AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002518.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002518.01.T01 MTR_4g013185 63.454 249 57 1 524 738 163 411 1.46e-98 313
MsG0180002518.01.T01 MTR_7g024060 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_6g087820 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_5g081190 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_5g091480 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_5g056290 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_3g031190 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_2g005490 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_2g010570 87.356 174 18 1 1 170 117 290 1.31e-97 307
MsG0180002518.01.T01 MTR_5g030110 87.356 174 18 1 1 170 117 290 1.38e-97 307
MsG0180002518.01.T01 MTR_2g007410 87.356 174 18 1 1 170 117 290 1.38e-97 307
MsG0180002518.01.T01 MTR_8g446640 86.364 176 20 1 1 172 98 273 1.53e-97 306
MsG0180002518.01.T01 MTR_7g451880 84.659 176 23 1 1 172 118 293 2.21e-96 303
MsG0180002518.01.T01 MTR_4g013175 61.811 254 63 1 524 743 163 416 1.28e-95 305
MsG0180002518.01.T01 MTR_4g058660 84.091 176 24 1 1 172 117 292 3.24e-95 300
MsG0180002518.01.T01 MTR_2g010270 81.622 185 21 2 1 172 98 282 4.17e-95 300
MsG0180002518.01.T01 MTR_7g074180 83.523 176 25 1 1 172 117 292 2.06e-94 298
MsG0180002518.01.T01 MTR_4g008790 61.011 277 45 6 516 747 187 445 7.71e-92 296
MsG0180002518.01.T01 MTR_4g008790 85.246 61 9 0 459 519 1 61 1.07e-19 93.6
MsG0180002518.01.T01 MTR_1g105785 38.072 415 195 5 1 386 117 498 2.30e-87 288
MsG0180002518.01.T01 MTR_1g011490 80.114 176 22 2 1 172 117 283 3.92e-86 276
MsG0180002518.01.T01 MTR_5g012180 73.370 184 33 2 4 187 75 242 1.07e-82 265
MsG0180002518.01.T01 MTR_1g023370 77.011 174 17 2 1 170 117 271 6.91e-81 262
MsG0180002518.01.T01 MTR_7g110100 37.046 413 192 7 4 385 120 495 7.55e-80 266
MsG0180002518.01.T01 MTR_5g045850 76.744 172 26 2 1 172 102 259 1.69e-79 258
MsG0180002518.01.T01 MTR_1g088120 57.422 256 70 4 524 743 149 401 3.98e-78 258
MsG0180002518.01.T01 MTR_3g036220 67.935 184 29 2 4 187 75 228 3.82e-73 239
MsG0180002518.01.T01 MTR_8g005940 69.767 172 23 1 1 172 117 259 1.02e-69 232
MsG0180002518.01.T01 MTR_3g015660 88.000 125 11 1 1 121 117 241 8.19e-69 228
MsG0180002518.01.T01 MTR_4g013180 52.459 244 73 4 534 740 153 390 1.17e-65 227
MsG0180002518.01.T01 MTR_0105s0080 87.603 121 11 1 1 117 73 193 4.07e-65 218
MsG0180002518.01.T01 MTR_7g051400 33.090 411 199 7 1 386 117 476 2.55e-63 222
MsG0180002518.01.T01 MTR_3g013470 47.200 250 83 3 531 743 131 368 1.01e-58 204
MsG0180002518.01.T01 MTR_7g078840 46.154 247 93 3 534 743 179 422 1.38e-57 203
MsG0180002518.01.T01 MTR_5g058620 45.556 270 96 8 520 746 14 275 4.15e-57 197
MsG0180002518.01.T01 MTR_1g058870 45.556 270 96 8 520 746 14 275 4.15e-57 197
MsG0180002518.01.T01 MTR_0048s0080 39.465 299 115 6 23 300 5 258 5.66e-57 199
MsG0180002518.01.T01 MTR_4g128320 43.774 265 112 8 491 728 11 265 2.63e-55 192
MsG0180002518.01.T01 MTR_1g082860 80.342 117 10 2 1 113 117 224 7.38e-54 188
MsG0180002518.01.T01 MTR_5g071020 56.522 184 29 3 4 187 75 207 2.54e-52 182
MsG0180002518.01.T01 MTR_7g078900 45.494 233 87 3 534 732 175 401 8.84e-52 187
MsG0180002518.01.T01 MTR_2g435900 89.130 92 10 0 4 95 22 113 1.05e-51 176
MsG0180002518.01.T01 MTR_3g449160 88.043 92 11 0 4 95 22 113 1.25e-51 176
MsG0180002518.01.T01 MTR_7g078860 46.018 226 80 5 536 726 164 382 3.72e-50 181
MsG0180002518.01.T01 MTR_7g078040 44.033 243 88 7 536 736 179 415 1.07e-49 181
MsG0180002518.01.T01 MTR_2g019040 61.702 141 42 2 36 172 4 136 7.83e-49 173
MsG0180002518.01.T01 MTR_7g079160 42.578 256 92 6 518 728 163 408 1.50e-46 174
MsG0180002518.01.T01 MTR_7g078880 37.419 310 135 7 488 742 1 306 5.50e-46 169
MsG0180002518.01.T01 MTR_3g452170 35.178 253 127 2 4 252 120 339 5.76e-46 171
MsG0180002518.01.T01 MTR_7g077970 41.129 248 97 6 534 739 168 408 6.59e-44 164
MsG0180002518.01.T01 MTR_4g032565 34.767 279 110 7 145 384 9 254 3.86e-41 152
MsG0180002518.01.T01 MTR_1g052715 42.857 168 92 1 4 167 80 247 5.35e-41 154
MsG0180002518.01.T01 MTR_0242s0060 40.260 231 83 7 534 721 169 387 5.63e-41 156
MsG0180002518.01.T01 MTR_0242s0040 40.260 231 83 7 534 721 169 387 5.63e-41 156
MsG0180002518.01.T01 MTR_7g077910 43.083 253 86 10 525 732 80 319 6.21e-41 154
MsG0180002518.01.T01 MTR_4g032585 34.495 287 115 9 145 391 9 262 5.01e-40 149
MsG0180002518.01.T01 MTR_1g029650 38.168 262 102 7 526 746 155 397 2.45e-39 151
MsG0180002518.01.T01 MTR_7g077990 40.426 235 87 6 529 724 151 371 2.14e-38 148
MsG0180002518.01.T01 MTR_1g015730 40.316 253 88 9 534 746 159 388 1.55e-37 145
MsG0180002518.01.T01 MTR_7g077070 37.600 250 102 7 516 720 156 396 1.74e-36 143
MsG0180002518.01.T01 MTR_6g065510 35.599 309 101 11 495 722 21 312 2.57e-36 140
MsG0180002518.01.T01 MTR_7g445890 39.301 229 88 5 536 720 140 361 2.65e-36 141
MsG0180002518.01.T01 MTR_6g088385 35.314 303 118 8 484 721 9 298 9.93e-36 138
MsG0180002518.01.T01 MTR_1g492690 30.523 344 158 9 75 392 5 293 1.45e-35 139
MsG0180002518.01.T01 MTR_4g060433 38.679 212 84 6 173 384 9 174 2.10e-35 134
MsG0180002518.01.T01 MTR_6g016285 40.417 240 87 7 534 723 166 399 3.26e-35 140
MsG0180002518.01.T01 MTR_6g055210 38.722 266 93 9 512 723 152 401 2.02e-34 137
MsG0180002518.01.T01 MTR_5g019960 52.846 123 53 2 1 119 124 245 2.05e-34 132
MsG0180002518.01.T01 MTR_7g056503 40.789 228 80 6 534 723 169 379 1.63e-33 134
MsG0180002518.01.T01 MTR_4g030110 44.019 209 96 8 533 723 173 378 8.82e-33 131
MsG0180002518.01.T01 MTR_7g009265 38.938 226 89 8 536 720 85 302 1.33e-32 129
MsG0180002518.01.T01 MTR_7g055953 37.698 252 99 11 508 719 60 293 1.47e-32 129
MsG0180002518.01.T01 MTR_7g045450 44.079 152 74 1 2 153 118 258 1.52e-32 127
MsG0180002518.01.T01 MTR_6g073570 44.079 152 74 1 2 153 118 258 1.52e-32 127
MsG0180002518.01.T01 MTR_7g056173 40.000 235 81 8 536 723 27 248 1.94e-32 129
MsG0180002518.01.T01 MTR_5g056020 37.549 253 103 7 524 723 152 402 3.21e-32 132
MsG0180002518.01.T01 MTR_7g062060 38.057 247 97 8 516 723 157 386 3.51e-32 130
MsG0180002518.01.T01 MTR_3g080370 38.333 240 92 6 534 723 166 399 6.22e-32 130
MsG0180002518.01.T01 MTR_3g437520 37.759 241 98 6 534 734 183 411 6.30e-32 130
MsG0180002518.01.T01 MTR_3g007260 57.732 97 40 1 1 97 77 172 9.58e-32 122
MsG0180002518.01.T01 MTR_7g078960 37.555 229 104 7 524 720 33 254 1.21e-31 125
MsG0180002518.01.T01 MTR_2g010920 37.302 252 102 8 524 724 161 407 1.34e-31 129
MsG0180002518.01.T01 MTR_7g055830 38.528 231 90 7 536 723 117 338 2.51e-31 126
MsG0180002518.01.T01 MTR_1g442850 39.912 228 79 7 533 720 148 357 2.70e-31 127
MsG0180002518.01.T01 MTR_1g115520 43.949 157 44 2 197 339 2 128 3.47e-31 119
MsG0180002518.01.T01 MTR_8g066440 38.174 241 92 7 524 721 157 383 4.19e-31 127
MsG0180002518.01.T01 MTR_4g030830 37.391 230 96 6 534 723 153 374 4.46e-31 126
MsG0180002518.01.T01 MTR_6g081280 39.535 215 99 6 534 724 16 223 5.48e-31 122
MsG0180002518.01.T01 MTR_7g056003 35.200 250 104 8 524 727 155 392 6.17e-31 126
MsG0180002518.01.T01 MTR_7g055870 38.961 231 89 8 536 723 185 406 6.33e-31 127
MsG0180002518.01.T01 MTR_7g056290 36.245 229 90 8 536 720 182 398 8.71e-31 126
MsG0180002518.01.T01 MTR_0464s0020 36.910 233 92 6 534 720 183 406 2.03e-30 125
MsG0180002518.01.T01 MTR_1g015740 36.937 222 117 8 531 746 116 320 2.56e-30 122
MsG0180002518.01.T01 MTR_7g055930 38.095 231 91 7 536 723 185 406 2.62e-30 125
MsG0180002518.01.T01 MTR_2g010950 37.719 228 98 6 534 724 167 387 3.07e-30 124
MsG0180002518.01.T01 MTR_7g052670 36.555 238 84 6 536 720 180 403 4.86e-30 124
MsG0180002518.01.T01 MTR_6g017305 37.500 224 94 5 536 720 44 260 6.96e-30 120
MsG0180002518.01.T01 MTR_7g056390 35.498 231 93 8 534 720 176 394 1.03e-29 123
MsG0180002518.01.T01 MTR_4g034860 38.696 230 90 8 536 731 188 400 1.08e-29 122
MsG0180002518.01.T01 MTR_2g043410 35.776 232 92 7 536 722 178 397 2.35e-29 122
MsG0180002518.01.T01 MTR_7g066840 35.565 239 96 7 524 721 155 376 2.44e-29 121
MsG0180002518.01.T01 MTR_5g043160 36.402 239 90 9 530 720 212 436 2.45e-29 122
MsG0180002518.01.T01 MTR_7g078940 39.423 208 93 7 532 733 205 385 2.59e-29 121
MsG0180002518.01.T01 MTR_6g017280 37.104 221 90 6 536 720 159 366 2.92e-29 121
MsG0180002518.01.T01 MTR_7g061050 38.393 224 85 7 536 723 162 368 4.53e-29 120
MsG0180002518.01.T01 MTR_4g033495 38.356 219 85 8 536 720 184 386 1.07e-28 120
