Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99463.t1 | XP_003604816.1 | 99.8 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 6.20E-256 | 892.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99463.t1 | P37392 | 97.7 | 432 | 10 | 0 | 1 | 432 | 1 | 432 | 4.5e-255 | 881.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99463.t1 | G7JRA0 | 99.8 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 4.5e-256 | 892.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058720 | MS.gene99463 | 0.803783 | 2.96E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99463.t1 | MTR_4g019090 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 945 |
| MS.gene99463.t1 | MTR_4g019110 | 98.214 | 448 | 8 | 0 | 1 | 448 | 1 | 448 | 0.0 | 929 |
| MS.gene99463.t1 | MTR_1g101130 | 97.674 | 430 | 10 | 0 | 1 | 430 | 1 | 430 | 0.0 | 862 |
| MS.gene99463.t1 | MTR_7g089120 | 96.279 | 430 | 16 | 0 | 1 | 430 | 1 | 430 | 0.0 | 852 |
| MS.gene99463.t1 | MTR_4g017630 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 846 |
| MS.gene99463.t1 | MTR_2g031310 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 846 |
| MS.gene99463.t1 | MTR_4g094535 | 94.651 | 430 | 23 | 0 | 1 | 430 | 1 | 430 | 0.0 | 838 |
| MS.gene99463.t1 | MTR_3g113970 | 92.361 | 432 | 31 | 1 | 1 | 430 | 1 | 432 | 0.0 | 823 |
| MS.gene99463.t1 | MTR_8g107250 | 89.955 | 448 | 39 | 2 | 1 | 447 | 1 | 443 | 0.0 | 823 |
| MS.gene99463.t1 | MTR_8g098360 | 90.930 | 430 | 39 | 0 | 1 | 430 | 1 | 430 | 0.0 | 816 |
| MS.gene99463.t1 | MTR_8g085980 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 9.76e-125 | 370 |
| MS.gene99463.t1 | MTR_3g110720 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 9.62e-124 | 367 |
| MS.gene99463.t1 | MTR_1g106005 | 41.242 | 451 | 252 | 3 | 1 | 441 | 1 | 448 | 2.17e-123 | 366 |
| MS.gene99463.t1 | MTR_7g085800 | 41.014 | 434 | 246 | 2 | 1 | 424 | 1 | 434 | 1.01e-122 | 365 |
| MS.gene99463.t1 | MTR_4g097830 | 41.324 | 438 | 239 | 3 | 1 | 424 | 1 | 434 | 1.28e-121 | 362 |
| MS.gene99463.t1 | MTR_6g029190 | 40.177 | 453 | 255 | 3 | 1 | 442 | 1 | 448 | 1.16e-120 | 359 |
| MS.gene99463.t1 | MTR_2g041670 | 37.199 | 457 | 273 | 5 | 1 | 449 | 1 | 451 | 5.45e-99 | 305 |
| MS.gene99463.t1 | MTR_7g117050 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 2.09e-96 | 298 |
| MS.gene99463.t1 | MTR_2g041400 | 37.089 | 426 | 257 | 3 | 1 | 418 | 1 | 423 | 5.18e-95 | 293 |
| MS.gene99463.t1 | MTR_3g063410 | 33.784 | 148 | 90 | 1 | 256 | 395 | 30 | 177 | 6.88e-28 | 110 |
| MS.gene99463.t1 | MTR_3g063410 | 31.852 | 135 | 84 | 1 | 269 | 395 | 4 | 138 | 7.35e-21 | 89.4 |
| MS.gene99463.t1 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 377 | 405 | 1 | 29 | 8.70e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99463.t1 | AT5G62700 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 860 |
| MS.gene99463.t1 | AT5G62690 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 860 |
| MS.gene99463.t1 | AT5G23860 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 860 |
| MS.gene99463.t1 | AT5G23860 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 860 |
| MS.gene99463.t1 | AT5G12250 | 96.279 | 430 | 16 | 0 | 1 | 430 | 1 | 430 | 0.0 | 850 |
| MS.gene99463.t1 | AT2G29550 | 95.824 | 431 | 18 | 0 | 1 | 431 | 1 | 431 | 0.0 | 848 |
| MS.gene99463.t1 | AT1G75780 | 93.735 | 431 | 26 | 1 | 1 | 430 | 1 | 431 | 0.0 | 835 |
| MS.gene99463.t1 | AT1G20010 | 93.271 | 431 | 28 | 1 | 1 | 430 | 1 | 431 | 0.0 | 830 |
| MS.gene99463.t1 | AT4G20890 | 93.256 | 430 | 29 | 0 | 1 | 430 | 1 | 430 | 0.0 | 827 |
| MS.gene99463.t1 | AT5G44340 | 92.791 | 430 | 31 | 0 | 1 | 430 | 1 | 430 | 0.0 | 823 |
| MS.gene99463.t1 | AT5G19780 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.51e-124 | 369 |
| MS.gene99463.t1 | AT5G19770 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.51e-124 | 369 |
| MS.gene99463.t1 | AT1G64740 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 3.19e-124 | 369 |
