AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99630.t1 MTR_1g104780 98.853 523 6 0 1 523 1 523 0.0 1051
MS.gene99630.t1 MTR_5g006070 83.008 512 83 2 13 523 13 521 0.0 874
MS.gene99630.t1 MTR_5g006070 82.143 476 81 2 49 523 1 473 0.0 804
MS.gene99630.t1 MTR_1g104770 69.200 500 153 1 1 499 1 500 0.0 721
MS.gene99630.t1 MTR_1g104750 68.800 500 154 2 1 499 1 499 0.0 718
MS.gene99630.t1 MTR_3g008160 56.400 500 211 6 10 507 11 505 0.0 591
MS.gene99630.t1 MTR_5g094760 58.200 500 199 6 1 495 1 495 0.0 588
MS.gene99630.t1 MTR_0204s0020 56.379 486 207 4 13 498 12 492 0.0 587
MS.gene99630.t1 MTR_7g091690 57.600 500 202 6 1 495 1 495 0.0 580
MS.gene99630.t1 MTR_5g082540 56.400 500 214 3 7 505 8 504 0.0 578
MS.gene99630.t1 MTR_0204s0020 55.967 486 206 5 13 498 12 489 0.0 577
MS.gene99630.t1 MTR_0204s0040 52.883 503 231 5 2 503 8 505 0.0 567
MS.gene99630.t1 MTR_4g116770 52.883 503 231 5 2 503 204 701 0.0 565
MS.gene99630.t1 MTR_4g116790 53.094 501 228 5 3 501 6 501 0.0 561
MS.gene99630.t1 MTR_4g091370 57.927 492 203 3 11 500 12 501 0.0 556
MS.gene99630.t1 MTR_1g038630 53.877 503 223 4 12 513 13 507 0.0 553
MS.gene99630.t1 MTR_3g008170 52.976 504 228 7 10 510 11 508 0.0 551
MS.gene99630.t1 MTR_8g102860 53.600 500 227 5 14 512 18 513 0.0 544
MS.gene99630.t1 MTR_6g087040 53.557 506 226 6 1 501 1 502 0.0 538
MS.gene99630.t1 MTR_6g088375 53.557 506 226 6 1 501 1 502 0.0 538
MS.gene99630.t1 MTR_3g008160 55.965 461 196 6 49 507 1 456 0.0 535
MS.gene99630.t1 MTR_5g041550 53.187 502 231 3 1 499 1 501 0.0 534
MS.gene99630.t1 MTR_3g093010 52.233 515 241 3 1 513 1 512 0.0 532
MS.gene99630.t1 MTR_0009s0370 52.410 498 231 3 13 508 12 505 0.0 530
MS.gene99630.t1 MTR_4g090600 54.618 498 220 4 7 501 8 502 0.0 521
MS.gene99630.t1 MTR_1g038600 51.491 503 217 5 12 513 13 489 1.20e-179 514
MS.gene99630.t1 MTR_3g023480 50.916 491 238 2 13 501 12 501 2.13e-177 509
MS.gene99630.t1 MTR_8g102860 53.763 465 210 5 49 512 1 461 1.05e-176 506
MS.gene99630.t1 MTR_3g074410 47.992 523 249 11 1 514 1 509 5.78e-174 500
MS.gene99630.t1 MTR_3g074390 48.178 494 248 6 16 506 22 510 2.01e-173 499
MS.gene99630.t1 MTR_3g074270 46.733 505 243 6 1 503 1 481 2.69e-168 485
MS.gene99630.t1 MTR_3g007910 49.102 501 220 5 1 499 1 468 1.04e-165 478
MS.gene99630.t1 MTR_3g093060 53.982 452 204 3 49 497 1 451 6.12e-163 470
MS.gene99630.t1 MTR_4g116790 50.138 363 176 3 3 363 6 365 1.61e-132 390
MS.gene99630.t1 MTR_3g074380 50.287 348 165 5 16 360 20 362 3.71e-116 348
MS.gene99630.t1 MTR_3g074340 45.031 322 171 5 188 506 20 338 1.94e-102 311
MS.gene99630.t1 MTR_3g074320 45.031 322 171 5 188 506 20 338 1.96e-102 311
MS.gene99630.t1 MTR_3g074370 44.615 325 173 6 188 509 20 340 7.57e-102 310
MS.gene99630.t1 MTR_3g074400 37.199 457 226 11 49 481 1 420 7.02e-91 285
MS.gene99630.t1 MTR_6g088450 30.303 462 285 8 27 476 63 499 9.04e-58 200
MS.gene99630.t1 MTR_7g005910 29.980 507 311 13 11 505 22 496 1.18e-57 200
MS.gene99630.t1 MTR_4g069500 29.457 516 313 12 25 515 32 521 3.55e-56 196
MS.gene99630.t1 MTR_3g116240 29.158 487 285 10 26 483 32 487 8.83e-56 195
MS.gene99630.t1 MTR_4g072030 28.106 491 305 9 26 496 31 493 1.83e-54 192
MS.gene99630.t1 MTR_4g069500 30.612 441 277 8 99 515 36 471 2.27e-54 190
MS.gene99630.t1 MTR_3g084110 28.600 500 326 10 11 504 17 491 2.50e-54 191
MS.gene99630.t1 MTR_1g116660 29.389 524 322 14 5 517 14 500 2.57e-54 191
MS.gene99630.t1 MTR_1g116650 28.715 498 315 9 5 496 57 520 1.57e-53 189
MS.gene99630.t1 MTR_8g103500 28.310 491 312 10 7 483 3 467 2.15e-53 188
MS.gene99630.t1 MTR_7g446340 27.071 495 320 10 23 505 55 520 8.99e-52 184
MS.gene99630.t1 MTR_6g007340 27.071 495 320 10 23 505 55 520 8.99e-52 184
MS.gene99630.t1 MTR_5g096000 44.783 230 87 4 1 223 1 197 1.18e-50 176
MS.gene99630.t1 MTR_5g096000 51.880 133 63 1 367 499 168 299 6.18e-34 130
MS.gene99630.t1 MTR_8g077890 29.530 447 286 7 83 505 59 500 7.33e-50 179
MS.gene99630.t1 MTR_5g075300 29.452 438 280 7 89 502 65 497 7.88e-50 179
MS.gene99630.t1 MTR_2g013310 29.487 390 260 6 103 483 40 423 1.22e-49 177
MS.gene99630.t1 MTR_4g077740 28.803 493 304 11 10 486 38 499 1.23e-49 178
MS.gene99630.t1 MTR_2g013310 27.966 472 301 10 23 483 53 496 2.87e-49 177
MS.gene99630.t1 MTR_7g113970 27.572 486 306 8 10 483 40 491 5.69e-48 174
MS.gene99630.t1 MTR_2g049020 32.345 371 221 8 20 382 24 372 2.21e-45 168
MS.gene99630.t1 MTR_6g018790 28.903 474 293 11 18 485 105 540 3.14e-45 167
MS.gene99630.t1 MTR_7g113960 27.789 475 304 9 12 483 16 454 5.57e-45 165
MS.gene99630.t1 MTR_7g082270 29.325 474 291 12 20 487 67 502 3.79e-44 163
MS.gene99630.t1 MTR_5g077580 26.957 575 296 15 20 501 24 567 5.38e-44 164
MS.gene99630.t1 MTR_3g074330 50.311 161 68 4 1 152 1 158 3.17e-43 152
MS.gene99630.t1 MTR_3g074360 50.311 161 68 4 1 152 1 158 3.17e-43 152
MS.gene99630.t1 MTR_8g077310 30.709 381 250 6 107 483 14 384 3.69e-43 158
MS.gene99630.t1 MTR_8g077310 30.709 381 250 6 107 483 111 481 9.99e-43 159
MS.gene99630.t1 MTR_3g074310 49.689 161 69 4 1 152 1 158 1.77e-42 150
MS.gene99630.t1 MTR_2g048720 31.563 339 204 7 20 352 24 340 4.08e-42 159
MS.gene99630.t1 MTR_1g022315 30.829 386 248 7 107 485 14 387 1.10e-41 154
MS.gene99630.t1 MTR_1g022315 30.829 386 248 7 107 485 113 486 3.84e-41 154
MS.gene99630.t1 MTR_7g082270 29.327 416 255 10 20 432 67 446 8.72e-41 153
MS.gene99630.t1 MTR_1g038620 47.134 157 66 1 204 360 50 189 1.05e-40 145
MS.gene99630.t1 MTR_8g077300 30.000 380 252 5 108 483 104 473 1.52e-40 153
MS.gene99630.t1 MTR_2g026160 28.715 397 247 9 1 382 1 376 4.94e-40 153
MS.gene99630.t1 MTR_4g118610 30.390 385 248 7 104 483 113 482 5.79e-40 151
MS.gene99630.t1 MTR_2g020710 27.406 478 310 10 9 483 36 479 9.83e-40 150
MS.gene99630.t1 MTR_5g020270 29.474 380 256 5 107 483 14 384 7.81e-39 146
MS.gene99630.t1 MTR_2g020710 29.504 383 254 7 104 483 21 390 1.07e-38 146
MS.gene99630.t1 MTR_5g020270 29.474 380 256 5 107 483 114 484 1.83e-38 147
MS.gene99630.t1 MTR_5g019870 27.166 427 289 7 78 483 50 475 1.44e-37 145
MS.gene99630.t1 MTR_3g080240 27.317 410 271 11 88 487 139 531 2.22e-37 145
MS.gene99630.t1 MTR_7g094450 26.044 407 286 5 83 487 80 473 3.71e-37 143
MS.gene99630.t1 MTR_7g094110 26.781 407 283 5 83 487 82 475 2.43e-36 141
MS.gene99630.t1 MTR_4g013205 24.722 449 321 8 46 491 42 476 3.61e-35 137
MS.gene99630.t1 MTR_4g069500 29.254 335 208 8 205 515 3 332 1.10e-32 127
MS.gene99630.t1 MTR_4g064820 30.352 369 219 10 6 352 75 427 2.79e-32 129
MS.gene99630.t1 MTR_6g087910 25.897 390 273 7 46 433 56 431 3.64e-32 129
MS.gene99630.t1 MTR_0064s0040 43.046 151 72 3 11 161 13 149 2.19e-31 119
MS.gene99630.t1 MTR_7g113970 26.500 400 250 8 10 397 40 407 1.46e-30 124
MS.gene99630.t1 MTR_8g077310 32.000 275 173 5 107 376 111 376 1.72e-30 123
MS.gene99630.t1 MTR_5g020270 27.704 379 243 7 107 483 114 463 2.52e-30 124
MS.gene99630.t1 MTR_7g113960 27.649 387 243 10 12 395 16 368 6.08e-30 121
MS.gene99630.t1 MTR_2g026140 28.022 364 219 11 28 381 30 360 5.42e-29 121
MS.gene99630.t1 MTR_2g020710 26.241 423 275 9 9 428 36 424 2.14e-28 117
MS.gene99630.t1 MTR_2g020710 26.471 408 263 9 9 413 36 409 4.05e-28 116
