0.662272 | 5.4:-34148159 | None:intergenic |
| TAGTCAAGATAGGTGTGCTG+AGG | 0.663042 | 5.4:-34144500 | None:intergenic |
| AATGGCCTTCAATTTATGGG+AGG | 0.663432 | 5.4:+34148175 | MS.gene99288:CDS |
| GCAGTGTAAACACTCAAATG+GGG | 0.715897 | 5.4:-34147986 | None:intergenic |
| AAAAGCCCAAGCATACTGAG+TGG | 0.720310 | 5.4:-34146536 | None:intergenic |
| TTGGTAAGTTCAAGACAGGG+TGG | 0.721147 | 5.4:-34148072 | None:intergenic |
| ACTTTGGTAAGTTCAAGACA+GGG | 0.729421 | 5.4:-34148075 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTCATTTTTTTAAT+TGG | - | chr5.4:34145593-34145612 | None:intergenic | 10.0% |
| !!! | TAAAAAAAATTTGTTGTTTT+TGG | + | chr5.4:34145200-34145219 | MS.gene99288:intron | 10.0% |
| !!! | TATCAAAATTAAACTTTTTT+AGG | - | chr5.4:34146981-34147000 | None:intergenic | 10.0% |
| !! | AAAAAGTAAAATTCTATTTG+CGG | + | chr5.4:34147756-34147775 | MS.gene99288:intron | 15.0% |
| !! | TAATTCCTAGAAAAAAAAAT+TGG | - | chr5.4:34146219-34146238 | None:intergenic | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | + | chr5.4:34145406-34145425 | MS.gene99288:intron | 15.0% |
| !!! | AAAAAACAAAATATTTTGCA+GGG | - | chr5.4:34145329-34145348 | None:intergenic | 15.0% |
| !!! | AAACAACAAATTTTTTTTAC+AGG | - | chr5.4:34145199-34145218 | None:intergenic | 15.0% |
| !!! | AACAACAAATTTTTTTTACA+GGG | - | chr5.4:34145198-34145217 | None:intergenic | 15.0% |
| !!! | AATATTTTAAACGATAAAAG+AGG | + | chr5.4:34145006-34145025 | MS.gene99288:intron | 15.0% |
| !!! | ATTTTTTAACCAAAATTTGA+TGG | + | chr5.4:34147277-34147296 | MS.gene99288:intron | 15.0% |
| !!! | GAAAAAAAATTTGTAGTTTT+TGG | - | chr5.4:34145433-34145452 | None:intergenic | 15.0% |
| !!! | GTATTTAACTTTAAAGAAAA+TGG | + | chr5.4:34145556-34145575 | MS.gene99288:intron | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | + | chr5.4:34145405-34145424 | MS.gene99288:intron | 15.0% |
| !!! | TAAAAAACAAAATATTTTGC+AGG | - | chr5.4:34145330-34145349 | None:intergenic | 15.0% |
| !!! | TAAAAACAAAATATTTTGCA+GGG | - | chr5.4:34145227-34145246 | None:intergenic | 15.0% |
| !!! | TTAAAAACAAAATATTTTGC+AGG | - | chr5.4:34145228-34145247 | None:intergenic | 15.0% |
| !! | AGAATTTAAAGGCTAAAATA+TGG | - | chr5.4:34145499-34145518 | None:intergenic | 20.0% |
| !! | ATCAACTGTTTATGTAATAA+AGG | - | chr5.4:34147454-34147473 | None:intergenic | 20.0% |
| !! | ATTGGAAAATAAGAAAGAAA+TGG | - | chr5.4:34144957-34144976 | None:intergenic | 20.0% |
| !! | ATTTAAATTCGGCTAAAATA+TGG | + | chr5.4:34145134-34145153 | MS.gene99288:intron | 20.0% |
| !! | TGTTTATTCTAAATTGAAAG+AGG | + | chr5.4:34144642-34144661 | MS.gene99288:intron | 20.0% |
| !! | TTGGAAAATAAGAAAGAAAT+GGG | - | chr5.4:34144956-34144975 | None:intergenic | 20.0% |
| !! | TTTAGCCGAATTTAAATTAT+GGG | - | chr5.4:34145131-34145150 | None:intergenic | 20.0% |
| !!! | AAAATTTGTTATTTTGCTAG+GGG | + | chr5.4:34147325-34147344 | MS.gene99288:intron | 20.0% |
| !!! | AAACTACAAATTTTTTTTCC+AGG | + | chr5.4:34145434-34145453 | MS.gene99288:intron | 20.0% |
| !!! | AACTACAAATTTTTTTTCCA+GGG | + | chr5.4:34145435-34145454 | MS.gene99288:intron | 20.0% |
| !!! | AATTAAACTTTTTTAGGAGA+TGG | - | chr5.4:34146975-34146994 | None:intergenic | 20.0% |
| !!! | AGGTTCTTATTTTCAAATAT+TGG | - | chr5.4:34144975-34144994 | None:intergenic | 20.0% |
| !!! | AGTTGGTTTTTTAAATGTAA+AGG | - | chr5.4:34146190-34146209 | None:intergenic | 20.0% |
| !!! | ATTAAACTTTTTTAGGAGAT+GGG | - | chr5.4:34146974-34146993 | None:intergenic | 20.0% |
| !!! | CAAAATCAAAATATTTTGCA+GGG | - | chr5.4:34145360-34145379 | None:intergenic | 20.0% |
| !!! | CAAAATTTGTTATTTTGCTA+GGG | + | chr5.4:34147324-34147343 | MS.gene99288:intron | 20.0% |
| !!! | CACAACATTGAATTATTTTT+TGG | + | chr5.4:34146721-34146740 | MS.gene99288:CDS | 20.0% |