| MS.gene99463.t1 | AT4G14960 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.49e-122 | 364 |
| MS.gene99463.t1 | AT1G04820 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 9.60e-122 | 362 |
| MS.gene99463.t1 | AT1G50010 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 9.60e-122 | 362 |
| MS.gene99463.t1 | AT4G14960 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 5.49e-103 | 313 |
| MS.gene99463.t1 | AT5G05620 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 7.61e-97 | 299 |
| MS.gene99463.t1 | AT3G61650 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 1.06e-96 | 299 |
Find 124 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAATCGGAGCAAAATTC+TGG | 0.222809 | 4.2:+83354745 | MS.gene99463:CDS |
| ACAGTTGATTTGACATTGTT+TGG | 0.282851 | 4.2:-83356679 | None:intergenic |
| CGGAAACTCGACTTCAATTC+AGG | 0.306021 | 4.2:+83356747 | MS.gene99463:CDS |
| AGAGTGGTGCTGGGAATAAC+TGG | 0.308905 | 4.2:+83354985 | MS.gene99463:CDS |
| GGATCTTGAACCGGGGACTA+TGG | 0.319517 | 4.2:+83354902 | MS.gene99463:CDS |
| CCCTTCTCATTTCAAAGATC+AGG | 0.337039 | 4.2:+83355973 | MS.gene99463:CDS |
| GTGTTTGGTCAGAGTGGTGC+TGG | 0.360890 | 4.2:+83354975 | MS.gene99463:CDS |
| TGAGAATTGTGATTGCTTGC+AGG | 0.369709 | 4.2:+83355076 | MS.gene99463:CDS |
| AGCAGCACACATCATGTTCT+TGG | 0.381073 | 4.2:-83356530 | None:intergenic |
| GTGAGGTATCGTCCGTGTCT+AGG | 0.392730 | 4.2:-83356556 | None:intergenic |
| CTCCGATTTGGTTACCGCAT+TGG | 0.398686 | 4.2:-83354734 | None:intergenic |
| CTAGGTGGAGGAACTGGATC+TGG | 0.402050 | 4.2:+83355942 | MS.gene99463:CDS |
| CACTGCTATGTTCAGGAGAA+AGG | 0.402943 | 4.2:+83356798 | MS.gene99463:CDS |
| GTTTGTGATATTCCACCAAC+AGG | 0.410840 | 4.2:+83356700 | MS.gene99463:CDS |
| ATTCTGTTCTTGATGTTGTT+AGG | 0.411260 | 4.2:+83355045 | MS.gene99463:CDS |
| CCCTGATCTTTGAAATGAGA+AGG | 0.422142 | 4.2:-83355974 | None:intergenic |
| TATAAACTAGCTTACAGCTT+GGG | 0.426537 | 4.2:-83356184 | None:intergenic |
| CATTCACTAGGTGGAGGAAC+TGG | 0.427410 | 4.2:+83355936 | MS.gene99463:CDS |
| AACAGATAAAGTAGCATTGT+AGG | 0.434815 | 4.2:-83356072 | None:intergenic |
| TTGATATCAGCTACCATGTC+TGG | 0.442320 | 4.2:+83356325 | MS.gene99463:CDS |
| CGTGAGATTCTTCACATTCA+AGG | 0.442432 | 4.2:+83354708 | MS.gene99463:CDS |
| AACAGTTCACTGCTATGTTC+AGG | 0.442593 | 4.2:+83356791 | MS.gene99463:CDS |
| CAAGAGGTTCTCAGCAGTAC+CGG | 0.448911 | 4.2:+83356467 | MS.gene99463:CDS |
| GATTCTGATGGATCTTGAAC+CGG | 0.450792 | 4.2:+83354893 | MS.gene99463:CDS |
| ACCACAGTGTCAGAAACCTT+TGG | 0.453492 | 4.2:-83356044 | None:intergenic |
| CGTTCCCCGTGCGATTCTGA+TGG | 0.454968 | 4.2:+83354881 | MS.gene99463:CDS |
| GAATCGCACGGGGAACGAAC+CGG | 0.462847 | 4.2:-83354875 | None:intergenic |
| GGTAGGGTCGATTCCATGTT+CGG | 0.466690 | 4.2:-83354781 | None:intergenic |
| CTGGGAATAACTGGGCTAAA+GGG | 0.468422 | 4.2:+83354994 | MS.gene99463:CDS |
| ACATGTTGTTTGAGGTTCCC+TGG | 0.471364 | 4.2:+83356352 | MS.gene99463:CDS |
| CACATTTGCTGTGTGAGCTC+CGG | 0.476415 | 4.2:-83356502 | None:intergenic |
| GGCCAATGCGGTAACCAAAT+CGG | 0.477508 | 4.2:+83354732 | MS.gene99463:CDS |
| GGAGAAAGGCTTTCTTGCAT+TGG | 0.478824 | 4.2:+83356812 | MS.gene99463:CDS |
| GGAGGAACTGGATCTGGAAT+GGG | 0.479696 | 4.2:+83355948 | MS.gene99463:CDS |
| AAAGTAAGCATCATCCTGTC+CGG | 0.480930 | 4.2:-83356005 | None:intergenic |
| TGGAGGAACTGGATCTGGAA+TGG | 0.483395 | 4.2:+83355947 | MS.gene99463:CDS |
| CTGGTGTCACATGTTGTTTG+AGG | 0.483612 | 4.2:+83356344 | MS.gene99463:CDS |
| GCTGGGAATAACTGGGCTAA+AGG | 0.483743 | 4.2:+83354993 | MS.gene99463:CDS |
| GGATGAGTATGAAGATGAAG+AGG | 0.487277 | 4.2:+83356939 | MS.gene99463:CDS |
| CCTGATCTTTGAAATGAGAA+GGG | 0.489164 | 4.2:-83355973 | None:intergenic |
| TGAGGTATCGTCCGTGTCTA+GGG | 0.489268 | 4.2:-83356555 | None:intergenic |
| AGATCGGAGTTTAGCTGACC+AGG | 0.493352 | 4.2:-83356370 | None:intergenic |
| GGGTGGTAAGCTTGAGAGTA+CGG | 0.497426 | 4.2:-83356163 | None:intergenic |
| TGAGTATGAAGATGAAGAGG+AGG | 0.497865 | 4.2:+83356942 | MS.gene99463:CDS |