MS.gene99630.t1 MTR_4g118610 28.487 337 221 7 83 414 92 413 1.46e-27 115
MS.gene99630.t1 MTR_7g094110 25.553 407 268 6 83 487 82 455 2.79e-27 114
MS.gene99630.t1 MTR_2g020710 26.519 362 232 8 9 367 36 366 1.01e-24 106
MS.gene99630.t1 MTR_1g114280 38.710 155 74 4 347 500 21 155 2.17e-24 99.8
MS.gene99630.t1 MTR_3g116060 33.523 176 114 3 88 261 48 222 1.23e-17 86.7
MS.gene99630.t1 MTR_3g116060 27.888 251 151 10 257 485 473 715 4.36e-14 75.5
MS.gene99630.t1 MTR_3g118530 30.978 184 124 3 88 269 50 232 1.72e-16 83.2
MS.gene99630.t1 MTR_3g118530 23.887 247 158 7 257 481 483 721 2.78e-11 66.6
MS.gene99630.t1 MTR_3g118530 30.978 184 124 3 88 269 50 232 2.15e-16 82.8
MS.gene99630.t1 MTR_5g024740 25.311 241 157 5 22 260 4 223 4.35e-16 82.0
MS.gene99630.t1 MTR_5g024740 27.273 264 161 7 235 481 454 703 8.63e-12 68.2
MS.gene99630.t1 MTR_8g073100 29.570 186 127 4 84 267 47 230 1.11e-14 77.4
MS.gene99630.t1 MTR_8g073100 27.953 254 154 6 241 481 462 699 3.49e-14 75.9
MS.gene99630.t1 MTR_6g006260 37.398 123 66 4 239 352 32 152 1.55e-14 73.6
MS.gene99630.t1 MTR_5g044910 25.281 178 131 2 84 260 47 223 1.88e-14 76.6
MS.gene99630.t1 MTR_5g044910 27.897 233 149 5 264 485 481 705 1.58e-11 67.4
MS.gene99630.t1 MTR_6g006260 37.398 123 66 4 239 352 33 153 3.55e-14 73.2
MS.gene99630.t1 MTR_1g093115 51.667 60 28 1 161 219 1 60 3.58e-12 62.0
MS.gene99630.t1 MTR_6g006260 38.384 99 56 3 256 352 1 96 3.01e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99630.t1 AT5G26340 76.879 519 118 2 1 518 1 518 0.0 830
MS.gene99630.t1 AT4G02050 55.945 513 215 6 1 507 1 508 0.0 603
MS.gene99630.t1 AT4G02050 55.945 513 215 6 1 507 1 508 0.0 603
MS.gene99630.t1 AT1G11260 55.426 516 225 4 1 513 1 514 0.0 584
MS.gene99630.t1 AT1G77210 56.436 505 211 7 1 500 1 501 0.0 571
MS.gene99630.t1 AT1G77210 56.436 505 211 7 1 500 1 501 0.0 571
MS.gene99630.t1 AT5G23270 55.666 503 219 3 1 500 1 502 0.0 567
MS.gene99630.t1 AT5G26250 57.968 502 206 4 7 507 7 504 0.0 565
MS.gene99630.t1 AT3G19940 54.004 487 220 4 18 503 21 504 0.0 561
MS.gene99630.t1 AT1G50310 54.918 488 215 5 18 503 21 505 0.0 559
MS.gene99630.t1 AT3G05960 57.256 503 209 4 7 507 6 504 0.0 558
MS.gene99630.t1 AT4G21480 54.819 498 219 4 8 503 9 502 0.0 540
MS.gene99630.t1 AT3G19930 50.607 494 240 3 12 504 13 503 0.0 525
MS.gene99630.t1 AT3G19930 50.607 494 240 3 12 504 13 503 0.0 525
MS.gene99630.t1 AT1G34580 47.843 510 247 8 1 499 1 502 6.20e-171 493
MS.gene99630.t1 AT1G07340 51.633 490 232 3 12 500 13 498 4.83e-169 488
MS.gene99630.t1 AT5G61520 48.297 499 247 7 16 508 18 511 3.51e-163 473
MS.gene99630.t1 AT1G34580 47.484 457 229 6 49 499 1 452 2.89e-152 443
MS.gene99630.t1 AT5G61520 47.109 467 236 6 48 508 2 463 2.12e-146 429
MS.gene99630.t1 AT1G77210 58.286 350 142 4 152 500 6 352 2.94e-144 419
MS.gene99630.t1 AT1G50310 53.955 354 159 4 152 503 11 362 6.77e-140 409
MS.gene99630.t1 AT2G18480 30.297 472 281 10 36 485 36 481 2.32e-59 204
MS.gene99630.t1 AT2G16130 29.730 481 290 8 26 483 30 485 4.59e-58 201
MS.gene99630.t1 AT2G16120 30.544 478 290 10 26 483 30 485 6.13e-58 201
MS.gene99630.t1 AT4G36670 30.162 494 296 10 13 483 8 475 1.52e-56 197
MS.gene99630.t1 AT3G18830 28.750 480 299 7 26 485 40 496 1.10e-55 195
MS.gene99630.t1 AT2G20780 28.189 486 308 10 10 483 40 496 7.74e-52 185
MS.gene99630.t1 AT5G59250 32.041 490 282 13 22 489 98 558 4.29e-51 183
MS.gene99630.t1 AT2G43330 28.842 475 306 10 26 493 35 484 3.78e-50 180
MS.gene99630.t1 AT2G20780 29.024 410 274 6 83 483 37 438 1.66e-49 177
MS.gene99630.t1 AT1G30220 30.051 396 239 9 1 381 1 373 4.80e-48 175
MS.gene99630.t1 AT1G08930 30.833 480 287 13 10 483 47 487 1.86e-47 172
MS.gene99630.t1 AT1G08930 30.833 480 287 13 10 483 47 487 1.86e-47 172
MS.gene99630.t1 AT5G27350 27.536 483 313 10 10 490 20 467 9.01e-46 167
MS.gene99630.t1 AT3G05165 26.250 480 309 9 10 483 19 459 1.50e-45 166
MS.gene99630.t1 AT3G05165 26.250 480 309 9 10 483 19 459 1.50e-45 166
MS.gene99630.t1 AT3G05165 26.250 480 309 9 10 483 19 459 1.50e-45 166
MS.gene99630.t1 AT5G17010 29.412 493 280 13 23 486 48 501 1.57e-45 167
MS.gene99630.t1 AT5G17010 29.412 493 280 13 23 486 48 501 1.57e-45 167
MS.gene99630.t1 AT5G17010 29.412 493 280 13 23 486 48 501 1.57e-45 167
MS.gene99630.t1 AT3G03090 30.297 472 289 14 30 486 55 501 1.94e-45 167
MS.gene99630.t1 AT1G08890 30.807 409 264 8 83 487 67 460 1.04e-44 164
MS.gene99630.t1 AT1G08900 31.514 403 257 6 85 483 25 412 6.16e-44 161
MS.gene99630.t1 AT1G08900 31.514 403 257 6 85 483 59 446 1.23e-43 161
MS.gene99630.t1 AT1G08900 31.514 403 257 6 85 483 67 454 1.39e-43 161
MS.gene99630.t1 AT1G08900 31.514 403 257 6 85 483 67 454 1.39e-43 161
MS.gene99630.t1 AT3G05160 26.250 480 309 10 10 483 10 450 3.31e-43 160
MS.gene99630.t1 AT5G27360 26.337 486 315 9 10 490 24 471 1.70e-42 158
MS.gene99630.t1 AT5G16150 28.125 480 301 11 10 483 97 538 2.56e-42 159
MS.gene99630.t1 AT5G16150 28.125 480 301 11 10 483 97 538 2.56e-42 159
MS.gene99630.t1 AT5G16150 28.125 480 301 11 10 483 97 538 2.56e-42 159
MS.gene99630.t1 AT3G05400 28.542 480 297 13 11 483 15 455 3.06e-42 157
MS.gene99630.t1 AT1G75220 29.747 474 289 11 19 483 44 482 3.27e-42 157
MS.gene99630.t1 AT3G05160 27.654 405 270 6 85 483 14 401 3.43e-42 156
MS.gene99630.t1 AT3G05160 27.654 405 270 6 85 483 14 401 3.43e-42 156
MS.gene99630.t1 AT5G18840 28.467 411 278 6 83 490 84 481 5.12e-42 157
MS.gene99630.t1 AT5G27360 26.337 486 315 9 10 490 72 519 5.97e-42 157
MS.gene99630.t1 AT2G48020 27.027 407 282 5 83 487 68 461 1.74e-40 152
MS.gene99630.t1 AT2G48020 27.027 407 282 5 83 487 68 461 1.74e-40 152
MS.gene99630.t1 AT3G05165 25.486 463 300 9 1 457 10 433 2.72e-40 152
MS.gene99630.t1 AT1G05030 27.991 443 300 10 46 483 85 513 4.28e-40 152
MS.gene99630.t1 AT1G05030 28.049 410 278 9 79 483 64 461 1.88e-39 149
MS.gene99630.t1 AT4G16480 30.728 371 214 9 1 352 1 347 2.83e-39 151
MS.gene99630.t1 AT4G16480 30.728 371 214 9 1 352 1 347 2.83e-39 151
MS.gene99630.t1 AT4G16480 30.728 371 214 9 1 352 1 347 2.83e-39 151
MS.gene99630.t1 AT3G05165 27.356 435 270 11 1 428 10 405 3.28e-39 149
MS.gene99630.t1 AT3G05165 27.356 435 270 11 1 428 10 405 3.28e-39 149
MS.gene99630.t1 AT3G05155 25.732 478 315 9 12 486 17 457 5.83e-39 148
MS.gene99630.t1 AT1G54730 26.998 463 300 9 28 487 38 465 1.75e-38 147
MS.gene99630.t1 AT3G05150 26.369 493 318 10 10 491 23 481 1.97e-38 147
MS.gene99630.t1 AT3G05150 27.044 477 311 9 10 483 23 465 2.85e-38 146
MS.gene99630.t1 AT3G05150 27.044 477 311 9 10 483 23 465 2.85e-38 146
MS.gene99630.t1 AT1G08920 26.483 472 309 9 15 483 25 461 4.72e-38 145
MS.gene99630.t1 AT2G35740 30.504 377 223 12 20 382 24 375 5.31e-38 147
MS.gene99630.t1 AT5G27360 27.368 380 261 6 113 490 1 367 9.07e-38 143
MS.gene99630.t1 AT5G27360 27.368 380 261 6 113 490 1 367 9.07e-38 143
MS.gene99630.t1 AT1G19450 28.238 471 300 10 19 483 45 483 1.56e-37 144
MS.gene99630.t1 AT1G08920 26.050 476 313 9 15 483 25 468 6.16e-36 140
MS.gene99630.t1 AT3G05400 27.292 480 283 14 11 483 15 435 1.19e-35 138
MS.gene99630.t1 AT1G08900 30.663 362 232 6 85 442 67 413 1.24e-35 138