| !!! | TAGATGATATTTTTAGTCAT+GGG | + | chr5.4:34144711-34144730 | MS.gene99288:intron | 20.0% |
| !!! | TAGTTTGTGAAATTTCAATA+AGG | - | chr5.4:34147586-34147605 | None:intergenic | 20.0% |
| !!! | TATAATTTCTGATTTTGTCT+TGG | + | chr5.4:34147235-34147254 | MS.gene99288:intron | 20.0% |
| !!! | TCAAAATCAAAATATTTTGC+AGG | - | chr5.4:34145361-34145380 | None:intergenic | 20.0% |
| !!! | TTAGATGATATTTTTAGTCA+TGG | + | chr5.4:34144710-34144729 | MS.gene99288:intron | 20.0% |
| !!! | TTTTAGCCGAATTTAAATTA+TGG | - | chr5.4:34145132-34145151 | None:intergenic | 20.0% |
| ! | AAAATAAGAAAGAAATGGGT+TGG | - | chr5.4:34144952-34144971 | None:intergenic | 25.0% |
| ! | AAAATGTGCAGAAATTAGTT+GGG | - | chr5.4:34146934-34146953 | None:intergenic | 25.0% |
| ! | AAACTATGATTTAGACAATG+AGG | + | chr5.4:34147796-34147815 | MS.gene99288:intron | 25.0% |
| ! | AACTATGATTTAGACAATGA+GGG | + | chr5.4:34147797-34147816 | MS.gene99288:intron | 25.0% |
| ! | AGAGACTGAAAAATAAAAGA+AGG | - | chr5.4:34148011-34148030 | None:intergenic | 25.0% |
| ! | ATTCCTTTCTAAATTACGTT+TGG | + | chr5.4:34147186-34147205 | MS.gene99288:intron | 25.0% |
| ! | CTCTTATTAGAAGATACAAA+AGG | + | chr5.4:34145751-34145770 | MS.gene99288:intron | 25.0% |
| ! | GAAAAAATCATTCAACTTGT+AGG | + | chr5.4:34145604-34145623 | MS.gene99288:intron | 25.0% |
| ! | GTTATGCAAATAAAGAAAGA+GGG | - | chr5.4:34145857-34145876 | None:intergenic | 25.0% |
| ! | TATGATTGATTATGACCTAT+TGG | - | chr5.4:34147032-34147051 | None:intergenic | 25.0% |
| ! | TCATCATTGAAAGCTTATTT+GGG | + | chr5.4:34148097-34148116 | MS.gene99288:CDS | 25.0% |
| ! | TGAGAAAAAAAGATCCATTA+AGG | + | chr5.4:34147548-34147567 | MS.gene99288:CDS | 25.0% |
| ! | TGAGACCCATAATTTAAATT+CGG | + | chr5.4:34145123-34145142 | MS.gene99288:intron | 25.0% |
| ! | TGTAATAAAGGAGAAGAAAA+AGG | - | chr5.4:34147442-34147461 | None:intergenic | 25.0% |
| ! | TTATGCAAATAAAGAAAGAG+GGG | - | chr5.4:34145856-34145875 | None:intergenic | 25.0% |
| ! | TTTGCATTCAAACTCTTATT+TGG | - | chr5.4:34144845-34144864 | None:intergenic | 25.0% |
| !! | AAAAGTTTTACATTGCCAAT+AGG | + | chr5.4:34147014-34147033 | MS.gene99288:intron | 25.0% |
| !! | AAATAAGAAAGAAATGGGTT+GGG | - | chr5.4:34144951-34144970 | None:intergenic | 25.0% |
| !! | ACTTTGTATGATAATGTATG+GGG | - | chr5.4:34145951-34145970 | None:intergenic | 25.0% |
| !! | AGACTTTGTATGATAATGTA+TGG | - | chr5.4:34145953-34145972 | None:intergenic | 25.0% |
| !! | CCTAGCAAAATAACAAATTT+TGG | - | chr5.4:34147326-34147345 | None:intergenic | 25.0% |
| !! | CTCTATTTACCATCAAATTT+TGG | - | chr5.4:34147289-34147308 | None:intergenic | 25.0% |
| !! | GACTTTGTATGATAATGTAT+GGG | - | chr5.4:34145952-34145971 | None:intergenic | 25.0% |
| !! | TACATAAACAGTTGATACAA+AGG | + | chr5.4:34147458-34147477 | MS.gene99288:intron | 25.0% |
| !! | TATAGTTTGAGGCAAAAAAT+AGG | - | chr5.4:34144821-34144840 | None:intergenic | 25.0% |
| !! | TCTTATTTGGTTATAGTTTG+AGG | - | chr5.4:34144832-34144851 | None:intergenic | 25.0% |
| !! | TGAACCTATTTTGTAGATTT+TGG | + | chr5.4:34145302-34145321 | MS.gene99288:intron | 25.0% |
| !! | TTTTAAATGTAAAGGCTTCA+TGG | - | chr5.4:34146182-34146201 | None:intergenic | 25.0% |
| !! | TTTTATTCAGATACTCCATT+TGG | + | chr5.4:34148308-34148327 | MS.gene99288:intron | 25.0% |
| !!! | ACGATTGTAGTTTTAAACTT+CGG | - | chr5.4:34147635-34147654 | None:intergenic | 25.0% |
| !!! | ACTCTCCAATTTTTTTTTCT+AGG | + | chr5.4:34146211-34146230 | MS.gene99288:intron | 25.0% |
| !!! | CCAAAATTTGTTATTTTGCT+AGG | + | chr5.4:34147323-34147342 | MS.gene99288:intron | 25.0% |
| AAAAAAATTGGAGAGTGAGT+TGG | - | chr5.4:34146207-34146226 | None:intergenic | 30.0% | |
| AAAATCATTCAACTTGTAGG+AGG | + | chr5.4:34145607-34145626 | MS.gene99288:intron | 30.0% | |