MsG0180002518.01.T01 MTR_2g010935 39.378 193 105 5 541 724 43 232 1.26e-28 115
MsG0180002518.01.T01 MTR_8g104590 37.297 185 69 5 200 384 20 157 1.76e-28 113
MsG0180002518.01.T01 MTR_3g072470 36.066 244 93 8 534 732 176 401 2.08e-28 119
MsG0180002518.01.T01 MTR_7g113500 36.626 243 107 8 523 724 128 364 2.38e-28 118
MsG0180002518.01.T01 MTR_1g016960 38.614 202 77 5 524 724 80 235 3.63e-28 114
MsG0180002518.01.T01 MTR_7g066850 36.250 240 100 7 524 720 153 382 4.33e-28 119
MsG0180002518.01.T01 MTR_4g129190 36.564 227 90 8 538 721 155 370 5.70e-28 117
MsG0180002518.01.T01 MTR_5g057125 31.410 312 151 7 95 392 12 274 6.04e-28 115
MsG0180002518.01.T01 MTR_3g464470 38.462 234 85 7 534 723 143 361 6.26e-28 117
MsG0180002518.01.T01 MTR_6g024030 51.456 103 46 1 24 122 60 162 7.36e-28 113
MsG0180002518.01.T01 MTR_3g464500 38.034 234 86 7 534 723 166 384 7.63e-28 117
MsG0180002518.01.T01 MTR_4g030980 36.910 233 96 6 533 723 186 409 1.23e-27 117
MsG0180002518.01.T01 MTR_4g019990 37.391 230 88 8 536 723 155 370 1.31e-27 116
MsG0180002518.01.T01 MTR_2g043400 34.468 235 96 6 534 722 176 398 1.84e-27 116
MsG0180002518.01.T01 MTR_6g086920 36.614 254 100 9 525 723 204 451 2.25e-27 117
MsG0180002518.01.T01 MTR_7g061090 37.391 230 95 7 530 723 174 390 2.30e-27 115
MsG0180002518.01.T01 MTR_6g017295 35.000 240 94 7 536 720 95 327 3.42e-27 117
MsG0180002518.01.T01 MTR_5g068040 37.097 248 98 7 521 724 130 363 4.03e-27 114
MsG0180002518.01.T01 MTR_7g062100 38.667 225 83 7 536 723 173 379 5.48e-27 114
MsG0180002518.01.T01 MTR_4g031020 36.910 233 96 6 533 723 186 409 6.63e-27 115
MsG0180002518.01.T01 MTR_0707s0020 35.918 245 96 8 525 721 192 423 7.79e-27 115
MsG0180002518.01.T01 MTR_7g056170 39.698 199 98 5 536 721 250 439 1.42e-26 114
MsG0180002518.01.T01 MTR_7g057270 34.286 245 115 6 515 723 161 395 2.49e-26 113
MsG0180002518.01.T01 MTR_7g066010 38.350 206 98 8 524 721 167 351 2.63e-26 112
MsG0180002518.01.T01 MTR_7g056737 37.209 215 82 6 542 722 175 370 3.03e-26 112
MsG0180002518.01.T01 MTR_7g070830 35.409 257 94 10 534 741 183 416 3.58e-26 112
MsG0180002518.01.T01 MTR_7g060940 37.603 242 87 8 524 723 155 374 9.05e-26 110
MsG0180002518.01.T01 MTR_7g050520 35.685 241 90 9 524 724 156 371 9.82e-26 110
MsG0180002518.01.T01 MTR_6g092560 33.688 282 116 13 498 723 111 377 1.03e-25 111
MsG0180002518.01.T01 MTR_7g056710 36.697 218 83 7 538 720 166 363 1.39e-25 110
MsG0180002518.01.T01 MTR_0649s0020 33.628 226 99 6 536 723 157 369 1.71e-25 110
MsG0180002518.01.T01 MTR_7g055977 33.453 278 126 10 492 723 99 363 2.22e-25 109
MsG0180002518.01.T01 MTR_7g061060 35.246 244 97 11 536 737 165 389 2.84e-25 109
MsG0180002518.01.T01 MTR_7g070880 35.178 253 100 9 534 741 183 416 3.96e-25 109
MsG0180002518.01.T01 MTR_7g050480 35.270 241 91 9 524 724 156 371 5.30e-25 108
MsG0180002518.01.T01 MTR_7g060960 40.179 224 69 11 536 723 154 348 1.83e-24 106
MsG0180002518.01.T01 MTR_4g129160 36.946 203 78 7 536 699 169 360 2.16e-24 106
MsG0180002518.01.T01 MTR_7g056717 36.986 219 85 6 538 722 171 370 2.31e-24 106
MsG0180002518.01.T01 MTR_2g461450 35.556 225 87 6 534 719 146 351 7.56e-24 104
MsG0180002518.01.T01 MTR_3g068135 41.791 134 36 1 123 256 39 130 1.08e-23 100
MsG0180002518.01.T01 MTR_7g055987 37.056 197 66 7 534 696 163 335 1.18e-23 103
MsG0180002518.01.T01 MTR_5g096710 33.475 236 106 7 524 723 160 380 1.32e-23 104
MsG0180002518.01.T01 MTR_2g010900 37.745 204 81 7 536 701 134 329 1.40e-23 104
MsG0180002518.01.T01 MTR_2g047878 32.618 233 80 7 526 723 155 345 1.46e-23 103
MsG0180002518.01.T01 MTR_0097s0030 33.613 238 93 9 524 721 145 357 1.65e-23 103
MsG0180002518.01.T01 MTR_2g047240 33.613 238 93 9 524 721 145 357 1.65e-23 103
MsG0180002518.01.T01 MTR_7g056570 37.788 217 83 8 538 720 167 365 1.75e-23 104
MsG0180002518.01.T01 MTR_2g047892 32.018 228 102 7 533 724 168 378 2.17e-23 103
MsG0180002518.01.T01 MTR_7g034310 36.937 222 78 8 536 722 17 211 2.25e-23 100
MsG0180002518.01.T01 MTR_7g028660 34.529 223 88 5 536 720 156 358 6.54e-23 102
MsG0180002518.01.T01 MTR_7g061010 36.842 247 91 11 533 739 166 387 8.69e-23 102
MsG0180002518.01.T01 MTR_7g070900 44.000 150 66 6 533 670 234 377 9.80e-23 102
MsG0180002518.01.T01 MTR_7g056820 32.110 218 99 5 536 719 152 354 1.21e-22 101
MsG0180002518.01.T01 MTR_2g437110 36.585 205 98 9 536 720 179 371 2.00e-22 102
MsG0180002518.01.T01 MTR_5g069760 33.628 226 82 7 536 721 153 350 2.09e-22 100
MsG0180002518.01.T01 MTR_7g091630 33.333 255 111 8 523 723 163 412 2.42e-22 101
MsG0180002518.01.T01 MTR_4g030090 35.169 236 91 10 536 723 160 381 2.57e-22 100
MsG0180002518.01.T01 MTR_1g071010 32.468 231 91 8 536 723 160 368 4.71e-22 99.8
MsG0180002518.01.T01 MTR_7g066100 33.202 253 93 10 525 723 144 374 4.99e-22 99.8
MsG0180002518.01.T01 MTR_4g024890 34.632 231 92 7 536 723 152 366 6.06e-22 99.4
MsG0180002518.01.T01 MTR_2g006360 34.783 230 80 8 534 728 154 348 7.76e-22 98.6
MsG0180002518.01.T01 MTR_7g061940 35.714 210 78 8 538 712 79 266 9.33e-22 96.3
MsG0180002518.01.T01 MTR_7g056200 31.317 281 119 10 509 723 91 363 1.07e-21 98.6
MsG0180002518.01.T01 MTR_2g047200 34.234 222 91 8 534 719 170 372 1.14e-21 98.6
MsG0180002518.01.T01 MTR_7g006360 35.821 201 86 7 524 720 96 257 1.35e-21 96.7
MsG0180002518.01.T01 MTR_4g020000 34.783 230 89 8 534 720 111 322 1.48e-21 97.8
MsG0180002518.01.T01 MTR_0128s0010 33.333 222 98 6 536 721 170 377 2.09e-21 97.8
MsG0180002518.01.T01 MTR_2g047895 32.314 229 89 8 534 723 91 292 3.48e-21 96.3
MsG0180002518.01.T01 MTR_0128s0070 32.099 243 108 8 534 740 176 397 3.58e-21 97.1
MsG0180002518.01.T01 MTR_8g064300 32.979 188 87 6 243 399 115 294 4.03e-21 95.5
MsG0180002518.01.T01 MTR_4g030760 35.185 216 99 7 534 723 211 411 5.98e-21 97.1
MsG0180002518.01.T01 MTR_7g066030 34.764 233 86 8 534 721 177 388 1.20e-20 95.5
MsG0180002518.01.T01 MTR_7g066060 35.242 227 89 8 536 720 178 388 1.92e-20 96.3
MsG0180002518.01.T01 MTR_7g021580 33.810 210 77 7 515 721 133 283 2.09e-20 93.2
MsG0180002518.01.T01 MTR_7g037670 35.096 208 103 8 524 727 137 316 4.78e-20 92.8
MsG0180002518.01.T01 MTR_2g450060 22.910 323 184 9 5 296 121 409 6.18e-20 95.1
MsG0180002518.01.T01 MTR_6g017270 35.602 191 85 7 536 719 159 318 1.10e-19 91.7
MsG0180002518.01.T01 MTR_1g112010 34.375 224 74 8 536 723 120 306 1.45e-19 91.3
MsG0180002518.01.T01 MTR_2g048560 23.249 357 213 9 23 352 140 462 1.93e-18 90.1
MsG0180002518.01.T01 MTR_7g066040 40.278 144 59 6 534 663 82 212 4.34e-18 85.1
MsG0180002518.01.T01 MTR_8g101940 35.047 214 104 8 536 723 145 349 4.49e-18 87.4
MsG0180002518.01.T01 MTR_7g091640 33.511 188 80 5 524 670 165 348 5.53e-18 87.0
MsG0180002518.01.T01 MTR_5g004860 24.113 282 167 7 4 273 116 362 6.50e-18 88.6
MsG0180002518.01.T01 MTR_7g066080 35.124 242 86 10 536 720 169 396 1.17e-17 87.0
MsG0180002518.01.T01 MTR_7g066000 31.140 228 101 7 532 720 170 380 1.18e-17 86.7
MsG0180002518.01.T01 MTR_1g110330 60.000 75 11 1 98 172 121 176 1.78e-17 82.4
MsG0180002518.01.T01 MTR_6g042600 29.167 288 142 7 485 720 25 302 1.82e-17 85.9
MsG0180002518.01.T01 MTR_5g041170 23.867 331 181 9 2 296 17 312 2.57e-17 85.9
MsG0180002518.01.T01 MTR_0003s0290 22.549 306 192 7 3 296 83 355 2.67e-17 86.3
MsG0180002518.01.T01 MTR_5g093790 30.275 218 104 8 213 399 168 368 5.14e-17 84.3
MsG0180002518.01.T01 MTR_7g091610 35.185 162 66 4 596 723 72 228 6.42e-17 81.6
MsG0180002518.01.T01 MTR_7g056260 39.412 170 51 5 536 666 161 317 1.47e-16 82.0
MsG0180002518.01.T01 MTR_8g030630 34.807 181 72 5 578 723 72 241 2.05e-16 83.2
MsG0180002518.01.T01 MTR_8g030630 34.940 166 92 6 563 719 282 440 1.55e-15 80.5
MsG0180002518.01.T01 MTR_7g070937 43.411 129 59 5 534 656 10 130 3.39e-16 77.4
MsG0180002518.01.T01 MTR_0354s0030 54.054 74 32 1 649 720 1 74 3.97e-16 75.1
MsG0180002518.01.T01 MTR_3g108500 44.444 81 32 1 250 317 20 100 6.03e-16 79.3
MsG0180002518.01.T01 MTR_3g046650 30.058 173 73 3 123 295 78 202 7.36e-16 78.6
MsG0180002518.01.T01 MTR_7g056793 30.412 194 107 8 533 723 45 213 1.16e-15 77.4
MsG0180002518.01.T01 MTR_7g089830 38.462 143 53 5 593 710 6 138 1.77e-15 74.7
MsG0180002518.01.T01 MTR_4g037465 30.924 249 105 11 515 719 147 372 1.79e-15 79.7
MsG0180002518.01.T01 MTR_7g096440 33.684 95 63 0 2 96 71 165 2.26e-15 77.4
MsG0180002518.01.T01 MTR_3g055660 20.968 434 268 14 4 399 145 541 6.38e-15 79.0
MsG0180002518.01.T01 MTR_7g061100 42.609 115 53 4 536 650 126 227 1.05e-14 76.6
