Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054684.t1 | XP_003614096.1 | 97.2 | 400 | 8 | 1 | 1 | 400 | 1 | 397 | 1.50E-213 | 751.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054684.t1 | Q9ZQ89 | 77.7 | 403 | 82 | 3 | 1 | 400 | 1 | 398 | 4.7e-171 | 602.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054684.t1 | G7JY00 | 97.2 | 400 | 8 | 1 | 1 | 400 | 1 | 397 | 1.1e-213 | 751.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054684 | MS.gene05952 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene054684 | MS.gene066513 | 0.81492 | 1.20E-51 | -1.69E-46 |
| MS.gene054684 | MS.gene071569 | 0.801001 | 1.11E-48 | -1.69E-46 |
| MS.gene054684 | MS.gene073756 | 0.807166 | 5.77E-50 | -1.69E-46 |
| MS.gene054684 | MS.gene07450 | 0.817362 | 3.43E-52 | -1.69E-46 |
| MS.gene054684 | MS.gene32801 | 0.815142 | 1.08E-51 | -1.69E-46 |
| MS.gene054684 | MS.gene33651 | 0.804162 | 2.47E-49 | -1.69E-46 |
| MS.gene054684 | MS.gene37412 | 0.82145 | 4.01E-53 | -1.69E-46 |
| MS.gene054684 | MS.gene39037 | 0.804897 | 1.73E-49 | -1.69E-46 |
| MS.gene054684 | MS.gene59540 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene054684 | MS.gene62676 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene054684 | MS.gene62677 | 0.811145 | 8.11E-51 | -1.69E-46 |
| MS.gene054684 | MS.gene73678 | 0.814125 | 1.81E-51 | -1.69E-46 |
| MS.gene054684 | MS.gene92905 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene054684 | MS.gene95509 | 0.833716 | 4.54E-56 | -1.69E-46 |
| MS.gene054684 | MS.gene99288 | 0.808999 | 2.35E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054684.t1 | MTR_5g044710 | 97.250 | 400 | 8 | 1 | 1 | 400 | 1 | 397 | 0.0 | 789 |
| MS.gene054684.t1 | MTR_5g045530 | 88.089 | 403 | 43 | 3 | 1 | 400 | 1 | 401 | 0.0 | 662 |
| MS.gene054684.t1 | MTR_5g045520 | 82.222 | 405 | 63 | 3 | 1 | 400 | 27 | 427 | 0.0 | 644 |
| MS.gene054684.t1 | MTR_5g045520 | 82.222 | 405 | 63 | 3 | 1 | 400 | 1 | 401 | 0.0 | 643 |
| MS.gene054684.t1 | MTR_5g044710 | 97.231 | 325 | 6 | 1 | 76 | 400 | 2 | 323 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054684.t1 | AT2G03530 | 77.667 | 403 | 82 | 3 | 1 | 400 | 1 | 398 | 0.0 | 615 |
| MS.gene054684.t1 | AT2G03530 | 77.667 | 403 | 82 | 3 | 1 | 400 | 1 | 398 | 0.0 | 615 |
| MS.gene054684.t1 | AT2G03590 | 76.500 | 400 | 84 | 2 | 1 | 400 | 1 | 390 | 0.0 | 604 |
| MS.gene054684.t1 | AT2G03590 | 76.500 | 400 | 84 | 2 | 1 | 400 | 1 | 390 | 0.0 | 604 |
| MS.gene054684.t1 | AT2G03530 | 77.428 | 381 | 78 | 3 | 1 | 378 | 1 | 376 | 0.0 | 582 |
| MS.gene054684.t1 | AT2G03520 | 68.642 | 405 | 118 | 3 | 1 | 400 | 1 | 401 | 0.0 | 539 |
| MS.gene054684.t1 | AT1G26440 | 67.482 | 409 | 116 | 4 | 1 | 400 | 9 | 409 | 0.0 | 527 |
| MS.gene054684.t1 | AT1G26440 | 67.482 | 409 | 116 | 4 | 1 | 400 | 9 | 409 | 0.0 | 527 |
| MS.gene054684.t1 | AT2G03530 | 77.044 | 318 | 68 | 2 | 83 | 400 | 1 | 313 | 4.14e-168 | 473 |
| MS.gene054684.t1 | AT2G03530 | 77.044 | 318 | 68 | 2 | 83 | 400 | 1 | 313 | 4.14e-168 | 473 |
| MS.gene054684.t1 | AT1G26440 | 61.275 | 408 | 107 | 5 | 1 | 400 | 9 | 373 | 1.15e-162 | 462 |
| MS.gene054684.t1 | AT1G26440 | 61.125 | 409 | 107 | 5 | 1 | 400 | 9 | 374 | 1.69e-162 | 461 |
| MS.gene054684.t1 | AT1G26440 | 67.477 | 329 | 95 | 2 | 76 | 400 | 16 | 336 | 2.32e-152 | 434 |
| MS.gene054684.t1 | AT1G26440 | 67.477 | 329 | 95 | 2 | 76 | 400 | 16 | 336 | 2.32e-152 | 434 |
| MS.gene054684.t1 | AT2G03600 | 63.158 | 342 | 103 | 5 | 1 | 336 | 1 | 325 | 7.64e-147 | 420 |
| MS.gene054684.t1 | AT2G03600 | 62.130 | 338 | 105 | 4 | 1 | 336 | 1 | 317 | 4.57e-143 | 410 |
| MS.gene054684.t1 | AT1G26440 | 55.693 | 404 | 110 | 5 | 1 | 400 | 9 | 347 | 2.83e-135 | 391 |
| MS.gene054684.t1 | AT2G03600 | 70.037 | 267 | 66 | 2 | 1 | 267 | 1 | 253 | 2.75e-132 | 380 |
| MS.gene054684.t1 | AT2G03600 | 70.037 | 267 | 66 | 2 | 1 | 267 | 1 | 253 | 2.75e-132 | 380 |
| MS.gene054684.t1 | AT1G26440 | 59.574 | 329 | 86 | 3 | 76 | 400 | 16 | 301 | 4.05e-127 | 369 |
| MS.gene054684.t1 | AT2G03600 | 64.483 | 290 | 66 | 3 | 1 | 267 | 1 | 276 | 1.32e-126 | 366 |
| MS.gene054684.t1 | AT2G03600 | 64.894 | 188 | 52 | 1 | 83 | 270 | 1 | 174 | 2.27e-78 | 239 |
Find 96 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACTTGTGAGCACTTTC+TGG | 0.038144 | 5.3:+32349147 | MS.gene054684:CDS |
| TCCAGGAGTTGGTTGCTTTC+TGG | 0.089183 | 5.3:+32347434 | MS.gene054684:CDS |
| ATCATCACTGAAGGCTTATT+TGG | 0.114560 | 5.3:+32348846 | MS.gene054684:CDS |