| AACTTTGTTGAATTTGTCAC+AGG | + | chr5.4:34146698-34146717 | MS.gene99288:intron | 30.0% | |
| AAGTTGTTTACCTTAGTTAC+TGG | - | chr5.4:34146040-34146059 | None:intergenic | 30.0% | |
| AATTCAGCAGAATTCAATAC+TGG | - | chr5.4:34146678-34146697 | None:intergenic | 30.0% | |
| AGTTGTTTACCTTAGTTACT+GGG | - | chr5.4:34146039-34146058 | None:intergenic | 30.0% | |
| ATCTAATACTGCTGACAATA+AGG | + | chr5.4:34146829-34146848 | MS.gene99288:CDS | 30.0% | |
| ATGCAAATCATCACAAAAGT+AGG | - | chr5.4:34145265-34145284 | None:intergenic | 30.0% | |
| CAAAACGAAACATATTTGCA+CGG | + | chr5.4:34145466-34145485 | MS.gene99288:intron | 30.0% | |
| CAAAATGAGACATATTTGCA+GGG | - | chr5.4:34145167-34145186 | None:intergenic | 30.0% | |
| CAACCAAACGTAATTTAGAA+AGG | - | chr5.4:34147192-34147211 | None:intergenic | 30.0% | |
| CATGGGAGAAGATAAATAAT+AGG | + | chr5.4:34144728-34144747 | MS.gene99288:intron | 30.0% | |
| CTTTCTAAATTACGTTTGGT+TGG | + | chr5.4:34147190-34147209 | MS.gene99288:intron | 30.0% | |
| GAAAATGTGCAGAAATTAGT+TGG | - | chr5.4:34146935-34146954 | None:intergenic | 30.0% | |
| GATACAAAGGATATAGAGAA+TGG | + | chr5.4:34147471-34147490 | MS.gene99288:CDS | 30.0% | |
| GGTTATGCAAATAAAGAAAG+AGG | - | chr5.4:34145858-34145877 | None:intergenic | 30.0% | |
| GTCATCATTGAAAGCTTATT+TGG | + | chr5.4:34148096-34148115 | MS.gene99288:CDS | 30.0% | |
| TAAGCTTTCAATGATGACTT+TGG | - | chr5.4:34148094-34148113 | None:intergenic | 30.0% | |
| TCAAAATGAGACATATTTGC+AGG | - | chr5.4:34145168-34145187 | None:intergenic | 30.0% | |
| TGCAAATCATCACAAAAGTA+GGG | - | chr5.4:34145264-34145283 | None:intergenic | 30.0% | |
| TTAGCAATAACTTTCTTTGC+AGG | + | chr5.4:34147887-34147906 | MS.gene99288:CDS | 30.0% | |
| ! | ACATAACTTTTCTTTCAGTG+AGG | + | chr5.4:34148266-34148285 | MS.gene99288:intron | 30.0% |
| ! | ATAACTTTTCTTTCAGTGAG+GGG | + | chr5.4:34148268-34148287 | MS.gene99288:intron | 30.0% |
| ! | CATAACTTTTCTTTCAGTGA+GGG | + | chr5.4:34148267-34148286 | MS.gene99288:intron | 30.0% |
| ! | TATCTGAGATGATTGATTGA+CGG | + | chr5.4:34147099-34147118 | MS.gene99288:intron | 30.0% |
| ! | TTTTCCACTTTCTTCTATGT+GGG | + | chr5.4:34144914-34144933 | MS.gene99288:intron | 30.0% |
| ! | TTTTTCCACTTTCTTCTATG+TGG | + | chr5.4:34144913-34144932 | MS.gene99288:intron | 30.0% |
| !! | AATAAGAAAGAAATGGGTTG+GGG | - | chr5.4:34144950-34144969 | None:intergenic | 30.0% |
| !! | TTGAAGTACTTTCTTCGTTT+TGG | - | chr5.4:34147165-34147184 | None:intergenic | 30.0% |
| !!! | TTGTTTTTTAAAGTAGTCCC+CGG | - | chr5.4:34145395-34145414 | None:intergenic | 30.0% |
| !!! | TTTTTGGTTGCAGTTTGTTT+AGG | + | chr5.4:34146791-34146810 | MS.gene99288:CDS | 30.0% |
| AATTGAATGCTGGTGAGAAT+AGG | - | chr5.4:34147925-34147944 | None:intergenic | 35.0% | |
| ACGTACATTTCGCTATTTGA+AGG | + | chr5.4:34148353-34148372 | MS.gene99288:intron | 35.0% | |
| ACTTTGAATGAAGCAAGTGA+AGG | + | chr5.4:34147361-34147380 | MS.gene99288:CDS | 35.0% | |
| ACTTTGGTAAGTTCAAGACA+GGG | - | chr5.4:34148078-34148097 | None:intergenic | 35.0% | |
| AGGAGAACATATACATTGCT+TGG | + | chr5.4:34148455-34148474 | MS.gene99288:CDS | 35.0% | |
| AGTGGGACACTTTAGATAAA+GGG | + | chr5.4:34147960-34147979 | MS.gene99288:CDS | 35.0% | |
| ATGACTTTATTGGAAAGGAG+AGG | + | chr5.4:34144470-34144489 | MS.gene99288:CDS | 35.0% | |
| ATTCTCACCAGCATTCAATT+TGG | + | chr5.4:34147925-34147944 | MS.gene99288:CDS | 35.0% | |
| ATTGAATGCTGGTGAGAATA+GGG | - | chr5.4:34147924-34147943 | None:intergenic | 35.0% | |
| CAAGTGAAGGTAACAAACTT+TGG | + | chr5.4:34147374-34147393 | MS.gene99288:intron | 35.0% | |
| CTGTGATGACTTTATTGGAA+AGG | + | chr5.4:34144465-34144484 | MS.gene99288:CDS | 35.0% | |
| GAGACAATACCACACAAAAT+AGG | - | chr5.4:34147403-34147422 | None:intergenic | 35.0% | |