MsG0180002518.01.T01 MTR_4g014890 22.067 358 208 11 4 330 145 462 1.52e-14 77.8
MsG0180002518.01.T01 MTR_6g059860 21.689 438 257 14 4 399 139 532 3.69e-14 76.6
MsG0180002518.01.T01 MTR_6g048150 47.500 80 32 2 646 720 13 87 4.00e-14 70.5
MsG0180002518.01.T01 MTR_6g055250 26.316 247 128 7 2 233 75 282 4.44e-14 75.5
MsG0180002518.01.T01 MTR_1g043690 25.600 250 133 9 4 240 123 332 1.43e-13 75.1
MsG0180002518.01.T01 MTR_1g046600 56.923 65 28 0 648 712 242 306 4.05e-13 71.6
MsG0180002518.01.T01 MTR_7g058630 31.847 157 61 3 601 723 17 161 5.97e-13 68.6
MsG0180002518.01.T01 MTR_7g030040 30.244 205 95 6 518 720 157 315 2.29e-12 69.7
MsG0180002518.01.T01 MTR_5g053590 27.174 276 170 8 4 272 117 368 2.10e-11 67.8
MsG0180002518.01.T01 MTR_6g465570 52.830 53 25 0 4 56 116 168 4.52e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002518.01.T01 AT1G52950 24.723 271 167 7 9 270 123 365 2.52e-13 73.9

Find 169 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTCGCCGGTGTTCTTTAT+TGG 0.115271 1:+39691921 MsG0180002518.01.T01:CDS
CCGTCGCCGGTGTTCTTTAT+TGG 0.115271 1:+39692007 MsG0180002518.01.T01:CDS
ATCTGAACATTTGAATTATT+TGG 0.126192 1:-39690569 None:intergenic
CATGCCATTGTTTCTTTCTA+AGG 0.153135 1:+39693252 MsG0180002518.01.T01:CDS
TACGGTTTCGTCTTCAATTT+TGG 0.200627 1:+39692687 MsG0180002518.01.T01:CDS
ACCAATTGCATTGCTCTCTT+TGG 0.207867 1:+39688920 MsG0180002518.01.T01:CDS
GTTATTGTTTCACTTGATTT+GGG 0.215339 1:+39692981 MsG0180002518.01.T01:CDS
CCAATTGCATTGCTCTCTTT+GGG 0.229397 1:+39688921 MsG0180002518.01.T01:CDS
TGTTATTGTTTCACTTGATT+TGG 0.231569 1:+39692980 MsG0180002518.01.T01:CDS
GGAGTTGCTAATGCCTTTAA+TGG 0.246567 1:+39689142 MsG0180002518.01.T01:intron
CATCAGCTTAGTCCCATTAA+AGG 0.249023 1:-39689155 None:intergenic
ATCATCAGATGCCTTCTTTA+CGG 0.268383 1:-39690351 None:intergenic
AAATTTGTGCTTTCTTGTTC+GGG 0.268974 1:-39696185 None:intergenic
AAAATTTGTGCTTTCTTGTT+CGG 0.273164 1:-39696186 None:intergenic
GGGAAGCAATTATCTATAAT+TGG 0.275107 1:+39693311 MsG0180002518.01.T01:CDS
TCAATTAAAATATCACTTTA+CGG 0.277881 1:+39693201 MsG0180002518.01.T01:CDS
TGCAAGACACGCATGTATTT+AGG 0.278275 1:+39689021 MsG0180002518.01.T01:CDS
TTGGCTTTATGGATTCTTAT+TGG 0.282160 1:+39695983 MsG0180002518.01.T01:CDS
ATATGGCAGATGAAGGAATT+TGG 0.289311 1:+39693130 MsG0180002518.01.T01:intron
GGACCTCTTAGCACCTGTTT+TGG 0.300072 1:-39690737 None:intergenic
TGGCTTTATGGATTCTTATT+GGG 0.324593 1:+39695984 MsG0180002518.01.T01:CDS
TAATTGAAAGAGGTGATATA+AGG 0.328150 1:+39688737 MsG0180002518.01.T01:CDS
GGCATCCCCGTTGTAGTTAT+AGG 0.330548 1:-39692124 None:intergenic
TACGTAATTTCAGATGTTAT+TGG 0.335367 1:+39688709 MsG0180002518.01.T01:intron
ACTATATGTGAGATCGAAAC+TGG 0.342217 1:+39689813 MsG0180002518.01.T01:CDS
GCATCCCCGTTGTAGTTATA+GGG 0.347474 1:-39692123 None:intergenic
GTCATGTACGCAGCGACTTC+AGG 0.351625 1:-39689193 None:intergenic
TGAAATCTGGCTGACACTTC+GGG 0.360423 1:-39689586 None:intergenic
GAGAAATATTGAAAGTTTCC+CGG 0.361687 1:+39692812 MsG0180002518.01.T01:CDS
AATCACTAGGTATAGTGATA+TGG 0.369434 1:+39692929 MsG0180002518.01.T01:CDS
TTCTCACGGAGAGGAATAAC+CGG 0.374540 1:-39692831 None:intergenic
TCAGTTTAGCTGATAATGAT+TGG 0.382785 1:+39692790 MsG0180002518.01.T01:CDS
GGCAGTCCTGTTGTAGTCAT+AGG 0.383318 1:-39691951 None:intergenic
ACAATCCCTATAACTACAAC+GGG 0.383669 1:+39692118 MsG0180002518.01.T01:CDS
GGCAGTCCCGTTGTAGTCAT+AGG 0.383786 1:-39692037 None:intergenic
CACAGAGTCAATGCTATTAG+AGG 0.396125 1:-39690758 None:intergenic
ATGCACCCAGTGTGCTTCAT+TGG 0.403027 1:+39689857 MsG0180002518.01.T01:CDS
CAACGGGACTGCCTTGGTAT+TGG 0.403778 1:+39692047 MsG0180002518.01.T01:CDS
CGGAGCTGTTCGTTGAAATC+TGG 0.408812 1:-39689599 None:intergenic
TTGAAATCTGGCTGACACTT+CGG 0.410210 1:-39689587 None:intergenic
CAACGGGGATGCCTTGGTAT+TGG 0.411285 1:+39692134 MsG0180002518.01.T01:CDS
AATTTGGCGTTGACGAGTCT+TGG 0.411930 1:+39693146 MsG0180002518.01.T01:CDS
GACACACCAACCACCAAAAC+AGG 0.418702 1:+39690724 MsG0180002518.01.T01:CDS
GGTTCATTTATCTTTCCAAC+AGG 0.427901 1:-39696214 None:intergenic
GAAGAGAGAATTTCATTGAA+TGG 0.432380 1:-39688557 None:intergenic
GAGTTGCTAATGCCTTTAAT+GGG 0.439194 1:+39689143 MsG0180002518.01.T01:intron
TATGTTTAAGTATAATTTGA+AGG 0.442348 1:+39690394 MsG0180002518.01.T01:CDS
TCATGCTTTCAATTGTCATT+CGG 0.442768 1:-39689653 None:intergenic
ACGGATCCTGAGAACCATCT+AGG 0.442868 1:+39693220 MsG0180002518.01.T01:CDS
CTGAGACATTCAATCAATAT+CGG 0.451999 1:+39693006 MsG0180002518.01.T01:CDS
ATATCACTATACCTAGTGAT+TGG 0.452596 1:-39692927 None:intergenic
AACTGTCGAGGAAGTGTCTA+CGG 0.454569 1:+39688580 MsG0180002518.01.T01:CDS
ACAATCCCTATGACTACAAC+GGG 0.457767 1:+39692031 MsG0180002518.01.T01:CDS
GCATGAGATAACAACCTAGA+TGG 0.461909 1:-39693234 None:intergenic
ACATCGAACCCAGCATGAAT+AGG 0.462327 1:-39696035 None:intergenic
CCATTGTTTCTTTCTAAGGA+TGG 0.464632 1:+39693256 MsG0180002518.01.T01:CDS
CCTCTCCGTGAGAATTATCA+AGG 0.466147 1:+39692840 MsG0180002518.01.T01:CDS
TCAATCAATATCGGTTGCCT+CGG 0.472622 1:+39693015 MsG0180002518.01.T01:CDS
TTTACAAATCTGTCAAGGTT+CGG 0.473074 1:+39689782 MsG0180002518.01.T01:CDS
CCCAAAGAGAGCAATGCAAT+TGG 0.474358 1:-39688921 None:intergenic
ACAATCCCTATGACTACAAC+AGG 0.476570 1:+39691945 MsG0180002518.01.T01:CDS
CAATCAATATCGGTTGCCTC+GGG 0.485582 1:+39693016 MsG0180002518.01.T01:CDS
CAAATGCCGCCTATTCATGC+TGG 0.487750 1:+39696026 MsG0180002518.01.T01:CDS
ATTGAGGAGTAATAGAGAAA+GGG 0.488724 1:+39693291 MsG0180002518.01.T01:CDS
AATTGAAAGAGGTGATATAA+GGG 0.489125 1:+39688738 MsG0180002518.01.T01:CDS
TATCACTATACCTAGTGATT+GGG 0.491291 1:-39692926 None:intergenic
CTGCATGAGTCCTCAACCTC+TGG 0.491342 1:-39690685 None:intergenic
TAACAACCTAGATGGTTCTC+AGG 0.492128 1:-39693226 None:intergenic
AAAAGGATGGAAGGAAAAGC+AGG 0.493666 1:+39688767 MsG0180002518.01.T01:CDS
GAAGTCGCTGCGTACATGAC+AGG 0.494351 1:+39689196 MsG0180002518.01.T01:CDS
GCTTTCAATTGTCATTCGGT+TGG 0.496345 1:-39689649 None:intergenic
GATCGTAGAGTGGAGCGAAC+AGG 0.496854 1:+39693337 MsG0180002518.01.T01:CDS
AACTGAAATATCAATATAGT+AGG 0.504939 1:-39688997 None:intergenic
TAACTACAACGGGGATGCCT+TGG 0.505937 1:+39692128 MsG0180002518.01.T01:CDS
ATCAGCACATTAAAATCAGC+AGG 0.507382 1:-39690260 None:intergenic
TATTGAGGAGTAATAGAGAA+AGG 0.508829 1:+39693290 MsG0180002518.01.T01:CDS
CATGTCTACGACTCCGTCGC+CGG 0.509210 1:+39692081 MsG0180002518.01.T01:CDS
TTTGGTTGTGATAATTCCAC+TGG 0.512118 1:+39692705 MsG0180002518.01.T01:CDS
TTATTGTTTCACTTGATTTG+GGG 0.519198 1:+39692982 MsG0180002518.01.T01:CDS
CTCTAATAGCATTGACTCTG+TGG 0.521605 1:+39690759 MsG0180002518.01.T01:CDS
AGATCGAAACTGGGGTTGAT+TGG 0.522728 1:+39689823 MsG0180002518.01.T01:CDS
TTCAAGGTTGAGGTTGGTGA+AGG 0.523411 1:+39690299 MsG0180002518.01.T01:CDS
TGATATAAGGGAAACTGAAA+AGG 0.524272 1:+39688750 MsG0180002518.01.T01:CDS
AGTTTCGATCTCACATATAG+TGG 0.527956 1:-39689811 None:intergenic
TGACTACAACGGGACTGCCT+TGG 0.529062 1:+39692041 MsG0180002518.01.T01:CDS
GCAGGATGTACCAGAGGTTG+AGG 0.530069 1:+39690675 MsG0180002518.01.T01:intron
ATAAGGGAAACTGAAAAGGA+TGG 0.532230 1:+39688754 MsG0180002518.01.T01:CDS
GATATGATTAGTGACGCTCT+TGG 0.534150 1:+39696120 MsG0180002518.01.T01:intron
ATTGGTCATGTAATTGAAAG+AGG 0.535259 1:+39688727 MsG0180002518.01.T01:CDS
GTTGTTGAGCTTAGTGTGGA+TGG 0.536955 1:+39690539 MsG0180002518.01.T01:CDS
TTATTGGGTGTGACTAATCA+TGG 0.537682 1:+39695999 MsG0180002518.01.T01:CDS
CAATTGCATTGCTCTCTTTG+GGG 0.538249 1:+39688922 MsG0180002518.01.T01:CDS
GGCTGTTGATGATATGAAGC+TGG 0.541513 1:+39690780 MsG0180002518.01.T01:CDS
GCAGTCCTGTTGTAGTCATA+GGG 0.543089 1:-39691950 None:intergenic
TCGGAATTATGCCGTAAAGA+AGG 0.543424 1:+39690340 MsG0180002518.01.T01:CDS
CATGTCTACGACTCCGTCGC+CGG 0.544645 1:+39691908 MsG0180002518.01.T01:CDS
CATGTCTACGACTCCGTCGC+CGG 0.544645 1:+39691994 MsG0180002518.01.T01:CDS
GAAATGTCGTAAAGAAGTAT+CGG 0.544878 1:+39690321 MsG0180002518.01.T01:CDS
CATAAAACTAGTATTGATGA+TGG 0.544893 1:+39693370 MsG0180002518.01.T01:CDS
CAAATCCTTGATAATTCTCA+CGG 0.547731 1:-39692845 None:intergenic
TGACTACAACAGGACTGCCT+TGG 0.554833 1:+39691955 MsG0180002518.01.T01:CDS
TTATGATGAGCCCGTTGAAG+AGG 0.556030 1:+39696155 MsG0180002518.01.T01:CDS
CGCAAGTGTAAAACTTGCAA+GGG 0.557114 1:+39689909 MsG0180002518.01.T01:CDS
TCAACAACAGATCCATCGTC+GGG 0.557450 1:-39690524 None:intergenic
GCAGTCCCGTTGTAGTCATA+GGG 0.559842 1:-39692036 None:intergenic
AAATAATTCAAATGTTCAGA+TGG 0.560337 1:+39690571 MsG0180002518.01.T01:CDS
CCAATAAAGAACACCGGCGA+CGG 0.561393 1:-39691921 None:intergenic