MS.gene99630.t1 AT1G08920 26.471 442 287 9 15 453 25 431 3.04e-34 134
MS.gene99630.t1 AT1G54730 25.581 430 284 7 28 455 38 433 9.04e-34 133
MS.gene99630.t1 AT4G04760 29.610 385 253 7 104 483 33 404 1.32e-33 132
MS.gene99630.t1 AT4G04760 29.610 385 253 7 104 483 92 463 2.96e-33 132
MS.gene99630.t1 AT4G04750 26.702 382 263 6 106 483 99 467 1.04e-32 130
MS.gene99630.t1 AT4G04750 26.702 382 263 6 106 483 99 467 1.04e-32 130
MS.gene99630.t1 AT4G04750 26.702 382 263 6 106 483 143 511 1.06e-32 131
MS.gene99630.t1 AT1G54730 25.799 407 266 6 83 487 72 444 1.33e-31 127
MS.gene99630.t1 AT1G79820 26.351 444 304 9 46 483 60 486 3.07e-31 127
MS.gene99630.t1 AT1G79820 26.351 444 304 9 46 483 60 486 3.07e-31 127
MS.gene99630.t1 AT1G67300 24.717 441 318 7 46 483 57 486 4.29e-31 126
MS.gene99630.t1 AT1G67300 24.752 404 286 8 46 446 57 445 1.82e-30 124
MS.gene99630.t1 AT1G67300 24.752 404 286 8 46 446 57 445 1.82e-30 124
MS.gene99630.t1 AT5G27360 25.962 416 265 9 10 420 24 401 2.69e-30 123
MS.gene99630.t1 AT1G67300 24.887 442 315 8 46 483 57 485 4.82e-30 123
MS.gene99630.t1 AT1G67300 24.887 442 315 8 46 483 57 485 4.82e-30 123
MS.gene99630.t1 AT1G79820 26.154 390 272 7 46 433 60 435 7.21e-30 122
MS.gene99630.t1 AT1G67300 25.330 379 267 7 46 421 57 422 9.43e-30 121
MS.gene99630.t1 AT1G67300 25.330 379 267 7 46 421 57 422 9.43e-30 121
MS.gene99630.t1 AT1G54730 26.700 397 253 9 28 421 38 399 1.41e-28 118
MS.gene99630.t1 AT1G54730 26.700 397 253 9 28 421 38 399 1.41e-28 118
MS.gene99630.t1 AT4G04760 27.877 391 249 8 104 483 92 460 2.33e-27 115
MS.gene99630.t1 AT2G48020 28.707 317 209 5 83 397 68 369 2.44e-27 114
MS.gene99630.t1 AT1G54730 25.600 375 243 7 83 455 72 412 3.26e-27 114
MS.gene99630.t1 AT1G54730 27.523 327 204 6 28 352 38 333 7.35e-26 108
MS.gene99630.t1 AT3G05155 25.656 343 219 8 12 352 17 325 2.75e-25 107
MS.gene99630.t1 AT5G17010 25.358 489 245 12 23 486 45 438 1.53e-24 106
MS.gene99630.t1 AT2G48020 29.412 272 180 4 83 352 68 329 1.98e-24 105
MS.gene99630.t1 AT3G20460 23.415 410 297 6 83 489 93 488 1.07e-23 104
MS.gene99630.t1 AT1G54730 26.910 301 190 5 28 326 38 310 7.43e-23 100
MS.gene99630.t1 AT1G54730 26.910 301 190 5 28 326 38 310 7.43e-23 100
MS.gene99630.t1 AT1G54730 25.513 341 218 7 83 421 72 378 2.18e-22 99.8
MS.gene99630.t1 AT1G79820 24.099 444 266 10 46 483 60 438 1.92e-18 88.2
MS.gene99630.t1 AT3G51490 30.601 183 124 3 88 269 2 182 2.06e-17 85.9
MS.gene99630.t1 AT3G51490 27.126 247 145 9 260 485 436 668 1.73e-14 76.6
MS.gene99630.t1 AT3G51490 30.601 183 124 3 88 269 52 232 2.47e-17 85.9
MS.gene99630.t1 AT3G51490 30.601 183 124 3 88 269 52 232 2.77e-17 85.9
MS.gene99630.t1 AT3G51490 27.126 247 145 9 260 485 486 718 2.33e-14 76.6
MS.gene99630.t1 AT1G20840 33.000 200 123 6 77 267 31 228 6.03e-16 81.6
MS.gene99630.t1 AT1G20840 33.000 200 123 6 77 267 31 228 6.03e-16 81.6
MS.gene99630.t1 AT1G79820 24.224 322 183 6 126 446 77 338 3.33e-15 77.8
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.44e-14 75.5
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 473 714 2.53e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.44e-14 75.5
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 473 714 2.53e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.44e-14 75.5
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 473 714 2.53e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.63e-14 75.1
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.37e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.63e-14 75.1
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.37e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.63e-14 75.1
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.37e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.63e-14 75.1
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.37e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.63e-14 75.1
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.37e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.63e-14 75.1
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.37e-11 67.0
MS.gene99630.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.63e-14 75.1
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.37e-11 67.0
MS.gene99630.t1 AT4G35300 26.000 250 156 7 257 485 286 527 3.48e-11 66.2

Find 130 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTATGATGTTGGAGTTTC+AGG 0.113291 1.4:+80652328 MS.gene99630:CDS
ATTCACTTCATCATTGTATT+TGG 0.179815 1.4:+80652742 MS.gene99630:CDS
CTTTACTCTGCTGTGATTAC+TGG 0.220334 1.4:+80656681 MS.gene99630:CDS
CCAGCATTACTCCTCACTTT+AGG 0.220398 1.4:+80656046 MS.gene99630:CDS
CCACGTTCAATGAGACTATT+TGG 0.243632 1.4:-80656091 None:intergenic
CAGCATTACTCCTCACTTTA+GGG 0.249351 1.4:+80656047 MS.gene99630:CDS
AATATATTCGGTTGATAAAC+TGG 0.252057 1.4:+80656734 MS.gene99630:CDS
GTCTTACTTGGCTGTGGAAT+TGG 0.261288 1.4:+80652911 MS.gene99630:CDS
TGTCATTTCCATTGCCCTAA+TGG 0.296156 1.4:+80656267 MS.gene99630:CDS
ATGCTTTGTTATTTCAAGTT+TGG 0.300180 1.4:+80657053 MS.gene99630:CDS
TGTGGAAGCAGCATTGGTTT+TGG 0.334417 1.4:+80657180 MS.gene99630:CDS
CATTATCATTTCATGCATAA+TGG 0.342417 1.4:+80652282 MS.gene99630:CDS
TTGGGGTTGGAGGATATCTC+TGG 0.356303 1.4:+80656009 MS.gene99630:CDS
CCAGTTCTGTTCAACACATT+GGG 0.363609 1.4:+80656639 MS.gene99630:CDS
GGTCATGGGGTCCACTTGCT+TGG 0.367069 1.4:+80656922 MS.gene99630:CDS
ATAGGGACATTCTTTGTCTC+AGG 0.372635 1.4:-80657137 None:intergenic
AACGATAGTCTCAATATATT+CGG 0.386732 1.4:+80656722 MS.gene99630:CDS
CTTATGTTTGGTTATGATGT+TGG 0.388237 1.4:+80652319 MS.gene99630:CDS
CACGTTCAATGAGACTATTT+GGG 0.388376 1.4:-80656090 None:intergenic
GCCACCGGAGGTCTTATGTT+TGG 0.389666 1.4:+80652307 MS.gene99630:CDS
TTTAGGGGCTTGCTTGGTAG+TGG 0.390067 1.4:+80656063 MS.gene99630:CDS
ATTGTATTTGGCGGGTTTAA+CGG 0.394528 1.4:+80652754 MS.gene99630:CDS
TTTCAGCTTGATATCACTCT+TGG 0.399756 1.4:+80654863 MS.gene99630:CDS
TGGAGGATATCTCTGGGATT+GGG 0.399827 1.4:+80656016 MS.gene99630:CDS
CACTTCATCATTGTATTTGG+CGG 0.400462 1.4:+80652745 MS.gene99630:CDS
TAACAGAATCAAAGGTCATT+GGG 0.402246 1.4:+80655991 MS.gene99630:intron
CCCAATGTGTTGAACAGAAC+TGG 0.402584 1.4:-80656639 None:intergenic
GCAATCTCTGAAAGGAAAAC+TGG 0.403056 1.4:-80654806 None:intergenic
TTGGAGGATATCTCTGGGAT+TGG 0.417371 1.4:+80656015 MS.gene99630:CDS
AACTGGAGCATAGAACATTA+TGG 0.417549 1.4:-80656622 None:intergenic
CCTCACTTTAGGGGCTTGCT+TGG 0.425384 1.4:+80656057 MS.gene99630:CDS
AATGCTCCACGTATTCTTGA+AGG 0.430135 1.4:-80654830 None:intergenic
GCTGGCTTCTTCTTCATAGC+TGG 0.430415 1.4:+80652836 MS.gene99630:CDS
ATGCATGAAATGATAATGAT+AGG 0.430983 1.4:-80652277 None:intergenic
AAGATTAGTACAAACCATTA+GGG 0.436585 1.4:-80656281 None:intergenic
TGTCAGCATTTGCATGGTCA+TGG 0.444330 1.4:+80656907 MS.gene99630:CDS
TTTGTGTCATCTCTTCAATA+GGG 0.447342 1.4:-80657154 None:intergenic
TCTTATACAACTCGAGTACT+AGG 0.451742 1.4:+80652791 MS.gene99630:CDS
ATCGTTGGTAGGGTCTTACT+TGG 0.458508 1.4:+80652899 MS.gene99630:CDS
CCACTAGAGACTCGTTCTGC+AGG 0.462076 1.4:+80656966 MS.gene99630:CDS
GTCAGCATTTGCATGGTCAT+GGG 0.464567 1.4:+80656908 MS.gene99630:CDS