| TCCACCAACAGGGTTGAAGA+TGG | 0.506013 | 4.2:+83356711 | MS.gene99463:CDS |
| CCAAATCGGAGCAAAATTCT+GGG | 0.506377 | 4.2:+83354746 | MS.gene99463:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.506815 | 4.2:+83356820 | MS.gene99463:CDS |
| TGAAAATGCAGATGAATGTA+TGG | 0.507784 | 4.2:+83356106 | MS.gene99463:CDS |
| TTGCATTGGTACACTGGTGA+AGG | 0.510492 | 4.2:+83356826 | MS.gene99463:CDS |
| TGACCAAACACAAAATTATC+CGG | 0.511815 | 4.2:-83354963 | None:intergenic |
| TGAACTGTTCACTCACCCTT+CGG | 0.513958 | 4.2:-83356777 | None:intergenic |
| CGGAGCTCACACAGCAAATG+TGG | 0.517177 | 4.2:+83356503 | MS.gene99463:CDS |
| ATTCTGATGGATCTTGAACC+GGG | 0.518607 | 4.2:+83354894 | MS.gene99463:CDS |
| AAGATGGCTTCTACATTCAT+CGG | 0.521508 | 4.2:+83356727 | MS.gene99463:CDS |
| CCTTCTCATTTCAAAGATCA+GGG | 0.521900 | 4.2:+83355974 | MS.gene99463:CDS |
| GCCATCTTCAACCCTGTTGG+TGG | 0.532132 | 4.2:-83356712 | None:intergenic |
| AAGAGGTTCTCAGCAGTACC+GGG | 0.534007 | 4.2:+83356468 | MS.gene99463:CDS |
| ACTATGGATAGTGTCCGGTC+TGG | 0.534394 | 4.2:+83354918 | MS.gene99463:CDS |
| ACTCGTCCTACTTTGTCGAA+TGG | 0.535185 | 4.2:+83356653 | MS.gene99463:CDS |
| CACAGCAAGCTTCCTCAGAT+CGG | 0.537427 | 4.2:-83356386 | None:intergenic |
| TCCAAAGGTTTCTGACACTG+TGG | 0.539429 | 4.2:+83356043 | MS.gene99463:CDS |
| TTTGCACCTTTGACTTCAAG+AGG | 0.541243 | 4.2:+83356451 | MS.gene99463:CDS |
| TGAAGAGGAGGATTATCAGC+AGG | 0.542245 | 4.2:+83356954 | MS.gene99463:CDS |
| GTGTCAGAAACCTTTGGAGA+AGG | 0.546100 | 4.2:-83356038 | None:intergenic |
| TGTCAGAAACCTTTGGAGAA+GGG | 0.548719 | 4.2:-83356037 | None:intergenic |
| ATCGACCCTACCGGACGCTA+CGG | 0.553152 | 4.2:+83354792 | MS.gene99463:CDS |
| TCAGGGAAGAATACCCGGAC+AGG | 0.557496 | 4.2:+83355991 | MS.gene99463:CDS |
| GAGAATTGTGATTGCTTGCA+GGG | 0.561746 | 4.2:+83355077 | MS.gene99463:CDS |
| TTGGTACACTGGTGAAGGAA+TGG | 0.562019 | 4.2:+83356831 | MS.gene99463:CDS |
| TGGAATCCATTCGACAAAGT+AGG | 0.564196 | 4.2:-83356659 | None:intergenic |
| TGTTTGGTCAGAGTGGTGCT+GGG | 0.566395 | 4.2:+83354976 | MS.gene99463:CDS |
| CGGGGACTATGGATAGTGTC+CGG | 0.570224 | 4.2:+83354913 | MS.gene99463:CDS |
| AGAGGTACCACCGTAGCGTC+CGG | 0.571500 | 4.2:-83354802 | None:intergenic |
| AAGATCCATCAGAATCGCAC+GGG | 0.574089 | 4.2:-83354886 | None:intergenic |
| AGTGTCCGGTCTGGACCGTA+CGG | 0.574566 | 4.2:+83354927 | MS.gene99463:CDS |
| AAGTAAGCATCATCCTGTCC+GGG | 0.576330 | 4.2:-83356004 | None:intergenic |
| GAACATGGAATCGACCCTAC+CGG | 0.577600 | 4.2:+83354783 | MS.gene99463:CDS |
| TACTACAACGAAGCTAGTTG+TGG | 0.580397 | 4.2:+83354852 | MS.gene99463:CDS |
| TGAGAACCTCTTGAAGTCAA+AGG | 0.582877 | 4.2:-83356457 | None:intergenic |
| GAAGTCGTTTGCGCCGAACA+TGG | 0.583535 | 4.2:+83354768 | MS.gene99463:CDS |
| CAATTCAGGAAATGTTCCGA+AGG | 0.586545 | 4.2:+83356761 | MS.gene99463:CDS |
| GTACCGGGCTTTGAGTGTAC+CGG | 0.586867 | 4.2:+83356483 | MS.gene99463:CDS |
| TCAAGATGCTACTGCAGAGG+AGG | 0.589411 | 4.2:+83356918 | MS.gene99463:CDS |
| TTTCAAGTATGTCATTCACT+AGG | 0.593685 | 4.2:+83355924 | MS.gene99463:CDS |
| GAAGCCATCTTCAACCCTGT+TGG | 0.595148 | 4.2:-83356715 | None:intergenic |
| TCGCTCAAGTTGAAGTTCAG+AGG | 0.597388 | 4.2:-83354820 | None:intergenic |
| CAAGTATGTCATTCACTAGG+TGG | 0.598575 | 4.2:+83355927 | MS.gene99463:CDS |
| ACGGAAGCAAATATCATACA+AGG | 0.601543 | 4.2:-83356144 | None:intergenic |
| ACAGATAAAGTAGCATTGTA+GGG | 0.601899 | 4.2:-83356071 | None:intergenic |
| TGGTGAAGGAATGGATGAGA+TGG | 0.601920 | 4.2:+83356840 | MS.gene99463:CDS |
| GCTAAAGGGCATTACACTGA+AGG | 0.603983 | 4.2:+83355008 | MS.gene99463:CDS |
| CAAGATCCATCAGAATCGCA+CGG | 0.606324 | 4.2:-83354887 | None:intergenic |
| ATAAACTAGCTTACAGCTTG+GGG | 0.606377 | 4.2:-83356183 | None:intergenic |
| TCTGACCGTACGGTCCAGAC+CGG | 0.610666 | 4.2:-83354932 | None:intergenic |
| ACTGCATCAGCCATCTTCAG+AGG | 0.610984 | 4.2:+83356577 | MS.gene99463:CDS |
| TTCTGATGGATCTTGAACCG+GGG | 0.614023 | 4.2:+83354895 | MS.gene99463:CDS |