CCAATAAAGAACACCGGCGA+CGG 0.561393 1:-39692007 None:intergenic
TCGCAAGTGTAAAACTTGCA+AGG 0.564821 1:+39689908 MsG0180002518.01.T01:CDS
CTATATGTGAGATCGAAACT+GGG 0.565040 1:+39689814 MsG0180002518.01.T01:CDS
CGGTGGCCAATGAAGCACAC+TGG 0.566637 1:-39689863 None:intergenic
CCACCAAAACAGGTGCTAAG+AGG 0.573345 1:+39690734 MsG0180002518.01.T01:CDS
CATGTCTATTACTCCGTCGC+CGG 0.574075 1:+39692168 MsG0180002518.01.T01:CDS
ACTGTCGAGGAAGTGTCTAC+GGG 0.577481 1:+39688581 MsG0180002518.01.T01:CDS
TAGGTATAGTGATATGGCTG+TGG 0.581203 1:+39692935 MsG0180002518.01.T01:CDS
GGGAAACTGAAAAGGATGGA+AGG 0.581802 1:+39688758 MsG0180002518.01.T01:CDS
GTATAGTGATATGGCTGTGG+AGG 0.582340 1:+39692938 MsG0180002518.01.T01:CDS
GAGCACTCCGTTGTCAGCGG+TGG 0.583476 1:-39689880 None:intergenic
GGCTGATTGTTTCAATACCA+AGG 0.586751 1:-39691972 None:intergenic
AAATGCCGCCTATTCATGCT+GGG 0.587080 1:+39696027 MsG0180002518.01.T01:CDS
AGCAATTATCTATAATTGGA+GGG 0.588833 1:+39693315 MsG0180002518.01.T01:CDS
CTCAACAACAGATCCATCGT+CGG 0.590122 1:-39690525 None:intergenic
GGTGGCCAATGAAGCACACT+GGG 0.590767 1:-39689862 None:intergenic
ATCTGTTGTTGAGCTTAGTG+TGG 0.594833 1:+39690535 MsG0180002518.01.T01:CDS
TAGTAGGTGTGTGGTTGTCA+TGG 0.596523 1:-39688981 None:intergenic
AAGCAATTATCTATAATTGG+AGG 0.599315 1:+39693314 MsG0180002518.01.T01:CDS
AATTCTCTCTTCAACTGTCG+AGG 0.602150 1:+39688568 MsG0180002518.01.T01:CDS
AACAATCCCTATAACTACAA+CGG 0.604090 1:+39692117 MsG0180002518.01.T01:CDS
CTTGCAAGGGTGCAGTCCCA+AGG 0.605354 1:+39689922 MsG0180002518.01.T01:CDS
AAATATTTACAAATCTGTCA+AGG 0.605644 1:+39689777 MsG0180002518.01.T01:CDS
AAGTCGCTGCGTACATGACA+GGG 0.606137 1:+39689197 MsG0180002518.01.T01:CDS
GTCATCGTGATGGACGACAC+AGG 0.607107 1:+39690035 MsG0180002518.01.T01:CDS
TCATTGGCCACCGCTGACAA+CGG 0.610894 1:+39689873 MsG0180002518.01.T01:CDS
ATAATGACGTCCCAATCACT+AGG 0.612975 1:+39692916 MsG0180002518.01.T01:CDS
AATTTGTGCTTTCTTGTTCG+GGG 0.613817 1:-39696184 None:intergenic
CGGCGACGGAGTCGTAGACA+TGG 0.615592 1:-39691907 None:intergenic
CGGCGACGGAGTCGTAGACA+TGG 0.615592 1:-39691993 None:intergenic
CGGCGACGGAGTCGTAGACA+TGG 0.615592 1:-39692080 None:intergenic
TCACAGAACAACACCGGCGA+CGG 0.616097 1:-39692181 None:intergenic
CAAGCTGCATGTCATCGTGA+TGG 0.617455 1:+39690025 MsG0180002518.01.T01:CDS
AACAATCCCTATGACTACAA+CGG 0.624525 1:+39692030 MsG0180002518.01.T01:CDS
ATTTCACAGAAAGTAATGAA+AGG 0.624692 1:-39692222 None:intergenic
GCTGATTGTTTCCAATACCA+AGG 0.631040 1:-39692145 None:intergenic
GCAGATTGTTTCCAATACCA+AGG 0.631986 1:-39692058 None:intergenic
TCATCGTGATGGACGACACA+GGG 0.632753 1:+39690036 MsG0180002518.01.T01:CDS
CCATCCTTAGAAAGAAACAA+TGG 0.636498 1:-39693256 None:intergenic
ACGTGATAGAAACCCGACGA+TGG 0.636755 1:+39690512 MsG0180002518.01.T01:intron
CATGATTGAGTCAACTGAGG+TGG 0.638521 1:+39689671 MsG0180002518.01.T01:CDS
TCTCACGGAGAGGAATAACC+GGG 0.641049 1:-39692830 None:intergenic
CCTTGATAATTCTCACGGAG+AGG 0.645332 1:-39692840 None:intergenic
TAATTGGAGGGATCGTAGAG+TGG 0.653332 1:+39693327 MsG0180002518.01.T01:CDS
ATGGTGATACACTCATATTG+AGG 0.664814 1:+39693275 MsG0180002518.01.T01:CDS
ATTTGTGCTTTCTTGTTCGG+GGG 0.669094 1:-39696183 None:intergenic
ATGTCTGCAGGATGTACCAG+AGG 0.670047 1:+39690669 MsG0180002518.01.T01:intron
CAAGTCATCTGATAAAGACG+CGG 0.674931 1:-39689619 None:intergenic
CGGCGACGGAGTAATAGACA+TGG 0.675365 1:-39692167 None:intergenic
AGATCATCACAGAACAACAC+CGG 0.677283 1:-39692187 None:intergenic
TCGAACCCAGCATGAATAGG+CGG 0.679204 1:-39696032 None:intergenic
ACAGAGCACTCCGTTGTCAG+CGG 0.680943 1:-39689883 None:intergenic
AAAGGATGGAAGGAAAAGCA+GGG 0.682942 1:+39688768 MsG0180002518.01.T01:CDS
ATATGAAGCTGGCCAGACGT+CGG 0.684148 1:+39690791 MsG0180002518.01.T01:CDS
AACCACTTTAAAAGTGCCAG+TGG 0.684438 1:-39692721 None:intergenic
ATTGTTCCAATAAAGAACAC+CGG 0.689387 1:-39691927 None:intergenic
ATTGTTCCAATAAAGAACAC+CGG 0.689387 1:-39692013 None:intergenic
TATATGTGAGATCGAAACTG+GGG 0.729438 1:+39689815 MsG0180002518.01.T01:CDS
GTAATGAAAGGATCTCAGTG+AGG 0.740713 1:-39692210 None:intergenic
ATATCAATATAGTAGGTGTG+TGG 0.746817 1:-39688990 None:intergenic
AAGCATGATTGAGTCAACTG+AGG 0.787148 1:+39689668 MsG0180002518.01.T01:CDS
CAATCCCTATAACTACAACG+GGG 0.790247 1:+39692119 MsG0180002518.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACATATAAAAATGTAAA+TGG - Chr1:39689226-39689245 None:intergenic 10.0%
!! ATTGTTCAATTATTATTAAT+AGG + Chr1:39689455-39689474 MsG0180002518.01.T01:intron 10.0%
!! TTAATTATAAAAATTGTTGT+TGG + Chr1:39695518-39695537 MsG0180002518.01.T01:intron 10.0%
!!! AGTTTATACTTTTTTAATTT+AGG - Chr1:39691701-39691720 None:intergenic 10.0%
!!! TAATTATAAAAATTGTTGTT+GGG + Chr1:39695519-39695538 MsG0180002518.01.T01:intron 10.0%
!! AATGAATAAATTTATTTAGG+TGG - Chr1:39691047-39691066 None:intergenic 15.0%
!! ACCTAAATAAATTTATTCAT+TGG + Chr1:39691046-39691065 MsG0180002518.01.T01:intron 15.0%
!! AGATACATAAATTAACTATT+TGG - Chr1:39694502-39694521 None:intergenic 15.0%
!! ATCAAACATTTAAAAAATGT+TGG + Chr1:39695964-39695983 MsG0180002518.01.T01:CDS 15.0%
!! CTAAATTTCAATAGATTTAA+GGG - Chr1:39695097-39695116 None:intergenic 15.0%
!! GTAATAATTAATTCTTTCAA+CGG - Chr1:39694891-39694910 None:intergenic 15.0%
!! TAAAGAATATCATATACTTA+AGG - Chr1:39693623-39693642 None:intergenic 15.0%
!! TATAAGTATAAGAAAAACAA+AGG - Chr1:39693093-39693112 None:intergenic 15.0%
!! TATATAATTGTATAAATGTG+TGG + Chr1:39690154-39690173 MsG0180002518.01.T01:intron 15.0%
!! TATGTTTAAGTATAATTTGA+AGG + Chr1:39690394-39690413 MsG0180002518.01.T01:CDS 15.0%
!! TATTAGTAATTAAAATGTTG+TGG + Chr1:39695463-39695482 MsG0180002518.01.T01:intron 15.0%
!! TCAATTAAAATATCACTTTA+CGG + Chr1:39693201-39693220 MsG0180002518.01.T01:CDS 15.0%
!! TGAAAGAATTAATTATTACA+CGG + Chr1:39694892-39694911 MsG0180002518.01.T01:intron 15.0%
!!! AACGAAATTTGATATTTTAT+AGG + Chr1:39691503-39691522 MsG0180002518.01.T01:intron 15.0%
!!! AACTAAAAGTACTTTATTTT+TGG + Chr1:39693393-39693412 MsG0180002518.01.T01:CDS 15.0%
!!! ACGAAATTTGATATTTTATA+GGG + Chr1:39691504-39691523 MsG0180002518.01.T01:intron 15.0%
!!! ATAAATTTTTTGATAGATCT+TGG - Chr1:39691473-39691492 None:intergenic 15.0%
!!! ATATTTGTAACAAAATTTTG+TGG - Chr1:39694061-39694080 None:intergenic 15.0%
!!! CATTTTTCATTCTAATAAAA+GGG - Chr1:39689551-39689570 None:intergenic 15.0%
!!! GAAATTTTTAGATGTATTTT+TGG + Chr1:39689707-39689726 MsG0180002518.01.T01:CDS 15.0%
!!! TATTGAATTTTTGAAAAATG+AGG + Chr1:39689112-39689131 MsG0180002518.01.T01:intron 15.0%
!!! TTTGTTTTTATAGTAACTTT+AGG - Chr1:39691776-39691795 None:intergenic 15.0%
!!! TTTTTAATTCTTCAAATGTA+AGG + Chr1:39695305-39695324 MsG0180002518.01.T01:intron 15.0%
!! AAATAACCAAAATGTATGTT+AGG - Chr1:39694348-39694367 None:intergenic 20.0%
!! AAATAATTCAAATGTTCAGA+TGG + Chr1:39690571-39690590 MsG0180002518.01.T01:CDS 20.0%
!! AAATATTTACAAATCTGTCA+AGG + Chr1:39689777-39689796 MsG0180002518.01.T01:CDS 20.0%
!! AACTGAAATATCAATATAGT+AGG - Chr1:39689000-39689019 None:intergenic 20.0%
!! AATAAATTTCGTACATTTAG+AGG - Chr1:39691124-39691143 None:intergenic 20.0%
!! ACCAAATTGTAAAAAACAAA+AGG - Chr1:39690962-39690981 None:intergenic 20.0%
!! AGGAAAATATCTCAAAAATT+GGG + Chr1:39692649-39692668 MsG0180002518.01.T01:intron 20.0%
!! ATCAAAAAGAACAAAATTAG+TGG - Chr1:39690063-39690082 None:intergenic 20.0%
!! ATCTGAACATTTGAATTATT+TGG - Chr1:39690572-39690591 None:intergenic 20.0%
!! GAAATTTCTATGGATATATT+TGG - Chr1:39692403-39692422 None:intergenic 20.0%
!! GATATAGTTGATTATTTGAT+AGG + Chr1:39690000-39690019 MsG0180002518.01.T01:intron 20.0%
!! GATCTATCAAAAAATTTATG+AGG + Chr1:39691474-39691493 MsG0180002518.01.T01:intron 20.0%
!! GCCAATGAATAAATTTATTT+AGG - Chr1:39691050-39691069 None:intergenic 20.0%
!! GCTAAATTTCAATAGATTTA+AGG - Chr1:39695098-39695117 None:intergenic 20.0%
!! TAGGAAAATATCTCAAAAAT+TGG + Chr1:39692648-39692667 MsG0180002518.01.T01:intron 20.0%
!! TAGTGAGATTATAAATAACT+AGG - Chr1:39695256-39695275 None:intergenic 20.0%
!! TATTACCAAAATATCAATTC+AGG - Chr1:39688884-39688903 None:intergenic 20.0%
!! TTATAGAATAATGCACATAA+AGG + Chr1:39690450-39690469 MsG0180002518.01.T01:intron 20.0%
!! TTTCAATCAAAAACTATGTT+TGG - Chr1:39693757-39693776 None:intergenic 20.0%
!!! AAGTACTTTATTTTTGGAAA+TGG + Chr1:39693399-39693418 MsG0180002518.01.T01:CDS 20.0%
!!! ACATTTTATTATTTTTGAGC+AGG + Chr1:39690217-39690236 MsG0180002518.01.T01:intron 20.0%
!!! ACCTTTTGTTTTTTACAATT+TGG + Chr1:39690958-39690977 MsG0180002518.01.T01:intron 20.0%