TCAAATGTTCTTGTCACAAA+TGG 0.472443 1.4:+80656788 MS.gene99630:CDS
ATAACAGAATCAAAGGTCAT+TGG 0.475393 1.4:+80655990 MS.gene99630:intron
CTCTACTAACTCTAAGAACT+CGG 0.481529 1.4:-80656173 None:intergenic
CTGCTAGGGGAATTTCCACC+AGG 0.483891 1.4:-80657245 None:intergenic
CAGATATTTCAGCAATTCAC+TGG 0.497047 1.4:+80656591 MS.gene99630:intron
ATAAGGAACTTACTTGTTGG+TGG 0.500032 1.4:-80654915 None:intergenic
GAACGTGGTCACTTGGACAA+AGG 0.500261 1.4:+80656106 MS.gene99630:CDS
TCCAGTTCTGTTCAACACAT+TGG 0.500531 1.4:+80656638 MS.gene99630:CDS
GGCAAGTCGTGTTGCTAAAG+AGG 0.500547 1.4:+80656195 MS.gene99630:CDS
GAATCAAAGGTCATTGGGGT+TGG 0.506170 1.4:+80655996 MS.gene99630:intron
CGGCAACGACAGAGAATTTG+AGG 0.506930 1.4:+80652243 MS.gene99630:CDS
ACTTCATCATTGTATTTGGC+GGG 0.508139 1.4:+80652746 MS.gene99630:CDS
GGTAGGGTCTTACTTGGCTG+TGG 0.508697 1.4:+80652905 MS.gene99630:CDS
TGGAAAGAACTTCTTCAAGA+AGG 0.515645 1.4:-80652642 None:intergenic
CCTAAAGTGAGGAGTAATGC+TGG 0.516671 1.4:-80656046 None:intergenic
AGACAAGATCATTTCTGCTA+GGG 0.518011 1.4:-80657259 None:intergenic
TCAAAGGTCATTGGGGTTGG+AGG 0.518817 1.4:+80655999 MS.gene99630:CDS
CTTTCGAGAGTTCCTCAGAA+TGG 0.520137 1.4:-80656845 None:intergenic
AGTTGTATAAGACGCGAAGA+AGG 0.523063 1.4:-80652780 None:intergenic
CTTGAAGAAGTTCTTTCCAA+CGG 0.529312 1.4:+80652646 MS.gene99630:CDS
TCTCATTGAACGTGGTCACT+TGG 0.531256 1.4:+80656099 MS.gene99630:CDS
TTCTCATGCTCATCGTTGGT+AGG 0.531973 1.4:+80652888 MS.gene99630:CDS
AGACAGACGACGGAATCAGA+TGG 0.534245 1.4:+80652674 MS.gene99630:CDS
CATTCTTTGTCTCAGGGACA+AGG 0.534348 1.4:-80657130 None:intergenic
TCTAGTGGAAATATCTCACT+TGG 0.540947 1.4:-80656951 None:intergenic
TGGAATTGGATTTGCAAACC+AGG 0.541646 1.4:+80652925 MS.gene99630:CDS
TAATTAACCATGACGGGAGG+AGG 0.541762 1.4:+80652211 None:intergenic
TGCAGCTCTTGTAGTTGTGA+TGG 0.545486 1.4:+80656872 MS.gene99630:CDS
TGGGGTTGGAGGATATCTCT+GGG 0.548277 1.4:+80656010 MS.gene99630:CDS
TGAAATAACAAAGCATTGAA+AGG 0.549846 1.4:-80657046 None:intergenic
GGAAAGAACTTCTTCAAGAA+GGG 0.551194 1.4:-80652641 None:intergenic
GAGACAAGATCATTTCTGCT+AGG 0.551671 1.4:-80657260 None:intergenic
AGGCTCACAATGTTGATCGC+TGG 0.555620 1.4:+80652818 MS.gene99630:CDS
CACTAGAGACTCGTTCTGCA+GGG 0.555738 1.4:+80656967 MS.gene99630:CDS
AGCATTACTCCTCACTTTAG+GGG 0.556506 1.4:+80656048 MS.gene99630:CDS
TCTCATGCTCATCGTTGGTA+GGG 0.559362 1.4:+80652889 MS.gene99630:CDS
AACCTTCTCATGCTCATCGT+TGG 0.561672 1.4:+80652884 MS.gene99630:CDS
GTCGTCTGTCTCAAGACCGT+TGG 0.563013 1.4:-80652662 None:intergenic
GCTGAAGCCTCCTCCCGTCA+TGG 0.565815 1.4:-80652218 None:intergenic
TTGAAGGTGCAATCTCTGAA+AGG 0.568570 1.4:-80654814 None:intergenic
TGCATAATGGCTGCCACCGG+AGG 0.573918 1.4:+80652295 MS.gene99630:CDS
GAGGTCGGTTATTGCGCTTG+AGG 0.575455 1.4:-80656240 None:intergenic
CGAAAGCTATTACTCGAAGC+TGG 0.575954 1.4:+80656762 MS.gene99630:CDS
CAACTCGAGTACTAGGAAGA+AGG 0.577102 1.4:+80652798 MS.gene99630:CDS
AGTACAAACCATTAGGGCAA+TGG 0.580130 1.4:-80656275 None:intergenic
ATGACGGGAGGAGGCTTCAG+CGG 0.582980 1.4:+80652220 MS.gene99630:CDS
GCTGTTCTGAGAAAGATTCG+TGG 0.584754 1.4:+80656133 MS.gene99630:CDS
ACGGGAGGAGGCTTCAGCGG+CGG 0.586483 1.4:+80652223 MS.gene99630:CDS
GTGCAATGACAGCAGTGAAG+AGG 0.587387 1.4:-80657016 None:intergenic
CGCTTGAGGAGATTTCTGAA+CGG 0.588562 1.4:-80656226 None:intergenic
TAGGGACATTCTTTGTCTCA+GGG 0.588827 1.4:-80657136 None:intergenic
TCATGCATAATGGCTGCCAC+CGG 0.589627 1.4:+80652292 MS.gene99630:CDS
CTAAAGTGAGGAGTAATGCT+GGG 0.591713 1.4:-80656045 None:intergenic
CGAGTTCTTAGAGTTAGTAG+AGG 0.593514 1.4:+80656174 MS.gene99630:CDS
ATGGTGATAGCAATTGTACT+AGG 0.593741 1.4:+80656807 MS.gene99630:CDS
ATTCTGAGGAACTCTCGAAA+GGG 0.594512 1.4:+80656847 MS.gene99630:CDS
GACAAGATCATTTCTGCTAG+GGG 0.594712 1.4:-80657258 None:intergenic
CATTCTGAGGAACTCTCGAA+AGG 0.596408 1.4:+80656846 MS.gene99630:CDS
GACAGACGACGGAATCAGAT+GGG 0.599473 1.4:+80652675 MS.gene99630:CDS
CTCTGAAAGGAAAACTGGCA+CGG 0.599482 1.4:-80654801 None:intergenic
CCTGCAGAACGAGTCTCTAG+TGG 0.601195 1.4:-80656966 None:intergenic
TCTTTGCATAACAGAATCAA+AGG 0.602087 1.4:+80655983 MS.gene99630:intron
AAGTGAATAGCTGCAACCCT+TGG 0.602447 1.4:-80652727 None:intergenic
ATATATTCGGTTGATAAACT+GGG 0.603944 1.4:+80656735 MS.gene99630:CDS
ATAACCAAACATAAGACCTC+CGG 0.610933 1.4:-80652311 None:intergenic
TGTTGGTGGCATAGTTGACA+AGG 0.611158 1.4:-80654901 None:intergenic
AGGATATCTCTGGGATTGGG+AGG 0.614479 1.4:+80656019 MS.gene99630:CDS
ATTGAAGATGAGAAAGTACC+TGG 0.615199 1.4:+80657227 MS.gene99630:CDS
TCAGCATTTGCATGGTCATG+GGG 0.621192 1.4:+80656909 MS.gene99630:CDS
CAAAGTGAAGGACCATTCTG+AGG 0.625954 1.4:+80656833 MS.gene99630:CDS
GCAATGGAAATGACAAGTTG+AGG 0.629289 1.4:-80656259 None:intergenic
TACTGCAAATACGATAACCA+AGG 0.630998 1.4:+80652710 MS.gene99630:CDS
AAGAACTTCTTCAAGAAGGG+TGG 0.634008 1.4:-80652638 None:intergenic
CCAAGCAAGCCCCTAAAGTG+AGG 0.638103 1.4:-80656057 None:intergenic
TCTGAGAAAGATTCGTGGCA+CGG 0.641034 1.4:+80656138 MS.gene99630:CDS
TCTACTAACTCTAAGAACTC+GGG 0.642028 1.4:-80656172 None:intergenic
TGTACTAGGAATCAAAGTGA+AGG 0.642063 1.4:+80656821 MS.gene99630:CDS
TGGAAATGACAAGTTGAGGT+CGG 0.646516 1.4:-80656255 None:intergenic
ACGTTCAATGAGACTATTTG+GGG 0.648447 1.4:-80656089 None:intergenic
ACTGCAAATACGATAACCAA+GGG 0.652200 1.4:+80652711 MS.gene99630:CDS
TACCAACGATGAGCATGAGA+AGG 0.652678 1.4:-80652886 None:intergenic
CTTGGAATAAGCCAAGCAAG+TGG 0.653091 1.4:-80656933 None:intergenic
AACAGAATCAAAGGTCATTG+GGG 0.657099 1.4:+80655992 MS.gene99630:intron
CCAAATAGTCTCATTGAACG+TGG 0.670098 1.4:+80656091 MS.gene99630:CDS
ACCAAACATAAGACCTCCGG+TGG 0.683703 1.4:-80652308 None:intergenic
AAATAATTAACCATGACGGG+AGG 0.694207 1.4:+80652208 None:intergenic
ATTGCACCTTCAAGAATACG+TGG 0.700035 1.4:+80654824 MS.gene99630:CDS
GAAGATGAGAAAGTACCTGG+TGG 0.714138 1.4:+80657230 MS.gene99630:CDS
AACGGTCTTGAGACAGACGA+CGG 0.737114 1.4:+80652664 MS.gene99630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTTATATTTTTAT+AGG + chr1.4:80655774-80655793 MS.gene99630:intron 0.0%
!!! TATATATATATATTTTAATT+CGG - chr1.4:80655536-80655555 None:intergenic 0.0%
!! AACCAAAAAAAAAATTAAAA+GGG - chr1.4:80655142-80655161 None:intergenic 10.0%
!! TAACCAAAAAAAAAATTAAA+AGG - chr1.4:80655143-80655162 None:intergenic 10.0%
!!! AACTTTTTTTTTTTTTTTTG+AGG - chr1.4:80654577-80654596 None:intergenic 10.0%
!!! AATTAGAATTATATTTTTGA+AGG - chr1.4:80652435-80652454 None:intergenic 10.0%
!!! AATTGATTTTACATTTATTT+TGG + chr1.4:80655047-80655066 MS.gene99630:intron 10.0%
!!! ACTTTTTTTTTTTTTTTTGA+GGG - chr1.4:80654576-80654595 None:intergenic 10.0%
!!! CTAAGTAAAAATAATAATTT+TGG + chr1.4:80655576-80655595 MS.gene99630:intron 10.0%
!!! TATAAGTTAAATTTTGTTTT+GGG - chr1.4:80653879-80653898 None:intergenic 10.0%
!!! TATAGATTAGTTAAAAAATA+TGG - chr1.4:80655249-80655268 None:intergenic 10.0%
!!! TTATAAGTTAAATTTTGTTT+TGG - chr1.4:80653880-80653899 None:intergenic 10.0%
!! AAATAATATAAAGATTTCCT+TGG + chr1.4:80654309-80654328 MS.gene99630:intron 15.0%
!! AATAATATAAAGATTTCCTT+GGG + chr1.4:80654310-80654329 MS.gene99630:intron 15.0%
!! ATAAATAAATAAAGGTTTCT+TGG + chr1.4:80654344-80654363 MS.gene99630:intron 15.0%
