Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048151.01.T01 | XP_039685632.1 | 74.398 | 457 | 101 | 5 | 1 | 442 | 69 | 524 | 0 | 675 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048151.01.T01 | G7IFA0 | 78.855 | 227 | 27 | 3 | 1 | 206 | 50 | 276 | 1.55e-117 | 355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048151.01 | MsG0180002518.01 | 0.818203 | 2.215527e-52 | 1.647686e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048151.01.T01 | MTR_2g010270 | 78.855 | 227 | 27 | 3 | 1 | 206 | 50 | 276 | 3.94e-121 | 355 |
| MsG0080048151.01.T01 | MTR_8g446640 | 81.193 | 218 | 29 | 3 | 1 | 206 | 50 | 267 | 1.03e-120 | 354 |
| MsG0080048151.01.T01 | MTR_7g024060 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_6g087820 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_5g081190 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_5g091480 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_5g056290 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_3g031190 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_2g005490 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_2g010570 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.24e-120 | 355 |
| MsG0080048151.01.T01 | MTR_5g030110 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.33e-120 | 354 |
| MsG0080048151.01.T01 | MTR_2g007410 | 81.193 | 218 | 29 | 3 | 1 | 206 | 69 | 286 | 1.33e-120 | 354 |
| MsG0080048151.01.T01 | MTR_7g451880 | 80.275 | 218 | 31 | 3 | 1 | 206 | 70 | 287 | 4.65e-119 | 350 |
| MsG0080048151.01.T01 | MTR_4g058660 | 79.817 | 218 | 32 | 3 | 1 | 206 | 69 | 286 | 6.19e-118 | 348 |
| MsG0080048151.01.T01 | MTR_7g074180 | 78.899 | 218 | 34 | 2 | 1 | 206 | 69 | 286 | 6.34e-117 | 345 |
| MsG0080048151.01.T01 | MTR_1g105785 | 38.829 | 461 | 260 | 6 | 2 | 440 | 70 | 530 | 1.67e-111 | 340 |
| MsG0080048151.01.T01 | MTR_1g011490 | 76.606 | 218 | 30 | 3 | 1 | 206 | 69 | 277 | 4.58e-111 | 330 |
| MsG0080048151.01.T01 | MTR_1g023370 | 75.587 | 213 | 31 | 4 | 1 | 206 | 69 | 267 | 4.84e-107 | 319 |
| MsG0080048151.01.T01 | MTR_7g110100 | 39.651 | 459 | 249 | 9 | 1 | 435 | 69 | 523 | 3.24e-105 | 322 |
| MsG0080048151.01.T01 | MTR_5g045850 | 76.214 | 206 | 43 | 2 | 1 | 206 | 54 | 253 | 3.71e-105 | 314 |
| MsG0080048151.01.T01 | MTR_3g015660 | 91.837 | 147 | 12 | 0 | 1 | 147 | 69 | 215 | 5.81e-96 | 288 |
| MsG0080048151.01.T01 | MTR_7g051400 | 36.486 | 444 | 256 | 6 | 2 | 432 | 70 | 500 | 4.78e-94 | 294 |
| MsG0080048151.01.T01 | MTR_8g005940 | 71.359 | 206 | 38 | 2 | 1 | 206 | 69 | 253 | 3.68e-92 | 281 |
| MsG0080048151.01.T01 | MTR_3g036220 | 68.447 | 206 | 16 | 2 | 1 | 206 | 54 | 210 | 3.53e-88 | 269 |
| MsG0080048151.01.T01 | MTR_1g082860 | 84.932 | 146 | 13 | 1 | 1 | 146 | 69 | 205 | 5.89e-85 | 261 |
| MsG0080048151.01.T01 | MTR_5g012180 | 64.115 | 209 | 34 | 4 | 1 | 206 | 54 | 224 | 1.23e-80 | 250 |
| MsG0080048151.01.T01 | MTR_0105s0080 | 89.831 | 118 | 12 | 0 | 28 | 145 | 52 | 169 | 8.18e-71 | 224 |
| MsG0080048151.01.T01 | MTR_3g449160 | 71.329 | 143 | 11 | 1 | 1 | 143 | 1 | 113 | 1.01e-64 | 204 |
| MsG0080048151.01.T01 | MTR_2g435900 | 72.028 | 143 | 10 | 1 | 1 | 143 | 1 | 113 | 3.37e-64 | 202 |
| MsG0080048151.01.T01 | MTR_0048s0080 | 34.853 | 373 | 184 | 8 | 71 | 429 | 5 | 332 | 7.19e-60 | 199 |
| MsG0080048151.01.T01 | MTR_3g452170 | 38.007 | 271 | 156 | 5 | 1 | 259 | 69 | 339 | 2.15e-57 | 196 |
| MsG0080048151.01.T01 | MTR_4g032565 | 39.493 | 276 | 141 | 7 | 185 | 435 | 9 | 283 | 1.33e-56 | 189 |
| MsG0080048151.01.T01 | MTR_7g045450 | 47.475 | 198 | 91 | 2 | 1 | 193 | 69 | 258 | 9.64e-56 | 186 |
| MsG0080048151.01.T01 | MTR_6g073570 | 47.475 | 198 | 91 | 2 | 1 | 193 | 69 | 258 | 9.64e-56 | 186 |
| MsG0080048151.01.T01 | MTR_4g032585 | 39.493 | 276 | 141 | 8 | 185 | 435 | 9 | 283 | 1.83e-55 | 186 |
| MsG0080048151.01.T01 | MTR_5g071020 | 50.971 | 206 | 31 | 4 | 1 | 206 | 54 | 189 | 2.06e-50 | 171 |
| MsG0080048151.01.T01 | MTR_5g019960 | 53.061 | 147 | 67 | 2 | 2 | 147 | 76 | 221 | 1.65e-49 | 169 |
| MsG0080048151.01.T01 | MTR_4g060433 | 40.154 | 259 | 99 | 3 | 177 | 435 | 1 | 203 | 1.69e-49 | 167 |