| GCGAGTATAGAAAATCATCA+AGG | + | chr5.4:34148435-34148454 | MS.gene99288:CDS | 35.0% | |
| GGAGAACATATACATTGCTT+GGG | + | chr5.4:34148456-34148475 | MS.gene99288:CDS | 35.0% | |
| GGGACCAAAATCTACAAAAT+AGG | - | chr5.4:34145309-34145328 | None:intergenic | 35.0% | |
| GTGATCAAGTAAGTGTTTCT+CGG | - | chr5.4:34146286-34146305 | None:intergenic | 35.0% | |
| GTTATCATTGCTTTCACCTT+TGG | + | chr5.4:34144548-34144567 | MS.gene99288:CDS | 35.0% | |
| GTTGTTTACCTTAGTTACTG+GGG | - | chr5.4:34146038-34146057 | None:intergenic | 35.0% | |
| TAAAACCATTTGCAGGTGTT+TGG | + | chr5.4:34147845-34147864 | MS.gene99288:intron | 35.0% | |
| TAGAGAAATGCAGACAAACA+CGG | + | chr5.4:34147682-34147701 | MS.gene99288:intron | 35.0% | |
| TGAAAGCTTATTTGGGAGAT+TGG | + | chr5.4:34148104-34148123 | MS.gene99288:CDS | 35.0% | |
| TGACAAAGAGAATCCAAAAC+AGG | + | chr5.4:34144890-34144909 | MS.gene99288:intron | 35.0% | |
| TGATCAAGTAAGTGTTTCTC+GGG | - | chr5.4:34146285-34146304 | None:intergenic | 35.0% | |
| TGCGTATATTGAAGTCCAAA+TGG | - | chr5.4:34148326-34148345 | None:intergenic | 35.0% | |
| TGGACAAATTTCCAATGCTA+AGG | - | chr5.4:34146519-34146538 | None:intergenic | 35.0% | |
| TTGTTTACCTTAGTTACTGG+GGG | - | chr5.4:34146037-34146056 | None:intergenic | 35.0% | |
| TTTCCACTTTCTTCTATGTG+GGG | + | chr5.4:34144915-34144934 | MS.gene99288:intron | 35.0% | |
| TTTGTTGCCAAATTGAATGC+TGG | - | chr5.4:34147935-34147954 | None:intergenic | 35.0% | |
| ! | AAAGCTGAGATTCTTTTTCC+AGG | + | chr5.4:34146758-34146777 | MS.gene99288:CDS | 35.0% |
| ! | AGTTTGAGGCAAAAAATAGG+TGG | - | chr5.4:34144818-34144837 | None:intergenic | 35.0% |
| ! | ATGATAATGTATGGGGTTGT+GGG | - | chr5.4:34145944-34145963 | None:intergenic | 35.0% |
| ! | CGTGCAAATATGTTTCGTTT+TGG | - | chr5.4:34145468-34145487 | None:intergenic | 35.0% |
| ! | GAAAGTGGAAAAACCTGTTT+TGG | - | chr5.4:34144906-34144925 | None:intergenic | 35.0% |
| ! | GAAGGTGATGTTTAGAATGA+TGG | - | chr5.4:34148047-34148066 | None:intergenic | 35.0% |
| ! | TATGATAATGTATGGGGTTG+TGG | - | chr5.4:34145945-34145964 | None:intergenic | 35.0% |
| !! | ATAAGAAAGAAATGGGTTGG+GGG | - | chr5.4:34144949-34144968 | None:intergenic | 35.0% |
| !! | ATTTTGAAAATAGTCCCTCC+GGG | + | chr5.4:34145374-34145393 | MS.gene99288:intron | 35.0% |
| !! | CTGCAAATGGTTTTACACAA+CGG | - | chr5.4:34147840-34147859 | None:intergenic | 35.0% |
| !! | CTTTGGTTTCCTATTTTGTG+TGG | + | chr5.4:34147391-34147410 | MS.gene99288:intron | 35.0% |
| !! | GATTTTGAAAATAGTCCCTC+CGG | + | chr5.4:34145373-34145392 | MS.gene99288:intron | 35.0% |
| !! | TAAAGCACCTATTTCTGTAC+CGG | + | chr5.4:34146063-34146082 | MS.gene99288:intron | 35.0% |
| !! | TTGGAAAGAGCACTTTCATT+GGG | + | chr5.4:34147864-34147883 | MS.gene99288:CDS | 35.0% |
| !! | TTTGGAAAGAGCACTTTCAT+TGG | + | chr5.4:34147863-34147882 | MS.gene99288:CDS | 35.0% |
| AAATACTGCAGTTCCTGCTT+TGG | - | chr5.4:34147517-34147536 | None:intergenic | 40.0% | |
| AATGGCCTTCAATTTATGGG+AGG | + | chr5.4:34148175-34148194 | MS.gene99288:CDS | 40.0% | |
| AGATTGGAATGGTAGAGGAT+GGG | + | chr5.4:34148120-34148139 | MS.gene99288:CDS | 40.0% | |
| AGGCAGTGTAAACACTCAAA+TGG | - | chr5.4:34147991-34148010 | None:intergenic | 40.0% | |
| ATCAGTGCCTATTTGACCAA+AGG | - | chr5.4:34144567-34144586 | None:intergenic | 40.0% | |
| ATCATCACAAAAGTAGGGTC+AGG | - | chr5.4:34145259-34145278 | None:intergenic | 40.0% | |
| ATCATTCAACTTGTAGGAGG+AGG | + | chr5.4:34145610-34145629 | MS.gene99288:intron | 40.0% | |
| ATTTCAGGGAAGACCTATGT+GGG | - | chr5.4:34146014-34146033 | None:intergenic | 40.0% | |
| ATTTGGCAACAAATGACCAG+TGG | + | chr5.4:34147942-34147961 | MS.gene99288:CDS | 40.0% | |