!! ATAGCAAAATTTGTATTTAT+TGG + chr1.4:80653964-80653983 MS.gene99630:intron 15.0%
!! ATCAATAAAAGGTTATAAAA+AGG - chr1.4:80656493-80656512 None:intergenic 15.0%
!! TCAATAAAAGGTTATAAAAA+GGG - chr1.4:80656492-80656511 None:intergenic 15.0%
!! TTCTATATTAAGAATTTCTT+TGG - chr1.4:80655852-80655871 None:intergenic 15.0%
!!! ATAATTTCACATATTTTACA+TGG + chr1.4:80653209-80653228 MS.gene99630:intron 15.0%
!!! ATTCATAAATTTTATGTAGT+GGG - chr1.4:80653045-80653064 None:intergenic 15.0%
!!! ATTTCACATTTTAAATACAA+TGG + chr1.4:80653173-80653192 MS.gene99630:intron 15.0%
!!! GATATTTATTTTGAAATTGA+AGG - chr1.4:80653082-80653101 None:intergenic 15.0%
!!! TTTATAGTACTATTTTCTTA+TGG + chr1.4:80652490-80652509 MS.gene99630:intron 15.0%
!! ATAATTCAGCTATCAATAAA+AGG - chr1.4:80656504-80656523 None:intergenic 20.0%
!! GGTATAGATATAATAATCTA+AGG + chr1.4:80654207-80654226 MS.gene99630:intron 20.0%
!! TAACAAAACATATCTTATGA+TGG + chr1.4:80652570-80652589 MS.gene99630:intron 20.0%
!! TGACTTATTAGTTCATTAAT+TGG + chr1.4:80654961-80654980 MS.gene99630:intron 20.0%
!! TTATATAAAAGTCTAACACA+GGG + chr1.4:80655070-80655089 MS.gene99630:intron 20.0%
!!! AAGCATATGTGTTATAATTT+TGG - chr1.4:80655808-80655827 None:intergenic 20.0%
!!! AATTACTTTTATCTTACGAT+TGG - chr1.4:80654113-80654132 None:intergenic 20.0%
!!! ACAAAAATTATAGTCACTTT+AGG + chr1.4:80654006-80654025 MS.gene99630:intron 20.0%
!!! GATTCATAAATTTTATGTAG+TGG - chr1.4:80653046-80653065 None:intergenic 20.0%
!!! TAGGTTTTGTAATTTTTATC+AGG + chr1.4:80653399-80653418 MS.gene99630:intron 20.0%
!!! TCTTATTTTAGTCATAACTT+TGG + chr1.4:80654619-80654638 MS.gene99630:intron 20.0%
!!! TGCCCTTTTAATTTTTTTTT+TGG + chr1.4:80655137-80655156 MS.gene99630:intron 20.0%
!!! TGGTTGATTTAATTGTTTTA+AGG + chr1.4:80652599-80652618 MS.gene99630:intron 20.0%
!!! TTGATTTAATTGTTTTAAGG+CGG + chr1.4:80652602-80652621 MS.gene99630:intron 20.0%
!!! TTTACATGGATTTTTAAAGT+TGG + chr1.4:80653223-80653242 MS.gene99630:intron 20.0%
! AAAATCAAATTACACTAACC+TGG - chr1.4:80652946-80652965 None:intergenic 25.0%
! AACGATAGTCTCAATATATT+CGG + chr1.4:80656722-80656741 MS.gene99630:CDS 25.0%
! AAGATTAGTACAAACCATTA+GGG - chr1.4:80656284-80656303 None:intergenic 25.0%
! AGGATGCAATACAATTTATA+AGG - chr1.4:80654935-80654954 None:intergenic 25.0%
! AGTATTACTTAAGGAATCAA+AGG - chr1.4:80654651-80654670 None:intergenic 25.0%
! ATAAAAAAACTAAGATGTCG+TGG + chr1.4:80656447-80656466 MS.gene99630:intron 25.0%
! ATTCACTTCATCATTGTATT+TGG + chr1.4:80652742-80652761 MS.gene99630:CDS 25.0%
! CATTATCATTTCATGCATAA+TGG + chr1.4:80652282-80652301 MS.gene99630:CDS 25.0%
! CTATCATATTATCTATGCTT+AGG - chr1.4:80656320-80656339 None:intergenic 25.0%
! GAACTAATAAGTCAAACAAA+AGG - chr1.4:80654955-80654974 None:intergenic 25.0%
! GTTATATAAAAGTCTAACAC+AGG + chr1.4:80655069-80655088 MS.gene99630:intron 25.0%
! TAAGATTAGTACAAACCATT+AGG - chr1.4:80656285-80656304 None:intergenic 25.0%
! TATCCTAAACTTTCAATCAA+TGG + chr1.4:80654186-80654205 MS.gene99630:intron 25.0%
! TCATTAATGTTGCTCAAATA+TGG + chr1.4:80656560-80656579 MS.gene99630:intron 25.0%
! TGAAAACATTCATAAATCAC+AGG + chr1.4:80653920-80653939 MS.gene99630:intron 25.0%
! TGGATCGAAAAAAAAAAACA+TGG + chr1.4:80653243-80653262 MS.gene99630:intron 25.0%
! TTCAAACCTTAATATGTGTT+TGG + chr1.4:80652404-80652423 MS.gene99630:intron 25.0%
! TTTATAAGGAACTTACTTGT+TGG - chr1.4:80654921-80654940 None:intergenic 25.0%
! TTTGAGCAACATTAATGAAA+AGG - chr1.4:80656558-80656577 None:intergenic 25.0%
!! ATACCATTGATTGAAAGTTT+AGG - chr1.4:80654192-80654211 None:intergenic 25.0%
!! ATGCATGAAATGATAATGAT+AGG - chr1.4:80652280-80652299 None:intergenic 25.0%
!! CTAAGTGTAACAATTTTACA+TGG + chr1.4:80653134-80653153 MS.gene99630:intron 25.0%
!! TACTATTTTCTTATGGAAAG+TGG + chr1.4:80652497-80652516 MS.gene99630:intron 25.0%
!! TATTTTCGCTATTGCAATTA+GGG - chr1.4:80656430-80656449 None:intergenic 25.0%
!! TCACTTTAGGAAAAACAAAA+AGG + chr1.4:80654019-80654038 MS.gene99630:intron 25.0%
!! TTATTTTCGCTATTGCAATT+AGG - chr1.4:80656431-80656450 None:intergenic 25.0%
!!! AATATATTCGGTTGATAAAC+TGG + chr1.4:80656734-80656753 MS.gene99630:CDS 25.0%
!!! ACAATTTTATTGTTTTGTCC+AGG - chr1.4:80655118-80655137 None:intergenic 25.0%
!!! ACCAAAAGGTTTTAAAAGTT+CGG - chr1.4:80654279-80654298 None:intergenic 25.0%
!!! AGTCACTAATATTGTTTTGA+TGG + chr1.4:80654771-80654790 MS.gene99630:intron 25.0%
!!! ATATATTCGGTTGATAAACT+GGG + chr1.4:80656735-80656754 MS.gene99630:CDS 25.0%
!!! ATATCTTATGATGGATGATA+TGG + chr1.4:80652579-80652598 MS.gene99630:intron 25.0%
!!! ATGCTTTGTTATTTCAAGTT+TGG + chr1.4:80657053-80657072 MS.gene99630:CDS 25.0%
!!! TATTTATTTTTTGTGCGACA+TGG - chr1.4:80652990-80653009 None:intergenic 25.0%
!!! TGAAATAACAAAGCATTGAA+AGG - chr1.4:80657049-80657068 None:intergenic 25.0%
!!! TGCTAACTTTTTCATCTAAT+TGG + chr1.4:80653851-80653870 MS.gene99630:intron 25.0%
!!! TTTATTTTTACAAAGTCCCA+AGG - chr1.4:80654329-80654348 None:intergenic 25.0%
AACCTTAATATGTGTTTGGT+CGG + chr1.4:80652408-80652427 MS.gene99630:intron 30.0%
AATAGTGCACATTGCAAAAA+AGG - chr1.4:80655209-80655228 None:intergenic 30.0%
AGAAAAAGAATGATGCATAG+TGG + chr1.4:80654250-80654269 MS.gene99630:intron 30.0%
AGAATACTTTCATGCCAAAA+AGG - chr1.4:80654414-80654433 None:intergenic 30.0%
ATAACAGAATCAAAGGTCAT+TGG + chr1.4:80655990-80656009 MS.gene99630:intron 30.0%
ATAGAGATAGCTACAATGAA+TGG - chr1.4:80654600-80654619 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAA+GGG - chr1.4:80655208-80655227 None:intergenic 30.0%
CATAGATAATATGATAGCCA+AGG + chr1.4:80656323-80656342 MS.gene99630:intron 30.0%
CATCATTAGGAGACAAAAAT+AGG + chr1.4:80653380-80653399 MS.gene99630:intron 30.0%
CTTATGTTTGGTTATGATGT+TGG + chr1.4:80652319-80652338 MS.gene99630:CDS 30.0%
GAAAGAAGTTAGCATTCATT+AGG - chr1.4:80652356-80652375 None:intergenic 30.0%
GCTAAAAATTCGAGAATTGT+GGG + chr1.4:80655692-80655711 MS.gene99630:intron 30.0%
GTAGCATACAGTATTACTTA+AGG - chr1.4:80654660-80654679 None:intergenic 30.0%
TAACAGAATCAAAGGTCATT+GGG + chr1.4:80655991-80656010 MS.gene99630:intron 30.0%
TAACAGTCAAAATTGTGCAT+TGG + chr1.4:80655370-80655389 MS.gene99630:intron 30.0%
TACTCTTACACTAGTGAAAT+TGG - chr1.4:80652529-80652548 None:intergenic 30.0%
TACTGTTGTGTGTATATACT+AGG + chr1.4:80653448-80653467 MS.gene99630:intron 30.0%
TCAAATGTTCTTGTCACAAA+TGG + chr1.4:80656788-80656807 MS.gene99630:CDS 30.0%
TCACACTTTGTGATAACAAT+TGG + chr1.4:80654740-80654759 MS.gene99630:intron 30.0%
TCTTTGCATAACAGAATCAA+AGG + chr1.4:80655983-80656002 MS.gene99630:intron 30.0%
TTGGACTTATGCTAATAGTA+AGG + chr1.4:80653983-80654002 MS.gene99630:intron 30.0%
TTTGTGTCATCTCTTCAATA+GGG - chr1.4:80657157-80657176 None:intergenic 30.0%
! ACGCATACATTTTATATGCT+CGG - chr1.4:80655731-80655750 None:intergenic 30.0%
! TTTTGTGTCATCTCTTCAAT+AGG - chr1.4:80657158-80657177 None:intergenic 30.0%
!! AAGGGACATGTATTTTGAAA+CGG - chr1.4:80655190-80655209 None:intergenic 30.0%
!! ACTAGGAGAAATGTTTTTGA+TGG + chr1.4:80653465-80653484 MS.gene99630:intron 30.0%
!!! AATATTGTTTTGATGGAGAC+AGG + chr1.4:80654778-80654797 MS.gene99630:intron 30.0%
!!! ATAGCCAAGGTTTTAATTCA+TGG + chr1.4:80656336-80656355 MS.gene99630:intron 30.0%
!!! GAACTTTTAAAACCTTTTGG+TGG + chr1.4:80654278-80654297 MS.gene99630:intron 30.0%