| MsG0080048151.01.T01 | MTR_1g492690 | 33.127 | 323 | 189 | 8 | 126 | 439 | 8 | 312 | 3.69e-43 | 155 |
| MsG0080048151.01.T01 | MTR_1g052715 | 36.406 | 217 | 125 | 3 | 3 | 206 | 30 | 246 | 2.01e-40 | 147 |
| MsG0080048151.01.T01 | MTR_3g007260 | 47.945 | 146 | 50 | 2 | 2 | 147 | 55 | 174 | 5.87e-40 | 141 |
| MsG0080048151.01.T01 | MTR_1g110330 | 85.135 | 74 | 11 | 0 | 1 | 74 | 47 | 120 | 2.23e-39 | 141 |
| MsG0080048151.01.T01 | MTR_8g104590 | 60.748 | 107 | 39 | 1 | 194 | 300 | 7 | 110 | 1.05e-38 | 139 |
| MsG0080048151.01.T01 | MTR_2g019040 | 56.818 | 132 | 43 | 3 | 84 | 206 | 4 | 130 | 2.26e-37 | 137 |
| MsG0080048151.01.T01 | MTR_1g115520 | 47.742 | 155 | 50 | 2 | 207 | 361 | 5 | 128 | 1.51e-36 | 131 |
| MsG0080048151.01.T01 | MTR_5g057125 | 34.657 | 277 | 162 | 6 | 163 | 438 | 40 | 298 | 3.50e-33 | 127 |
| MsG0080048151.01.T01 | MTR_2g048560 | 24.495 | 396 | 273 | 10 | 2 | 374 | 70 | 462 | 1.02e-29 | 121 |
| MsG0080048151.01.T01 | MTR_8g064300 | 37.056 | 197 | 108 | 6 | 251 | 435 | 116 | 308 | 1.50e-29 | 117 |
| MsG0080048151.01.T01 | MTR_4g036240 | 26.776 | 366 | 246 | 10 | 2 | 350 | 70 | 430 | 4.86e-28 | 117 |
| MsG0080048151.01.T01 | MTR_3g056270 | 26.776 | 366 | 246 | 10 | 2 | 350 | 229 | 589 | 1.18e-27 | 116 |
| MsG0080048151.01.T01 | MTR_2g450060 | 25.287 | 348 | 223 | 10 | 1 | 318 | 69 | 409 | 3.79e-27 | 114 |
| MsG0080048151.01.T01 | MTR_7g096440 | 30.488 | 164 | 114 | 0 | 2 | 165 | 23 | 186 | 1.66e-26 | 108 |
| MsG0080048151.01.T01 | MTR_3g068135 | 53.465 | 101 | 38 | 1 | 163 | 263 | 39 | 130 | 1.73e-26 | 106 |
| MsG0080048151.01.T01 | MTR_5g093790 | 36.842 | 190 | 104 | 7 | 258 | 435 | 197 | 382 | 2.68e-25 | 107 |
| MsG0080048151.01.T01 | MTR_4g036240 | 26.346 | 353 | 238 | 10 | 15 | 350 | 3 | 350 | 6.64e-25 | 107 |
| MsG0080048151.01.T01 | MTR_7g039300 | 33.333 | 198 | 77 | 4 | 1 | 193 | 100 | 247 | 9.36e-25 | 102 |
| MsG0080048151.01.T01 | MTR_6g465570 | 46.602 | 103 | 55 | 0 | 2 | 104 | 66 | 168 | 5.80e-24 | 98.6 |
| MsG0080048151.01.T01 | MTR_5g078250 | 25.137 | 366 | 249 | 10 | 2 | 348 | 70 | 429 | 4.11e-23 | 102 |
| MsG0080048151.01.T01 | MTR_8g465040 | 45.631 | 103 | 56 | 0 | 1 | 103 | 69 | 171 | 1.00e-22 | 95.1 |
| MsG0080048151.01.T01 | MTR_6g024030 | 57.333 | 75 | 32 | 0 | 72 | 146 | 60 | 134 | 1.62e-22 | 96.3 |
| MsG0080048151.01.T01 | MTR_8g062030 | 24.798 | 371 | 252 | 13 | 2 | 351 | 70 | 434 | 5.88e-22 | 99.0 |
| MsG0080048151.01.T01 | MTR_5g004860 | 24.128 | 344 | 232 | 9 | 1 | 318 | 65 | 405 | 8.29e-22 | 98.2 |
| MsG0080048151.01.T01 | MTR_2g008650 | 22.951 | 366 | 260 | 9 | 4 | 350 | 74 | 436 | 2.83e-21 | 96.7 |
| MsG0080048151.01.T01 | MTR_4g014890 | 25.773 | 388 | 233 | 13 | 1 | 352 | 94 | 462 | 3.61e-21 | 96.3 |
| MsG0080048151.01.T01 | MTR_8g479260 | 22.951 | 366 | 260 | 9 | 4 | 350 | 74 | 436 | 3.78e-21 | 96.3 |
| MsG0080048151.01.T01 | MTR_1g051235 | 44.231 | 104 | 57 | 1 | 1 | 103 | 69 | 172 | 1.66e-20 | 89.0 |
| MsG0080048151.01.T01 | MTR_3g055660 | 25.210 | 476 | 297 | 18 | 1 | 438 | 94 | 548 | 1.83e-20 | 94.4 |
| MsG0080048151.01.T01 | MTR_7g070110 | 61.905 | 63 | 24 | 0 | 1 | 63 | 53 | 115 | 4.84e-20 | 85.9 |
| MsG0080048151.01.T01 | MTR_1g075850 | 23.760 | 383 | 247 | 10 | 2 | 370 | 64 | 415 | 2.36e-19 | 90.9 |
| MsG0080048151.01.T01 | MTR_6g055250 | 27.907 | 258 | 167 | 7 | 1 | 240 | 26 | 282 | 5.65e-19 | 89.0 |
| MsG0080048151.01.T01 | MTR_4g036240 | 27.178 | 287 | 188 | 9 | 80 | 350 | 6 | 287 | 7.96e-19 | 88.6 |
| MsG0080048151.01.T01 | MTR_3g046650 | 31.613 | 155 | 76 | 1 | 163 | 317 | 78 | 202 | 9.55e-19 | 85.9 |
| MsG0080048151.01.T01 | MTR_6g059860 | 23.729 | 472 | 306 | 15 | 1 | 438 | 88 | 539 | 1.60e-18 | 88.2 |
| MsG0080048151.01.T01 | MTR_5g041170 | 25.497 | 302 | 186 | 10 | 50 | 318 | 17 | 312 | 1.86e-18 | 87.8 |
| MsG0080048151.01.T01 | MTR_7g051840 | 37.255 | 102 | 61 | 1 | 2 | 103 | 27 | 125 | 5.28e-18 | 80.1 |
| MsG0080048151.01.T01 | MTR_3g108500 | 44.186 | 86 | 40 | 2 | 257 | 339 | 20 | 100 | 1.46e-17 | 82.8 |
| MsG0080048151.01.T01 | MTR_4g085760 | 22.899 | 345 | 232 | 9 | 7 | 322 | 78 | 417 | 1.21e-16 | 82.4 |
| MsG0080048151.01.T01 | MTR_1g043690 | 27.547 | 265 | 170 | 9 | 1 | 247 | 72 | 332 | 6.36e-16 | 80.5 |