!!! AGAATAAAGACAAGTTTTTT+TGG + Chr1:39689246-39689265 MsG0180002518.01.T01:intron 20.0%
!!! AGATGACCAATTTTATTATA+TGG + Chr1:39693113-39693132 MsG0180002518.01.T01:intron 20.0%
!!! ATTGTGTGAATATTTGTTTT+TGG + Chr1:39693533-39693552 MsG0180002518.01.T01:intron 20.0%
!!! ATTTCTAAAAGAATTTGTGT+TGG + Chr1:39695350-39695369 MsG0180002518.01.T01:intron 20.0%
!!! ATTTTTCTTCTTGATGAAAA+TGG - Chr1:39695068-39695087 None:intergenic 20.0%
!!! CATTTTATTATTTTTGAGCA+GGG + Chr1:39690218-39690237 MsG0180002518.01.T01:intron 20.0%
!!! GCATTTTTCATTCTAATAAA+AGG - Chr1:39689552-39689571 None:intergenic 20.0%
!!! GTTCAATATTTTTATGCAAA+AGG + Chr1:39689749-39689768 MsG0180002518.01.T01:CDS 20.0%
!!! TACGTGCTAATTTTTTTTAT+AGG + Chr1:39691445-39691464 MsG0180002518.01.T01:intron 20.0%
!!! TTAATTCCTAACATACATTT+TGG + Chr1:39694339-39694358 MsG0180002518.01.T01:intron 20.0%
!!! TTCTTAATGACACTTTTAAT+TGG + Chr1:39692883-39692902 MsG0180002518.01.T01:CDS 20.0%
!!! TTTAAAAAATGTTGGCTTTA+TGG + Chr1:39695972-39695991 MsG0180002518.01.T01:CDS 20.0%
!!! TTTATTTTTAGATCTACCTT+CGG + Chr1:39691138-39691157 MsG0180002518.01.T01:intron 20.0%
!!! TTTTTGAGATATTTTCCTAA+TGG - Chr1:39692647-39692666 None:intergenic 20.0%
! AAAAACAGAACAATTGATCT+TGG - Chr1:39694441-39694460 None:intergenic 25.0%
! AAAATTTGTGCTTTCTTGTT+CGG - Chr1:39696189-39696208 None:intergenic 25.0%
! AACTAGATGAAAATGTAGTA+TGG - Chr1:39694993-39695012 None:intergenic 25.0%
! AACTTTATGATGAATATGCA+TGG + Chr1:39695642-39695661 MsG0180002518.01.T01:intron 25.0%
! AAGCAATTATCTATAATTGG+AGG + Chr1:39693314-39693333 MsG0180002518.01.T01:CDS 25.0%
! AATATCAATTCAGGAACATA+AGG - Chr1:39688875-39688894 None:intergenic 25.0%
! AATCAATTTCAGCATGATAA+TGG - Chr1:39692425-39692444 None:intergenic 25.0%
! AATTGAAAGAGGTGATATAA+GGG + Chr1:39688738-39688757 MsG0180002518.01.T01:CDS 25.0%
! ACATAAATTAACTATTTGGC+AGG - Chr1:39694498-39694517 None:intergenic 25.0%
! AGATGGAATTTCACAAAAAA+GGG - Chr1:39692301-39692320 None:intergenic 25.0%
! AGCAATTATCTATAATTGGA+GGG + Chr1:39693315-39693334 MsG0180002518.01.T01:CDS 25.0%
! AGGAATTAAAAATATCGAGA+CGG - Chr1:39694328-39694347 None:intergenic 25.0%
! ATAAATTTATTTAGGTGGAC+TGG - Chr1:39691042-39691061 None:intergenic 25.0%
! ATCACGTATACATCAATAAA+GGG - Chr1:39690499-39690518 None:intergenic 25.0%
! ATTACAATCAACAATTCGTA+AGG - Chr1:39694243-39694262 None:intergenic 25.0%
! ATTAGAATTTGTGGAAAACA+TGG - Chr1:39693866-39693885 None:intergenic 25.0%
! ATTTCACAGAAAGTAATGAA+AGG - Chr1:39692225-39692244 None:intergenic 25.0%
! CAAATGTATGAAATTCCTAA+AGG - Chr1:39688668-39688687 None:intergenic 25.0%
! CAATTTGATCAATTGTGTTA+CGG - Chr1:39690639-39690658 None:intergenic 25.0%
! CATCTGCCATATAATAAAAT+TGG - Chr1:39693122-39693141 None:intergenic 25.0%
! CCACAAATTCTAATATCTAA+CGG + Chr1:39693872-39693891 MsG0180002518.01.T01:intron 25.0%
! CTATACATACACAAGATAAT+CGG - Chr1:39694211-39694230 None:intergenic 25.0%
! CTTGTTTATCCATCAATAAA+AGG - Chr1:39691672-39691691 None:intergenic 25.0%
! GTAAAACAAGATATAGGATA+TGG - Chr1:39692459-39692478 None:intergenic 25.0%
! GTAGAACATAACTGATATTA+CGG + Chr1:39690416-39690435 MsG0180002518.01.T01:intron 25.0%
! GTTATGTTATTATAGCCAAA+AGG + Chr1:39693557-39693576 MsG0180002518.01.T01:intron 25.0%
! GTTATTGTTTCACTTGATTT+GGG + Chr1:39692981-39693000 MsG0180002518.01.T01:CDS 25.0%
! TAATTGAAAGAGGTGATATA+AGG + Chr1:39688737-39688756 MsG0180002518.01.T01:CDS 25.0%
! TACGTAATTTCAGATGTTAT+TGG + Chr1:39688709-39688728 MsG0180002518.01.T01:intron 25.0%
! TATCACGTATACATCAATAA+AGG - Chr1:39690500-39690519 None:intergenic 25.0%
! TATCGAGTAAAACAAGATAT+AGG - Chr1:39692465-39692484 None:intergenic 25.0%
! TGTTATTGTTTCACTTGATT+TGG + Chr1:39692980-39692999 MsG0180002518.01.T01:CDS 25.0%
! TTTATCCATCAATAAAAGGT+GGG - Chr1:39691668-39691687 None:intergenic 25.0%
! TTTGAAAAATGAGGTGATAT+GGG + Chr1:39689121-39689140 MsG0180002518.01.T01:intron 25.0%
!! AAGAAAACTCAATACTGATT+TGG + Chr1:39691219-39691238 MsG0180002518.01.T01:intron 25.0%
!! ACATGGATTGATAGAAATAA+AGG - Chr1:39693849-39693868 None:intergenic 25.0%
!! ATGATGTGTCATATTTTCAT+TGG + Chr1:39694597-39694616 MsG0180002518.01.T01:intron 25.0%
!! ATGTTCCTGAATTGATATTT+TGG + Chr1:39688876-39688895 MsG0180002518.01.T01:intron 25.0%
!! ATTGTTAGTGGATATCTTTA+GGG - Chr1:39689332-39689351 None:intergenic 25.0%
!! GAGAATATAAAGCTAACTTT+TGG + Chr1:39691834-39691853 MsG0180002518.01.T01:intron 25.0%
!! GGATAAAATTTGTTTACCTT+GGG - Chr1:39689941-39689960 None:intergenic 25.0%
!! GTATCTCTTTTGATACTTTT+GGG + Chr1:39694123-39694142 MsG0180002518.01.T01:intron 25.0%
!! TATTGTTAGTGGATATCTTT+AGG - Chr1:39689333-39689352 None:intergenic 25.0%
!! TGTATCTCTTTTGATACTTT+TGG + Chr1:39694122-39694141 MsG0180002518.01.T01:intron 25.0%
!! TTATTGTTTCACTTGATTTG+GGG + Chr1:39692982-39693001 MsG0180002518.01.T01:CDS 25.0%
!! TTTTATTATATGGCAGATGA+AGG + Chr1:39693123-39693142 MsG0180002518.01.T01:intron 25.0%
!!! ATATTTTTATGCAAAAGGCT+AGG + Chr1:39689754-39689773 MsG0180002518.01.T01:CDS 25.0%
!!! ATTTTTGTTTTTATCATGCG+TGG + Chr1:39689968-39689987 MsG0180002518.01.T01:intron 25.0%
!!! CATAAAACTAGTATTGATGA+TGG + Chr1:39693370-39693389 MsG0180002518.01.T01:CDS 25.0%
!!! CATGATAATGGAAATTTCTA+TGG - Chr1:39692413-39692432 None:intergenic 25.0%
!!! GTTATTTTTATTTGCTTCCT+AGG + Chr1:39694361-39694380 MsG0180002518.01.T01:intron 25.0%
!!! TAATGACACTTTTAATTGGT+TGG + Chr1:39692887-39692906 MsG0180002518.01.T01:CDS 25.0%
!!! TTTTGAAAAATGAGGTGATA+TGG + Chr1:39689120-39689139 MsG0180002518.01.T01:intron 25.0%
AAAATATTAACACCTTCCGA+AGG - Chr1:39691157-39691176 None:intergenic 30.0%
AAATGTGTGGTCTATATATG+AGG + Chr1:39690167-39690186 MsG0180002518.01.T01:intron 30.0%
AAATTTGTGCTTTCTTGTTC+GGG - Chr1:39696188-39696207 None:intergenic 30.0%
AACAATCCCTATAACTACAA+CGG + Chr1:39692117-39692136 MsG0180002518.01.T01:CDS 30.0%
AATCACTAGGTATAGTGATA+TGG + Chr1:39692929-39692948 MsG0180002518.01.T01:CDS 30.0%
ACATACACTACAAGATACTA+TGG + Chr1:39694689-39694708 MsG0180002518.01.T01:intron 30.0%
ATATCAATATAGTAGGTGTG+TGG - Chr1:39688993-39689012 None:intergenic 30.0%
ATATCACTATACCTAGTGAT+TGG - Chr1:39692930-39692949 None:intergenic 30.0%
ATCAAGTATGTTAATCTCTC+AGG - Chr1:39694030-39694049 None:intergenic 30.0%
ATGATGAATATGCATGGAAT+TGG + Chr1:39695648-39695667 MsG0180002518.01.T01:intron 30.0%
ATTCCTAAAGGAATGCTTAT+AGG - Chr1:39688656-39688675 None:intergenic 30.0%
ATTGAGGAGTAATAGAGAAA+GGG + Chr1:39693291-39693310 MsG0180002518.01.T01:CDS 30.0%
ATTGGTCATGTAATTGAAAG+AGG + Chr1:39688727-39688746 MsG0180002518.01.T01:CDS 30.0%
ATTGGTTGAGACTAAATATG+AGG + Chr1:39694615-39694634 MsG0180002518.01.T01:intron 30.0%
ATTGTTCCAAAAAAGAACAC+CGG - Chr1:39692103-39692122 None:intergenic 30.0%
ATTGTTCCAATAAAGAACAC+CGG - Chr1:39691930-39691949 None:intergenic 30.0%
CATCAGAAAACTATTGTTAG+TGG - Chr1:39689344-39689363 None:intergenic 30.0%
CCGTTAGATATTAGAATTTG+TGG - Chr1:39693875-39693894 None:intergenic 30.0%
CTGAGACATTCAATCAATAT+CGG + Chr1:39693006-39693025 MsG0180002518.01.T01:CDS 30.0%
CTTAAACACATACTAAGCAA+AGG - Chr1:39691320-39691339 None:intergenic 30.0%
GAAGAGAGAATTTCATTGAA+TGG - Chr1:39688560-39688579 None:intergenic 30.0%
GAATTCGATAACAAAGCAAA+CGG - Chr1:39690896-39690915 None:intergenic 30.0%
GAGAAATATTGAAAGTTTCC+CGG + Chr1:39692812-39692831 MsG0180002518.01.T01:CDS 30.0%
GAGATGGAATTTCACAAAAA+AGG - Chr1:39692302-39692321 None:intergenic 30.0%
GGAATGAGTATTTAAGTAAC+TGG + Chr1:39694158-39694177 MsG0180002518.01.T01:intron 30.0%
GGATTGATAGAAATAAAGGT+GGG - Chr1:39693845-39693864 None:intergenic 30.0%
GGGAAGCAATTATCTATAAT+TGG + Chr1:39693311-39693330 MsG0180002518.01.T01:CDS 30.0%
GTTATTATAGCCAAAAGGTT+TGG + Chr1:39693562-39693581 MsG0180002518.01.T01:intron 30.0%
GTTTATCCATCAATAAAAGG+TGG - Chr1:39691669-39691688 None:intergenic 30.0%
TAAATTAACTATTTGGCAGG+AGG - Chr1:39694495-39694514 None:intergenic 30.0%
TAAGCTTTCAACATAACCAT+TGG - Chr1:39693425-39693444 None:intergenic 30.0%
TACAATGAGAAATTCTTGCA+TGG - Chr1:39694654-39694673 None:intergenic 30.0%
TAGCATCAGATCATTGTTAT+TGG + Chr1:39695114-39695133 MsG0180002518.01.T01:intron 30.0%
TATCACTATACCTAGTGATT+GGG - Chr1:39692929-39692948 None:intergenic 30.0%
TATTGAGGAGTAATAGAGAA+AGG + Chr1:39693290-39693309 MsG0180002518.01.T01:CDS 30.0%
TCAATATATACTACCGAAGT+TGG + Chr1:39695771-39695790 MsG0180002518.01.T01:intron 30.0%
TCATGCTTTCAATTGTCATT+CGG - Chr1:39689656-39689675 None:intergenic 30.0%