| ATTTGTCCACTCAGTATGCT+TGG | + | chr5.4:34146530-34146549 | MS.gene99288:CDS | 40.0% | |
| CAGTGGGACACTTTAGATAA+AGG | + | chr5.4:34147959-34147978 | MS.gene99288:CDS | 40.0% | |
| CGTTGTGTAAAACCATTTGC+AGG | + | chr5.4:34147838-34147857 | MS.gene99288:intron | 40.0% | |
| CTACACCATCACTAATCTCT+TGG | + | chr5.4:34144520-34144539 | MS.gene99288:CDS | 40.0% | |
| CTCGCATATGTTTAGCAAGA+GGG | - | chr5.4:34145695-34145714 | None:intergenic | 40.0% | |
| CTTGACCTCCCATAAATTGA+AGG | - | chr5.4:34148183-34148202 | None:intergenic | 40.0% | |
| GAAAGCTGAGACAAGAAGTT+AGG | - | chr5.4:34144593-34144612 | None:intergenic | 40.0% | |
| GACTTTGGTAAGTTCAAGAC+AGG | - | chr5.4:34148079-34148098 | None:intergenic | 40.0% | |
| GCAGTGTAAACACTCAAATG+GGG | - | chr5.4:34147989-34148008 | None:intergenic | 40.0% | |
| GCTTATTTGGGAGATTGGAA+TGG | + | chr5.4:34148109-34148128 | MS.gene99288:CDS | 40.0% | |
| GCTTTCACCTTTGGTCAAAT+AGG | + | chr5.4:34144557-34144576 | MS.gene99288:CDS | 40.0% | |
| GGAATAACGACTTGCCTTAA+TGG | - | chr5.4:34147565-34147584 | None:intergenic | 40.0% | |
| GGCAGTGTAAACACTCAAAT+GGG | - | chr5.4:34147990-34148009 | None:intergenic | 40.0% | |
| GGGAATGGCCTTCAATTTAT+GGG | + | chr5.4:34148172-34148191 | MS.gene99288:CDS | 40.0% | |
| GGGTACATAGAGATAGAAGA+GGG | - | chr5.4:34146265-34146284 | None:intergenic | 40.0% | |
| GGTACATAGAGATAGAAGAG+GGG | - | chr5.4:34146264-34146283 | None:intergenic | 40.0% | |
| GGTATCAAAGCTAGGTTACT+TGG | - | chr5.4:34145784-34145803 | None:intergenic | 40.0% | |
| GTGGGACACTTTAGATAAAG+GGG | + | chr5.4:34147961-34147980 | MS.gene99288:CDS | 40.0% | |
| TCATCACAAAAGTAGGGTCA+GGG | - | chr5.4:34145258-34145277 | None:intergenic | 40.0% | |
| TCCAATAAAGTCATCACAGC+TGG | - | chr5.4:34144464-34144483 | None:intergenic | 40.0% | |
| TCTATTACCTTCCGAAGTAG+CGG | + | chr5.4:34145970-34145989 | MS.gene99288:intron | 40.0% | |
| TCTTTCCAAACACCTGCAAA+TGG | - | chr5.4:34147853-34147872 | None:intergenic | 40.0% | |
| TGACAAGTGGTATCAAAGCT+AGG | - | chr5.4:34145792-34145811 | None:intergenic | 40.0% | |
| TGACAATAAGGCTAAGCTCA+AGG | + | chr5.4:34146841-34146860 | MS.gene99288:CDS | 40.0% | |
| TGGGAATGGCCTTCAATTTA+TGG | + | chr5.4:34148171-34148190 | MS.gene99288:CDS | 40.0% | |
| TTAGTTACTGGGGGATTTCA+GGG | - | chr5.4:34146028-34146047 | None:intergenic | 40.0% | |
| TTTGGCAACAAATGACCAGT+GGG | + | chr5.4:34147943-34147962 | MS.gene99288:CDS | 40.0% | |
| TTTGTCCACTCAGTATGCTT+GGG | + | chr5.4:34146531-34146550 | MS.gene99288:CDS | 40.0% | |
| ! | AGCTTTGATACCACTTGTCA+CGG | + | chr5.4:34145792-34145811 | MS.gene99288:intron | 40.0% |
| ! | AGTGATGGTGTAGTCAAGAT+AGG | - | chr5.4:34144513-34144532 | None:intergenic | 40.0% |
| ! | ATGTATATGGTGGAGAGCAA+GGG | + | chr5.4:34144389-34144408 | MS.gene99288:CDS | 40.0% |
| ! | CTTTATCTAAAGTGTCCCAC+TGG | - | chr5.4:34147961-34147980 | None:intergenic | 40.0% |
| ! | GAAAGTGTGATGTTTGATGC+AGG | + | chr5.4:34146450-34146469 | MS.gene99288:intron | 40.0% |
| ! | GAGATTCTTTTTCCAGGAGT+TGG | + | chr5.4:34146764-34146783 | MS.gene99288:CDS | 40.0% |
| !! | CTGGTTTCCTTGTTGTTCTT+GGG | + | chr5.4:34144431-34144450 | MS.gene99288:CDS | 40.0% |
| !! | TGGTTTCCTTGTTGTTCTTG+GGG | + | chr5.4:34144432-34144451 | MS.gene99288:CDS | 40.0% |
| !! | TTTTGAAAATAGTCCCTCCG+GGG | + | chr5.4:34145375-34145394 | MS.gene99288:intron | 40.0% |
| !!! | TTCGTTTTGGTTTTAGTCCC+TGG | - | chr5.4:34145455-34145474 | None:intergenic | 40.0% |
| !!! | TTTTTAAAGTAGTCCCCGGA+GGG | - | chr5.4:34145391-34145410 | None:intergenic | 40.0% |
| !!! | TTTTTTAAAGTAGTCCCCGG+AGG | - | chr5.4:34145392-34145411 | None:intergenic | 40.0% |
| AAAAGCCCAAGCATACTGAG+TGG | - | chr5.4:34146539-34146558 | None:intergenic | 45.0% | |