| MsG0080048151.01.T01 | MTR_2g048550 | 24.021 | 383 | 250 | 17 | 1 | 355 | 69 | 438 | 2.55e-14 | 75.1 |
| MsG0080048151.01.T01 | MTR_6g445520 | 23.494 | 332 | 221 | 12 | 73 | 379 | 1 | 324 | 5.46e-14 | 73.9 |
| MsG0080048151.01.T01 | MTR_0003s0290 | 22.156 | 334 | 211 | 11 | 12 | 318 | 44 | 355 | 1.04e-13 | 73.2 |
| MsG0080048151.01.T01 | MTR_7g450880 | 23.488 | 281 | 179 | 9 | 41 | 294 | 9 | 280 | 3.24e-13 | 70.5 |
| MsG0080048151.01.T01 | MTR_4g070090 | 26.073 | 303 | 181 | 12 | 47 | 320 | 139 | 427 | 3.44e-13 | 71.6 |
| MsG0080048151.01.T01 | MTR_5g027390 | 25.073 | 343 | 229 | 12 | 1 | 320 | 58 | 395 | 1.12e-12 | 70.1 |
| MsG0080048151.01.T01 | MTR_3g103470 | 43.478 | 92 | 50 | 2 | 347 | 438 | 1 | 90 | 1.30e-12 | 63.9 |
| MsG0080048151.01.T01 | MTR_6g464080 | 22.139 | 402 | 267 | 14 | 1 | 373 | 66 | 450 | 6.61e-12 | 67.8 |
| MsG0080048151.01.T01 | MTR_4g017450 | 44.776 | 67 | 37 | 0 | 1 | 67 | 68 | 134 | 3.24e-11 | 61.2 |
| MsG0080048151.01.T01 | MTR_4g046077 | 24.000 | 250 | 177 | 9 | 71 | 314 | 38 | 280 | 5.10e-11 | 64.7 |
| MsG0080048151.01.T01 | MTR_6g045290 | 27.972 | 143 | 101 | 2 | 1 | 142 | 323 | 464 | 5.19e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048151.01.T01 | AT1G52950 | 23.208 | 293 | 192 | 9 | 20 | 285 | 87 | 373 | 3.71e-14 | 75.1 |
| MsG0080048151.01.T01 | AT2G05642 | 18.200 | 500 | 302 | 14 | 2 | 435 | 70 | 528 | 4.13e-11 | 65.5 |
Find 85 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATGAACATTTGAATTATT+TGG | 0.166593 | contig223end:+6910 | None:intergenic |
| CCACTTGCATTGCTCTCTTT+GGG | 0.202399 | contig223end:-8419 | MsG0080048151.01.T01:CDS |
| ACCACTTGCATTGCTCTCTT+TGG | 0.221388 | contig223end:-8420 | MsG0080048151.01.T01:CDS |
| TGCAAGACACGCATGTATTT+AGG | 0.278275 | contig223end:-8319 | MsG0080048151.01.T01:CDS |
| GCACATTACGCCCAATAAAC+TGG | 0.284869 | contig223end:+7385 | None:intergenic |
| CGCCAGGTGACCCAGTTTAT+TGG | 0.287098 | contig223end:-7396 | MsG0080048151.01.T01:CDS |
| TTGTGTGAAGTTAACTTATA+AGG | 0.292516 | contig223end:+8888 | None:intergenic |
| GGACCTCTTAGCACCTGTTT+TGG | 0.300072 | contig223end:+6742 | None:intergenic |
| CAGCTTGAAAATGCAATTGT+AGG | 0.306782 | contig223end:-8924 | MsG0080048151.01.T01:CDS |
| GGTTATTGATCTCACTTTAG+AGG | 0.325580 | contig223end:-8551 | MsG0080048151.01.T01:CDS |
| TAATTGAAAGAGGTGATATA+AGG | 0.328150 | contig223end:-8603 | MsG0080048151.01.T01:CDS |
| TACGTAATTTCAGATGTTAT+TGG | 0.335367 | contig223end:-8631 | MsG0080048151.01.T01:intron |
| ACTATATGTGAGATCAAAAC+TGG | 0.348159 | contig223end:-7666 | MsG0080048151.01.T01:CDS |
| GCCAGGTGACCCAGTTTATT+GGG | 0.358263 | contig223end:-7395 | MsG0080048151.01.T01:CDS |
| TGAAATCTGGCTGACACTTC+GGG | 0.360423 | contig223end:+7893 | None:intergenic |
| CACAGAGTCAATGCTATTAG+AGG | 0.396125 | contig223end:+6721 | None:intergenic |
| ATGCACCCAGTGTGCTTCAT+TGG | 0.403027 | contig223end:-7622 | MsG0080048151.01.T01:CDS |
| TTGAAATCTGGCTGACACTT+CGG | 0.410210 | contig223end:+7892 | None:intergenic |
| CGGAGCTATTCGTTGAAATC+TGG | 0.415790 | contig223end:+7880 | None:intergenic |
| GACACACCAACCACCAAAAC+AGG | 0.418702 | contig223end:-6755 | MsG0080048151.01.T01:CDS |
| AAATAATTCAAATGTTCATA+TGG | 0.421779 | contig223end:-6908 | MsG0080048151.01.T01:intron |
| GAAGAGAGAATTTCATTGAA+TGG | 0.432380 | contig223end:+8783 | None:intergenic |
| TATGTTTAAGTATAATTTGA+AGG | 0.442348 | contig223end:-7085 | MsG0080048151.01.T01:intron |
| CTTGGGACTGCACCCTTGCA+AGG | 0.450946 | contig223end:+7558 | None:intergenic |
| TCATGCCTTCAATTGTCATT+CGG | 0.451104 | contig223end:+7826 | None:intergenic |
| AACTGTCGAGGAAGTGTCTA+CGG | 0.454569 | contig223end:-8760 | MsG0080048151.01.T01:CDS |
| ACCAACCGAATGACAATTGA+AGG | 0.461353 | contig223end:-7831 | MsG0080048151.01.T01:CDS |
| CACTTGCATTGCTCTCTTTG+GGG | 0.462664 | contig223end:-8418 | MsG0080048151.01.T01:CDS |
| GCCTTCAATTGTCATTCGGT+TGG | 0.469129 | contig223end:+7830 | None:intergenic |
| TTCAGGTCCATGGTTGAAGA+AGG | 0.473259 | contig223end:-8957 | None:intergenic |
| GAAATGTCGTAAAGAAGTAT+TGG | 0.483444 | contig223end:-7158 | MsG0080048151.01.T01:CDS |
| TTTACAGATCTGTCAAGGTT+CGG | 0.485784 | contig223end:-7697 | MsG0080048151.01.T01:intron |