| TGGGAATGGCCTTCAATTTA+TGG | 0.139096 | 5.3:+32348921 | MS.gene054684:CDS |
| GCTGGTTTCCTTGTTGTTCT+TGG | 0.192853 | 5.3:+32344993 | MS.gene054684:CDS |
| AGGCAGTATAAACACTTAAA+TGG | 0.211882 | 5.3:-32348738 | None:intergenic |
| GCTGGTCTACTTTGTGGATT+TGG | 0.221208 | 5.3:+32348901 | MS.gene054684:CDS |
| CTGGTTTCCTTGTTGTTCTT+GGG | 0.222511 | 5.3:+32344994 | MS.gene054684:CDS |
| TAAGCCTTCAGTGATGATTT+TGG | 0.237344 | 5.3:-32348841 | None:intergenic |
| GGAATATCGACTTGCCTTAA+TGG | 0.249356 | 5.3:-32348342 | None:intergenic |
| ATCTAATACTGCTGATAATA+AGG | 0.260930 | 5.3:+32347488 | MS.gene054684:CDS |
| GTTATCATTGCTTTCACCTT+TGG | 0.272469 | 5.3:+32345111 | MS.gene054684:CDS |
| GCTTTCACCTTTGGTCAAAT+AGG | 0.278938 | 5.3:+32345120 | MS.gene054684:CDS |
| GCAGTGCTCATGGCATCATC+TGG | 0.290022 | 5.3:+32349260 | MS.gene054684:CDS |
| ATTCTCACCAGCATTCAATT+TGG | 0.294819 | 5.3:+32348675 | MS.gene054684:CDS |
| CTGGTCTACTTTGTGGATTT+GGG | 0.310127 | 5.3:+32348902 | MS.gene054684:CDS |
| CTGGCTATAACTTTCTTTGC+AGG | 0.319819 | 5.3:+32348637 | MS.gene054684:CDS |
| TGAAGGCTTATTTGGGAGAT+TGG | 0.320805 | 5.3:+32348854 | MS.gene054684:CDS |
| TTTCTGGTTGCAGTTTGTTT+AGG | 0.320998 | 5.3:+32347450 | MS.gene054684:CDS |
| GGCAGTATAAACACTTAAAT+GGG | 0.325531 | 5.3:-32348737 | None:intergenic |
| TCCACTTGTGAGCACTTTCT+GGG | 0.325696 | 5.3:+32349148 | MS.gene054684:CDS |
| TCAAGTATAACTGTTGTTAT+AGG | 0.331374 | 5.3:+32347249 | MS.gene054684:CDS |
| CCTTGTTGTTCTTGGGGACA+TGG | 0.348148 | 5.3:+32345001 | MS.gene054684:CDS |
| GGGAATGGCCTTCAATTTAT+GGG | 0.353628 | 5.3:+32348922 | MS.gene054684:CDS |
| TTCTATTTGCAATGGCTGGT+GGG | 0.362399 | 5.3:+32347148 | MS.gene054684:CDS |
| AAACACTGCAGTTCCTGCTT+TGG | 0.374306 | 5.3:-32348294 | None:intergenic |
| CAGTGGAACACTTTAGATAA+AGG | 0.378993 | 5.3:+32348709 | MS.gene054684:CDS |
| GGAAACCAGCATGCATACTA+TGG | 0.384971 | 5.3:-32344980 | None:intergenic |
| GATTCAAAGGATTTAGAGAA+TGG | 0.387178 | 5.3:+32348257 | MS.gene054684:CDS |
| AGTGGAACACTTTAGATAAA+GGG | 0.388576 | 5.3:+32348710 | MS.gene054684:CDS |
| TTGTTGGCTGGTCTACTTTG+TGG | 0.391876 | 5.3:+32348895 | MS.gene054684:CDS |
| GAAAGTTGAGACAAGAAGTT+AGG | 0.396418 | 5.3:-32345153 | None:intergenic |
| TCATCACTGAAGGCTTATTT+GGG | 0.396436 | 5.3:+32348847 | MS.gene054684:CDS |
| AGAGGTTGGGCATTGTTGGC+TGG | 0.396797 | 5.3:+32348883 | MS.gene054684:CDS |
| CTTCTTGTCTCAACTTTCTC+AGG | 0.400214 | 5.3:+32345158 | MS.gene054684:CDS |
| TGGTAGAGGTTGGGCATTGT+TGG | 0.400672 | 5.3:+32348879 | MS.gene054684:CDS |
| TTTGGAAAGAGCACTTTCAT+TGG | 0.402064 | 5.3:+32348613 | MS.gene054684:CDS |
| AGTTCAAGACAGGGTGATAA+AGG | 0.402264 | 5.3:-32348816 | None:intergenic |
| TCTGTTCTATTTGCAATGGC+TGG | 0.404500 | 5.3:+32347144 | MS.gene054684:CDS |
| ATTGAATGCTGGTGAGAATA+GGG | 0.408151 | 5.3:-32348671 | None:intergenic |
| TTAAACCATTTGCAGGTGTT+TGG | 0.421342 | 5.3:+32348595 | MS.gene054684:intron |
| CTACTTTGTGGATTTGGGAA+TGG | 0.422579 | 5.3:+32348907 | MS.gene054684:CDS |
| AATTGAATGCTGGTGAGAAT+AGG | 0.431496 | 5.3:-32348672 | None:intergenic |
| TTGGGAGATTGGAATGGTAG+AGG | 0.433035 | 5.3:+32348865 | MS.gene054684:CDS |
| TTTGTCCACTCAGTATGCTT+GGG | 0.439898 | 5.3:+32347191 | MS.gene054684:CDS |
| GCAGTGTTTCTTATAGAACT+TGG | 0.441772 | 5.3:+32348308 | MS.gene054684:CDS |
| ATTTGTCCACTCAGTATGCT+TGG | 0.448183 | 5.3:+32347190 | MS.gene054684:CDS |
| GGTGGGGTTGTCCTTAGCAT+TGG | 0.454459 | 5.3:+32347165 | MS.gene054684:CDS |
| CTACACCATCACTAATCTCT+TGG | 0.456636 | 5.3:+32345083 | MS.gene054684:CDS |
| AGTGATGGTGTAGTCAAGAT+AGG | 0.456695 | 5.3:-32345073 | None:intergenic |
| AGGAGAACATATACATTGCT+TGG | 0.456969 | 5.3:+32349206 | MS.gene054684:CDS |
| ACCAGAAAGCAACCAACTCC+TGG | 0.457479 | 5.3:-32347435 | None:intergenic |
| GCCTTCTGTTCTATTTGCAA+TGG | 0.461913 | 5.3:+32347140 | MS.gene054684:CDS |
| GTTCTATTTGCAATGGCTGG+TGG | 0.473832 | 5.3:+32347147 | MS.gene054684:CDS |
| CTGTGATGACTTTATTAGAA+AGG | 0.474222 | 5.3:+32345028 | MS.gene054684:CDS |
| CTTGTCCTCCCATAAATTGA+AGG | 0.476158 | 5.3:-32348930 | None:intergenic |
| AATGTATATGGTGGAGAGCA+AGG | 0.477899 | 5.3:+32344951 | None:intergenic |
| GAAGGTGATGTTTAGAATGA+TGG | 0.478524 | 5.3:-32348794 | None:intergenic |
| GAGATTGGAATGGTAGAGGT+TGG | 0.480321 | 5.3:+32348869 | MS.gene054684:CDS |
| AAAGAGCACTTTCATTGGAC+TGG | 0.489911 | 5.3:+32348618 | MS.gene054684:CDS |
| TGCAGCTGTCGCAGTGCTCA+TGG | 0.495704 | 5.3:+32349250 | MS.gene054684:CDS |