| ACCAAAAAGCAACCAACTCC+TGG | - | chr5.4:34146779-34146798 | None:intergenic | 45.0% | |
| AGCAGCCAAGAGATTAGTGA+TGG | - | chr5.4:34144528-34144547 | None:intergenic | 45.0% | |
| AGTTCAAGACAGGGTGGTAA+AGG | - | chr5.4:34148069-34148088 | None:intergenic | 45.0% | |
| ATCACACACAACAACAGGCA+TGG | + | chr5.4:34145882-34145901 | MS.gene99288:intron | 45.0% | |
| ATGCCCCACATAGAAGAAAG+TGG | - | chr5.4:34144921-34144940 | None:intergenic | 45.0% | |
| ATTCAACTTGTAGGAGGAGG+AGG | + | chr5.4:34145613-34145632 | MS.gene99288:intron | 45.0% | |
| CACTCTGCTTTCTAACGCAA+CGG | + | chr5.4:34145821-34145840 | MS.gene99288:intron | 45.0% | |
| CCTCGCATATGTTTAGCAAG+AGG | - | chr5.4:34145696-34145715 | None:intergenic | 45.0% | |
| CCTCTTGCTAAACATATGCG+AGG | + | chr5.4:34145693-34145712 | MS.gene99288:intron | 45.0% | |
| CGGGTACATAGAGATAGAAG+AGG | - | chr5.4:34146266-34146285 | None:intergenic | 45.0% | |
| CTATTACCTTCCGAAGTAGC+GGG | + | chr5.4:34145971-34145990 | MS.gene99288:intron | 45.0% | |
| CTCCTTTGTGGATTTGGGAA+TGG | + | chr5.4:34148157-34148176 | MS.gene99288:CDS | 45.0% | |
| CTGAAATCCCCCAGTAACTA+AGG | + | chr5.4:34146027-34146046 | MS.gene99288:intron | 45.0% | |
| CTGGTCTCCTTTGTGGATTT+GGG | + | chr5.4:34148152-34148171 | MS.gene99288:CDS | 45.0% | |
| CTTAGTTACTGGGGGATTTC+AGG | - | chr5.4:34146029-34146048 | None:intergenic | 45.0% | |
| CTTCTTGTCTCAGCTTTCTC+AGG | + | chr5.4:34144595-34144614 | MS.gene99288:CDS | 45.0% | |
| GAGAGATTGAATCCTCGTCA+AGG | - | chr5.4:34145734-34145753 | None:intergenic | 45.0% | |
| GAGATTGGAATGGTAGAGGA+TGG | + | chr5.4:34148119-34148138 | MS.gene99288:CDS | 45.0% | |
| GATTGAATCCTCGTCAAGGA+AGG | - | chr5.4:34145730-34145749 | None:intergenic | 45.0% | |
| GATTTCAGGGAAGACCTATG+TGG | - | chr5.4:34146015-34146034 | None:intergenic | 45.0% | |
| GCCAGCTGTGATGACTTTAT+TGG | + | chr5.4:34144460-34144479 | MS.gene99288:CDS | 45.0% | |
| GCCATGGCAAATAGAACAGA+AGG | - | chr5.4:34146484-34146503 | None:intergenic | 45.0% | |
| GCCTTCTGTTCTATTTGCCA+TGG | + | chr5.4:34146480-34146499 | MS.gene99288:CDS | 45.0% | |
| GGAAACCAGCATGCATACTA+TGG | - | chr5.4:34144420-34144439 | None:intergenic | 45.0% | |
| TAGTCAAGATAGGTGTGCTG+AGG | - | chr5.4:34144503-34144522 | None:intergenic | 45.0% | |
| TCCACTTGTGAGCACTTTCT+GGG | + | chr5.4:34148397-34148416 | MS.gene99288:CDS | 45.0% | |
| TCTGTTCTATTTGCCATGGC+TGG | + | chr5.4:34146484-34146503 | MS.gene99288:CDS | 45.0% | |
| TTCCACTTGTGAGCACTTTC+TGG | + | chr5.4:34148396-34148415 | MS.gene99288:CDS | 45.0% | |
| TTCCGGAAGAGCGATGAAAA+AGG | + | chr5.4:34146086-34146105 | MS.gene99288:intron | 45.0% | |
| TTCTATTTGCCATGGCTGGT+GGG | + | chr5.4:34146488-34146507 | MS.gene99288:CDS | 45.0% | |
| TTGGGAGATTGGAATGGTAG+AGG | + | chr5.4:34148115-34148134 | MS.gene99288:CDS | 45.0% | |
| TTGGTAAGTTCAAGACAGGG+TGG | - | chr5.4:34148075-34148094 | None:intergenic | 45.0% | |
| TTGTCTCAGCTTTCTCAGGT+AGG | + | chr5.4:34144599-34144618 | MS.gene99288:intron | 45.0% | |
| ! | ACCTATGTGGGACACCTTTT+GGG | - | chr5.4:34146002-34146021 | None:intergenic | 45.0% |
| ! | CAGTATGCTTGGGCTTTTGT+TGG | + | chr5.4:34146541-34146560 | MS.gene99288:CDS | 45.0% |
| ! | CGTTAGAAAGCAGAGTGCTA+AGG | - | chr5.4:34145818-34145837 | None:intergenic | 45.0% |
| !! | ACCTATTTCTGTACCGGTTC+CGG | + | chr5.4:34146069-34146088 | MS.gene99288:intron | 45.0% |
| !! | CTCCTTTTTCATCGCTCTTC+CGG | - | chr5.4:34146091-34146110 | None:intergenic | 45.0% |
| !! | GCTGGTTTCCTTGTTGTTCT+TGG | + | chr5.4:34144430-34144449 | MS.gene99288:CDS | 45.0% |
| !!! | AGGAGTGTTCCTTTTGGGTT+GGG | + | chr5.4:34145633-34145652 | MS.gene99288:intron | 45.0% |
| !!! | TCCAGGAGTTGGTTGCTTTT+TGG | + | chr5.4:34146775-34146794 | MS.gene99288:CDS | 45.0% |