| AATTGAAAGAGGTGATATAA+GGG | 0.489125 | contig223end:-8602 | MsG0080048151.01.T01:CDS |
| CTGCATGAGTCCTCAACCTC+TGG | 0.491342 | contig223end:+6794 | None:intergenic |
| GCCCAATAAACTGGGTCACC+TGG | 0.499906 | contig223end:+7394 | None:intergenic |
| AACTGAAATATCAATATAGT+AGG | 0.504939 | contig223end:+8343 | None:intergenic |
| GATAGCAGGCGAGTGTACTT+TGG | 0.506539 | contig223end:+8830 | None:intergenic |
| ATCAGCACATTAAAATCAGC+AGG | 0.507382 | contig223end:+7219 | None:intergenic |
| CACATTACGCCCAATAAACT+GGG | 0.508234 | contig223end:+7386 | None:intergenic |
| CTCTAATAGCATTGACTCTG+TGG | 0.521605 | contig223end:-6720 | MsG0080048151.01.T01:CDS |
| TTCAAGGTTGAGGTTGGTGA+AGG | 0.523411 | contig223end:-7180 | MsG0080048151.01.T01:CDS |
| GTTGTTGAGCTTAGTGTGGA+TGG | 0.524110 | contig223end:-6940 | MsG0080048151.01.T01:CDS |
| TGATATAAGGGAAACTGAAA+AGG | 0.524272 | contig223end:-8590 | MsG0080048151.01.T01:CDS |
| GCAGGATGTACCAGAGGTTG+AGG | 0.530069 | contig223end:-6804 | MsG0080048151.01.T01:intron |
| TTGGAATTATGTCGTAAAGA+AGG | 0.531405 | contig223end:-7139 | MsG0080048151.01.T01:CDS |
| ATAAGGGAAACTGAAAAGGA+TGG | 0.532230 | contig223end:-8586 | MsG0080048151.01.T01:CDS |
| ATTGGTCATGTAATTGAAAG+AGG | 0.535259 | contig223end:-8613 | MsG0080048151.01.T01:CDS |
| TCGCAAGTGTAAACCTTGCA+AGG | 0.539763 | contig223end:-7571 | MsG0080048151.01.T01:CDS |
| AAAACGTTCATAGGGATAGC+AGG | 0.542724 | contig223end:+8816 | None:intergenic |
| CAGGTCCATGGTTGAAGAAG+GGG | 0.549020 | contig223end:-8955 | None:intergenic |
| TTGACACGAACAACTCTGGT+AGG | 0.549701 | contig223end:+6656 | None:intergenic |
| TCAGGTCCATGGTTGAAGAA+GGG | 0.552024 | contig223end:-8956 | None:intergenic |
| TCAACAACAGATCCATCGTC+GGG | 0.557450 | contig223end:+6955 | None:intergenic |
| CGGTGGCCAATGAAGCACAC+TGG | 0.566637 | contig223end:+7616 | None:intergenic |
| CCACCAAAACAGGTGCTAAG+AGG | 0.573345 | contig223end:-6745 | MsG0080048151.01.T01:CDS |
| ACTGTCGAGGAAGTGTCTAC+GGG | 0.577481 | contig223end:-8759 | MsG0080048151.01.T01:intron |
| GGGAAACTGAAAAGGATGGA+AGG | 0.581802 | contig223end:-8582 | MsG0080048151.01.T01:CDS |
| GAGCACTCCGTTGTCAGCGG+TGG | 0.583476 | contig223end:+7599 | None:intergenic |
| CTATATGTGAGATCAAAACT+GGG | 0.587344 | contig223end:-7665 | MsG0080048151.01.T01:CDS |
| CTCAACAACAGATCCATCGT+CGG | 0.590122 | contig223end:+6954 | None:intergenic |
| GGTGGCCAATGAAGCACACT+GGG | 0.590767 | contig223end:+7617 | None:intergenic |
| ATCTGTTGTTGAGCTTAGTG+TGG | 0.594833 | contig223end:-6944 | MsG0080048151.01.T01:CDS |
| TAGTAGGTGTGTGGTTGTCA+TGG | 0.596523 | contig223end:+8359 | None:intergenic |
| AATTCTCTCTTCAACTGTCG+AGG | 0.602150 | contig223end:-8772 | MsG0080048151.01.T01:CDS |
| CTTGCAAGGGTGCAGTCCCA+AGG | 0.605354 | contig223end:-7557 | MsG0080048151.01.T01:intron |
| AAATATTTACAGATCTGTCA+AGG | 0.607093 | contig223end:-7702 | MsG0080048151.01.T01:intron |
| GTCATCGTGATGGACGACAC+AGG | 0.607107 | contig223end:-7444 | MsG0080048151.01.T01:CDS |
| CGCAAGTGTAAACCTTGCAA+GGG | 0.607431 | contig223end:-7570 | MsG0080048151.01.T01:CDS |
| TCATTGGCCACCGCTGACAA+CGG | 0.610894 | contig223end:-7606 | MsG0080048151.01.T01:CDS |
| TCGTGTCAAAATTGAGCACA+AGG | 0.614456 | contig223end:-6642 | MsG0080048151.01.T01:CDS |
| CAAGCTGCATGTCATCGTGA+TGG | 0.617455 | contig223end:-7454 | MsG0080048151.01.T01:CDS |
| CCCAAAGAGAGCAATGCAAG+TGG | 0.621311 | contig223end:+8419 | None:intergenic |
| GCTGTTGATGATGATAAAGC+TGG | 0.623827 | contig223end:-6698 | MsG0080048151.01.T01:CDS |
| TCATCGTGATGGACGACACA+GGG | 0.632753 | contig223end:-7443 | MsG0080048151.01.T01:CDS |
| ACGTGATAGAAACCCGACGA+TGG | 0.636755 | contig223end:-6967 | MsG0080048151.01.T01:intron |
| AAAGGATGGAAGGAAAAGCA+TGG | 0.649132 | contig223end:-8572 | MsG0080048151.01.T01:CDS |
| AAGAAGGCATCTGATGATGT+TGG | 0.653044 | contig223end:-7123 | MsG0080048151.01.T01:CDS |
| ATGTCTGCAGGATGTACCAG+AGG | 0.670047 | contig223end:-6810 | MsG0080048151.01.T01:intron |
| AGGTCCATGGTTGAAGAAGG+GGG | 0.671399 | contig223end:-8954 | None:intergenic |
| CAAGTCATCTGATAAAGACG+CGG | 0.674931 | contig223end:+7860 | None:intergenic |