!!! TTGTGATAACAATTGGCTTT+TGG + chr1.4:80654747-80654766 MS.gene99630:intron 30.0%
!!! TTTTTTGAGGGAACAATGAA+TGG - chr1.4:80654564-80654583 None:intergenic 30.0%
AAACGGAGGGAGTAATTAAA+AGG - chr1.4:80655173-80655192 None:intergenic 35.0%
AAATGAAATCATGCCCAAAG+TGG - chr1.4:80654476-80654495 None:intergenic 35.0%
AACAGAATCAAAGGTCATTG+GGG + chr1.4:80655992-80656011 MS.gene99630:intron 35.0%
AACGGAGGGAGTAATTAAAA+GGG - chr1.4:80655172-80655191 None:intergenic 35.0%
AACTGGAGCATAGAACATTA+TGG - chr1.4:80656625-80656644 None:intergenic 35.0%
AAGAGATGACACAAAAAGTG+TGG + chr1.4:80657162-80657181 MS.gene99630:CDS 35.0%
ACGTTCAATGAGACTATTTG+GGG - chr1.4:80656092-80656111 None:intergenic 35.0%
ACTGCAAATACGATAACCAA+GGG + chr1.4:80652711-80652730 MS.gene99630:CDS 35.0%
ACTTCATCATTGTATTTGGC+GGG + chr1.4:80652746-80652765 MS.gene99630:CDS 35.0%
AGACAAGATCATTTCTGCTA+GGG - chr1.4:80657262-80657281 None:intergenic 35.0%
AGACTGATTAAGACTTTGTG+TGG - chr1.4:80654373-80654392 None:intergenic 35.0%
AGATCCTTGTGTACATCATT+AGG + chr1.4:80653367-80653386 MS.gene99630:intron 35.0%
ATAAAAGTCTAACACAGGGT+CGG + chr1.4:80655074-80655093 MS.gene99630:intron 35.0%
ATAACCAAACATAAGACCTC+CGG - chr1.4:80652314-80652333 None:intergenic 35.0%
ATACTTTCATGCCAAAAAGG+TGG - chr1.4:80654411-80654430 None:intergenic 35.0%
ATGGTGATAGCAATTGTACT+AGG + chr1.4:80656807-80656826 MS.gene99630:CDS 35.0%
ATTGCATCCGTTAAAATCCA+TGG - chr1.4:80653300-80653319 None:intergenic 35.0%
CACGTTCAATGAGACTATTT+GGG - chr1.4:80656093-80656112 None:intergenic 35.0%
CACTTCATCATTGTATTTGG+CGG + chr1.4:80652745-80652764 MS.gene99630:CDS 35.0%
CAGATATTTCAGCAATTCAC+TGG + chr1.4:80656591-80656610 MS.gene99630:intron 35.0%
CTTGAAGAAGTTCTTTCCAA+CGG + chr1.4:80652646-80652665 MS.gene99630:CDS 35.0%
GACATGGTTAGATAACCTAA+GGG - chr1.4:80652974-80652993 None:intergenic 35.0%
GACTGATTAAGACTTTGTGT+GGG - chr1.4:80654372-80654391 None:intergenic 35.0%
GCAACCATGAATTAAAACCT+TGG - chr1.4:80656343-80656362 None:intergenic 35.0%
GGAAAGAACTTCTTCAAGAA+GGG - chr1.4:80652644-80652663 None:intergenic 35.0%
GGCTAAAAATTCGAGAATTG+TGG + chr1.4:80655691-80655710 MS.gene99630:intron 35.0%
TACTGCAAATACGATAACCA+AGG + chr1.4:80652710-80652729 MS.gene99630:CDS 35.0%
TCTAGTGGAAATATCTCACT+TGG - chr1.4:80656954-80656973 None:intergenic 35.0%
TCTTATACAACTCGAGTACT+AGG + chr1.4:80652791-80652810 MS.gene99630:CDS 35.0%
TGGAAAGAACTTCTTCAAGA+AGG - chr1.4:80652645-80652664 None:intergenic 35.0%
TGTACTAGGAATCAAAGTGA+AGG + chr1.4:80656821-80656840 MS.gene99630:CDS 35.0%
TTTCAGCTTGATATCACTCT+TGG + chr1.4:80654863-80654882 MS.gene99630:CDS 35.0%
! ATAAGGAACTTACTTGTTGG+TGG - chr1.4:80654918-80654937 None:intergenic 35.0%
! ATTTGTTAGTTGCCACCAAA+AGG - chr1.4:80654293-80654312 None:intergenic 35.0%
! CTACAAACGATACACGATTT+TGG + chr1.4:80654676-80654695 MS.gene99630:intron 35.0%
! CTCTACTAACTCTAAGAACT+CGG - chr1.4:80656176-80656195 None:intergenic 35.0%
! GATGTCTCCATGGATTTTAA+CGG + chr1.4:80653290-80653309 MS.gene99630:intron 35.0%
! GGTATCTTCTTTTTCTTCTC+TGG + chr1.4:80657074-80657093 MS.gene99630:CDS 35.0%
! TCTACTAACTCTAAGAACTC+GGG - chr1.4:80656175-80656194 None:intergenic 35.0%
! TCTTCTTTTTCTTCTCTGGT+TGG + chr1.4:80657078-80657097 MS.gene99630:CDS 35.0%
! TTTTTGTGTCAGCATTTGCA+TGG + chr1.4:80656901-80656920 MS.gene99630:CDS 35.0%
!! ATTGAAGATGAGAAAGTACC+TGG + chr1.4:80657227-80657246 MS.gene99630:CDS 35.0%
!! ATTGTATTTGGCGGGTTTAA+CGG + chr1.4:80652754-80652773 MS.gene99630:CDS 35.0%
!! ATTTGATTTTGCTCTCCCTT+AGG + chr1.4:80652956-80652975 MS.gene99630:intron 35.0%
!! CTTGGACATGCATTTTGAAA+CGG + chr1.4:80655411-80655430 MS.gene99630:intron 35.0%
!! TGAAATTGAAGGAGTGTTAG+TGG - chr1.4:80653071-80653090 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG - chr1.4:80655186-80655205 None:intergenic 35.0%
!!! GCCGAACTTTTAAAACCTTT+TGG + chr1.4:80654275-80654294 MS.gene99630:intron 35.0%
!!! TTAATTGTTTTAAGGCGGTG+TGG + chr1.4:80652607-80652626 MS.gene99630:intron 35.0%
!!! TTTTGGTGCCCCTAAAATAA+TGG + chr1.4:80655593-80655612 MS.gene99630:intron 35.0%
AAGAACTTCTTCAAGAAGGG+TGG - chr1.4:80652641-80652660 None:intergenic 40.0%
AAGAGTTTCGTTGTTAGACC+AGG - chr1.4:80655661-80655680 None:intergenic 40.0%
AATGCTCCACGTATTCTTGA+AGG - chr1.4:80654833-80654852 None:intergenic 40.0%
ACGAAACTCTTGCACACTAA+AGG + chr1.4:80655670-80655689 MS.gene99630:intron 40.0%
AGAACCACACGTTCACTAAA+AGG - chr1.4:80654063-80654082 None:intergenic 40.0%
AGAGTTTCGTTGTTAGACCA+GGG - chr1.4:80655660-80655679 None:intergenic 40.0%
AGCATTACTCCTCACTTTAG+GGG + chr1.4:80656048-80656067 MS.gene99630:CDS 40.0%
AGTACAAACCATTAGGGCAA+TGG - chr1.4:80656278-80656297 None:intergenic 40.0%
AGTTGTATAAGACGCGAAGA+AGG - chr1.4:80652783-80652802 None:intergenic 40.0%
ATAGGGACATTCTTTGTCTC+AGG - chr1.4:80657140-80657159 None:intergenic 40.0%
ATGCCAAAAAGGTGGATATG+GGG - chr1.4:80654403-80654422 None:intergenic 40.0%
ATTGCACCTTCAAGAATACG+TGG + chr1.4:80654824-80654843 MS.gene99630:CDS 40.0%
CAGCATTACTCCTCACTTTA+GGG + chr1.4:80656047-80656066 MS.gene99630:CDS 40.0%
CATGCCAAAAAGGTGGATAT+GGG - chr1.4:80654404-80654423 None:intergenic 40.0%
CCAAATAGTCTCATTGAACG+TGG + chr1.4:80656091-80656110 MS.gene99630:CDS 40.0%
CCACGTTCAATGAGACTATT+TGG - chr1.4:80656094-80656113 None:intergenic 40.0%
CCAGTTCTGTTCAACACATT+GGG + chr1.4:80656639-80656658 MS.gene99630:CDS 40.0%
CGACATGGTTAGATAACCTA+AGG - chr1.4:80652975-80652994 None:intergenic 40.0%
CGAGTTCTTAGAGTTAGTAG+AGG + chr1.4:80656174-80656193 MS.gene99630:CDS 40.0%
CTAAAGTGAGGAGTAATGCT+GGG - chr1.4:80656048-80656067 None:intergenic 40.0%
CTTTACTCTGCTGTGATTAC+TGG + chr1.4:80656681-80656700 MS.gene99630:CDS 40.0%
GACAAGATCATTTCTGCTAG+GGG - chr1.4:80657261-80657280 None:intergenic 40.0%
GACCGACCAAACACATATTA+AGG - chr1.4:80652413-80652432 None:intergenic 40.0%
GAGACAAGATCATTTCTGCT+AGG - chr1.4:80657263-80657282 None:intergenic 40.0%
GCAATGGAAATGACAAGTTG+AGG - chr1.4:80656262-80656281 None:intergenic 40.0%
GGTTATGATGTTGGAGTTTC+AGG + chr1.4:80652328-80652347 MS.gene99630:CDS 40.0%
GTCTCCTAATGATGTACACA+AGG - chr1.4:80653374-80653393 None:intergenic 40.0%
TAGGGACATTCTTTGTCTCA+GGG - chr1.4:80657139-80657158 None:intergenic 40.0%
TCATGCCAAAAAGGTGGATA+TGG - chr1.4:80654405-80654424 None:intergenic 40.0%
TCCAGGACACCAAAAATCTT+AGG - chr1.4:80655101-80655120 None:intergenic 40.0%
TCCAGTTCTGTTCAACACAT+TGG + chr1.4:80656638-80656657 MS.gene99630:CDS 40.0%
TGGAATTGGATTTGCAAACC+AGG + chr1.4:80652925-80652944 MS.gene99630:CDS 40.0%
TTATGAGTCATGACACTTGC+TGG + chr1.4:80654447-80654466 MS.gene99630:intron 40.0%
TTTCGCTATTGCAATTAGGG+CGG - chr1.4:80656427-80656446 None:intergenic 40.0%
! AAAAAGTGTGGAAGCAGCAT+TGG + chr1.4:80657174-80657193 MS.gene99630:CDS 40.0%
! ATTCTGAGGAACTCTCGAAA+GGG + chr1.4:80656847-80656866 MS.gene99630:CDS 40.0%
! GCAATCTCTGAAAGGAAAAC+TGG - chr1.4:80654809-80654828 None:intergenic 40.0%
! TGGAAATGACAAGTTGAGGT+CGG - chr1.4:80656258-80656277 None:intergenic 40.0%
! TGTCATTTCCATTGCCCTAA+TGG + chr1.4:80656267-80656286 MS.gene99630:CDS 40.0%
! TTGAAGGTGCAATCTCTGAA+AGG - chr1.4:80654817-80654836 None:intergenic 40.0%