| AAAGATCAGGGAAGAATACC+CGG | 0.614075 | 4.2:+83355986 | MS.gene99463:CDS |
| CACATTCAAGGTGGCCAATG+CGG | 0.615773 | 4.2:+83354720 | MS.gene99463:CDS |
| GTCAGCTAAACTCCGATCTG+AGG | 0.617224 | 4.2:+83356374 | MS.gene99463:CDS |
| AACTAGCTTACAGCTTGGGG+TGG | 0.617330 | 4.2:-83356180 | None:intergenic |
| CAACATGAATGATCTTGTGT+CGG | 0.617924 | 4.2:+83356882 | MS.gene99463:CDS |
| GTATGTCATTCACTAGGTGG+AGG | 0.621491 | 4.2:+83355930 | MS.gene99463:CDS |
| GAGTGGTGCTGGGAATAACT+GGG | 0.622575 | 4.2:+83354986 | MS.gene99463:CDS |
| GTACCACCGTAGCGTCCGGT+AGG | 0.632327 | 4.2:-83354798 | None:intergenic |
| GCTCCGGTACACTCAAAGCC+CGG | 0.632765 | 4.2:-83356486 | None:intergenic |
| ACAACGAAGCTAGTTGTGGC+CGG | 0.636769 | 4.2:+83354856 | MS.gene99463:CDS |
| GTACGGTCAGATCTTTAGAC+CGG | 0.637619 | 4.2:+83354944 | MS.gene99463:CDS |
| ACATGGTAGCTGATATCAAG+TGG | 0.640117 | 4.2:-83356321 | None:intergenic |
| AATTCAGGAAATGTTCCGAA+GGG | 0.640149 | 4.2:+83356762 | MS.gene99463:CDS |
| ATATCAAGATGCTACTGCAG+AGG | 0.642344 | 4.2:+83356915 | MS.gene99463:CDS |
| TACCACCGTAGCGTCCGGTA+GGG | 0.643273 | 4.2:-83354797 | None:intergenic |
| TGAGATGGAGTTCACTGAGG+CGG | 0.651559 | 4.2:+83356855 | MS.gene99463:CDS |
| GGTCTAAAGATCTGACCGTA+CGG | 0.651719 | 4.2:-83354942 | None:intergenic |
| GACCCTACCGGACGCTACGG+TGG | 0.654052 | 4.2:+83354795 | MS.gene99463:CDS |
| CGGACACTATCCATAGTCCC+CGG | 0.661730 | 4.2:-83354912 | None:intergenic |
| TTTGTGATATTCCACCAACA+GGG | 0.665479 | 4.2:+83356701 | MS.gene99463:CDS |
| GGAGCTCACACAGCAAATGT+GGG | 0.673131 | 4.2:+83356504 | MS.gene99463:CDS |
| ACAACATGTGACACCAGACA+TGG | 0.683355 | 4.2:-83356338 | None:intergenic |
| GATCGGAGTTTAGCTGACCA+GGG | 0.686480 | 4.2:-83356369 | None:intergenic |
| GAGATTCTTCACATTCAAGG+TGG | 0.707839 | 4.2:+83354711 | MS.gene99463:CDS |
| AGATCCATCAGAATCGCACG+GGG | 0.713597 | 4.2:-83354885 | None:intergenic |
| TGTGCTGCTGACCCTAGACA+CGG | 0.727199 | 4.2:+83356544 | MS.gene99463:CDS |
| TGAAGATGGCTGATGCAGTG+AGG | 0.739156 | 4.2:-83356573 | None:intergenic |
| GGATGAGATGGAGTTCACTG+AGG | 0.753115 | 4.2:+83356852 | MS.gene99463:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTGTTTTTGAAATTTA+GGG | + | chr4.2:83355120-83355139 | MS.gene99463:intron | 15.0% |
| !!! | TTGATTTGTTTTTGAAATTT+AGG | + | chr4.2:83355119-83355138 | MS.gene99463:intron | 15.0% |
| !! | AACAAACTTGAAAACATATA+TGG | - | chr4.2:83356236-83356255 | None:intergenic | 20.0% |
| !! | TTTGTTACATTTGTTCAAAA+AGG | + | chr4.2:83356250-83356269 | MS.gene99463:intron | 20.0% |
| !!! | ACTTCATTGTTTATGAATTT+TGG | + | chr4.2:83355792-83355811 | MS.gene99463:intron | 20.0% |
| !!! | CTTCATTGTTTATGAATTTT+GGG | + | chr4.2:83355793-83355812 | MS.gene99463:intron | 20.0% |
| !!! | TTCAAAAAGGTTTCTAATTT+TGG | + | chr4.2:83356263-83356282 | MS.gene99463:intron | 20.0% |
| !!! | TTTACATCTGATTTTGAATT+GGG | + | chr4.2:83355660-83355679 | MS.gene99463:intron | 20.0% |
| !!! | TTTTACATCTGATTTTGAAT+TGG | + | chr4.2:83355659-83355678 | MS.gene99463:intron | 20.0% |
| !!! | TTTTTTCTCTTCAATTAGAT+GGG | + | chr4.2:83355585-83355604 | MS.gene99463:intron | 20.0% |
| !!! | TTTTTTTCTCTTCAATTAGA+TGG | + | chr4.2:83355584-83355603 | MS.gene99463:intron | 20.0% |
| ! | AAAGAAAGTGATTAGAAATG+AGG | - | chr4.2:83356210-83356229 | None:intergenic | 25.0% |
| ! | CATTCAATTCCAACAAAAAA+AGG | - | chr4.2:83355613-83355632 | None:intergenic | 25.0% |
| ! | GGTAAACTTTGATTATTATG+TGG | + | chr4.2:83355852-83355871 | MS.gene99463:intron | 25.0% |
| ! | TTAATGAAATGAAGTCTACA+TGG | + | chr4.2:83355325-83355344 | MS.gene99463:intron | 25.0% |
| !! | ATGTTGCTGTTAAGTTAATT+GGG | + | chr4.2:83355730-83355749 | MS.gene99463:intron | 25.0% |
| !!! | AATGAATTTGTTGAAGTGTT+TGG | + | chr4.2:83355200-83355219 | MS.gene99463:intron | 25.0% |
| !!! | GCTTTGTGTTAATTTTGATA+TGG | + | chr4.2:83355512-83355531 | MS.gene99463:intron | 25.0% |
| !!! | GTATGTGTTAATTTTGCTAT+AGG | + | chr4.2:83355237-83355256 | MS.gene99463:intron | 25.0% |