| ACAGAGCACTCCGTTGTCAG+CGG | 0.680943 | contig223end:+7596 | None:intergenic |
| TGATAAAGCTGGCCAGACGT+CGG | 0.689377 | contig223end:-6687 | MsG0080048151.01.T01:CDS |
| TATATGTGAGATCAAAACTG+GGG | 0.744326 | contig223end:-7664 | MsG0080048151.01.T01:CDS |
| ATATCAATATAGTAGGTGTG+TGG | 0.746817 | contig223end:+8350 | None:intergenic |
| AGGCATGATTGAGTCAACTG+AGG | 0.789444 | contig223end:-7811 | MsG0080048151.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTCAATTATTATTAAT+AGG | - | contig223end:7548-7567 | MsG0080048151.01.T01:intron | 10.0% |
| !!! | TATTGAATTTTTGAAAAATT+AGG | - | contig223end:7345-7364 | MsG0080048151.01.T01:intron | 10.0% |
| !! | AAATAATTCAAATGTTCATA+TGG | - | contig223end:8665-8684 | MsG0080048151.01.T01:intron | 15.0% |
| !! | ATATGAACATTTGAATTATT+TGG | + | contig223end:8666-8685 | None:intergenic | 15.0% |
| !! | TATATAATTGTATAAATGTG+TGG | - | contig223end:8248-8267 | MsG0080048151.01.T01:intron | 15.0% |
| !! | TATGTTTAAGTATAATTTGA+AGG | - | contig223end:8488-8507 | MsG0080048151.01.T01:intron | 15.0% |
| !!! | CATTTTTCATTCTAATAAAA+GGG | + | contig223end:7645-7664 | None:intergenic | 15.0% |
| !!! | GAAATTTTAAGATGTATTTT+TGG | - | contig223end:7801-7820 | MsG0080048151.01.T01:intron | 15.0% |
| !! | AACTGAAATATCAATATAGT+AGG | + | contig223end:7233-7252 | None:intergenic | 20.0% |
| !! | GATATAGTTGATTATTTGAT+AGG | - | contig223end:8094-8113 | MsG0080048151.01.T01:intron | 20.0% |
| !! | GTTCAATATATTTATGCAAA+AGG | - | contig223end:7843-7862 | MsG0080048151.01.T01:CDS | 20.0% |
| !! | TATTACCAAAATATCAATTC+AGG | + | contig223end:7117-7136 | None:intergenic | 20.0% |
| !! | TTATAGAATAATGCACATAA+AGG | - | contig223end:8544-8563 | MsG0080048151.01.T01:CDS | 20.0% |
| !! | TTTGAAAAATTAGGTGATAT+GGG | - | contig223end:7354-7373 | MsG0080048151.01.T01:intron | 20.0% |
| !!! | ACATTTTATTATTTTTGAGC+AGG | - | contig223end:8311-8330 | MsG0080048151.01.T01:CDS | 20.0% |
| !!! | CATTTTATTATTTTTGAGCA+GGG | - | contig223end:8312-8331 | MsG0080048151.01.T01:CDS | 20.0% |
| !!! | GCATTTTTCATTCTAATAAA+AGG | + | contig223end:7646-7665 | None:intergenic | 20.0% |
| !!! | TTTTGAAAAATTAGGTGATA+TGG | - | contig223end:7353-7372 | MsG0080048151.01.T01:intron | 20.0% |
| ! | AAATATTTACAGATCTGTCA+AGG | - | contig223end:7871-7890 | MsG0080048151.01.T01:CDS | 25.0% |
| ! | AATATCAATTCAGGAACATA+AGG | + | contig223end:7108-7127 | None:intergenic | 25.0% |
| ! | AATTGAAAGAGGTGATATAA+GGG | - | contig223end:6971-6990 | MsG0080048151.01.T01:intron | 25.0% |
| ! | ATCAAAAAGAACAAAAGTAG+TGG | + | contig223end:8157-8176 | None:intergenic | 25.0% |
| ! | ATCACGTATACATCAATAAA+GGG | + | contig223end:8593-8612 | None:intergenic | 25.0% |
| ! | CAAATGTATGAAATTCCTAA+AGG | + | contig223end:6901-6920 | None:intergenic | 25.0% |
| ! | CAATTTGATCAATTGTGTTA+TGG | + | contig223end:8733-8752 | None:intergenic | 25.0% |
| ! | GTAGAACATAACTGATATTA+CGG | - | contig223end:8510-8529 | MsG0080048151.01.T01:intron | 25.0% |
| ! | TAATTGAAAGAGGTGATATA+AGG | - | contig223end:6970-6989 | MsG0080048151.01.T01:intron | 25.0% |
| ! | TACGTAATTTCAGATGTTAT+TGG | - | contig223end:6942-6961 | MsG0080048151.01.T01:CDS | 25.0% |
| ! | TATCACGTATACATCAATAA+AGG | + | contig223end:8594-8613 | None:intergenic | 25.0% |
| ! | TTGTGTGAAGTTAACTTATA+AGG | + | contig223end:6688-6707 | None:intergenic | 25.0% |
| !! | AATTGTTAGTGGATATCTTT+AGG | + | contig223end:7425-7444 | None:intergenic | 25.0% |
| !! | ATGTTAGTTCAAATTTTCGT+CGG | + | contig223end:8295-8314 | None:intergenic | 25.0% |
| !! | ATGTTCCTGAATTGATATTT+TGG | - | contig223end:7109-7128 | MsG0080048151.01.T01:CDS | 25.0% |
| !! | ATTGTTAGTGGATATCTTTA+GGG | + | contig223end:7424-7443 | None:intergenic | 25.0% |
| !! | GGATAAAATTTGTTTACCTT+GGG | + | contig223end:8035-8054 | None:intergenic | 25.0% |
| !! | TGTTATGGATTAAACCTTTA+CGG | + | contig223end:8718-8737 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTTTATCATGCG+TGG | - | contig223end:8062-8081 | MsG0080048151.01.T01:intron | 25.0% |
| AAATGTGTGGTCTATATATG+AGG | - | contig223end:8261-8280 | MsG0080048151.01.T01:intron | 30.0% | |
| ACTATATGTGAGATCAAAAC+TGG | - | contig223end:7907-7926 | MsG0080048151.01.T01:CDS | 30.0% | |