| AGATTGGAATGGTAGAGGTT+GGG | 0.498339 | 5.3:+32348870 | MS.gene054684:CDS |
| TGGTTTCCTTGTTGTTCTTG+GGG | 0.501836 | 5.3:+32344995 | MS.gene054684:CDS |
| AATATAAACAGATGATTCAA+AGG | 0.505153 | 5.3:+32348244 | MS.gene054684:intron |
| CAGTGTTTCTTATAGAACTT+GGG | 0.511343 | 5.3:+32348309 | MS.gene054684:CDS |
| TCTATTTGCAATGGCTGGTG+GGG | 0.519530 | 5.3:+32347149 | MS.gene054684:CDS |
| GGAGAACATATACATTGCTT+GGG | 0.522179 | 5.3:+32349207 | MS.gene054684:CDS |
| TCTAATAAAGTCATCACAGC+TGG | 0.533162 | 5.3:-32345024 | None:intergenic |
| TAGTCAAGATAGGTGTGTTG+AGG | 0.533891 | 5.3:-32345063 | None:intergenic |
| TTTGTTGCCAAATTGAATGC+TGG | 0.537646 | 5.3:-32348682 | None:intergenic |
| GCTTATTTGGGAGATTGGAA+TGG | 0.541985 | 5.3:+32348859 | MS.gene054684:CDS |
| CCCCAGAAAGTGCTCACAAG+TGG | 0.548827 | 5.3:-32349149 | None:intergenic |
| CTTTATCTAAAGTGTTCCAC+TGG | 0.550283 | 5.3:-32348708 | None:intergenic |
| CAGTGCTCATGGCATCATCT+GGG | 0.551445 | 5.3:+32349261 | MS.gene054684:CDS |
| GCCATTGCAAATAGAACAGA+AGG | 0.555972 | 5.3:-32347141 | None:intergenic |
| AGTGCAAACAAAGCCAAAGC+AGG | 0.564487 | 5.3:+32348281 | MS.gene054684:CDS |
| TTTATGGGAGGACAAGCTGC+TGG | 0.568138 | 5.3:+32348937 | MS.gene054684:CDS |
| CCACTTGTGAGCACTTTCTG+GGG | 0.568469 | 5.3:+32349149 | MS.gene054684:CDS |
| TGGACAAATTTCCAATGCTA+AGG | 0.572809 | 5.3:-32347176 | None:intergenic |
| ATGTATATGGTGGAGAGCAA+GGG | 0.579654 | 5.3:+32344952 | MS.gene054684:CDS |
| ATCAGTGCCTATTTGACCAA+AGG | 0.596958 | 5.3:-32345127 | None:intergenic |
| GTGGAACACTTTAGATAAAG+GGG | 0.598850 | 5.3:+32348711 | MS.gene054684:CDS |
| CAAGACAGGGTGATAAAGGA+AGG | 0.599842 | 5.3:-32348812 | None:intergenic |
| CTTACCAAAATCATCACTGA+AGG | 0.604231 | 5.3:+32348837 | MS.gene054684:CDS |
| TGATAATAAGGCTAAGCTCA+AGG | 0.610741 | 5.3:+32347500 | MS.gene054684:CDS |
| AGGTGCCATAGTATGCATGC+TGG | 0.613318 | 5.3:+32344975 | MS.gene054684:CDS |
| GCGAGTATAGAAAATCATCA+AGG | 0.624685 | 5.3:+32349186 | MS.gene054684:CDS |
| AGCAGCCAAGAGATTAGTGA+TGG | 0.628687 | 5.3:-32345088 | None:intergenic |
| ATGACTTTATTAGAAAGGAG+AGG | 0.628993 | 5.3:+32345033 | MS.gene054684:CDS |
| CCATGTCCCCAAGAACAACA+AGG | 0.634994 | 5.3:-32345001 | None:intergenic |
| TATATGGTGGAGAGCAAGGG+AGG | 0.646098 | 5.3:+32344955 | MS.gene054684:CDS |
| ATTTGGCAACAAATGACCAG+TGG | 0.650978 | 5.3:+32348692 | MS.gene054684:CDS |
| AATGGCCTTCAATTTATGGG+AGG | 0.654553 | 5.3:+32348925 | MS.gene054684:CDS |
| ACTTTGAATGAAGAAAGTAA+AGG | 0.657392 | 5.3:+32348163 | MS.gene054684:CDS |
| GCAGTATAAACACTTAAATG+GGG | 0.664993 | 5.3:-32348736 | None:intergenic |
| AAAAGCCCAAGCATACTGAG+TGG | 0.720310 | 5.3:-32347196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAAAAAAATATGCTT+TGG | - | chr5.3:32346677-32346696 | None:intergenic | 10.0% |
| !! | TATATACAAACATAAATAAT+AGG | + | chr5.3:32345276-32345295 | MS.gene054684:intron | 10.0% |
| !! | TATTAAAAAAAATATGCTTT+GGG | - | chr5.3:32346676-32346695 | None:intergenic | 10.0% |
| !!! | AAATGATTTTTTTAACAAAA+TGG | + | chr5.3:32347958-32347977 | MS.gene054684:intron | 10.0% |
| !!! | ATTTAGAAAAAAATAGATTT+TGG | + | chr5.3:32347898-32347917 | MS.gene054684:intron | 10.0% |
| !!! | TAAAATATTTTAATACAACT+AGG | - | chr5.3:32345784-32345803 | None:intergenic | 10.0% |
| !!! | TAAGAAAATGTTTATTTTTA+GGG | + | chr5.3:32346025-32346044 | MS.gene054684:intron | 10.0% |
| !!! | TGACAAAAAATTTAAATTTT+GGG | - | chr5.3:32346908-32346927 | None:intergenic | 10.0% |
| !!! | TTAAGAAAATGTTTATTTTT+AGG | + | chr5.3:32346024-32346043 | MS.gene054684:intron | 10.0% |
| !!! | TTGTTAAAAAAATCATTTTT+AGG | - | chr5.3:32347956-32347975 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAAATAGATTTTG+AGG | + | chr5.3:32347754-32347773 | MS.gene054684:intron | 10.0% |
| !! | CATCTGTTTATATTAATAAA+GGG | - | chr5.3:32348238-32348257 | None:intergenic | 15.0% |
| !! | GTATTAAAAAAATTAATGAC+TGG | - | chr5.3:32345944-32345963 | None:intergenic | 15.0% |
| !! | TCATCTGTTTATATTAATAA+AGG | - | chr5.3:32348239-32348258 | None:intergenic | 15.0% |
| !!! | ATATTTTAAACGATAAAAAG+AGG | + | chr5.3:32345796-32345815 | MS.gene054684:intron | 15.0% |
| !!! | ATTTTGTTCTAAATTACTTT+TGG | + | chr5.3:32347669-32347688 | MS.gene054684:intron | 15.0% |
| !!! | ATTTTTTGGCTTAATAAATT+TGG | - | chr5.3:32345485-32345504 | None:intergenic | 15.0% |
| !!! | CTGACAAAAAATTTAAATTT+TGG | - | chr5.3:32346909-32346928 | None:intergenic | 15.0% |
| !!! | TCTATTTTTTTCTAAATACA+AGG | - | chr5.3:32347895-32347914 | None:intergenic | 15.0% |