| !!! | TTGGGTTTGCTATATAATAT+GGG | + | chr4.2:83355811-83355830 | MS.gene99463:intron | 25.0% |
| !!! | TTTGGGTTTGCTATATAATA+TGG | + | chr4.2:83355810-83355829 | MS.gene99463:intron | 25.0% |
| AACAGATAAAGTAGCATTGT+AGG | - | chr4.2:83356075-83356094 | None:intergenic | 30.0% | |
| ACAGATAAAGTAGCATTGTA+GGG | - | chr4.2:83356074-83356093 | None:intergenic | 30.0% | |
| ATTCAATGTATCATATGCGT+CGG | + | chr4.2:83355420-83355439 | MS.gene99463:intron | 30.0% | |
| ATTCTGTTCTTGATGTTGTT+AGG | + | chr4.2:83355045-83355064 | MS.gene99463:CDS | 30.0% | |
| TGAAAATGCAGATGAATGTA+TGG | + | chr4.2:83356106-83356125 | MS.gene99463:CDS | 30.0% | |
| TGACCAAACACAAAATTATC+CGG | - | chr4.2:83354966-83354985 | None:intergenic | 30.0% | |
| ! | CATAGTTTATAGAGCGTTTA+TGG | + | chr4.2:83355487-83355506 | MS.gene99463:intron | 30.0% |
| ! | CATGTTGCTGTTAAGTTAAT+TGG | + | chr4.2:83355729-83355748 | MS.gene99463:intron | 30.0% |
| ! | GGAATATTTTGCATGATTTG+TGG | + | chr4.2:83355261-83355280 | MS.gene99463:intron | 30.0% |
| ! | TATAAACTAGCTTACAGCTT+GGG | - | chr4.2:83356187-83356206 | None:intergenic | 30.0% |
| ! | TTTCAAGTATGTCATTCACT+AGG | + | chr4.2:83355924-83355943 | MS.gene99463:CDS | 30.0% |
| ! | TTTTATTCTTTTGTGTGTGC+AGG | + | chr4.2:83355900-83355919 | MS.gene99463:intron | 30.0% |
| !! | AATTTGTTGAAGTGTTTGGT+GGG | + | chr4.2:83355204-83355223 | MS.gene99463:intron | 30.0% |
| !! | ACAGTTGATTTGACATTGTT+TGG | - | chr4.2:83356682-83356701 | None:intergenic | 30.0% |
| !! | GGGTGTATTTTTATCTAAGA+GGG | + | chr4.2:83355831-83355850 | MS.gene99463:intron | 30.0% |
| !! | GTGTTAATTTTGATATGGAG+TGG | + | chr4.2:83355517-83355536 | MS.gene99463:intron | 30.0% |
| !! | TGGGTGTATTTTTATCTAAG+AGG | + | chr4.2:83355830-83355849 | MS.gene99463:intron | 30.0% |
| !! | TGTGTTAATTTTGCTATAGG+TGG | + | chr4.2:83355240-83355259 | MS.gene99463:intron | 30.0% |
| !! | TTATGTGGCTGATTTTGAAA+TGG | + | chr4.2:83355867-83355886 | MS.gene99463:intron | 30.0% |
| !!! | TGTTGATTTTGAAGTGTTTG+TGG | + | chr4.2:83355146-83355165 | MS.gene99463:intron | 30.0% |
| !!! | TTGTGTGTGAGTTTTTTTTC+AGG | + | chr4.2:83355686-83355705 | MS.gene99463:intron | 30.0% |
| AACCCAACATGAAAAAGTGA+AGG | - | chr4.2:83356432-83356451 | None:intergenic | 35.0% | |
| AAGATGGCTTCTACATTCAT+CGG | + | chr4.2:83356727-83356746 | MS.gene99463:CDS | 35.0% | |
| AATTCAGGAAATGTTCCGAA+GGG | + | chr4.2:83356762-83356781 | MS.gene99463:CDS | 35.0% | |
| ACGGAAGCAAATATCATACA+AGG | - | chr4.2:83356147-83356166 | None:intergenic | 35.0% | |
| CAACATGAATGATCTTGTGT+CGG | + | chr4.2:83356882-83356901 | MS.gene99463:CDS | 35.0% | |
| CCTTCTCATTTCAAAGATCA+GGG | + | chr4.2:83355974-83355993 | MS.gene99463:CDS | 35.0% | |
| TGATTATGAAGCACGAACAT+TGG | + | chr4.2:83355354-83355373 | MS.gene99463:intron | 35.0% | |
| TTTGTGATATTCCACCAACA+GGG | + | chr4.2:83356701-83356720 | MS.gene99463:CDS | 35.0% | |
| ! | AATTTTGTGTTTGGTCAGAG+TGG | + | chr4.2:83354969-83354988 | MS.gene99463:CDS | 35.0% |
| ! | AGACCGGATAATTTTGTGTT+TGG | + | chr4.2:83354960-83354979 | MS.gene99463:CDS | 35.0% |
| ! | AGTTTATAGAGCGTTTATGG+TGG | + | chr4.2:83355490-83355509 | MS.gene99463:intron | 35.0% |
| ! | ATAAACTAGCTTACAGCTTG+GGG | - | chr4.2:83356186-83356205 | None:intergenic | 35.0% |
| ! | GTATAAACTAGCTTACAGCT+TGG | - | chr4.2:83356188-83356207 | None:intergenic | 35.0% |
| !! | CCTGATCTTTGAAATGAGAA+GGG | - | chr4.2:83355976-83355995 | None:intergenic | 35.0% |
| !! | GAATTTGTTGAAGTGTTTGG+TGG | + | chr4.2:83355203-83355222 | MS.gene99463:intron | 35.0% |
| !!! | TTGCTTTTTTGTGATGCAGT+TGG | + | chr4.2:83356289-83356308 | MS.gene99463:intron | 35.0% |
| AAAGATCAGGGAAGAATACC+CGG | + | chr4.2:83355986-83356005 | MS.gene99463:CDS | 40.0% | |
| AAAGTAAGCATCATCCTGTC+CGG | - | chr4.2:83356008-83356027 | None:intergenic | 40.0% | |
| AACAGTTCACTGCTATGTTC+AGG | + | chr4.2:83356791-83356810 | MS.gene99463:CDS | 40.0% | |
| AACATGAAAAAGTGAAGGCG+AGG | - | chr4.2:83356427-83356446 | None:intergenic | 40.0% | |