| AGAATAATGCACATAAAGGA+AGG | - | contig223end:8548-8567 | MsG0080048151.01.T01:CDS | 30.0% | |
| ATATCAATATAGTAGGTGTG+TGG | + | contig223end:7226-7245 | None:intergenic | 30.0% | |
| ATTCCTAAAGGAATGCTTAT+AGG | + | contig223end:6889-6908 | None:intergenic | 30.0% | |
| ATTGGTCATGTAATTGAAAG+AGG | - | contig223end:6960-6979 | MsG0080048151.01.T01:CDS | 30.0% | |
| CATCAGAAAACAATTGTTAG+TGG | + | contig223end:7436-7455 | None:intergenic | 30.0% | |
| CTATATGTGAGATCAAAACT+GGG | - | contig223end:7908-7927 | MsG0080048151.01.T01:CDS | 30.0% | |
| GAAGAGAGAATTTCATTGAA+TGG | + | contig223end:6793-6812 | None:intergenic | 30.0% | |
| TATATGTGAGATCAAAACTG+GGG | - | contig223end:7909-7928 | MsG0080048151.01.T01:CDS | 30.0% | |
| TGAACTCAAAAACGTTCATA+GGG | + | contig223end:6768-6787 | None:intergenic | 30.0% | |
| TGATATAAGGGAAACTGAAA+AGG | - | contig223end:6983-7002 | MsG0080048151.01.T01:intron | 30.0% | |
| TTGAACTCAAAAACGTTCAT+AGG | + | contig223end:6769-6788 | None:intergenic | 30.0% | |
| TTGGAATTATGTCGTAAAGA+AGG | - | contig223end:8434-8453 | MsG0080048151.01.T01:intron | 30.0% | |
| ! | CACTAACAATTGTTTTCTGA+TGG | - | contig223end:7434-7453 | MsG0080048151.01.T01:CDS | 30.0% |
| ! | CGGATAAAATTTGTTTACCT+TGG | + | contig223end:8036-8055 | None:intergenic | 30.0% |
| ! | GAAATGTCGTAAAGAAGTAT+TGG | - | contig223end:8415-8434 | MsG0080048151.01.T01:CDS | 30.0% |
| ! | TGACAAGCAAATTCTTTTCA+AGG | - | contig223end:8377-8396 | MsG0080048151.01.T01:CDS | 30.0% |
| !! | AGTTTTGATCTCACATATAG+TGG | + | contig223end:7908-7927 | None:intergenic | 30.0% |
| !! | GCAATTGTAGGTTTTAATGA+AGG | - | contig223end:6661-6680 | MsG0080048151.01.T01:CDS | 30.0% |
| !!! | GACAAAATTGTGACCTTTTT+TGG | - | contig223end:7188-7207 | MsG0080048151.01.T01:CDS | 30.0% |
| AATCTTTCATGAGTCCGTAA+AGG | - | contig223end:8701-8720 | MsG0080048151.01.T01:intron | 35.0% | |
| ATAAGCTACCCATAAACGAT+CGG | + | contig223end:7390-7409 | None:intergenic | 35.0% | |
| ATAAGGGAAACTGAAAAGGA+TGG | - | contig223end:6987-7006 | MsG0080048151.01.T01:intron | 35.0% | |
| ATCAGCACATTAAAATCAGC+AGG | + | contig223end:8357-8376 | None:intergenic | 35.0% | |
| CAGCTTGAAAATGCAATTGT+AGG | - | contig223end:6649-6668 | MsG0080048151.01.T01:CDS | 35.0% | |
| CTACCTATAAGCATTCCTTT+AGG | - | contig223end:6883-6902 | MsG0080048151.01.T01:intron | 35.0% | |
| GGTTATTGATCTCACTTTAG+AGG | - | contig223end:7022-7041 | MsG0080048151.01.T01:intron | 35.0% | |
| TCATGCCTTCAATTGTCATT+CGG | + | contig223end:7750-7769 | None:intergenic | 35.0% | |
| TCGTTTATGGGTAGCTTATT+TGG | - | contig223end:7391-7410 | MsG0080048151.01.T01:CDS | 35.0% | |
| TTTACAGATCTGTCAAGGTT+CGG | - | contig223end:7876-7895 | MsG0080048151.01.T01:CDS | 35.0% | |
| ! | TTTGTCTGTTTCTTTGTAGC+TGG | - | contig223end:7058-7077 | MsG0080048151.01.T01:intron | 35.0% |
| ! | TTTTGTTCTTTTTGATCGCC+AGG | - | contig223end:8161-8180 | MsG0080048151.01.T01:intron | 35.0% |
| !! | AATTTTGACACGAACAACTC+TGG | + | contig223end:8924-8943 | None:intergenic | 35.0% |
| !! | ATTCTTTTCAAGGTTGAGGT+TGG | - | contig223end:8387-8406 | MsG0080048151.01.T01:CDS | 35.0% |
| !! | GCAAATTCTTTTCAAGGTTG+AGG | - | contig223end:8383-8402 | MsG0080048151.01.T01:CDS | 35.0% |
| AAAACGTTCATAGGGATAGC+AGG | + | contig223end:6760-6779 | None:intergenic | 40.0% | |
| AAAGGATGGAAGGAAAAGCA+TGG | - | contig223end:7001-7020 | MsG0080048151.01.T01:intron | 40.0% | |
| AATTCTCTCTTCAACTGTCG+AGG | - | contig223end:6801-6820 | MsG0080048151.01.T01:CDS | 40.0% | |
| ACCAACCGAATGACAATTGA+AGG | - | contig223end:7742-7761 | MsG0080048151.01.T01:intron | 40.0% | |
| ACTTGATCATGAACGTGATG+AGG | - | contig223end:8214-8233 | MsG0080048151.01.T01:intron | 40.0% | |
| AGAAGATGTGCACACAGAAA+AGG | - | contig223end:7490-7509 | MsG0080048151.01.T01:intron | 40.0% | |
| AGACTCAAGAAGCAAGGTAA+GGG | + | contig223end:7597-7616 | None:intergenic | 40.0% | |
| ATCTGTTGTTGAGCTTAGTG+TGG | - | contig223end:8629-8648 | MsG0080048151.01.T01:intron | 40.0% | |
| CAAGTCATCTGATAAAGACG+CGG | + | contig223end:7716-7735 | None:intergenic | 40.0% | |
| CACAGAGTCAATGCTATTAG+AGG | + | contig223end:8855-8874 | None:intergenic | 40.0% | |