!!! GACATGCATTTTGAAACGGA+GGG + chr1.4:80655415-80655434 MS.gene99630:intron 40.0%
!!! GGACATGTATTTTGAAACGG+AGG - chr1.4:80655187-80655206 None:intergenic 40.0%
!!! TCCTAAGATTTTTGGTGTCC+TGG + chr1.4:80655097-80655116 MS.gene99630:intron 40.0%
AACCTTCTCATGCTCATCGT+TGG + chr1.4:80652884-80652903 MS.gene99630:CDS 45.0%
AAGTGAATAGCTGCAACCCT+TGG - chr1.4:80652730-80652749 None:intergenic 45.0%
AGGGTCTGCAATTGCAATTG+TGG - chr1.4:80656473-80656492 None:intergenic 45.0%
CAAAGTGAAGGACCATTCTG+AGG + chr1.4:80656833-80656852 MS.gene99630:CDS 45.0%
CAACTCGAGTACTAGGAAGA+AGG + chr1.4:80652798-80652817 MS.gene99630:CDS 45.0%
CATTCTTTGTCTCAGGGACA+AGG - chr1.4:80657133-80657152 None:intergenic 45.0%
CCAGCATTACTCCTCACTTT+AGG + chr1.4:80656046-80656065 MS.gene99630:CDS 45.0%
CCCAATGTGTTGAACAGAAC+TGG - chr1.4:80656642-80656661 None:intergenic 45.0%
CCCTAAAATAATGGTGCCCT+GGG + chr1.4:80655602-80655621 MS.gene99630:intron 45.0%
CCTAAAGTGAGGAGTAATGC+TGG - chr1.4:80656049-80656068 None:intergenic 45.0%
CGAAAGCTATTACTCGAAGC+TGG + chr1.4:80656762-80656781 MS.gene99630:CDS 45.0%
CGCTTGAGGAGATTTCTGAA+CGG - chr1.4:80656229-80656248 None:intergenic 45.0%
CTTGGAATAAGCCAAGCAAG+TGG - chr1.4:80656936-80656955 None:intergenic 45.0%
CTTTCGAGAGTTCCTCAGAA+TGG - chr1.4:80656848-80656867 None:intergenic 45.0%
GAATCAAAGGTCATTGGGGT+TGG + chr1.4:80655996-80656015 MS.gene99630:intron 45.0%
GAGTTTCGTTGTTAGACCAG+GGG - chr1.4:80655659-80655678 None:intergenic 45.0%
GTACTATTGCGATGTCTCCA+TGG + chr1.4:80653280-80653299 MS.gene99630:intron 45.0%
GTCAGCATTTGCATGGTCAT+GGG + chr1.4:80656908-80656927 MS.gene99630:CDS 45.0%
GTCTTACTTGGCTGTGGAAT+TGG + chr1.4:80652911-80652930 MS.gene99630:CDS 45.0%
TACCAACGATGAGCATGAGA+AGG - chr1.4:80652889-80652908 None:intergenic 45.0%
TCAGCATTTGCATGGTCATG+GGG + chr1.4:80656909-80656928 MS.gene99630:CDS 45.0%
TCTCATGCTCATCGTTGGTA+GGG + chr1.4:80652889-80652908 MS.gene99630:CDS 45.0%
TCTCATTGAACGTGGTCACT+TGG + chr1.4:80656099-80656118 MS.gene99630:CDS 45.0%
TCTGAGAAAGATTCGTGGCA+CGG + chr1.4:80656138-80656157 MS.gene99630:CDS 45.0%
TGCAGCTCTTGTAGTTGTGA+TGG + chr1.4:80656872-80656891 MS.gene99630:CDS 45.0%
TGTCAGCATTTGCATGGTCA+TGG + chr1.4:80656907-80656926 MS.gene99630:CDS 45.0%
TTCTCATGCTCATCGTTGGT+AGG + chr1.4:80652888-80652907 MS.gene99630:CDS 45.0%
! AGGGTCGGTCCTAAGATTTT+TGG + chr1.4:80655089-80655108 MS.gene99630:intron 45.0%
! ATCGTTGGTAGGGTCTTACT+TGG + chr1.4:80652899-80652918 MS.gene99630:CDS 45.0%
! CAACCCCATATCCACCTTTT+TGG + chr1.4:80654397-80654416 MS.gene99630:intron 45.0%
! CATTCTGAGGAACTCTCGAA+AGG + chr1.4:80656846-80656865 MS.gene99630:CDS 45.0%
! CTCACCTTTTAGTGAACGTG+TGG + chr1.4:80654056-80654075 MS.gene99630:intron 45.0%
! CTCTGAAAGGAAAACTGGCA+CGG - chr1.4:80654804-80654823 None:intergenic 45.0%
!! CCCAGGGCACCATTATTTTA+GGG - chr1.4:80655605-80655624 None:intergenic 45.0%
!! GAAGATGAGAAAGTACCTGG+TGG + chr1.4:80657230-80657249 MS.gene99630:CDS 45.0%
!! GCTGTTCTGAGAAAGATTCG+TGG + chr1.4:80656133-80656152 MS.gene99630:CDS 45.0%
!! TGGAGGATATCTCTGGGATT+GGG + chr1.4:80656016-80656035 MS.gene99630:CDS 45.0%
!! TGTTGGTGGCATAGTTGACA+AGG - chr1.4:80654904-80654923 None:intergenic 45.0%
!! TTGGAGGATATCTCTGGGAT+TGG + chr1.4:80656015-80656034 MS.gene99630:CDS 45.0%
!!! AGCAGCATTGGTTTTGGAAG+AGG + chr1.4:80657186-80657205 MS.gene99630:CDS 45.0%
!!! CCAGGGCACCATTATTTTAG+GGG - chr1.4:80655604-80655623 None:intergenic 45.0%
!!! GGACATGCATTTTGAAACGG+AGG + chr1.4:80655414-80655433 MS.gene99630:intron 45.0%
!!! TGTGGAAGCAGCATTGGTTT+TGG + chr1.4:80657180-80657199 MS.gene99630:CDS 45.0%
!! TTGTAAAAATAAATAAATAA+AGG + chr1.4:80654336-80654355 MS.gene99630:intron 5.0%
AACGGTCTTGAGACAGACGA+CGG + chr1.4:80652664-80652683 MS.gene99630:CDS 50.0%
ACCAAACATAAGACCTCCGG+TGG - chr1.4:80652311-80652330 None:intergenic 50.0%
AGACAGACGACGGAATCAGA+TGG + chr1.4:80652674-80652693 MS.gene99630:CDS 50.0%
AGGCTCACAATGTTGATCGC+TGG + chr1.4:80652818-80652837 MS.gene99630:CDS 50.0%
CACTAGAGACTCGTTCTGCA+GGG + chr1.4:80656967-80656986 MS.gene99630:CDS 50.0%
CATGTGTGACGTGCTTGACT+TGG + chr1.4:80655393-80655412 MS.gene99630:intron 50.0%
CCCCTAAAATAATGGTGCCC+TGG + chr1.4:80655601-80655620 MS.gene99630:intron 50.0%
CGGCAACGACAGAGAATTTG+AGG + chr1.4:80652243-80652262 MS.gene99630:CDS 50.0%
GAACGTGGTCACTTGGACAA+AGG + chr1.4:80656106-80656125 MS.gene99630:CDS 50.0%
GACAGACGACGGAATCAGAT+GGG + chr1.4:80652675-80652694 MS.gene99630:CDS 50.0%
GTGCAATGACAGCAGTGAAG+AGG - chr1.4:80657019-80657038 None:intergenic 50.0%
TCAAAGGTCATTGGGGTTGG+AGG + chr1.4:80655999-80656018 MS.gene99630:CDS 50.0%
TCATGCATAATGGCTGCCAC+CGG + chr1.4:80652292-80652311 MS.gene99630:CDS 50.0%
TGGGGTTGGAGGATATCTCT+GGG + chr1.4:80656010-80656029 MS.gene99630:CDS 50.0%
TTGGGGTTGGAGGATATCTC+TGG + chr1.4:80656009-80656028 MS.gene99630:CDS 50.0%
TTTCGTTGTTAGACCAGGGG+TGG - chr1.4:80655656-80655675 None:intergenic 50.0%
! ACACTTGCTGGTGACCACTT+TGG + chr1.4:80654459-80654478 MS.gene99630:intron 50.0%
! CACTTGCTGGTGACCACTTT+GGG + chr1.4:80654460-80654479 MS.gene99630:intron 50.0%
! GCTGGCTTCTTCTTCATAGC+TGG + chr1.4:80652836-80652855 MS.gene99630:CDS 50.0%
! GGCAAGTCGTGTTGCTAAAG+AGG + chr1.4:80656195-80656214 MS.gene99630:CDS 50.0%
! TTTAGGGGCTTGCTTGGTAG+TGG + chr1.4:80656063-80656082 MS.gene99630:CDS 50.0%
!! AGGATATCTCTGGGATTGGG+AGG + chr1.4:80656019-80656038 MS.gene99630:CDS 50.0%
!! GCCCAGGGCACCATTATTTT+AGG - chr1.4:80655606-80655625 None:intergenic 50.0%
CCAAGCAAGCCCCTAAAGTG+AGG - chr1.4:80656060-80656079 None:intergenic 55.0%
CCACTAGAGACTCGTTCTGC+AGG + chr1.4:80656966-80656985 MS.gene99630:CDS 55.0%
CCTGCAGAACGAGTCTCTAG+TGG - chr1.4:80656969-80656988 None:intergenic 55.0%
CTGCTAGGGGAATTTCCACC+AGG - chr1.4:80657248-80657267 None:intergenic 55.0%
GAGGTCGGTTATTGCGCTTG+AGG - chr1.4:80656243-80656262 None:intergenic 55.0%
GGTAGGGTCTTACTTGGCTG+TGG + chr1.4:80652905-80652924 MS.gene99630:CDS 55.0%
GTCGTCTGTCTCAAGACCGT+TGG - chr1.4:80652665-80652684 None:intergenic 55.0%
! CCTCACTTTAGGGGCTTGCT+TGG + chr1.4:80656057-80656076 MS.gene99630:CDS 55.0%
! GCCACCGGAGGTCTTATGTT+TGG + chr1.4:80652307-80652326 MS.gene99630:CDS 55.0%
GGTCATGGGGTCCACTTGCT+TGG + chr1.4:80656922-80656941 MS.gene99630:CDS 60.0%
TGCATAATGGCTGCCACCGG+AGG + chr1.4:80652295-80652314 MS.gene99630:CDS 60.0%
! ATGACGGGAGGAGGCTTCAG+CGG + chr1.4:80652220-80652239 MS.gene99630:CDS 60.0%
TAGACCAGGGGTGGCCCTGA+GGG - chr1.4:80655647-80655666 None:intergenic 65.0%
TTAGACCAGGGGTGGCCCTG+AGG - chr1.4:80655648-80655667 None:intergenic 65.0%
ACGGGAGGAGGCTTCAGCGG+CGG + chr1.4:80652223-80652242 MS.gene99630:CDS 70.0%
CTGAGGGTGGACGGAAGGGG+CGG - chr1.4:80655631-80655650 None:intergenic 70.0%
GCCCCTTCCGTCCACCCTCA+GGG + chr1.4:80655630-80655649 MS.gene99630:intron 70.0%
GCCCTGAGGGTGGACGGAAG+GGG - chr1.4:80655634-80655653 None:intergenic 70.0%
GGCCCTGAGGGTGGACGGAA+GGG - chr1.4:80655635-80655654 None:intergenic 70.0%
TGGCCCTGAGGGTGGACGGA+AGG - chr1.4:80655636-80655655 None:intergenic 70.0%
ACCAGGGGTGGCCCTGAGGG+TGG - chr1.4:80655644-80655663 None:intergenic 75.0%
ACGGAAGGGGCGGCAGCCCA+GGG - chr1.4:80655621-80655640 None:intergenic 75.0%