| ACATGAAAAAGTGAAGGCGA+GGG | - | chr4.2:83356426-83356445 | None:intergenic | 40.0% | |
| ACATGGTAGCTGATATCAAG+TGG | - | chr4.2:83356324-83356343 | None:intergenic | 40.0% | |
| ACCAAATCGGAGCAAAATTC+TGG | + | chr4.2:83354745-83354764 | MS.gene99463:CDS | 40.0% | |
| ATATCAAGATGCTACTGCAG+AGG | + | chr4.2:83356915-83356934 | MS.gene99463:CDS | 40.0% | |
| CAAGTATGTCATTCACTAGG+TGG | + | chr4.2:83355927-83355946 | MS.gene99463:CDS | 40.0% | |
| CAATTCAGGAAATGTTCCGA+AGG | + | chr4.2:83356761-83356780 | MS.gene99463:CDS | 40.0% | |
| CCAAATCGGAGCAAAATTCT+GGG | + | chr4.2:83354746-83354765 | MS.gene99463:CDS | 40.0% | |
| CCCTTCTCATTTCAAAGATC+AGG | + | chr4.2:83355973-83355992 | MS.gene99463:CDS | 40.0% | |
| CGTGAGATTCTTCACATTCA+AGG | + | chr4.2:83354708-83354727 | MS.gene99463:CDS | 40.0% | |
| GAGAATTGTGATTGCTTGCA+GGG | + | chr4.2:83355077-83355096 | MS.gene99463:CDS | 40.0% | |
| GAGATTCTTCACATTCAAGG+TGG | + | chr4.2:83354711-83354730 | MS.gene99463:CDS | 40.0% | |
| GGATGAGTATGAAGATGAAG+AGG | + | chr4.2:83356939-83356958 | MS.gene99463:CDS | 40.0% | |
| GTTTGTGATATTCCACCAAC+AGG | + | chr4.2:83356700-83356719 | MS.gene99463:CDS | 40.0% | |
| TACTACAACGAAGCTAGTTG+TGG | + | chr4.2:83354852-83354871 | MS.gene99463:CDS | 40.0% | |
| TGAGAACCTCTTGAAGTCAA+AGG | - | chr4.2:83356460-83356479 | None:intergenic | 40.0% | |
| TGAGAATTGTGATTGCTTGC+AGG | + | chr4.2:83355076-83355095 | MS.gene99463:CDS | 40.0% | |
| TGAGTATGAAGATGAAGAGG+AGG | + | chr4.2:83356942-83356961 | MS.gene99463:CDS | 40.0% | |
| TGGAATCCATTCGACAAAGT+AGG | - | chr4.2:83356662-83356681 | None:intergenic | 40.0% | |
| TTGATATCAGCTACCATGTC+TGG | + | chr4.2:83356325-83356344 | MS.gene99463:CDS | 40.0% | |
| TTTGTGGCTGATTGTGCATT+TGG | + | chr4.2:83355553-83355572 | MS.gene99463:intron | 40.0% | |
| ! | ATTCTGATGGATCTTGAACC+GGG | + | chr4.2:83354894-83354913 | MS.gene99463:CDS | 40.0% |
| ! | CATCTGCATTTTCAACAAGC+TGG | - | chr4.2:83356100-83356119 | None:intergenic | 40.0% |
| ! | GATTCTGATGGATCTTGAAC+CGG | + | chr4.2:83354893-83354912 | MS.gene99463:CDS | 40.0% |
| ! | TGGATCTTTTGTCTGCTTTG+TGG | + | chr4.2:83355537-83355556 | MS.gene99463:intron | 40.0% |
| ! | TGTCAGAAACCTTTGGAGAA+GGG | - | chr4.2:83356040-83356059 | None:intergenic | 40.0% |
| ! | TTTGCACCTTTGACTTCAAG+AGG | + | chr4.2:83356451-83356470 | MS.gene99463:CDS | 40.0% |
| !! | CCCTGATCTTTGAAATGAGA+AGG | - | chr4.2:83355977-83355996 | None:intergenic | 40.0% |
| !!! | AGATGGGTGCCTTTTTTTGT+TGG | + | chr4.2:83355601-83355620 | MS.gene99463:intron | 40.0% |
| !!! | CGCCTTCACTTTTTCATGTT+GGG | + | chr4.2:83356427-83356446 | MS.gene99463:CDS | 40.0% |
| !!! | GGCTGATTTTGAAATGGATG+TGG | + | chr4.2:83355873-83355892 | MS.gene99463:intron | 40.0% |
| !!! | TCGCCTTCACTTTTTCATGT+TGG | + | chr4.2:83356426-83356445 | MS.gene99463:CDS | 40.0% |
| AAAAAGTGAAGGCGAGGGAA+TGG | - | chr4.2:83356421-83356440 | None:intergenic | 45.0% | |
| AAGATCCATCAGAATCGCAC+GGG | - | chr4.2:83354889-83354908 | None:intergenic | 45.0% | |
| AAGTAAGCATCATCCTGTCC+GGG | - | chr4.2:83356007-83356026 | None:intergenic | 45.0% | |
| ACAACATGTGACACCAGACA+TGG | - | chr4.2:83356341-83356360 | None:intergenic | 45.0% | |
| ACCACAGTGTCAGAAACCTT+TGG | - | chr4.2:83356047-83356066 | None:intergenic | 45.0% | |
| ACTCGTCCTACTTTGTCGAA+TGG | + | chr4.2:83356653-83356672 | MS.gene99463:CDS | 45.0% | |
| AGCAGCACACATCATGTTCT+TGG | - | chr4.2:83356533-83356552 | None:intergenic | 45.0% | |
| CAAGATCCATCAGAATCGCA+CGG | - | chr4.2:83354890-83354909 | None:intergenic | 45.0% | |
| CACTGCTATGTTCAGGAGAA+AGG | + | chr4.2:83356798-83356817 | MS.gene99463:CDS | 45.0% | |
| CGGAAACTCGACTTCAATTC+AGG | + | chr4.2:83356747-83356766 | MS.gene99463:CDS | 45.0% | |
| CTGGGAATAACTGGGCTAAA+GGG | + | chr4.2:83354994-83355013 | MS.gene99463:CDS | 45.0% | |
| GGAGAAAGGCTTTCTTGCAT+TGG | + | chr4.2:83356812-83356831 | MS.gene99463:CDS | 45.0% | |
| GGTCTAAAGATCTGACCGTA+CGG | - | chr4.2:83354945-83354964 | None:intergenic | 45.0% | |