| CACATTACGCCCAATAAACT+GGG | + | contig223end:8190-8209 | None:intergenic | 40.0% | |
| CGCTACTCTTCTATTGACAT+TGG | - | contig223end:7617-7636 | MsG0080048151.01.T01:CDS | 40.0% | |
| GAAGATGTGCACACAGAAAA+GGG | - | contig223end:7491-7510 | MsG0080048151.01.T01:intron | 40.0% | |
| GTTGTCATGGTTGCCAAAAA+AGG | + | contig223end:7204-7223 | None:intergenic | 40.0% | |
| TCGTGTCAAAATTGAGCACA+AGG | - | contig223end:8931-8950 | MsG0080048151.01.T01:CDS | 40.0% | |
| TGCAAGACACGCATGTATTT+AGG | - | contig223end:7254-7273 | MsG0080048151.01.T01:intron | 40.0% | |
| TTGAAATCTGGCTGACACTT+CGG | + | contig223end:7684-7703 | None:intergenic | 40.0% | |
| !! | AAGAAGGCATCTGATGATGT+TGG | - | contig223end:8450-8469 | MsG0080048151.01.T01:intron | 40.0% |
| !! | CTCTAATAGCATTGACTCTG+TGG | - | contig223end:8853-8872 | MsG0080048151.01.T01:CDS | 40.0% |
| !! | GCTGTTGATGATGATAAAGC+TGG | - | contig223end:8875-8894 | MsG0080048151.01.T01:CDS | 40.0% |
| ACCACTTGCATTGCTCTCTT+TGG | - | contig223end:7153-7172 | MsG0080048151.01.T01:CDS | 45.0% | |
| AGGCATGATTGAGTCAACTG+AGG | - | contig223end:7762-7781 | MsG0080048151.01.T01:intron | 45.0% | |
| CACTTGCATTGCTCTCTTTG+GGG | - | contig223end:7155-7174 | MsG0080048151.01.T01:CDS | 45.0% | |
| CATGATTGAGTCAACTGAGG+TGG | - | contig223end:7765-7784 | MsG0080048151.01.T01:intron | 45.0% | |
| CCACTTGCATTGCTCTCTTT+GGG | - | contig223end:7154-7173 | MsG0080048151.01.T01:CDS | 45.0% | |
| CGCAAGTGTAAACCTTGCAA+GGG | - | contig223end:8003-8022 | MsG0080048151.01.T01:intron | 45.0% | |
| CGGAGCTATTCGTTGAAATC+TGG | + | contig223end:7696-7715 | None:intergenic | 45.0% | |
| CTCAACAACAGATCCATCGT+CGG | + | contig223end:8622-8641 | None:intergenic | 45.0% | |
| GAGACTCAAGAAGCAAGGTA+AGG | + | contig223end:7598-7617 | None:intergenic | 45.0% | |
| GCACATTACGCCCAATAAAC+TGG | + | contig223end:8191-8210 | None:intergenic | 45.0% | |
| GCCTTCAATTGTCATTCGGT+TGG | + | contig223end:7746-7765 | None:intergenic | 45.0% | |
| GGGAAACTGAAAAGGATGGA+AGG | - | contig223end:6991-7010 | MsG0080048151.01.T01:intron | 45.0% | |
| GTTGTTGAGCTTAGTGTGGA+TGG | - | contig223end:8633-8652 | MsG0080048151.01.T01:intron | 45.0% | |
| TAGTAGGTGTGTGGTTGTCA+TGG | + | contig223end:7217-7236 | None:intergenic | 45.0% | |
| TCAACAACAGATCCATCGTC+GGG | + | contig223end:8621-8640 | None:intergenic | 45.0% | |
| TCGCAAGTGTAAACCTTGCA+AGG | - | contig223end:8002-8021 | MsG0080048151.01.T01:intron | 45.0% | |
| TGAAATCTGGCTGACACTTC+GGG | + | contig223end:7683-7702 | None:intergenic | 45.0% | |
| TGTTTGTCACCAATGTCTGC+AGG | - | contig223end:8751-8770 | MsG0080048151.01.T01:intron | 45.0% | |
| TTGACACGAACAACTCTGGT+AGG | + | contig223end:8920-8939 | None:intergenic | 45.0% | |
| TTTGCCCTCCGATCGTTTAT+GGG | - | contig223end:7379-7398 | MsG0080048151.01.T01:CDS | 45.0% | |
| !! | AACTGTCGAGGAAGTGTCTA+CGG | - | contig223end:6813-6832 | MsG0080048151.01.T01:intron | 45.0% |
| !! | ATTTTTGAGCAGGGAGCAGT+AGG | - | contig223end:8321-8340 | MsG0080048151.01.T01:CDS | 45.0% |
| !! | TTCAAGGTTGAGGTTGGTGA+AGG | - | contig223end:8393-8412 | MsG0080048151.01.T01:CDS | 45.0% |
| !!! | TTAGCACCTGTTTTGGTGGT+TGG | + | contig223end:8827-8846 | None:intergenic | 45.0% |
| !! | ATAAAAACAAAAATTATATT+CGG | + | contig223end:8056-8075 | None:intergenic | 5.0% |
| ACGTGATAGAAACCCGACGA+TGG | - | contig223end:8606-8625 | MsG0080048151.01.T01:CDS | 50.0% | |
| AGCTACCCATAAACGATCGG+AGG | + | contig223end:7387-7406 | None:intergenic | 50.0% | |
| ATGCACCCAGTGTGCTTCAT+TGG | - | contig223end:7951-7970 | MsG0080048151.01.T01:intron | 50.0% | |
| ATGTCTGCAGGATGTACCAG+AGG | - | contig223end:8763-8782 | MsG0080048151.01.T01:CDS | 50.0% | |
| CAAGCTGCATGTCATCGTGA+TGG | - | contig223end:8119-8138 | MsG0080048151.01.T01:intron | 50.0% | |
| CCACCAAAACAGGTGCTAAG+AGG | - | contig223end:8828-8847 | MsG0080048151.01.T01:CDS | 50.0% | |
| CCCAAAGAGAGCAATGCAAG+TGG | + | contig223end:7157-7176 | None:intergenic | 50.0% | |
| CTGGTACATCCTGCAGACAT+TGG | + | contig223end:8763-8782 | None:intergenic | 50.0% | |
| GACACACCAACCACCAAAAC+AGG | - | contig223end:8818-8837 | MsG0080048151.01.T01:CDS | 50.0% | |