TGAGACTAAATATGAGGTTT+AGG + Chr1:39694621-39694640 MsG0180002518.01.T01:intron 30.0%
TGATATAAGGGAAACTGAAA+AGG + Chr1:39688750-39688769 MsG0180002518.01.T01:CDS 30.0%
TGGATTGATAGAAATAAAGG+TGG - Chr1:39693846-39693865 None:intergenic 30.0%
TTACATGTATGCATGCATAA+AGG + Chr1:39694463-39694482 MsG0180002518.01.T01:intron 30.0%
TTCTAAACATGTTGAGTGTT+TGG - Chr1:39694187-39694206 None:intergenic 30.0%
TTTACAAATCTGTCAAGGTT+CGG + Chr1:39689782-39689801 MsG0180002518.01.T01:CDS 30.0%
! CAAATCCTTGATAATTCTCA+CGG - Chr1:39692848-39692867 None:intergenic 30.0%
! CACAAATTTTTACAACCTGT+TGG + Chr1:39696199-39696218 MsG0180002518.01.T01:CDS 30.0%
! CACTAACAATAGTTTTCTGA+TGG + Chr1:39689342-39689361 MsG0180002518.01.T01:intron 30.0%
! CGGATAAAATTTGTTTACCT+TGG - Chr1:39689942-39689961 None:intergenic 30.0%
! GAAATGTCGTAAAGAAGTAT+CGG + Chr1:39690321-39690340 MsG0180002518.01.T01:CDS 30.0%
! TATAGTAACTTTAGGTTACG+AGG - Chr1:39691768-39691787 None:intergenic 30.0%
! TCAGTTTAGCTGATAATGAT+TGG + Chr1:39692790-39692809 MsG0180002518.01.T01:CDS 30.0%
! TGACAAGCAAATTCTTTTCA+AGG + Chr1:39690283-39690302 MsG0180002518.01.T01:CDS 30.0%
! TGTTACGGATTAAACCTTTA+CGG - Chr1:39690624-39690643 None:intergenic 30.0%
! TTGTTAGTGGATATCTTTAG+GGG - Chr1:39689331-39689350 None:intergenic 30.0%
! TTTTGCTTCAATAGATAGTG+AGG - Chr1:39692514-39692533 None:intergenic 30.0%
!! AGTTAGCTTTATATTCTCCT+AGG - Chr1:39691832-39691851 None:intergenic 30.0%
!! GACGGATTAAAAAGTGATAA+TGG - Chr1:39694310-39694329 None:intergenic 30.0%
!! GTTAGCTTTATATTCTCCTA+GGG - Chr1:39691831-39691850 None:intergenic 30.0%
!! TGGCTTTATGGATTCTTATT+GGG + Chr1:39695984-39696003 MsG0180002518.01.T01:CDS 30.0%
!! TTGGCTTTATGGATTCTTAT+TGG + Chr1:39695983-39696002 MsG0180002518.01.T01:CDS 30.0%
!!! TTATTTTTGGAAATGGCCAA+TGG + Chr1:39693406-39693425 MsG0180002518.01.T01:CDS 30.0%
AACAATCCCTATGACTACAA+CGG + Chr1:39691944-39691963 MsG0180002518.01.T01:CDS 35.0%
AAGCATTTCATTGATGCTTC+CGG + Chr1:39692586-39692605 MsG0180002518.01.T01:intron 35.0%
AATAAGCTACCCATAAACGA+TGG - Chr1:39689299-39689318 None:intergenic 35.0%
AATCTTTCATGAGTCCGTAA+AGG + Chr1:39690607-39690626 MsG0180002518.01.T01:intron 35.0%
AATGTCAACAATGCAGAAGA+TGG + Chr1:39695747-39695766 MsG0180002518.01.T01:intron 35.0%
AATTTGTGCTTTCTTGTTCG+GGG - Chr1:39696187-39696206 None:intergenic 35.0%
ACAATCCCTATAACTACAAC+GGG + Chr1:39692118-39692137 MsG0180002518.01.T01:CDS 35.0%
ACTATATGTGAGATCGAAAC+TGG + Chr1:39689813-39689832 MsG0180002518.01.T01:CDS 35.0%
AGTTTCGATCTCACATATAG+TGG - Chr1:39689814-39689833 None:intergenic 35.0%
ATAAGCTACCCATAAACGAT+GGG - Chr1:39689298-39689317 None:intergenic 35.0%
ATAAGGGAAACTGAAAAGGA+TGG + Chr1:39688754-39688773 MsG0180002518.01.T01:CDS 35.0%
ATAGTGAGGATCAACAACAA+GGG - Chr1:39692500-39692519 None:intergenic 35.0%
ATATACTTAAGGCCAAGATG+AGG - Chr1:39693612-39693631 None:intergenic 35.0%
ATATGGCAGATGAAGGAATT+TGG + Chr1:39693130-39693149 MsG0180002518.01.T01:intron 35.0%
ATCAGCACATTAAAATCAGC+AGG - Chr1:39690263-39690282 None:intergenic 35.0%
ATCATCAGATGCCTTCTTTA+CGG - Chr1:39690354-39690373 None:intergenic 35.0%
ATGGTGATACACTCATATTG+AGG + Chr1:39693275-39693294 MsG0180002518.01.T01:CDS 35.0%
ATGTACGATAGAACATTTCC+GGG + Chr1:39695794-39695813 MsG0180002518.01.T01:intron 35.0%
ATTACTCGAATGCATATGTC+AGG + Chr1:39694776-39694795 MsG0180002518.01.T01:intron 35.0%
CAAATATGAGTCCATTTGTC+TGG + Chr1:39694074-39694093 MsG0180002518.01.T01:intron 35.0%
CAATTTGAGGAAGGAATTCA+TGG + Chr1:39695836-39695855 MsG0180002518.01.T01:intron 35.0%
CATTCGAGTAATTACTTCCT+CGG - Chr1:39694768-39694787 None:intergenic 35.0%
CCATCCTTAGAAAGAAACAA+TGG - Chr1:39693259-39693278 None:intergenic 35.0%
CGGCTATATTTACTTAGCTA+AGG + Chr1:39691007-39691026 MsG0180002518.01.T01:intron 35.0%
CTACCTATAAGCATTCCTTT+AGG + Chr1:39688650-39688669 MsG0180002518.01.T01:intron 35.0%
CTATATGTGAGATCGAAACT+GGG + Chr1:39689814-39689833 MsG0180002518.01.T01:CDS 35.0%
CTTAGTATGTGTTTAAGCGA+AGG + Chr1:39691323-39691342 MsG0180002518.01.T01:intron 35.0%
CTTGATCTATGAACATGATG+AGG + Chr1:39690120-39690139 MsG0180002518.01.T01:intron 35.0%
GAGTTGCTAATGCCTTTAAT+GGG + Chr1:39689143-39689162 MsG0180002518.01.T01:intron 35.0%
GATGTACGATAGAACATTTC+CGG + Chr1:39695793-39695812 MsG0180002518.01.T01:intron 35.0%
GTCTGATTTATGCAGATTGA+AGG - Chr1:39690918-39690937 None:intergenic 35.0%
GTTGTCATGGTTGCTAAAAA+AGG - Chr1:39688971-39688990 None:intergenic 35.0%
TATATGTGAGATCGAAACTG+GGG + Chr1:39689815-39689834 MsG0180002518.01.T01:CDS 35.0%
TATTGAGCAGTTTGACATGA+TGG + Chr1:39696095-39696114 MsG0180002518.01.T01:intron 35.0%
TCGCAAAAATAAAGTTTCCG+AGG + Chr1:39694748-39694767 MsG0180002518.01.T01:intron 35.0%
TCGTTTATGGGTAGCTTATT+TGG + Chr1:39689299-39689318 MsG0180002518.01.T01:intron 35.0%
TCTTCTGCATTGTTGACATT+TGG - Chr1:39695747-39695766 None:intergenic 35.0%
TGAATTCCTTCCTCAAATTG+CGG - Chr1:39695836-39695855 None:intergenic 35.0%
TTATTACCCACTTTCCTCAA+AGG + Chr1:39694948-39694967 MsG0180002518.01.T01:intron 35.0%
TTATTGGGTGTGACTAATCA+TGG + Chr1:39695999-39696018 MsG0180002518.01.T01:CDS 35.0%
TTCTAATATCTAACGGCTGA+AGG + Chr1:39693879-39693898 MsG0180002518.01.T01:intron 35.0%
TTCTATCGTACATCCAACTT+CGG - Chr1:39695787-39695806 None:intergenic 35.0%
TTCTGGATAATTTCTTCCAC+CGG - Chr1:39694390-39694409 None:intergenic 35.0%
TTTGGTAAACTAGACTTACG+TGG + Chr1:39693700-39693719 MsG0180002518.01.T01:intron 35.0%
TTTGGTTGTGATAATTCCAC+TGG + Chr1:39692705-39692724 MsG0180002518.01.T01:CDS 35.0%
! ACGTAAGTCTAGTTTACCAA+AGG - Chr1:39693701-39693720 None:intergenic 35.0%
! CATGCCATTGTTTCTTTCTA+AGG + Chr1:39693252-39693271 MsG0180002518.01.T01:CDS 35.0%
! CCATTGTTTCTTTCTAAGGA+TGG + Chr1:39693256-39693275 MsG0180002518.01.T01:CDS 35.0%
! CGTAAGTCTAGTTTACCAAA+GGG - Chr1:39693700-39693719 None:intergenic 35.0%
! GAGATATTTTCCTAATGGCT+GGG - Chr1:39692642-39692661 None:intergenic 35.0%
! GCTATAGTTGGTTCTTGTAA+CGG + Chr1:39692544-39692563 MsG0180002518.01.T01:intron 35.0%
! TACGGTTTCGTCTTCAATTT+TGG + Chr1:39692687-39692706 MsG0180002518.01.T01:CDS 35.0%
! TGAGATATTTTCCTAATGGC+TGG - Chr1:39692643-39692662 None:intergenic 35.0%
! TGTTACCCACCTTTTATTGA+TGG + Chr1:39691660-39691679 MsG0180002518.01.T01:intron 35.0%
! TTGGTCGTAATTAAGTTGTC+TGG + Chr1:39689265-39689284 MsG0180002518.01.T01:intron 35.0%
! TTTGTCTGTTTCTTTGTTGC+TGG + Chr1:39688825-39688844 MsG0180002518.01.T01:intron 35.0%
! TTTTGTTCTTTTTGATCGCC+AGG + Chr1:39690067-39690086 MsG0180002518.01.T01:CDS 35.0%
! TTTTTAGATCTACCTTCGGA+AGG + Chr1:39691142-39691161 MsG0180002518.01.T01:intron 35.0%
!! AACGGATTGATTTGTTTGAC+TGG + Chr1:39692562-39692581 MsG0180002518.01.T01:intron 35.0%
!! AATTTTGACACGAACAACTC+TGG - Chr1:39690828-39690847 None:intergenic 35.0%
!! ATTCTTTTCAAGGTTGAGGT+TGG + Chr1:39690293-39690312 MsG0180002518.01.T01:CDS 35.0%
!! ATTTCTTCAAGTTGCTGTGT+CGG + Chr1:39690987-39691006 MsG0180002518.01.T01:intron 35.0%
!! GCAAATTCTTTTCAAGGTTG+AGG + Chr1:39690289-39690308 MsG0180002518.01.T01:CDS 35.0%
!! GGTTATTGATCTCACTTTTG+AGG + Chr1:39688789-39688808 MsG0180002518.01.T01:CDS 35.0%
!! GTGATTTTGATCTCTTGAGA+TGG - Chr1:39692318-39692337 None:intergenic 35.0%
AAAAGGATGGAAGGAAAAGC+AGG + Chr1:39688767-39688786 MsG0180002518.01.T01:CDS 40.0%
AAAGGATGGAAGGAAAAGCA+GGG + Chr1:39688768-39688787 MsG0180002518.01.T01:CDS 40.0%
AAATGCTACATGTCCCGAAA+AGG + Chr1:39693776-39693795 MsG0180002518.01.T01:intron 40.0%
AACTACATTGTGTCGAAGCT+TGG + Chr1:39693983-39694002 MsG0180002518.01.T01:intron 40.0%
AAGCATGATTGAGTCAACTG+AGG + Chr1:39689668-39689687 MsG0180002518.01.T01:CDS 40.0%
AATGCTACATGTCCCGAAAA+GGG + Chr1:39693777-39693796 MsG0180002518.01.T01:intron 40.0%
AATTCTCTCTTCAACTGTCG+AGG + Chr1:39688568-39688587 MsG0180002518.01.T01:CDS 40.0%
ACAATCCCTATGACTACAAC+AGG + Chr1:39691945-39691964 MsG0180002518.01.T01:CDS 40.0%
ACAATCCCTATGACTACAAC+GGG + Chr1:39691945-39691964 MsG0180002518.01.T01:CDS 40.0%
ACCAATTGCATTGCTCTCTT+TGG + Chr1:39688920-39688939 MsG0180002518.01.T01:CDS 40.0%
ACGGTCATATATGCTTTCCA+AGG - Chr1:39694872-39694891 None:intergenic 40.0%
ACGTGTAGATTGATACAGAG+TGG + Chr1:39695931-39695950 MsG0180002518.01.T01:intron 40.0%
ACTACATTGTGTCGAAGCTT+GGG + Chr1:39693984-39694003 MsG0180002518.01.T01:intron 40.0%
AGAAGATGTGCACACAGAAA+AGG + Chr1:39689398-39689417 MsG0180002518.01.T01:intron 40.0%
AGACTCAAGTAGCAAGGTAA+GGG - Chr1:39689503-39689522 None:intergenic 40.0%
AGATCATCACAGAACAACAC+CGG - Chr1:39692190-39692209 None:intergenic 40.0%