| GTACGGTCAGATCTTTAGAC+CGG | + | chr4.2:83354944-83354963 | MS.gene99463:CDS | 45.0% | |
| GTATGTCATTCACTAGGTGG+AGG | + | chr4.2:83355930-83355949 | MS.gene99463:CDS | 45.0% | |
| TCCAAAGGTTTCTGACACTG+TGG | + | chr4.2:83356043-83356062 | MS.gene99463:CDS | 45.0% | |
| TGAACTGTTCACTCACCCTT+CGG | - | chr4.2:83356780-83356799 | None:intergenic | 45.0% | |
| TGAAGAGGAGGATTATCAGC+AGG | + | chr4.2:83356954-83356973 | MS.gene99463:CDS | 45.0% | |
| TGGTGAAGGAATGGATGAGA+TGG | + | chr4.2:83356840-83356859 | MS.gene99463:CDS | 45.0% | |
| TTGGTACACTGGTGAAGGAA+TGG | + | chr4.2:83356831-83356850 | MS.gene99463:CDS | 45.0% | |
| ! | ACATGTTGTTTGAGGTTCCC+TGG | + | chr4.2:83356352-83356371 | MS.gene99463:CDS | 45.0% |
| ! | CCCAGAATTTTGCTCCGATT+TGG | - | chr4.2:83354749-83354768 | None:intergenic | 45.0% |
| ! | CTCTGTTTTCCCTTCTCCAA+AGG | + | chr4.2:83356028-83356047 | MS.gene99463:CDS | 45.0% |
| ! | GCTTTCTTGCATTGGTACAC+TGG | + | chr4.2:83356820-83356839 | MS.gene99463:CDS | 45.0% |
| ! | GTGTCAGAAACCTTTGGAGA+AGG | - | chr4.2:83356041-83356060 | None:intergenic | 45.0% |
| ! | TTCTGATGGATCTTGAACCG+GGG | + | chr4.2:83354895-83354914 | MS.gene99463:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | + | chr4.2:83356826-83356845 | MS.gene99463:CDS | 45.0% |
| !! | AGTGTTTGGTGGGTTTGTGA+TGG | + | chr4.2:83355214-83355233 | MS.gene99463:intron | 45.0% |
| !! | CTGGTGTCACATGTTGTTTG+AGG | + | chr4.2:83356344-83356363 | MS.gene99463:CDS | 45.0% |
| !! | GCTAAAGGGCATTACACTGA+AGG | + | chr4.2:83355008-83355027 | MS.gene99463:CDS | 45.0% |
| !! | GCTCATTTTGCCTCTGAAGA+TGG | - | chr4.2:83356590-83356609 | None:intergenic | 45.0% |
| !! | GTGTTTGGTGGGTTTGTGAT+GGG | + | chr4.2:83355215-83355234 | MS.gene99463:intron | 45.0% |
| !! | TCGCTCAAGTTGAAGTTCAG+AGG | - | chr4.2:83354823-83354842 | None:intergenic | 45.0% |
| AAGAGGTTCTCAGCAGTACC+GGG | + | chr4.2:83356468-83356487 | MS.gene99463:CDS | 50.0% | |
| ACAACGAAGCTAGTTGTGGC+CGG | + | chr4.2:83354856-83354875 | MS.gene99463:CDS | 50.0% | |
| ACTATGGATAGTGTCCGGTC+TGG | + | chr4.2:83354918-83354937 | MS.gene99463:CDS | 50.0% | |
| ACTGCATCAGCCATCTTCAG+AGG | + | chr4.2:83356577-83356596 | MS.gene99463:CDS | 50.0% | |
| AGATCCATCAGAATCGCACG+GGG | - | chr4.2:83354888-83354907 | None:intergenic | 50.0% | |
| AGATCGGAGTTTAGCTGACC+AGG | - | chr4.2:83356373-83356392 | None:intergenic | 50.0% | |
| AGCAGGACACACCTAATCTG+AGG | + | chr4.2:83355451-83355470 | MS.gene99463:intron | 50.0% | |
| CAAGAGGTTCTCAGCAGTAC+CGG | + | chr4.2:83356467-83356486 | MS.gene99463:CDS | 50.0% | |
| CACAGCAAGCTTCCTCAGAT+CGG | - | chr4.2:83356389-83356408 | None:intergenic | 50.0% | |
| CACATTCAAGGTGGCCAATG+CGG | + | chr4.2:83354720-83354739 | MS.gene99463:CDS | 50.0% | |
| CATTCACTAGGTGGAGGAAC+TGG | + | chr4.2:83355936-83355955 | MS.gene99463:CDS | 50.0% | |
| GAACATGGAATCGACCCTAC+CGG | + | chr4.2:83354783-83354802 | MS.gene99463:CDS | 50.0% | |
| GAAGCCATCTTCAACCCTGT+TGG | - | chr4.2:83356718-83356737 | None:intergenic | 50.0% | |
| GATCGGAGTTTAGCTGACCA+GGG | - | chr4.2:83356372-83356391 | None:intergenic | 50.0% | |
| GCACAGACACTCCTCAGATT+AGG | - | chr4.2:83355465-83355484 | None:intergenic | 50.0% | |
| GCTGGGAATAACTGGGCTAA+AGG | + | chr4.2:83354993-83355012 | MS.gene99463:CDS | 50.0% | |
| GGAGCTCACACAGCAAATGT+GGG | + | chr4.2:83356504-83356523 | MS.gene99463:CDS | 50.0% | |
| GGATGAGATGGAGTTCACTG+AGG | + | chr4.2:83356852-83356871 | MS.gene99463:CDS | 50.0% | |
| GGCCAATGCGGTAACCAAAT+CGG | + | chr4.2:83354732-83354751 | MS.gene99463:CDS | 50.0% | |
| GGGTGGTAAGCTTGAGAGTA+CGG | - | chr4.2:83356166-83356185 | None:intergenic | 50.0% | |
| GTCAGCTAAACTCCGATCTG+AGG | + | chr4.2:83356374-83356393 | MS.gene99463:CDS | 50.0% | |
| TCAAGATGCTACTGCAGAGG+AGG | + | chr4.2:83356918-83356937 | MS.gene99463:CDS | 50.0% | |
| TCCACCAACAGGGTTGAAGA+TGG | + | chr4.2:83356711-83356730 | MS.gene99463:CDS | 50.0% | |