| !!! | TTTTCTATGTTAATTCTAAA+TGG | + | chr5.3:32345198-32345217 | MS.gene054684:intron | 15.0% |
| !! | AAAAAACACAAACTCTTATT+TGG | - | chr5.3:32345454-32345473 | None:intergenic | 20.0% |
| !! | AAAAACAGAAGAAAAAATCT+AGG | + | chr5.3:32346473-32346492 | MS.gene054684:intron | 20.0% |
| !! | AAAGTAAAGGTAACAATATT+TGG | + | chr5.3:32348176-32348195 | MS.gene054684:intron | 20.0% |
| !! | AATATAAACAGATGATTCAA+AGG | + | chr5.3:32348244-32348263 | MS.gene054684:intron | 20.0% |
| !! | TAGAAAAATAAAGACAAACA+CGG | + | chr5.3:32348465-32348484 | MS.gene054684:intron | 20.0% |
| !! | TCAAAAAAATCCAAAACAAA+CGG | + | chr5.3:32348055-32348074 | MS.gene054684:intron | 20.0% |
| !! | TGACAATCACAAATAAAAAA+TGG | + | chr5.3:32346974-32346993 | MS.gene054684:intron | 20.0% |
| !! | TTGAAAAATACGAAAGAAAT+GGG | - | chr5.3:32345745-32345764 | None:intergenic | 20.0% |
| !!! | ATGAAAAACATTTAACTTGT+AGG | + | chr5.3:32346211-32346230 | MS.gene054684:intron | 20.0% |
| !!! | ATGATTGTAGTTTTAAACTT+CGG | - | chr5.3:32348416-32348435 | None:intergenic | 20.0% |
| !!! | ATTTTTTATTTGTGATTGTC+AGG | - | chr5.3:32346975-32346994 | None:intergenic | 20.0% |
| !!! | ATTTTTTTATTGGGCTTATT+TGG | - | chr5.3:32346182-32346201 | None:intergenic | 20.0% |
| !!! | CACAACATTGAATTATTTTT+TGG | + | chr5.3:32347380-32347399 | MS.gene054684:CDS | 20.0% |
| !!! | CTAAATTACTTTTGGTTAAT+TGG | + | chr5.3:32347677-32347696 | MS.gene054684:intron | 20.0% |
| !!! | CTGACAAAAAATTCAAATTT+TGG | - | chr5.3:32346807-32346826 | None:intergenic | 20.0% |
| !!! | TTGATGATATTTTTAGTCAT+GGG | + | chr5.3:32345243-32345262 | MS.gene054684:intron | 20.0% |
| !!! | TTTTTTATTTGTGATTGTCA+GGG | - | chr5.3:32346974-32346993 | None:intergenic | 20.0% |
| ! | AAAAAAATCTGTTGCATTCT+TGG | + | chr5.3:32346419-32346438 | MS.gene054684:intron | 25.0% |
| ! | AACTATGATTTAGACAATGA+AGG | + | chr5.3:32348547-32348566 | MS.gene054684:intron | 25.0% |
| ! | AAGGTTCATACAAATACATT+TGG | + | chr5.3:32345981-32346000 | MS.gene054684:intron | 25.0% |
| ! | AATTTGAGCCAAAAAATAGT+TGG | - | chr5.3:32345427-32345446 | None:intergenic | 25.0% |
| ! | ACATAATTTAATCGATATGG+TGG | - | chr5.3:32345887-32345906 | None:intergenic | 25.0% |
| ! | ACTTTGAATGAAGAAAGTAA+AGG | + | chr5.3:32348163-32348182 | MS.gene054684:CDS | 25.0% |
| ! | AGAGACTGAAAAATAAAAGA+AGG | - | chr5.3:32348761-32348780 | None:intergenic | 25.0% |
| ! | AGTCCTTAAAAACTAAAACA+GGG | + | chr5.3:32346825-32346844 | MS.gene054684:intron | 25.0% |
| ! | ATAGCTACTACTAATATGAT+TGG | - | chr5.3:32347586-32347605 | None:intergenic | 25.0% |
| ! | ATCTAATACTGCTGATAATA+AGG | + | chr5.3:32347488-32347507 | MS.gene054684:CDS | 25.0% |
| ! | CATAGTTCCTAAAAAATGAT+TGG | - | chr5.3:32346611-32346630 | None:intergenic | 25.0% |
| ! | GTGACATAATTTAATCGATA+TGG | - | chr5.3:32345890-32345909 | None:intergenic | 25.0% |
| ! | GTTGAAAAATACGAAAGAAA+TGG | - | chr5.3:32345746-32345765 | None:intergenic | 25.0% |
| ! | TAATAAGGCAAACAATAAGA+CGG | + | chr5.3:32346328-32346347 | MS.gene054684:intron | 25.0% |
| ! | TCAAGTATAACTGTTGTTAT+AGG | + | chr5.3:32347249-32347268 | MS.gene054684:CDS | 25.0% |
| ! | TGTTAATTCTAAATGGAAAG+AGG | + | chr5.3:32345205-32345224 | MS.gene054684:intron | 25.0% |
| ! | TTCATACAAATACATTTGGA+CGG | + | chr5.3:32345985-32346004 | MS.gene054684:intron | 25.0% |
| ! | TTTGCATTCAAACTCTTATT+TGG | - | chr5.3:32345634-32345653 | None:intergenic | 25.0% |
| !! | AATCTCTCATGCTTTTAATA+AGG | + | chr5.3:32346313-32346332 | MS.gene054684:intron | 25.0% |
| !! | ACTTTCTCTTGTAAGTTTTA+AGG | + | chr5.3:32345962-32345981 | MS.gene054684:intron | 25.0% |
| !! | GCTTAATCATTTCTGATTTT+GGG | + | chr5.3:32347716-32347735 | MS.gene054684:intron | 25.0% |
| !! | TATTAATAAAGGGCATGAAT+AGG | - | chr5.3:32348228-32348247 | None:intergenic | 25.0% |
| !! | TGCTTAATCATTTCTGATTT+TGG | + | chr5.3:32347715-32347734 | MS.gene054684:intron | 25.0% |
| !! | TTTTATTCAGATACTCCATT+TGG | + | chr5.3:32349058-32349077 | MS.gene054684:intron | 25.0% |
| !!! | AAAAACATTTAACTTGTAGG+AGG | + | chr5.3:32346214-32346233 | MS.gene054684:intron | 25.0% |
| !!! | AAAATCTGTTATTTTTCCAG+GGG | + | chr5.3:32348127-32348146 | MS.gene054684:intron | 25.0% |
| !!! | AGTGCCTTTTTAAGTATTTT+GGG | + | chr5.3:32346881-32346900 | MS.gene054684:intron | 25.0% |
| !!! | CAAAATCTGTTATTTTTCCA+GGG | + | chr5.3:32348126-32348145 | MS.gene054684:intron | 25.0% |
| !!! | CAAACTCTTATTTGGTTTTT+AGG | - | chr5.3:32345626-32345645 | None:intergenic | 25.0% |