CGCCCCTTCCGTCCACCCTC+AGG + chr1.4:80655629-80655648 MS.gene99630:intron 75.0%
GGGGTGGCCCTGAGGGTGGA+CGG - chr1.4:80655640-80655659 None:intergenic 75.0%
TCCACCCTCAGGGCCACCCC+TGG + chr1.4:80655640-80655659 MS.gene99630:intron 75.0%
! GACGGAAGGGGCGGCAGCCC+AGG - chr1.4:80655622-80655641 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 80652220 80657292 80652220 ID=MS.gene99630
chr1.4 mRNA 80652220 80657292 80652220 ID=MS.gene99630.t1;Parent=MS.gene99630
chr1.4 exon 80652220 80652349 80652220 ID=MS.gene99630.t1.exon1;Parent=MS.gene99630.t1
chr1.4 CDS 80652220 80652349 80652220 ID=cds.MS.gene99630.t1;Parent=MS.gene99630.t1
chr1.4 exon 80652621 80652946 80652621 ID=MS.gene99630.t1.exon2;Parent=MS.gene99630.t1
chr1.4 CDS 80652621 80652946 80652621 ID=cds.MS.gene99630.t1;Parent=MS.gene99630.t1
chr1.4 exon 80654800 80654924 80654800 ID=MS.gene99630.t1.exon3;Parent=MS.gene99630.t1
chr1.4 CDS 80654800 80654924 80654800 ID=cds.MS.gene99630.t1;Parent=MS.gene99630.t1
chr1.4 exon 80655997 80656288 80655997 ID=MS.gene99630.t1.exon4;Parent=MS.gene99630.t1
chr1.4 CDS 80655997 80656288 80655997 ID=cds.MS.gene99630.t1;Parent=MS.gene99630.t1
chr1.4 exon 80656594 80657292 80656594 ID=MS.gene99630.t1.exon5;Parent=MS.gene99630.t1
chr1.4 CDS 80656594 80657292 80656594 ID=cds.MS.gene99630.t1;Parent=MS.gene99630.t1
Gene Sequence

>MS.gene99630

ATGACGGGAGGAGGCTTCAGCGGCGGCAACGACAGAGAATTTGAGGCAAAGATAACTCCTATCATTATCATTTCATGCATAATGGCTGCCACCGGAGGTCTTATGTTTGGTTATGATGTTGGAGTTTCAGGTACCTAATGAATGCTAACTTCTTTCATACAATATCTTTGAGCTTAAAATTCGCTTCAAACCTTAATATGTGTTTGGTCGGTCCTTCAAAAATATAATTCTAATTAATTCAAATATCATATTTTATGATAAAATTTAAAATTTATAGTACTATTTTCTTATGGAAAGTGGATTACTCCAATTTCACTAGTGTAAGAGTAGTATAAAAATCTGAGCATTGCTAACAAAACATATCTTATGATGGATGATATGGTTGATTTAATTGTTTTAAGGCGGTGTGGCATCGATGCCACCCTTCTTGAAGAAGTTCTTTCCAACGGTCTTGAGACAGACGACGGAATCAGATGGGTCAGAAAGCAACTACTGCAAATACGATAACCAAGGGTTGCAGCTATTCACTTCATCATTGTATTTGGCGGGTTTAACGGTAACCTTCTTCGCGTCTTATACAACTCGAGTACTAGGAAGAAGGCTCACAATGTTGATCGCTGGCTTCTTCTTCATAGCTGGAGTTACTCTTAATGCATCTGCTCAAAACCTTCTCATGCTCATCGTTGGTAGGGTCTTACTTGGCTGTGGAATTGGATTTGCAAACCAGGTTAGTGTAATTTGATTTTGCTCTCCCTTAGGTTATCTAACCATGTCGCACAAAAAATAAATAAATTATTAGTATTGTATAGTCTACTTGTTTATCCCACTACATAAAATTTATGAATCTACCACTAACACTCCTTCAATTTCAAAATAAATATCGTTTAAGATTTTTACATAATTAAGAAAAATGACTAAGTGTAACAATTTTACATGGATTTTAAATATGTGAAATTTCACATTTTAAATACAATGGATTTTAAATATGCATAATTTCACATATTTTACATGGATTTTTAAAGTTGGATCGAAAAAAAAAAACATGGATTTTTAAAGTATAGTACTATTGCGATGTCTCCATGGATTTTAACGGATGCAATTCAATGTACTATCGTTGTTTGAGTTCGAAACTTGTTTAAGTCATGTGAGATCCTTGTGTACATCATTAGGAGACAAAAATAGGTTTTGTAATTTTTATCAGGTGCTTGTATATTTGTTTGATAAACAGTACTGTTGTGTGTATATACTAGGAGAAATGTTTTTGATGGCACATATTTAAGAATTTAATTAGTATACTTTATTAGTGTAGAAGTCTTTTACACATGCATTCAATGATACGTTATGCGTCAATTAATGACTATAAAAACACGAGTTGTTATATTCATTAATTTATGTGACAACATCATTAATCATAGATTTAATTTAATTATTTTGCAACGAGTACAATCACTTTAGAGATGTCAAATCTTATTTTATAAATGACATTTTTTAACTATTAAATTAATTTTGAGATATTTAAAAAACGAACTCTTTTTGTAAAAAATTCGAACAAATTTTTTATTTTCACATTTCGATTATTTTATTAATTAAATTAATATGAATGTATCTATTAATTAAATCAATCATCTCTTTGCTAACTTTTTCATCTAATTGGCTCCCAAAACAAAATTTAACTTATAATTTTACTTTAATTCTATATATGAAAACATTCATAAATCACAGGAGAGATATTTTTCAAGAATTAATAGCAAAATTTGTATTTATTGGACTTATGCTAATAGTAAGGACAAAAATTATAGTCACTTTAGGAAAAACAAAAAGGAACAAAAATTCAAACTCACCTTTTAGTGAACGTGTGGTTCTTGTATGAACACATCTTTACAGACACAGCCAATCGTAAGATAAAAGTAATTGTAAGATAACATCAACAAAATTATATCATTTTTTTTATATAGTTATTATATTATATCCTAAACTTTCAATCAATGGTATAGATATAATAATCTAAGGAATTTTATTCAACAAAAAAAAGAAAAAGAATGATGCATAGTGGAAGCCGAACTTTTAAAACCTTTTGGTGGCAACTAACAAATAATATAAAGATTTCCTTGGGACTTTGTAAAAATAAATAAATAAAGGTTTCTTGGCACCCACACAAAGTCTTAATCAGTCTTTCTCAACCCCATATCCACCTTTTTGGCATGAAAGTATTCTTACTATTTGACGTTTATGAGTCATGACACTTGCTGGTGACCACTTTGGGCATGATTTCATTTAATTAAGAGAAAAATGATATAATATGTTTAATTAATGAATGATTAAAATATCTTGTTGACAAGTTCCATTCATTGTTCCCTCAAAAAAAAAAAAAAAAGTTCCATTCATTGTAGCTATCTCTATCTTATTTTAGTCATAACTTTGGACTTTGCCTTTGATTCCTTAAGTAATACTGTATGCTACAAACGATACACGATTTTGGTCATATTCAATTAATCAAATATTTAATTAATAATTTAAAGTTCACACTTTGTGATAACAATTGGCTTTTGGAAGTCACTAATATTGTTTTGATGGAGACAGGCCGTGCCAGTTTTCCTTTCAGAGATTGCACCTTCAAGAATACGTGGAGCATTGAATATTTTGTTTCAGCTTGATATCACTCTTGGCATTCTATTTGCTAACCTTGTCAACTATGCCACCAACAAGTAAGTTCCTTATAAATTGTATTGCATCCTTTTGTTTGACTTATTAGTTCATTAATTGGAAATTATTGTGTTAAAAACTTGAAAAATTTATAAGAACAATCAATGATAGTAGAAGCTCAATTAATTGATTTTACATTTATTTTGGTTATATAAAAGTCTAACACAGGGTCGGTCCTAAGATTTTTGGTGTCCTGGACAAAACAATAAAATTGTGCCCTTTTAATTTTTTTTTTGGTTACATGTGCCCTTTTAATTACTCCCTCCGTTTCAAAATACATGTCCCTTTTTTGCAATGTGCACTATTCACTTGACTTACTTTGACCATATTTTTTAACTAATCTATAAATACAAATATTAGCATGTAAGATGTTGTTTGATTTGTCTCGACAAATATTTTCAAAATATTAAATTTTTATAATTTTTTAGTTTAGATAATTAAAGATATTAACAGTCAAAATTGTGCATTGGCATGTGTGACGTGCTTGACTTGGACATGCATTTTGAAACGGAGGGAGTATTTCAATAGTTACTTCTTACATTTTTTGTTGCAAACGATTCATTTATAATCAAAGTTTTCTAAAAATATATTCTCAATATAATTAATTAAACCGAATTAAAATATATATATATATATATATATAGTACTAACTACTAAGTAAAAATAATAATTTTGGTGCCCCTAAAATAATGGTGCCCTGGGCTGCCGCCCCTTCCGTCCACCCTCAGGGCCACCCCTGGTCTAACAACGAAACTCTTGCACACTAAAGGCTAAAAATTCGAGAATTGTGGGTTTGAGCTCGCATCCGAGCATATAAAATGTATGCGTAGCTCTTTACGTATTTATGAGACATTTTATTTTATATTTTTATAGGTGAAAGCACCAAAATTATAACACATATGCTTGACTATTTAGTGTTTTGTGAGCCAAAGAAATTCTTAATATAGAATTTAATGATAATGCTACATATTTGACTTTAATGAAAAGTCATGTCAATTTACTCTAGACAAATAGTTATGAATATTGTACAATTCATGTTACTGATGCTGCTTATTATATATCTTTGCATAACAGAATCAAAGGTCATTGGGGTTGGAGGATATCTCTGGGATTGGGAGGTATCCCAGCATTACTCCTCACTTTAGGGGCTTGCTTGGTAGTGGACACCCCAAATAGTCTCATTGAACGTGGTCACTTGGACAAAGGAAAAGCTGTTCTGAGAAAGATTCGTGGCACGGACAACATTGAACCCGAGTTCTTAGAGTTAGTAGAGGCAAGTCGTGTTGCTAAAGAGGTGAAACATCCGTTCAGAAATCTCCTCAAGCGCAATAACCGACCTCAACTTGTCATTTCCATTGCCCTAATGGTTTGTACTAATCTTATGTTCACATTTTCCTAAGCATAGATAATATGATAGCCAAGGTTTTAATTCATGGTTGCAATCGCTTAACAATTCTTGTTTTTGTAGAGAATTGTAGTCAAATACGTTTAAAAGTTAAAACCGCCCTAATTGCAATAGCGAAAATAAAAAAACTAAGATGTCGTGGCCACAATTGCAATTGCAGACCCTTTTTATAACCTTTTATTGATAGCTGAATTATATAAGCTTATTATAAAGTTATAGTCATTGCTCCTTTTCATTAATGTTGCTCAAATATGGTGATAAAACAGATATTTCAGCAATTCACTGGCATCAATGCCATAATGTTCTATGCTCCAGTTCTGTTCAACACATTGGGATTCAAGAATGATGCTGCACTTTACTCTGCTGTGATTACTGGTGCTATCAATGTCGTCTCAACGATAGTCTCAATATATTCGGTTGATAAACTGGGACGTCGAAAGCTATTACTCGAAGCTGGTGTTCAAATGTTCTTGTCACAAATGGTGATAGCAATTGTACTAGGAATCAAAGTGAAGGACCATTCTGAGGAACTCTCGAAAGGGTATGCAGCTCTTGTAGTTGTGATGGTGTGTATTTTTGTGTCAGCATTTGCATGGTCATGGGGTCCACTTGCTTGGCTTATTCCAAGTGAGATATTTCCACTAGAGACTCGTTCTGCAGGGCAAAGTGTAACAGTTTGTGTCAACTTCCTCTTCACTGCTGTCATTGCACAAGCTTTCCTTTCAATGCTTTGTTATTTCAAGTTTGGTATCTTCTTTTTCTTCTCTGGTTGGATCTTGTTCATGTCAACTTTTGTCTTTTTCCTTGTCCCTGAGACAAAGAATGTCCCTATTGAAGAGATGACACAAAAAGTGTGGAAGCAGCATTGGTTTTGGAAGAGGTTTGTTGAAAATGATTATATTGAAGATGAGAAAGTACCTGGTGGAAATTCCCCTAGCAGAAATGATCTTGTCTCTCAGTTGTAA
Protein sequence

>MS.gene99630.t1

MTGGGFSGGNDREFEAKITPIIIISCIMAATGGLMFGYDVGVSGGVASMPPFLKKFFPTVLRQTTESDGSESNYCKYDNQGLQLFTSSLYLAGLTVTFFASYTTRVLGRRLTMLIAGFFFIAGVTLNASAQNLLMLIVGRVLLGCGIGFANQAVPVFLSEIAPSRIRGALNILFQLDITLGILFANLVNYATNKIKGHWGWRISLGLGGIPALLLTLGACLVVDTPNSLIERGHLDKGKAVLRKIRGTDNIEPEFLELVEASRVAKEVKHPFRNLLKRNNRPQLVISIALMIFQQFTGINAIMFYAPVLFNTLGFKNDAALYSAVITGAINVVSTIVSIYSVDKLGRRKLLLEAGVQMFLSQMVIAIVLGIKVKDHSEELSKGYAALVVVMVCIFVSAFAWSWGPLAWLIPSEIFPLETRSAGQSVTVCVNFLFTAVIAQAFLSMLCYFKFGIFFFFSGWILFMSTFVFFLVPETKNVPIEEMTQKVWKQHWFWKRFVENDYIEDEKVPGGNSPSRNDLVSQL