AGGCAATTCGTGGAAATTCT+CGG + Chr1:39693899-39693918 MsG0180002518.01.T01:intron 40.0%
AGTACACATTTATGTCGGGA+AGG - Chr1:39693813-39693832 None:intergenic 40.0%
AGTGTATGTTTGTAGTCTCG+CGG - Chr1:39694678-39694697 None:intergenic 40.0%
ATAATGACGTCCCAATCACT+AGG + Chr1:39692916-39692935 MsG0180002518.01.T01:CDS 40.0%
ATCTGTTGTTGAGCTTAGTG+TGG + Chr1:39690535-39690554 MsG0180002518.01.T01:CDS 40.0%
ATTCCGACCAAAAATTTCCG+AGG + Chr1:39694713-39694732 MsG0180002518.01.T01:intron 40.0%
ATTTGTGCTTTCTTGTTCGG+GGG - Chr1:39696186-39696205 None:intergenic 40.0%
CAAAAATTTCCGAGGAAGCA+TGG + Chr1:39694721-39694740 MsG0180002518.01.T01:intron 40.0%
CAAAGGCAAGCATACTAACT+TGG - Chr1:39691303-39691322 None:intergenic 40.0%
CAAGTCATCTGATAAAGACG+CGG - Chr1:39689622-39689641 None:intergenic 40.0%
CAATCCCTATAACTACAACG+GGG + Chr1:39692119-39692138 MsG0180002518.01.T01:CDS 40.0%
CAATTGCATTGCTCTCTTTG+GGG + Chr1:39688922-39688941 MsG0180002518.01.T01:CDS 40.0%
CACAGAGTCAATGCTATTAG+AGG - Chr1:39690761-39690780 None:intergenic 40.0%
CACGGCATTGTACAAATTTG+TGG + Chr1:39694910-39694929 MsG0180002518.01.T01:intron 40.0%
CAGACTTAAACCGCAATTTG+AGG + Chr1:39695823-39695842 MsG0180002518.01.T01:intron 40.0%
CATCAGCTTAGTCCCATTAA+AGG - Chr1:39689158-39689177 None:intergenic 40.0%
CCAATTGCATTGCTCTCTTT+GGG + Chr1:39688921-39688940 MsG0180002518.01.T01:CDS 40.0%
CCAGAAGTTACATTCATGAG+AGG + Chr1:39694404-39694423 MsG0180002518.01.T01:intron 40.0%
CCTCTCATGAATGTAACTTC+TGG - Chr1:39694407-39694426 None:intergenic 40.0%
CGCAAGTGTAAAACTTGCAA+GGG + Chr1:39689909-39689928 MsG0180002518.01.T01:CDS 40.0%
CGCTACTCTTCTATTGACAT+TGG + Chr1:39689523-39689542 MsG0180002518.01.T01:intron 40.0%
CTCAAATTGCGGTTTAAGTC+TGG - Chr1:39695825-39695844 None:intergenic 40.0%
CTGCAGTACACATTTATGTC+GGG - Chr1:39693817-39693836 None:intergenic 40.0%
CTTAAACCGCAATTTGAGGA+AGG + Chr1:39695827-39695846 MsG0180002518.01.T01:intron 40.0%
GATAGTGAGGATCAACAACA+AGG - Chr1:39692501-39692520 None:intergenic 40.0%
GATATGATTAGTGACGCTCT+TGG + Chr1:39696120-39696139 MsG0180002518.01.T01:intron 40.0%
GCACATTACGCCCAATAAAT+GGG - Chr1:39690096-39690115 None:intergenic 40.0%
GCAGATTGTTTCCAATACCA+AGG - Chr1:39692061-39692080 None:intergenic 40.0%
GCATGAGATAACAACCTAGA+TGG - Chr1:39693237-39693256 None:intergenic 40.0%
GCTGATTGTTTCCAATACCA+AGG - Chr1:39692148-39692167 None:intergenic 40.0%
GCTGCAGTACACATTTATGT+CGG - Chr1:39693818-39693837 None:intergenic 40.0%
GCTTTCAATTGTCATTCGGT+TGG - Chr1:39689652-39689671 None:intergenic 40.0%
GGAGTTGCTAATGCCTTTAA+TGG + Chr1:39689142-39689161 MsG0180002518.01.T01:intron 40.0%
GGCTGATTGTTTCAATACCA+AGG - Chr1:39691975-39691994 None:intergenic 40.0%
GTAATGAAAGGATCTCAGTG+AGG - Chr1:39692213-39692232 None:intergenic 40.0%
GTATGAAATAGTCCACCCTT+TGG + Chr1:39693682-39693701 MsG0180002518.01.T01:intron 40.0%
GTCACAACCCATTTATGAGA+GGG + Chr1:39695877-39695896 MsG0180002518.01.T01:intron 40.0%
TAACAACCTAGATGGTTCTC+AGG - Chr1:39693229-39693248 None:intergenic 40.0%
TAATGGCTGGGTTCCATAAA+CGG - Chr1:39692630-39692649 None:intergenic 40.0%
TAGACAGTCATTCTCCAAGT+TGG + Chr1:39691186-39691205 MsG0180002518.01.T01:intron 40.0%
TAGGTATAGTGATATGGCTG+TGG + Chr1:39692935-39692954 MsG0180002518.01.T01:CDS 40.0%
TCAGATGCGTAAGTAAGTCT+TGG + Chr1:39692257-39692276 MsG0180002518.01.T01:intron 40.0%
TCCTCGTAACTTAATGAGCA+AGG + Chr1:39691796-39691815 MsG0180002518.01.T01:intron 40.0%
TCGCAAGTGTAAAACTTGCA+AGG + Chr1:39689908-39689927 MsG0180002518.01.T01:CDS 40.0%
TCGGAATTATGCCGTAAAGA+AGG + Chr1:39690340-39690359 MsG0180002518.01.T01:CDS 40.0%
TCGTGTCAAAATTGAGCACA+AGG + Chr1:39690835-39690854 MsG0180002518.01.T01:intron 40.0%
TCTTCATCAGCATACCAACT+TGG - Chr1:39691203-39691222 None:intergenic 40.0%
TGCAAGACACGCATGTATTT+AGG + Chr1:39689021-39689040 MsG0180002518.01.T01:CDS 40.0%
TGCACATTACGCCCAATAAA+TGG - Chr1:39690097-39690116 None:intergenic 40.0%
TGTACGATAGAACATTTCCG+GGG + Chr1:39695795-39695814 MsG0180002518.01.T01:intron 40.0%
TGTCACAACCCATTTATGAG+AGG + Chr1:39695876-39695895 MsG0180002518.01.T01:intron 40.0%
TTATTTGCTTCCTAGGTTGC+CGG + Chr1:39694368-39694387 MsG0180002518.01.T01:intron 40.0%
TTGAAATCTGGCTGACACTT+CGG - Chr1:39689590-39689609 None:intergenic 40.0%
! AAGTCTAGTTTACCAAAGGG+TGG - Chr1:39693697-39693716 None:intergenic 40.0%
! ATTCTCGGGACGTTTTTGTT+CGG + Chr1:39693914-39693933 MsG0180002518.01.T01:intron 40.0%
! CATGCTTCCTCGGAAATTTT+TGG - Chr1:39694723-39694742 None:intergenic 40.0%
! CTGAAAAACGCCAAACCTTT+TGG - Chr1:39693575-39693594 None:intergenic 40.0%
! CTTTTCCATGTTGAATTCCG+AGG + Chr1:39694838-39694857 MsG0180002518.01.T01:intron 40.0%
! GAAGCTTGGGTTGTTATTCT+TGG + Chr1:39693997-39694016 MsG0180002518.01.T01:intron 40.0%
! GCAGTGTCGTTGTAGTTATA+GGG - Chr1:39691867-39691886 None:intergenic 40.0%
! GGGTCTTTTCGTGATGTATA+CGG + Chr1:39692669-39692688 MsG0180002518.01.T01:CDS 40.0%
! GTCGTAATTAAGTTGTCTGG+AGG + Chr1:39689268-39689287 MsG0180002518.01.T01:intron 40.0%
! GTTTTCCTCGGAATTCAACA+TGG - Chr1:39694846-39694865 None:intergenic 40.0%
! TCAATCAATATCGGTTGCCT+CGG + Chr1:39693015-39693034 MsG0180002518.01.T01:CDS 40.0%
! TTTCCAAGGAACGTTTTCCT+CGG - Chr1:39694858-39694877 None:intergenic 40.0%
!! AACCACTTTAAAAGTGCCAG+TGG - Chr1:39692724-39692743 None:intergenic 40.0%
!! ACGTGGTATTTTTGTGCAGT+TGG + Chr1:39693717-39693736 MsG0180002518.01.T01:intron 40.0%
!! CTCATAAATGGGTTGTGACA+TGG - Chr1:39695876-39695895 None:intergenic 40.0%
!! CTCTAATAGCATTGACTCTG+TGG + Chr1:39690759-39690778 MsG0180002518.01.T01:CDS 40.0%
!! GATATATTTGGTGTGACGAG+TGG - Chr1:39692391-39692410 None:intergenic 40.0%
!! TTCCACTGGCACTTTTAAAG+TGG + Chr1:39692719-39692738 MsG0180002518.01.T01:CDS 40.0%
!!! CTTCCTCGGAAATTTTTGGT+CGG - Chr1:39694719-39694738 None:intergenic 40.0%
AAATGCCGCCTATTCATGCT+GGG + Chr1:39696027-39696046 MsG0180002518.01.T01:CDS 45.0%
ACAACCCATTTATGAGAGGG+AGG + Chr1:39695880-39695899 MsG0180002518.01.T01:intron 45.0%
ACATCGAACCCAGCATGAAT+AGG - Chr1:39696038-39696057 None:intergenic 45.0%
ATGCTACATGTCCCGAAAAG+GGG + Chr1:39693778-39693797 MsG0180002518.01.T01:intron 45.0%
ATTCCGAGGAAAACGTTCCT+TGG + Chr1:39694852-39694871 MsG0180002518.01.T01:intron 45.0%
CAACAACAAGGGTAAACGAC+AGG - Chr1:39692489-39692508 None:intergenic 45.0%
CAACCCATTTATGAGAGGGA+GGG + Chr1:39695881-39695900 MsG0180002518.01.T01:intron 45.0%
CATGATTGAGTCAACTGAGG+TGG + Chr1:39689671-39689690 MsG0180002518.01.T01:CDS 45.0%
CCCAAAGAGAGCAATGCAAT+TGG - Chr1:39688924-39688943 None:intergenic 45.0%
CCTCTCCGTGAGAATTATCA+AGG + Chr1:39692840-39692859 MsG0180002518.01.T01:CDS 45.0%
CTCAACAACAGATCCATCGT+CGG - Chr1:39690528-39690547 None:intergenic 45.0%
GAGACTCAAGTAGCAAGGTA+AGG - Chr1:39689504-39689523 None:intergenic 45.0%
GCAGTCCTGTTGTAGTCATA+GGG - Chr1:39691953-39691972 None:intergenic 45.0%
GCATCCCCGTTGTAGTTATA+GGG - Chr1:39692126-39692145 None:intergenic 45.0%
GCCTTGCTCATTAAGTTACG+AGG - Chr1:39691800-39691819 None:intergenic 45.0%
GGCAATTCGTGGAAATTCTC+GGG + Chr1:39693900-39693919 MsG0180002518.01.T01:intron 45.0%
GGCTGATGTTTCCAATACCA+AGG - Chr1:39691889-39691908 None:intergenic 45.0%
GGGAAACTGAAAAGGATGGA+AGG + Chr1:39688758-39688777 MsG0180002518.01.T01:CDS 45.0%
GTATAGTGATATGGCTGTGG+AGG + Chr1:39692938-39692957 MsG0180002518.01.T01:CDS 45.0%
GTTGTTGAGCTTAGTGTGGA+TGG + Chr1:39690539-39690558 MsG0180002518.01.T01:CDS 45.0%
GTTTATGGAACCCAGCCATT+AGG + Chr1:39692629-39692648 MsG0180002518.01.T01:intron 45.0%
TAACTACAACGACACTGCCT+TGG + Chr1:39691869-39691888 MsG0180002518.01.T01:intron 45.0%
TAATTGGAGGGATCGTAGAG+TGG + Chr1:39693327-39693346 MsG0180002518.01.T01:CDS 45.0%
TAGTAGGTGTGTGGTTGTCA+TGG - Chr1:39688984-39689003 None:intergenic 45.0%
TCAACAACAGATCCATCGTC+GGG - Chr1:39690527-39690546 None:intergenic 45.0%
TGAAATCTGGCTGACACTTC+GGG - Chr1:39689589-39689608 None:intergenic 45.0%
TGCTTATGCTGCTACCTTTG+AGG - Chr1:39694965-39694984 None:intergenic 45.0%
TGTTTGTCACCAATGTCTGC+AGG + Chr1:39690657-39690676 MsG0180002518.01.T01:intron 45.0%
TTATGATGAGCCCGTTGAAG+AGG + Chr1:39696155-39696174 MsG0180002518.01.T01:CDS 45.0%
TTATTGGGCCAACTCAGCAT+GGG + Chr1:39691634-39691653 MsG0180002518.01.T01:intron 45.0%
TTCTCACGGAGAGGAATAAC+CGG - Chr1:39692834-39692853 None:intergenic 45.0%
TTTATTGGGCCAACTCAGCA+TGG + Chr1:39691633-39691652 MsG0180002518.01.T01:intron 45.0%
! AGATCGAAACTGGGGTTGAT+TGG + Chr1:39689823-39689842 MsG0180002518.01.T01:CDS 45.0%