| GATAGCAGGCGAGTGTACTT+TGG | + | contig223end:6746-6765 | None:intergenic | 50.0% | |
| GCCAGGTGACCCAGTTTATT+GGG | - | contig223end:8178-8197 | MsG0080048151.01.T01:intron | 50.0% | |
| GCTACCCATAAACGATCGGA+GGG | + | contig223end:7386-7405 | None:intergenic | 50.0% | |
| GTAGCGAGACTCAAGAAGCA+AGG | + | contig223end:7603-7622 | None:intergenic | 50.0% | |
| GTTTGCCCTCCGATCGTTTA+TGG | - | contig223end:7378-7397 | MsG0080048151.01.T01:CDS | 50.0% | |
| TGATAAAGCTGGCCAGACGT+CGG | - | contig223end:8886-8905 | MsG0080048151.01.T01:CDS | 50.0% | |
| ! | GGACCTCTTAGCACCTGTTT+TGG | + | contig223end:8834-8853 | None:intergenic | 50.0% |
| !! | ACTGTCGAGGAAGTGTCTAC+GGG | - | contig223end:6814-6833 | MsG0080048151.01.T01:intron | 50.0% |
| !! | CCTCTTAGCACCTGTTTTGG+TGG | + | contig223end:8831-8850 | None:intergenic | 50.0% |
| !! | TAGGTTTTGTGACCGACGTC+TGG | + | contig223end:8901-8920 | None:intergenic | 50.0% |
| !! | TCATCGTGATGGACGACACA+GGG | - | contig223end:8130-8149 | MsG0080048151.01.T01:intron | 50.0% |
| CGCCAGGTGACCCAGTTTAT+TGG | - | contig223end:8177-8196 | MsG0080048151.01.T01:intron | 55.0% | |
| CTGCATGAGTCCTCAACCTC+TGG | + | contig223end:8782-8801 | None:intergenic | 55.0% | |
| GCAGGATGTACCAGAGGTTG+AGG | - | contig223end:8769-8788 | MsG0080048151.01.T01:CDS | 55.0% | |
| GCCCAATAAACTGGGTCACC+TGG | + | contig223end:8182-8201 | None:intergenic | 55.0% | |
| GGTGGCCAATGAAGCACACT+GGG | + | contig223end:7959-7978 | None:intergenic | 55.0% | |
| TCATTGGCCACCGCTGACAA+CGG | - | contig223end:7967-7986 | MsG0080048151.01.T01:intron | 55.0% | |
| ! | ACAGAGCACTCCGTTGTCAG+CGG | + | contig223end:7980-7999 | None:intergenic | 55.0% |
| !! | GTCATCGTGATGGACGACAC+AGG | - | contig223end:8129-8148 | MsG0080048151.01.T01:intron | 55.0% |
| CGGTGGCCAATGAAGCACAC+TGG | + | contig223end:7960-7979 | None:intergenic | 60.0% | |
| CTTGGGACTGCACCCTTGCA+AGG | + | contig223end:8018-8037 | None:intergenic | 60.0% | |
| ! | CTTGCAAGGGTGCAGTCCCA+AGG | - | contig223end:8016-8035 | MsG0080048151.01.T01:intron | 60.0% |
| GAGCACTCCGTTGTCAGCGG+TGG | + | contig223end:7977-7996 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig223end | gene | 6625 | 8970 | 6625 | ID=MsG0080048151.01;Name=MsG0080048151.01 |
| contig223end | mRNA | 6625 | 8970 | 6625 | ID=MsG0080048151.01.T01;Parent=MsG0080048151.01;Name=MsG0080048151.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.77|0.87|0.88|9|0|442 |
| contig223end | exon | 8760 | 8970 | 8760 | ID=MsG0080048151.01.T01:exon:39469;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 8544 | 8640 | 8544 | ID=MsG0080048151.01.T01:exon:39468;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 8271 | 8447 | 8271 | ID=MsG0080048151.01.T01:exon:39467;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 7812 | 7941 | 7812 | ID=MsG0080048151.01.T01:exon:39466;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 7558 | 7712 | 7558 | ID=MsG0080048151.01.T01:exon:39465;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 7368 | 7479 | 7368 | ID=MsG0080048151.01.T01:exon:39464;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 7086 | 7262 | 7086 | ID=MsG0080048151.01.T01:exon:39463;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 6909 | 6980 | 6909 | ID=MsG0080048151.01.T01:exon:39462;Parent=MsG0080048151.01.T01 |
| contig223end | exon | 6625 | 6822 | 6625 | ID=MsG0080048151.01.T01:exon:39461;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 8760 | 8970 | 8760 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 8544 | 8640 | 8544 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 8271 | 8447 | 8271 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 7812 | 7941 | 7812 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 7558 | 7712 | 7558 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 7368 | 7479 | 7368 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 7086 | 7262 | 7086 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 6909 | 6980 | 6909 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| contig223end | CDS | 6625 | 6822 | 6625 | ID=MsG0080048151.01.T01:cds;Parent=MsG0080048151.01.T01 |
| Gene Sequence |
| Protein sequence |