| !!! | TTCTGGGGCGTTGTTTTGTT+CGG | + | chr5.4:34148413-34148432 | MS.gene99288:CDS | 45.0% |
| !!! | AAATATTTTGTTTTTTAAAA+AGG | + | chr5.4:34145333-34145352 | MS.gene99288:intron | 5.0% |
| !!! | AAATTTTTATTAGAATTTAA+AGG | - | chr5.4:34145510-34145529 | None:intergenic | 5.0% |
| !!! | ATTTTTTCATTTTTTTAATT+GGG | - | chr5.4:34145592-34145611 | None:intergenic | 5.0% |
| !!! | TAAAATATTTTAATACAAAT+AGG | - | chr5.4:34144995-34145014 | None:intergenic | 5.0% |
| CAAGACAGGGTGGTAAAGGA+AGG | - | chr5.4:34148065-34148084 | None:intergenic | 50.0% | |
| CAGTGCTCATGGCATCATCT+GGG | + | chr5.4:34148510-34148529 | MS.gene99288:CDS | 50.0% | |
| CCACTTGTGAGCACTTTCTG+GGG | + | chr5.4:34148398-34148417 | MS.gene99288:CDS | 50.0% | |
| CCATGTCCCCAAGAACAACA+AGG | - | chr5.4:34144441-34144460 | None:intergenic | 50.0% | |
| CCTGCATACAAAGCCAAAGC+AGG | + | chr5.4:34147501-34147520 | MS.gene99288:CDS | 50.0% | |
| CTCGCATCACACACAACAAC+AGG | + | chr5.4:34145877-34145896 | MS.gene99288:intron | 50.0% | |
| CTCGTCAAGGAAGGCTAAGA+CGG | - | chr5.4:34145721-34145740 | None:intergenic | 50.0% | |
| CTGTTGTTGTGTGTGATGCG+AGG | - | chr5.4:34145879-34145898 | None:intergenic | 50.0% | |
| GGCCATTCCCAAATCCACAA+AGG | - | chr5.4:34148162-34148181 | None:intergenic | 50.0% | |
| GTTCTATTTGCCATGGCTGG+TGG | + | chr5.4:34146487-34146506 | MS.gene99288:CDS | 50.0% | |
| TCCGGAACCGGTACAGAAAT+AGG | - | chr5.4:34146073-34146092 | None:intergenic | 50.0% | |
| TCTATTTGCCATGGCTGGTG+GGG | + | chr5.4:34146489-34146508 | MS.gene99288:CDS | 50.0% | |
| TTTATGGGAGGTCAAGCTGC+TGG | + | chr5.4:34148187-34148206 | MS.gene99288:CDS | 50.0% | |
| TTTCATCGCTCTTCCGGAAC+CGG | - | chr5.4:34146085-34146104 | None:intergenic | 50.0% | |
| ! | AGGTGCCATAGTATGCATGC+TGG | + | chr5.4:34144412-34144431 | MS.gene99288:CDS | 50.0% |
| ! | GACCTATGTGGGACACCTTT+TGG | - | chr5.4:34146003-34146022 | None:intergenic | 50.0% |
| ! | GCTGGTCTCCTTTGTGGATT+TGG | + | chr5.4:34148151-34148170 | MS.gene99288:CDS | 50.0% |
| ! | TATATGGTGGAGAGCAAGGG+AGG | + | chr5.4:34144392-34144411 | MS.gene99288:CDS | 50.0% |
| ! | TGGTAGAGGATGGGCATTGT+TGG | + | chr5.4:34148129-34148148 | MS.gene99288:CDS | 50.0% |
| !! | CCTGCTTTGGCTTTGTATGC+AGG | - | chr5.4:34147504-34147523 | None:intergenic | 50.0% |
| !! | CCTTGTTGTTCTTGGGGACA+TGG | + | chr5.4:34144438-34144457 | MS.gene99288:CDS | 50.0% |
| !! | TTGTTGGCTGGTCTCCTTTG+TGG | + | chr5.4:34148145-34148164 | MS.gene99288:CDS | 50.0% |
| !!! | AGGAGGAGGAGTGTTCCTTT+TGG | + | chr5.4:34145627-34145646 | MS.gene99288:intron | 50.0% |
| !!! | GAGGAGTGTTCCTTTTGGGT+TGG | + | chr5.4:34145632-34145651 | MS.gene99288:intron | 50.0% |
| !!! | GGAGGAGGAGTGTTCCTTTT+GGG | + | chr5.4:34145628-34145647 | MS.gene99288:intron | 50.0% |
| ACCAGAGTCGGTCCTTGCTT+AGG | + | chr5.4:34145915-34145934 | MS.gene99288:intron | 55.0% | |
| AGTGCTAAGGCCGTGACAAG+TGG | - | chr5.4:34145805-34145824 | None:intergenic | 55.0% | |
| GCAGTGCTCATGGCATCATC+TGG | + | chr5.4:34148509-34148528 | MS.gene99288:CDS | 55.0% | |
| GGTGGGGTTGTCCTTAGCAT+TGG | + | chr5.4:34146505-34146524 | MS.gene99288:CDS | 55.0% | |
| GGTTGTGGGCATCCTAAGCA+AGG | - | chr5.4:34145930-34145949 | None:intergenic | 55.0% | |
| ! | AAGCAAGGACCGACTCTGGT+TGG | - | chr5.4:34145915-34145934 | None:intergenic | 55.0% |
| ! | AGAGGATGGGCATTGTTGGC+TGG | + | chr5.4:34148133-34148152 | MS.gene99288:CDS | 55.0% |
| ! | CGTCTTAGCCTTCCTTGACG+AGG | + | chr5.4:34145719-34145738 | MS.gene99288:intron | 55.0% |
| ! | TCCTAAGCAAGGACCGACTC+TGG | - | chr5.4:34145919-34145938 | None:intergenic | 55.0% |
| !! | CCCCAGAAAGTGCTCACAAG+TGG | - | chr5.4:34148401-34148420 | None:intergenic | 55.0% |
| !! | GCCCAAAAGGTGTCCCACAT+AGG | + | chr5.4:34145998-34146017 | MS.gene99288:intron | 55.0% |