| !!! | CTTGATGATATTTTTAGTCA+TGG | + | chr5.3:32345242-32345261 | MS.gene054684:intron | 25.0% |
| !!! | GCTTTCTTTACACAATTTTT+TGG | - | chr5.3:32345499-32345518 | None:intergenic | 25.0% |
| !!! | TAGTGCCTTTTTAAGTATTT+TGG | + | chr5.3:32346880-32346899 | MS.gene054684:intron | 25.0% |
| !!! | TCTTATTTGGTTTTTAGGAA+GGG | - | chr5.3:32345621-32345640 | None:intergenic | 25.0% |
| AAAAAACTGAGAGTGGAATA+TGG | + | chr5.3:32346371-32346390 | MS.gene054684:intron | 30.0% | |
| AAAAACTGAGAGTGGAATAT+GGG | + | chr5.3:32346372-32346391 | MS.gene054684:intron | 30.0% | |
| AACAGAGAGAAAAAATAAGC+TGG | + | chr5.3:32345659-32345678 | MS.gene054684:intron | 30.0% | |
| AACTTTGTTGAATTTGTCAC+AGG | + | chr5.3:32347357-32347376 | MS.gene054684:intron | 30.0% | |
| AATAAGGCAAACAATAAGAC+GGG | + | chr5.3:32346329-32346348 | MS.gene054684:intron | 30.0% | |
| AATTCAGCAGAATTCAATAC+TGG | - | chr5.3:32347337-32347356 | None:intergenic | 30.0% | |
| ACGGAAAAACGATAAATACA+AGG | + | chr5.3:32345529-32345548 | MS.gene054684:intron | 30.0% | |
| ACGTATATTTCGCTATTTGA+AGG | + | chr5.3:32349103-32349122 | MS.gene054684:intron | 30.0% | |
| AGGCAGTATAAACACTTAAA+TGG | - | chr5.3:32348741-32348760 | None:intergenic | 30.0% | |
| AGTCCTTAAAAACTAAAACC+GGG | + | chr5.3:32346927-32346946 | MS.gene054684:intron | 30.0% | |
| AGTGGAACACTTTAGATAAA+GGG | + | chr5.3:32348710-32348729 | MS.gene054684:CDS | 30.0% | |
| AGTTCGTGAAAATTTCAATG+AGG | - | chr5.3:32348366-32348385 | None:intergenic | 30.0% | |
| ATAGTCATAATCCAAGACAA+AGG | - | chr5.3:32348083-32348102 | None:intergenic | 30.0% | |
| ATGACTTTATTAGAAAGGAG+AGG | + | chr5.3:32345033-32345052 | MS.gene054684:CDS | 30.0% | |
| CAGTCCTTAAAAACTAAAAC+AGG | + | chr5.3:32346824-32346843 | MS.gene054684:intron | 30.0% | |
| CAGTCCTTAAAAACTAAAAC+CGG | + | chr5.3:32346824-32346843 | MS.gene054684:intron | 30.0% | |
| CAGTGTTTCTTATAGAACTT+GGG | + | chr5.3:32348309-32348328 | MS.gene054684:CDS | 30.0% | |
| CTGTGATGACTTTATTAGAA+AGG | + | chr5.3:32345028-32345047 | MS.gene054684:CDS | 30.0% | |
| GATTCAAAGGATTTAGAGAA+TGG | + | chr5.3:32348257-32348276 | MS.gene054684:CDS | 30.0% | |
| GCAGTATAAACACTTAAATG+GGG | - | chr5.3:32348739-32348758 | None:intergenic | 30.0% | |
| GGCAGTATAAACACTTAAAT+GGG | - | chr5.3:32348740-32348759 | None:intergenic | 30.0% | |
| TACAAGGTACAGTATATATG+CGG | + | chr5.3:32345545-32345564 | MS.gene054684:intron | 30.0% | |
| TAGTCATAATCCAAGACAAA+GGG | - | chr5.3:32348082-32348101 | None:intergenic | 30.0% | |
| TGGGAAAAAAAGATCCATTA+AGG | + | chr5.3:32348328-32348347 | MS.gene054684:CDS | 30.0% | |
| ! | ACATAACTTTTCTTTCAGTG+AGG | + | chr5.3:32349016-32349035 | MS.gene054684:intron | 30.0% |
| ! | ATAACTTTTCTTTCAGTGAG+GGG | + | chr5.3:32349018-32349037 | MS.gene054684:intron | 30.0% |
| ! | CATAACTTTTCTTTCAGTGA+GGG | + | chr5.3:32349017-32349036 | MS.gene054684:intron | 30.0% |
| ! | CCTGGAAAAATAACAGATTT+TGG | - | chr5.3:32348128-32348147 | None:intergenic | 30.0% |
| ! | TTTTCCACTTTCTTCTTTGT+GGG | + | chr5.3:32345703-32345722 | MS.gene054684:intron | 30.0% |
| ! | TTTTTCCACTTTCTTCTTTG+TGG | + | chr5.3:32345702-32345721 | MS.gene054684:intron | 30.0% |
| !! | ATTTTGGTAAGTTCAAGACA+GGG | - | chr5.3:32348828-32348847 | None:intergenic | 30.0% |
| !! | TAGATTTTGGAAAAGCTACT+TGG | + | chr5.3:32347911-32347930 | MS.gene054684:intron | 30.0% |
| !!! | AAATCTGTTATTTTTCCAGG+GGG | + | chr5.3:32348128-32348147 | MS.gene054684:intron | 30.0% |
| !!! | ACTCCCTGTTTTAGTTTTTA+AGG | - | chr5.3:32346831-32346850 | None:intergenic | 30.0% |
| !!! | CCAAAATCTGTTATTTTTCC+AGG | + | chr5.3:32348125-32348144 | MS.gene054684:intron | 30.0% |
| !!! | CTCTTATTTGGTTTTTAGGA+AGG | - | chr5.3:32345622-32345641 | None:intergenic | 30.0% |
| !!! | GTGCCTTTTTAAGTATTTTG+GGG | + | chr5.3:32346882-32346901 | MS.gene054684:intron | 30.0% |
| !!! | TCACTCTCCAATCATTTTTT+AGG | + | chr5.3:32346601-32346620 | MS.gene054684:intron | 30.0% |
| !!! | TCCTTCATCCAACTATTTTT+TGG | + | chr5.3:32345416-32345435 | MS.gene054684:intron | 30.0% |
| AAAACTGAGAGTGGAATATG+GGG | + | chr5.3:32346373-32346392 | MS.gene054684:intron | 35.0% | |
| AATTGAATGCTGGTGAGAAT+AGG | - | chr5.3:32348675-32348694 | None:intergenic | 35.0% | |
| AGGAGAACATATACATTGCT+TGG | + | chr5.3:32349206-32349225 | MS.gene054684:CDS | 35.0% | |
| ATAAGGCAAACAATAAGACG+GGG | + | chr5.3:32346330-32346349 | MS.gene054684:intron | 35.0% | |