| TGAAGATGGCTGATGCAGTG+AGG | - | chr4.2:83356576-83356595 | None:intergenic | 50.0% | |
| TGAGATGGAGTTCACTGAGG+CGG | + | chr4.2:83356855-83356874 | MS.gene99463:CDS | 50.0% | |
| TGGAGGAACTGGATCTGGAA+TGG | + | chr4.2:83355947-83355966 | MS.gene99463:CDS | 50.0% | |
| TGTTTGGTCAGAGTGGTGCT+GGG | + | chr4.2:83354976-83354995 | MS.gene99463:CDS | 50.0% | |
| ! | AACTAGCTTACAGCTTGGGG+TGG | - | chr4.2:83356183-83356202 | None:intergenic | 50.0% |
| ! | AGAGTGGTGCTGGGAATAAC+TGG | + | chr4.2:83354985-83355004 | MS.gene99463:CDS | 50.0% |
| ! | GAGTGGTGCTGGGAATAACT+GGG | + | chr4.2:83354986-83355005 | MS.gene99463:CDS | 50.0% |
| ! | GGAGGAACTGGATCTGGAAT+GGG | + | chr4.2:83355948-83355967 | MS.gene99463:CDS | 50.0% |
| ! | GGTAGGGTCGATTCCATGTT+CGG | - | chr4.2:83354784-83354803 | None:intergenic | 50.0% |
| !! | CACATTTGCTGTGTGAGCTC+CGG | - | chr4.2:83356505-83356524 | None:intergenic | 50.0% |
| !! | CTCCGATTTGGTTACCGCAT+TGG | - | chr4.2:83354737-83354756 | None:intergenic | 50.0% |
| !! | TGAGGTATCGTCCGTGTCTA+GGG | - | chr4.2:83356558-83356577 | None:intergenic | 50.0% |
| CGGACACTATCCATAGTCCC+CGG | - | chr4.2:83354915-83354934 | None:intergenic | 55.0% | |
| CGGAGCTCACACAGCAAATG+TGG | + | chr4.2:83356503-83356522 | MS.gene99463:CDS | 55.0% | |
| CGGGGACTATGGATAGTGTC+CGG | + | chr4.2:83354913-83354932 | MS.gene99463:CDS | 55.0% | |
| CTAGGTGGAGGAACTGGATC+TGG | + | chr4.2:83355942-83355961 | MS.gene99463:CDS | 55.0% | |
| GAAGTCGTTTGCGCCGAACA+TGG | + | chr4.2:83354768-83354787 | MS.gene99463:CDS | 55.0% | |
| GCCATCTTCAACCCTGTTGG+TGG | - | chr4.2:83356715-83356734 | None:intergenic | 55.0% | |
| GGATCTTGAACCGGGGACTA+TGG | + | chr4.2:83354902-83354921 | MS.gene99463:CDS | 55.0% | |
| GTGTTTGGTCAGAGTGGTGC+TGG | + | chr4.2:83354975-83354994 | MS.gene99463:CDS | 55.0% | |
| TCAGGGAAGAATACCCGGAC+AGG | + | chr4.2:83355991-83356010 | MS.gene99463:CDS | 55.0% | |
| ! | ATGCGTCGGTGTTCAACAGC+AGG | + | chr4.2:83355434-83355453 | MS.gene99463:intron | 55.0% |
| ! | TGTGCTGCTGACCCTAGACA+CGG | + | chr4.2:83356544-83356563 | MS.gene99463:CDS | 55.0% |
| !! | GTACCGGGCTTTGAGTGTAC+CGG | + | chr4.2:83356483-83356502 | MS.gene99463:CDS | 55.0% |
| !! | GTGAGGTATCGTCCGTGTCT+AGG | - | chr4.2:83356559-83356578 | None:intergenic | 55.0% |
| AGTGTCCGGTCTGGACCGTA+CGG | + | chr4.2:83354927-83354946 | MS.gene99463:CDS | 60.0% | |
| ATCGACCCTACCGGACGCTA+CGG | + | chr4.2:83354792-83354811 | MS.gene99463:CDS | 60.0% | |
| CGTTCCCCGTGCGATTCTGA+TGG | + | chr4.2:83354881-83354900 | MS.gene99463:CDS | 60.0% | |
| GAATCGCACGGGGAACGAAC+CGG | - | chr4.2:83354878-83354897 | None:intergenic | 60.0% | |
| GCTCCGGTACACTCAAAGCC+CGG | - | chr4.2:83356489-83356508 | None:intergenic | 60.0% | |
| TACCACCGTAGCGTCCGGTA+GGG | - | chr4.2:83354800-83354819 | None:intergenic | 60.0% | |
| TCTGACCGTACGGTCCAGAC+CGG | - | chr4.2:83354935-83354954 | None:intergenic | 60.0% | |
| !! | AGAGGTACCACCGTAGCGTC+CGG | - | chr4.2:83354805-83354824 | None:intergenic | 60.0% |
| GTACCACCGTAGCGTCCGGT+AGG | - | chr4.2:83354801-83354820 | None:intergenic | 65.0% | |
| GACCCTACCGGACGCTACGG+TGG | + | chr4.2:83354795-83354814 | MS.gene99463:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 83354705 | 83356993 | 83354705 | ID=MS.gene99463 |
| chr4.2 | mRNA | 83354705 | 83356993 | 83354705 | ID=MS.gene99463.t1;Parent=MS.gene99463 |
| chr4.2 | exon | 83354705 | 83355098 | 83354705 | ID=MS.gene99463.t1.exon1;Parent=MS.gene99463.t1 |
| chr4.2 | CDS | 83354705 | 83355098 | 83354705 | ID=cds.MS.gene99463.t1;Parent=MS.gene99463.t1 |
| chr4.2 | exon | 83355922 | 83356191 | 83355922 | ID=MS.gene99463.t1.exon2;Parent=MS.gene99463.t1 |
| chr4.2 | CDS | 83355922 | 83356191 | 83355922 | ID=cds.MS.gene99463.t1;Parent=MS.gene99463.t1 |
| chr4.2 | exon | 83356308 | 83356993 | 83356308 | ID=MS.gene99463.t1.exon3;Parent=MS.gene99463.t1 |
| chr4.2 | CDS | 83356308 | 83356993 | 83356308 | ID=cds.MS.gene99463.t1;Parent=MS.gene99463.t1 |
| Gene Sequence |
| Protein sequence |