| !! | TACCTTCCGAAGTAGCGGGT+CGG | + | chr5.4:34145975-34145994 | MS.gene99288:intron | 55.0% |
| AAGGACAACCCCACCAGCCA+TGG | - | chr5.4:34146500-34146519 | None:intergenic | 60.0% | |
| GGGTTGGGCCCTTCCACATA+AGG | + | chr5.4:34145648-34145667 | MS.gene99288:intron | 60.0% | |
| GGTTGCGCACCAACCAGAGT+CGG | + | chr5.4:34145903-34145922 | MS.gene99288:intron | 60.0% | |
| GTGGAAGGGCCCAACCCAAA+AGG | - | chr5.4:34145645-34145664 | None:intergenic | 60.0% | |
| TCCACATAAGGCCCCACCGT+CGG | + | chr5.4:34145660-34145679 | MS.gene99288:intron | 60.0% | |
| TGCAGCTGTCGCAGTGCTCA+TGG | + | chr5.4:34148499-34148518 | MS.gene99288:CDS | 60.0% | |
| ! | ACGGTGGGGCCTTATGTGGA+AGG | - | chr5.4:34145660-34145679 | None:intergenic | 60.0% |
| ! | CGGTGGGGCCTTATGTGGAA+GGG | - | chr5.4:34145659-34145678 | None:intergenic | 60.0% |
| !! | AAGAGGGCGCTTATCCCCGA+CGG | - | chr5.4:34145679-34145698 | None:intergenic | 60.0% |
| !! | ACCTTCCGAAGTAGCGGGTC+GGG | + | chr5.4:34145976-34145995 | MS.gene99288:intron | 60.0% |
| AGCAGAGCCGCACTGCTCTG+CGG | + | chr5.4:34146109-34146128 | MS.gene99288:intron | 65.0% | |
| CACATAAGGCCCCACCGTCG+GGG | + | chr5.4:34145662-34145681 | MS.gene99288:intron | 65.0% | |
| CACTGCTCTGCGGTCTGCAG+CGG | + | chr5.4:34146119-34146138 | MS.gene99288:intron | 65.0% | |
| CCACATAAGGCCCCACCGTC+GGG | + | chr5.4:34145661-34145680 | MS.gene99288:intron | 65.0% | |
| CTGCAGACCGCAGAGCAGTG+CGG | - | chr5.4:34146119-34146138 | None:intergenic | 65.0% | |
| TTGGGCCCGACCCGCTACTT+CGG | - | chr5.4:34145984-34146003 | None:intergenic | 65.0% | |
| !! | AGTAGCGGGTCGGGCCCAAA+AGG | + | chr5.4:34145985-34146004 | MS.gene99288:intron | 65.0% |
| GCCCGACCCGCTACTTCGGA+AGG | - | chr5.4:34145980-34145999 | None:intergenic | 70.0% | |
| GGCGCTTATCCCCGACGGTG+GGG | - | chr5.4:34145674-34145693 | None:intergenic | 70.0% | |
| GGGCGCTTATCCCCGACGGT+GGG | - | chr5.4:34145675-34145694 | None:intergenic | 70.0% | |
| ! | AGGGCGCTTATCCCCGACGG+TGG | - | chr5.4:34145676-34145695 | None:intergenic | 70.0% |
| ! | CCCGACGGTGGGGCCTTATG+TGG | - | chr5.4:34145664-34145683 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 34144389 | 34148544 | 34144389 | ID=MS.gene99288 |
| chr5.4 | mRNA | 34144389 | 34148544 | 34144389 | ID=MS.gene99288.t1;Parent=MS.gene99288 |
| chr5.4 | exon | 34144389 | 34144616 | 34144389 | ID=MS.gene99288.t1.exon1;Parent=MS.gene99288.t1 |
| chr5.4 | CDS | 34144389 | 34144616 | 34144389 | ID=cds.MS.gene99288.t1;Parent=MS.gene99288.t1 |
| chr5.4 | exon | 34146472 | 34146616 | 34146472 | ID=MS.gene99288.t1.exon2;Parent=MS.gene99288.t1 |
| chr5.4 | CDS | 34146472 | 34146616 | 34146472 | ID=cds.MS.gene99288.t1;Parent=MS.gene99288.t1 |
| chr5.4 | exon | 34146720 | 34146894 | 34146720 | ID=MS.gene99288.t1.exon3;Parent=MS.gene99288.t1 |
| chr5.4 | CDS | 34146720 | 34146894 | 34146720 | ID=cds.MS.gene99288.t1;Parent=MS.gene99288.t1 |
| chr5.4 | exon | 34147345 | 34147382 | 34147345 | ID=MS.gene99288.t1.exon4;Parent=MS.gene99288.t1 |
| chr5.4 | CDS | 34147345 | 34147382 | 34147345 | ID=cds.MS.gene99288.t1;Parent=MS.gene99288.t1 |
| chr5.4 | exon | 34147469 | 34147569 | 34147469 | ID=MS.gene99288.t1.exon5;Parent=MS.gene99288.t1 |
| chr5.4 | CDS | 34147469 | 34147569 | 34147469 | ID=cds.MS.gene99288.t1;Parent=MS.gene99288.t1 |
| chr5.4 | exon | 34147860 | 34148234 | 34147860 | ID=MS.gene99288.t1.exon6;Parent=MS.gene99288.t1 |
| chr5.4 | CDS | 34147860 | 34148234 | 34147860 | ID=cds.MS.gene99288.t1;Parent=MS.gene99288.t1 |
| chr5.4 | exon | 34148392 | 34148544 | 34148392 | ID=MS.gene99288.t1.exon7;Parent=MS.gene99288.t1 |
| chr5.4 | CDS | 34148392 | 34148544 | 34148392 | ID=cds.MS.gene99288.t1;Parent=MS.gene99288.t1 |
| Gene Sequence |
| Protein sequence |