| ATCATCACTGAAGGCTTATT+TGG | + | chr5.3:32348846-32348865 | MS.gene054684:CDS | 35.0% | |
| ATGTAGCAAAAAACTGAGAG+TGG | + | chr5.3:32346364-32346383 | MS.gene054684:intron | 35.0% | |
| ATTCTCACCAGCATTCAATT+TGG | + | chr5.3:32348675-32348694 | MS.gene054684:CDS | 35.0% | |
| ATTGAATGCTGGTGAGAATA+GGG | - | chr5.3:32348674-32348693 | None:intergenic | 35.0% | |
| CAACCTCTATCGTATATATG+TGG | + | chr5.3:32345583-32345602 | MS.gene054684:intron | 35.0% | |
| CACTTAGTGAAATTGACTAG+AGG | - | chr5.3:32345860-32345879 | None:intergenic | 35.0% | |
| CAGCTTATAATAGCAAAGAG+AGG | + | chr5.3:32345368-32345387 | MS.gene054684:intron | 35.0% | |
| CAGTGGAACACTTTAGATAA+AGG | + | chr5.3:32348709-32348728 | MS.gene054684:CDS | 35.0% | |
| CTGCAAATGGTTTAACACAA+CGG | - | chr5.3:32348590-32348609 | None:intergenic | 35.0% | |
| CTTACCAAAATCATCACTGA+AGG | + | chr5.3:32348837-32348856 | MS.gene054684:CDS | 35.0% | |
| GAAAGTTGAGACAAGAAGTT+AGG | - | chr5.3:32345156-32345175 | None:intergenic | 35.0% | |
| GATAAATTGCTCTGCTTCAT+TGG | + | chr5.3:32346746-32346765 | MS.gene054684:intron | 35.0% | |
| GCAGTGTTTCTTATAGAACT+TGG | + | chr5.3:32348308-32348327 | MS.gene054684:CDS | 35.0% | |
| GCCAAAAAATAGTTGGATGA+AGG | - | chr5.3:32345420-32345439 | None:intergenic | 35.0% | |
| GCGAGTATAGAAAATCATCA+AGG | + | chr5.3:32349186-32349205 | MS.gene054684:CDS | 35.0% | |
| GGAGAACATATACATTGCTT+GGG | + | chr5.3:32349207-32349226 | MS.gene054684:CDS | 35.0% | |
| GTGGAACACTTTAGATAAAG+GGG | + | chr5.3:32348711-32348730 | MS.gene054684:CDS | 35.0% | |
| GTTATCATTGCTTTCACCTT+TGG | + | chr5.3:32345111-32345130 | MS.gene054684:CDS | 35.0% | |
| GTTCCACATATATACGATAG+AGG | - | chr5.3:32345589-32345608 | None:intergenic | 35.0% | |
| TCATCACTGAAGGCTTATTT+GGG | + | chr5.3:32348847-32348866 | MS.gene054684:CDS | 35.0% | |
| TCTAATAAAGTCATCACAGC+TGG | - | chr5.3:32345027-32345046 | None:intergenic | 35.0% | |
| TGATAATAAGGCTAAGCTCA+AGG | + | chr5.3:32347500-32347519 | MS.gene054684:CDS | 35.0% | |
| TGCGTATATTGAAGTCCAAA+TGG | - | chr5.3:32349076-32349095 | None:intergenic | 35.0% | |
| TGGACAAATTTCCAATGCTA+AGG | - | chr5.3:32347179-32347198 | None:intergenic | 35.0% | |
| TTAAACCATTTGCAGGTGTT+TGG | + | chr5.3:32348595-32348614 | MS.gene054684:intron | 35.0% | |
| TTTGTTGCCAAATTGAATGC+TGG | - | chr5.3:32348685-32348704 | None:intergenic | 35.0% | |
| ! | AAAGAAAGCACAAACTTGGA+CGG | + | chr5.3:32345510-32345529 | MS.gene054684:intron | 35.0% |
| ! | AAAGCTGAGATTCTTTTTCC+AGG | + | chr5.3:32347417-32347436 | MS.gene054684:CDS | 35.0% |
| ! | CTTTATCTAAAGTGTTCCAC+TGG | - | chr5.3:32348711-32348730 | None:intergenic | 35.0% |
| ! | GAAAGTGGAAAAACCTGTTT+TGG | - | chr5.3:32345695-32345714 | None:intergenic | 35.0% |
| ! | GAAGGTGATGTTTAGAATGA+TGG | - | chr5.3:32348797-32348816 | None:intergenic | 35.0% |
| ! | GAATGTGTGATTTTTGATGC+AGG | + | chr5.3:32347110-32347129 | MS.gene054684:intron | 35.0% |
| ! | GTGTAAAGAAAGCACAAACT+TGG | + | chr5.3:32345506-32345525 | MS.gene054684:intron | 35.0% |
| ! | TAAGCCTTCAGTGATGATTT+TGG | - | chr5.3:32348844-32348863 | None:intergenic | 35.0% |
| !! | AATACGAAAGAAATGGGTTG+AGG | - | chr5.3:32345739-32345758 | None:intergenic | 35.0% |
| !! | ATACGAAAGAAATGGGTTGA+GGG | - | chr5.3:32345738-32345757 | None:intergenic | 35.0% |
| !! | GATTTTGGTAAGTTCAAGAC+AGG | - | chr5.3:32348829-32348848 | None:intergenic | 35.0% |
| !! | GGCCAACAAATTTGTTAAGA+CGG | + | chr5.3:32346948-32346967 | MS.gene054684:intron | 35.0% |
| !! | TCTTAACAAATTTGTTGGCC+CGG | - | chr5.3:32346948-32346967 | None:intergenic | 35.0% |
| !! | TTTCTGGTTGCAGTTTGTTT+AGG | + | chr5.3:32347450-32347469 | MS.gene054684:CDS | 35.0% |
| !! | TTTGGAAAGAGCACTTTCAT+TGG | + | chr5.3:32348613-32348632 | MS.gene054684:CDS | 35.0% |
| !!! | TTTTTAGGAAGGGTGTTTTG+AGG | - | chr5.3:32345611-32345630 | None:intergenic | 35.0% |
| AAACTGAGAGTGGAATATGG+GGG | + | chr5.3:32346374-32346393 | MS.gene054684:intron | 40.0% | |
| AACCACACACTCTGTAATCA+AGG | - | chr5.3:32346778-32346797 | None:intergenic | 40.0% | |
| AATGGCCTTCAATTTATGGG+AGG | + | chr5.3:32348925-32348944 | MS.gene054684:CDS | 40.0% | |
| AGATTGGAATGGTAGAGGTT+GGG | + | chr5.3:32348870-32348889 | MS.gene054684:CDS | 40.0% | |
| AGTAGATAAATTAGTCCCCC+TGG | - | chr5.3:32348146-32348165 | None:intergenic | 40.0% | |
| AGTTCAAGACAGGGTGATAA+AGG | - | chr5.3:32348819-32348838 | None:intergenic | 40.0% | |
| ATACAAGGAGCTCAAGTGTA+AGG | - | chr5.3:32347880-32347899 | None:intergenic | 40.0% | |
| ATCAGTGCCTATTTGACCAA+AGG | - | chr5.3:32345130-32345149 | None:intergenic | 40.0% | |
| ATGACCCACAAAGAAGAAAG+TGG | - | chr5.3:32345710-32345729 | None:intergenic | 40.0% | |
| ATTACAGAGTGTGTGGTTGT+GGG | + | chr5.3:32346780-32346799 | MS.gene054684:intron | 40.0% | |
| ATTTGGCAACAAATGACCAG+TGG | + | chr5.3:32348692-32348711 | MS.gene054684:CDS | 40.0% | |
| ATTTGTCCACTCAGTATGCT+TGG | + | chr5.3:32347190-32347209 | MS.gene054684:CDS | 40.0% | |
| CGTTGTGTTAAACCATTTGC+AGG | + | chr5.3:32348588-32348607 | MS.gene054684:intron | 40.0% | |
| CTACACCATCACTAATCTCT+TGG | + | chr5.3:32345083-32345102 | MS.gene054684:CDS | 40.0% | |
| CTACTTTGTGGATTTGGGAA+TGG | + | chr5.3:32348907-32348926 | MS.gene054684:CDS | 40.0% | |
| CTGGCTATAACTTTCTTTGC+AGG | + | chr5.3:32348637-32348656 | MS.gene054684:CDS | 40.0% | |
| CTGGTCTACTTTGTGGATTT+GGG | + | chr5.3:32348902-32348921 | MS.gene054684:CDS | 40.0% | |
| CTTCCCCTCTTCTATCTATA+TGG | + | chr5.3:32346648-32346667 | MS.gene054684:intron | 40.0% | |
| CTTCTTGTCTCAACTTTCTC+AGG | + | chr5.3:32345158-32345177 | MS.gene054684:CDS | 40.0% | |
| GCCATTGCAAATAGAACAGA+AGG | - | chr5.3:32347144-32347163 | None:intergenic | 40.0% | |
| GCCTTCTGTTCTATTTGCAA+TGG | + | chr5.3:32347140-32347159 | MS.gene054684:CDS | 40.0% | |
| GCTCCATATAGATAGAAGAG+GGG | - | chr5.3:32346654-32346673 | None:intergenic | 40.0% | |
| GCTTATTTGGGAGATTGGAA+TGG | + | chr5.3:32348859-32348878 | MS.gene054684:CDS | 40.0% | |
| GCTTTCACCTTTGGTCAAAT+AGG | + | chr5.3:32345120-32345139 | MS.gene054684:CDS | 40.0% | |
| GGCCGTCTTAACAAATTTGT+TGG | - | chr5.3:32346953-32346972 | None:intergenic | 40.0% | |
| GGCTCCATATAGATAGAAGA+GGG | - | chr5.3:32346655-32346674 | None:intergenic | 40.0% | |
| GGGAATGGCCTTCAATTTAT+GGG | + | chr5.3:32348922-32348941 | MS.gene054684:CDS | 40.0% | |
| GGGCCCCAAAATACTTAAAA+AGG | - | chr5.3:32346888-32346907 | None:intergenic | 40.0% | |
| TACAAGGAGCTCAAGTGTAA+GGG | - | chr5.3:32347879-32347898 | None:intergenic | 40.0% | |
| TAGTCAAGATAGGTGTGTTG+AGG | - | chr5.3:32345066-32345085 | None:intergenic | 40.0% | |
| TCTGTTCTATTTGCAATGGC+TGG | + | chr5.3:32347144-32347163 | MS.gene054684:CDS | 40.0% | |
| TCTTTCCAAACACCTGCAAA+TGG | - | chr5.3:32348603-32348622 | None:intergenic | 40.0% | |
| TGAAGGCTTATTTGGGAGAT+TGG | + | chr5.3:32348854-32348873 | MS.gene054684:CDS | 40.0% | |
| TGGCAAAGAGAATCCAAAAC+AGG | + | chr5.3:32345679-32345698 | MS.gene054684:intron | 40.0% | |
| TGGGAATGGCCTTCAATTTA+TGG | + | chr5.3:32348921-32348940 | MS.gene054684:CDS | 40.0% | |
| TTCTATTTGCAATGGCTGGT+GGG | + | chr5.3:32347148-32347167 | MS.gene054684:CDS | 40.0% | |
| TTGTCTCAACTTTCTCAGGT+AGG | + | chr5.3:32345162-32345181 | MS.gene054684:intron | 40.0% | |
| TTTGTCCACTCAGTATGCTT+GGG | + | chr5.3:32347191-32347210 | MS.gene054684:CDS | 40.0% | |
| ! | AGTGATGGTGTAGTCAAGAT+AGG | - | chr5.3:32345076-32345095 | None:intergenic | 40.0% |
| ! | ATGTATATGGTGGAGAGCAA+GGG | + | chr5.3:32344952-32344971 | MS.gene054684:CDS | 40.0% |
| ! | GAGATTCTTTTTCCAGGAGT+TGG | + | chr5.3:32347423-32347442 | MS.gene054684:CDS | 40.0% |
| !! | AAAGAGCACTTTCATTGGAC+TGG | + | chr5.3:32348618-32348637 | MS.gene054684:CDS | 40.0% |
| !! | CTGGTTTCCTTGTTGTTCTT+GGG | + | chr5.3:32344994-32345013 | MS.gene054684:CDS | 40.0% |
| !! | GGAATATCGACTTGCCTTAA+TGG | - | chr5.3:32348345-32348364 | None:intergenic | 40.0% |
| !! | TGGTTTCCTTGTTGTTCTTG+GGG | + | chr5.3:32344995-32345014 | MS.gene054684:CDS | 40.0% |
| !!! | TGGCCCGGTTTTAGTTTTTA+AGG | - | chr5.3:32346933-32346952 | None:intergenic | 40.0% |
| AAAAGCCCAAGCATACTGAG+TGG | - | chr5.3:32347199-32347218 | None:intergenic | 45.0% | |
| AAACACTGCAGTTCCTGCTT+TGG | - | chr5.3:32348297-32348316 | None:intergenic | 45.0% | |
| AACAAACGGACCCTTTGTCT+TGG | + | chr5.3:32348069-32348088 | MS.gene054684:intron | 45.0% | |
| AGCAGCCAAGAGATTAGTGA+TGG | - | chr5.3:32345091-32345110 | None:intergenic | 45.0% | |
| AGTGCAAACAAAGCCAAAGC+AGG | + | chr5.3:32348281-32348300 | MS.gene054684:CDS | 45.0% | |
| CAAGACAGGGTGATAAAGGA+AGG | - | chr5.3:32348815-32348834 | None:intergenic | 45.0% | |
| CTCCTTGATTACAGAGTGTG+TGG | + | chr5.3:32346773-32346792 | MS.gene054684:intron | 45.0% | |
| GAGATTGGAATGGTAGAGGT+TGG | + | chr5.3:32348869-32348888 | MS.gene054684:CDS | 45.0% | |
| GATTACAGAGTGTGTGGTTG+TGG | + | chr5.3:32346779-32346798 | MS.gene054684:intron | 45.0% | |
| GGAAACCAGCATGCATACTA+TGG | - | chr5.3:32344983-32345002 | None:intergenic | 45.0% | |
| GGGCTCCATATAGATAGAAG+AGG | - | chr5.3:32346656-32346675 | None:intergenic | 45.0% | |
| GTTCTATTTGCAATGGCTGG+TGG | + | chr5.3:32347147-32347166 | MS.gene054684:CDS | 45.0% | |
| TCCACTTGTGAGCACTTTCT+GGG | + | chr5.3:32349148-32349167 | MS.gene054684:CDS | 45.0% | |
| TCTATTTGCAATGGCTGGTG+GGG | + | chr5.3:32347149-32347168 | MS.gene054684:CDS | 45.0% | |
| TTCCACTTGTGAGCACTTTC+TGG | + | chr5.3:32349147-32349166 | MS.gene054684:CDS | 45.0% | |
| TTGGGAGATTGGAATGGTAG+AGG | + | chr5.3:32348865-32348884 | MS.gene054684:CDS | 45.0% | |
| ! | CAGTATGCTTGGGCTTTTGT+TGG | + | chr5.3:32347201-32347220 | MS.gene054684:CDS | 45.0% |
| ! | GACAAAGGGTCCGTTTGTTT+TGG | - | chr5.3:32348068-32348087 | None:intergenic | 45.0% |
| ! | GCTGGTCTACTTTGTGGATT+TGG | + | chr5.3:32348901-32348920 | MS.gene054684:CDS | 45.0% |
| !! | GAAGGAGTGTTTGTTTGTGC+AGG | + | chr5.3:32349121-32349140 | MS.gene054684:intron | 45.0% |
| !! | GCTGGTTTCCTTGTTGTTCT+TGG | + | chr5.3:32344993-32345012 | MS.gene054684:CDS | 45.0% |
| !! | TTGTTGGCTGGTCTACTTTG+TGG | + | chr5.3:32348895-32348914 | MS.gene054684:CDS | 45.0% |
| !!! | TTCTGGGGCGTTGTTTTGTT+CGG | + | chr5.3:32349164-32349183 | MS.gene054684:CDS | 45.0% |
| !!! | TTAATTTTCATTTTTTTATT+GGG | - | chr5.3:32346191-32346210 | None:intergenic | 5.0% |
| !!! | TTTAATTTTCATTTTTTTAT+TGG | - | chr5.3:32346192-32346211 | None:intergenic | 5.0% |
| ACCAGAAAGCAACCAACTCC+TGG | - | chr5.3:32347438-32347457 | None:intergenic | 50.0% | |
| CAGTGCTCATGGCATCATCT+GGG | + | chr5.3:32349261-32349280 | MS.gene054684:CDS | 50.0% | |
| CCACTTGTGAGCACTTTCTG+GGG | + | chr5.3:32349149-32349168 | MS.gene054684:CDS | 50.0% | |
| CCATGTCCCCAAGAACAACA+AGG | - | chr5.3:32345004-32345023 | None:intergenic | 50.0% | |
| TGTGTTCAGACTGAGCAGTG+CGG | - | chr5.3:32346250-32346269 | None:intergenic | 50.0% | |
| ! | AGGTGCCATAGTATGCATGC+TGG | + | chr5.3:32344975-32344994 | MS.gene054684:CDS | 50.0% |
| ! | TATATGGTGGAGAGCAAGGG+AGG | + | chr5.3:32344955-32344974 | MS.gene054684:CDS | 50.0% |
| ! | TCCAGGAGTTGGTTGCTTTC+TGG | + | chr5.3:32347434-32347453 | MS.gene054684:CDS | 50.0% |
| ! | TGGTAGAGGTTGGGCATTGT+TGG | + | chr5.3:32348879-32348898 | MS.gene054684:CDS | 50.0% |
| !! | CCTTGTTGTTCTTGGGGACA+TGG | + | chr5.3:32345001-32345020 | MS.gene054684:CDS | 50.0% |
| GCAGTGCTCATGGCATCATC+TGG | + | chr5.3:32349260-32349279 | MS.gene054684:CDS | 55.0% | |
| GGTGGGGTTGTCCTTAGCAT+TGG | + | chr5.3:32347165-32347184 | MS.gene054684:CDS | 55.0% | |
| ! | AGAGGTTGGGCATTGTTGGC+TGG | + | chr5.3:32348883-32348902 | MS.gene054684:CDS | 55.0% |
| !! | CCCCAGAAAGTGCTCACAAG+TGG | - | chr5.3:32349152-32349171 | None:intergenic | 55.0% |
| TGCAGCTGTCGCAGTGCTCA+TGG | + | chr5.3:32349250-32349269 | MS.gene054684:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 32344952 | 32349295 | 32344952 | ID=MS.gene054684 |
| chr5.3 | mRNA | 32344952 | 32349295 | 32344952 | ID=MS.gene054684.t1;Parent=MS.gene054684 |
| chr5.3 | exon | 32344952 | 32345179 | 32344952 | ID=MS.gene054684.t1.exon1;Parent=MS.gene054684.t1 |
| chr5.3 | CDS | 32344952 | 32345179 | 32344952 | ID=cds.MS.gene054684.t1;Parent=MS.gene054684.t1 |
| chr5.3 | exon | 32347132 | 32347270 | 32347132 | ID=MS.gene054684.t1.exon2;Parent=MS.gene054684.t1 |
| chr5.3 | CDS | 32347132 | 32347270 | 32347132 | ID=cds.MS.gene054684.t1;Parent=MS.gene054684.t1 |
| chr5.3 | exon | 32347379 | 32347553 | 32347379 | ID=MS.gene054684.t1.exon3;Parent=MS.gene054684.t1 |
| chr5.3 | CDS | 32347379 | 32347553 | 32347379 | ID=cds.MS.gene054684.t1;Parent=MS.gene054684.t1 |
| chr5.3 | exon | 32348147 | 32348184 | 32348147 | ID=MS.gene054684.t1.exon4;Parent=MS.gene054684.t1 |
| chr5.3 | CDS | 32348147 | 32348184 | 32348147 | ID=cds.MS.gene054684.t1;Parent=MS.gene054684.t1 |
| chr5.3 | exon | 32348255 | 32348349 | 32348255 | ID=MS.gene054684.t1.exon5;Parent=MS.gene054684.t1 |
| chr5.3 | CDS | 32348255 | 32348349 | 32348255 | ID=cds.MS.gene054684.t1;Parent=MS.gene054684.t1 |
| chr5.3 | exon | 32348610 | 32348984 | 32348610 | ID=MS.gene054684.t1.exon6;Parent=MS.gene054684.t1 |
| chr5.3 | CDS | 32348610 | 32348984 | 32348610 | ID=cds.MS.gene054684.t1;Parent=MS.gene054684.t1 |
| chr5.3 | exon | 32349143 | 32349295 | 32349143 | ID=MS.gene054684.t1.exon7;Parent=MS.gene054684.t1 |
| chr5.3 | CDS | 32349143 | 32349295 | 32349143 | ID=cds.MS.gene054684.t1;Parent=MS.gene054684.t1 |
| Gene Sequence |
| Protein sequence |