! CAATCAATATCGGTTGCCTC+GGG + Chr1:39693016-39693035 MsG0180002518.01.T01:CDS 45.0%
! CCTTGATAATTCTCACGGAG+AGG - Chr1:39692843-39692862 None:intergenic 45.0%
! CTGCTACCTTTGAGGAAAGT+GGG - Chr1:39694957-39694976 None:intergenic 45.0%
! GGCAGTGTCGTTGTAGTTAT+AGG - Chr1:39691868-39691887 None:intergenic 45.0%
! TTCTCGGGACGTTTTTGTTC+GGG + Chr1:39693915-39693934 MsG0180002518.01.T01:intron 45.0%
!! AACTGTCGAGGAAGTGTCTA+CGG + Chr1:39688580-39688599 MsG0180002518.01.T01:CDS 45.0%
!! AATTTGGCGTTGACGAGTCT+TGG + Chr1:39693146-39693165 MsG0180002518.01.T01:CDS 45.0%
!! ACGAATACTGGCTCCGTTTA+TGG + Chr1:39692614-39692633 MsG0180002518.01.T01:intron 45.0%
!! ACTTTTGGGTGATGACGCTT+TGG + Chr1:39694137-39694156 MsG0180002518.01.T01:intron 45.0%
!! ATTTTTGAGCAGGGAGCAGT+AGG + Chr1:39690227-39690246 MsG0180002518.01.T01:intron 45.0%
!! CCAACAGTTGGCTCTATAAG+CGG - Chr1:39693055-39693074 None:intergenic 45.0%
!! GGCTGTTGATGATATGAAGC+TGG + Chr1:39690780-39690799 MsG0180002518.01.T01:CDS 45.0%
!! TGTTTAGCTTGCTCGAATGC+TGG + Chr1:39690868-39690887 MsG0180002518.01.T01:intron 45.0%
!! TTCAAGGTTGAGGTTGGTGA+AGG + Chr1:39690299-39690318 MsG0180002518.01.T01:CDS 45.0%
!!! TTAGCACCTGTTTTGGTGGT+TGG - Chr1:39690733-39690752 None:intergenic 45.0%
!! ATAAAAACAAAAATTATATT+CGG - Chr1:39689962-39689981 None:intergenic 5.0%
!!! AAACAAATTTTAATTTAATA+GGG + Chr1:39691414-39691433 MsG0180002518.01.T01:intron 5.0%
!!! AAATAAATACATTTTTTATT+GGG + Chr1:39691619-39691638 MsG0180002518.01.T01:intron 5.0%
!!! AAATTTAAGTTTTTTTTTTA+AGG + Chr1:39695424-39695443 MsG0180002518.01.T01:intron 5.0%
!!! TAAACAAATTTTAATTTAAT+AGG + Chr1:39691413-39691432 MsG0180002518.01.T01:intron 5.0%
!!! TAAATAAATACATTTTTTAT+TGG + Chr1:39691618-39691637 MsG0180002518.01.T01:intron 5.0%
AAGTCGCTGCGTACATGACA+GGG + Chr1:39689197-39689216 MsG0180002518.01.T01:CDS 50.0%
ACGGATCCTGAGAACCATCT+AGG + Chr1:39693220-39693239 MsG0180002518.01.T01:CDS 50.0%
ACGTGATAGAAACCCGACGA+TGG + Chr1:39690512-39690531 MsG0180002518.01.T01:intron 50.0%
ACTAGATCACGCGCATTCAC+AGG + Chr1:39691250-39691269 MsG0180002518.01.T01:intron 50.0%
ACTTAAGGCCAAGATGAGGC+TGG - Chr1:39693608-39693627 None:intergenic 50.0%
AGAGCCAACTGTTGGTGTGT+TGG + Chr1:39693060-39693079 MsG0180002518.01.T01:intron 50.0%
AGCCAACTGTTGGTGTGTTG+GGG + Chr1:39693062-39693081 MsG0180002518.01.T01:intron 50.0%
AGCTACCCATAAACGATGGG+AGG - Chr1:39689295-39689314 None:intergenic 50.0%
ATATGAAGCTGGCCAGACGT+CGG + Chr1:39690791-39690810 MsG0180002518.01.T01:CDS 50.0%
ATCTACAGCCAGCCTCATCT+TGG + Chr1:39693597-39693616 MsG0180002518.01.T01:intron 50.0%
ATGCACCCAGTGTGCTTCAT+TGG + Chr1:39689857-39689876 MsG0180002518.01.T01:CDS 50.0%
ATGTCTGCAGGATGTACCAG+AGG + Chr1:39690669-39690688 MsG0180002518.01.T01:intron 50.0%
ATTTCTTCCACCGGCAACCT+AGG - Chr1:39694381-39694400 None:intergenic 50.0%
CAAATGCCGCCTATTCATGC+TGG + Chr1:39696026-39696045 MsG0180002518.01.T01:CDS 50.0%
CAACGACACTGCCTTGGTAT+TGG + Chr1:39691875-39691894 MsG0180002518.01.T01:intron 50.0%
CAAGCTGCATGTCATCGTGA+TGG + Chr1:39690025-39690044 MsG0180002518.01.T01:CDS 50.0%
CATGTCTATTACTCCGTCGC+CGG + Chr1:39692168-39692187 MsG0180002518.01.T01:CDS 50.0%
CCAAAAAAGAACACCGGCGA+CGG - Chr1:39692097-39692116 None:intergenic 50.0%
CCAATAAAGAACACCGGCGA+CGG - Chr1:39691924-39691943 None:intergenic 50.0%
CCACCAAAACAGGTGCTAAG+AGG + Chr1:39690734-39690753 MsG0180002518.01.T01:CDS 50.0%
CCATTTATGAGAGGGAGGGA+GGG + Chr1:39695885-39695904 MsG0180002518.01.T01:intron 50.0%
CCGCTTATAGAGCCAACTGT+TGG + Chr1:39693052-39693071 MsG0180002518.01.T01:intron 50.0%
CCTCCCTCCCTCTCATAAAT+GGG - Chr1:39695887-39695906 None:intergenic 50.0%
CGCCAGGTGACCCATTTATT+GGG + Chr1:39690083-39690102 MsG0180002518.01.T01:intron 50.0%
CGGAGCTGTTCGTTGAAATC+TGG - Chr1:39689602-39689621 None:intergenic 50.0%
CTCAACAGTTTGTGCAGGTG+GGG - Chr1:39694814-39694833 None:intergenic 50.0%
CTGGTACATCCTGCAGACAT+TGG - Chr1:39690669-39690688 None:intergenic 50.0%
CTTCCGGCTGTTACGAATAC+TGG + Chr1:39692602-39692621 MsG0180002518.01.T01:intron 50.0%
GACACACCAACCACCAAAAC+AGG + Chr1:39690724-39690743 MsG0180002518.01.T01:CDS 50.0%
GAGCCAACTGTTGGTGTGTT+GGG + Chr1:39693061-39693080 MsG0180002518.01.T01:intron 50.0%
GAGCCAGTATTCGTAACAGC+CGG - Chr1:39692608-39692627 None:intergenic 50.0%
GAGGTCCTCCCATCGTTTAT+GGG + Chr1:39689287-39689306 MsG0180002518.01.T01:intron 50.0%
GCAGTCCCGTTGTAGTCATA+GGG - Chr1:39692039-39692058 None:intergenic 50.0%
GCTCAACAGTTTGTGCAGGT+GGG - Chr1:39694815-39694834 None:intergenic 50.0%
GCTCAACGCAACCAGACAAA+TGG - Chr1:39694088-39694107 None:intergenic 50.0%
GGCAGTCCTGTTGTAGTCAT+AGG - Chr1:39691954-39691973 None:intergenic 50.0%
GGCATCCCCGTTGTAGTTAT+AGG - Chr1:39692127-39692146 None:intergenic 50.0%
GTAGCGAGACTCAAGTAGCA+AGG - Chr1:39689509-39689528 None:intergenic 50.0%
TAACACCACCCATGCTGAGT+TGG - Chr1:39691645-39691664 None:intergenic 50.0%
TAACGGCTGAAGGCAATTCG+TGG + Chr1:39693889-39693908 MsG0180002518.01.T01:intron 50.0%
TAACTACAACGGGGATGCCT+TGG + Chr1:39692128-39692147 MsG0180002518.01.T01:CDS 50.0%
TCGAACCCAGCATGAATAGG+CGG - Chr1:39696035-39696054 None:intergenic 50.0%
TCGCCAGGTGACCCATTTAT+TGG + Chr1:39690082-39690101 MsG0180002518.01.T01:intron 50.0%
TCTCACGGAGAGGAATAACC+GGG - Chr1:39692833-39692852 None:intergenic 50.0%
TGAACCACTGCTTCATGCAG+TGG + Chr1:39696057-39696076 MsG0180002518.01.T01:intron 50.0%
TGACTACAACAGGACTGCCT+TGG + Chr1:39691955-39691974 MsG0180002518.01.T01:CDS 50.0%
TGCGAGAAACCATGCTTCCT+CGG - Chr1:39694733-39694752 None:intergenic 50.0%
TGCTCAACAGTTTGTGCAGG+TGG - Chr1:39694816-39694835 None:intergenic 50.0%
TGTGACGAGTGACTAGTGTG+AGG - Chr1:39692351-39692370 None:intergenic 50.0%
TGTTCCACTGCATGAAGCAG+TGG - Chr1:39696064-39696083 None:intergenic 50.0%
! AGGTCTCGTGAACCCCTTTT+CGG - Chr1:39693793-39693812 None:intergenic 50.0%
! GCTGCTACCTTTGAGGAAAG+TGG - Chr1:39694958-39694977 None:intergenic 50.0%
! GGACCTCTTAGCACCTGTTT+TGG - Chr1:39690740-39690759 None:intergenic 50.0%
!! ACTGTCGAGGAAGTGTCTAC+GGG + Chr1:39688581-39688600 MsG0180002518.01.T01:CDS 50.0%
!! CCTCTTAGCACCTGTTTTGG+TGG - Chr1:39690737-39690756 None:intergenic 50.0%
!! GGTTTAAGTCTGGTTCTCCC+CGG - Chr1:39695815-39695834 None:intergenic 50.0%
!! TCATCGTGATGGACGACACA+GGG + Chr1:39690036-39690055 MsG0180002518.01.T01:CDS 50.0%
!!! GTAGTTTTGTGACCGACGTC+TGG - Chr1:39690806-39690825 None:intergenic 50.0%
AGCAAGGCAGAGCAAACCCT+AGG + Chr1:39691812-39691831 MsG0180002518.01.T01:intron 55.0%
CAACGGGACTGCCTTGGTAT+TGG + Chr1:39692047-39692066 MsG0180002518.01.T01:CDS 55.0%
CAACGGGGATGCCTTGGTAT+TGG + Chr1:39692134-39692153 MsG0180002518.01.T01:CDS 55.0%
CCCATTTATGAGAGGGAGGG+AGG + Chr1:39695884-39695903 MsG0180002518.01.T01:intron 55.0%
CCCTCCCTCCCTCTCATAAA+TGG - Chr1:39695888-39695907 None:intergenic 55.0%
CCGTCGCCGGTGTTCTTTAT+TGG + Chr1:39691921-39691940 MsG0180002518.01.T01:CDS 55.0%
CGCCCAATAAATGGGTCACC+TGG - Chr1:39690088-39690107 None:intergenic 55.0%
CGGCGACGGAGTAATAGACA+TGG - Chr1:39692170-39692189 None:intergenic 55.0%
CTGCATGAGTCCTCAACCTC+TGG - Chr1:39690688-39690707 None:intergenic 55.0%
GAAGTCGCTGCGTACATGAC+AGG + Chr1:39689196-39689215 MsG0180002518.01.T01:CDS 55.0%
GATCGTAGAGTGGAGCGAAC+AGG + Chr1:39693337-39693356 MsG0180002518.01.T01:CDS 55.0%
GCAGGATGTACCAGAGGTTG+AGG + Chr1:39690675-39690694 MsG0180002518.01.T01:intron 55.0%
GCCAACTGTTGGTGTGTTGG+GGG + Chr1:39693063-39693082 MsG0180002518.01.T01:intron 55.0%
GCGTGCTCAACAGTTTGTGC+AGG - Chr1:39694819-39694838 None:intergenic 55.0%
GGAGGTCCTCCCATCGTTTA+TGG + Chr1:39689286-39689305 MsG0180002518.01.T01:intron 55.0%
GGCAGTCCCGTTGTAGTCAT+AGG - Chr1:39692040-39692059 None:intergenic 55.0%
GGTGGCCAATGAAGCACACT+GGG - Chr1:39689865-39689884 None:intergenic 55.0%
GTCATGTACGCAGCGACTTC+AGG - Chr1:39689196-39689215 None:intergenic 55.0%
TCACAGAACAACACCGGCGA+CGG - Chr1:39692184-39692203 None:intergenic 55.0%
TCATTGGCCACCGCTGACAA+CGG + Chr1:39689873-39689892 MsG0180002518.01.T01:CDS 55.0%
TCCCCCAACACACCAACAGT+TGG - Chr1:39693067-39693086 None:intergenic 55.0%
TGACTACAACGGGACTGCCT+TGG + Chr1:39692041-39692060 MsG0180002518.01.T01:CDS 55.0%
TTTGCTTCCTAGGTTGCCGG+TGG + Chr1:39694371-39694390 MsG0180002518.01.T01:intron 55.0%
! ACAGAGCACTCCGTTGTCAG+CGG - Chr1:39689886-39689905 None:intergenic 55.0%
! GGTCTCGTGAACCCCTTTTC+GGG - Chr1:39693792-39693811 None:intergenic 55.0%
!! GGTTGCCTCGGGTTTTGATG+AGG + Chr1:39693027-39693046 MsG0180002518.01.T01:intron 55.0%
!! GTCATCGTGATGGACGACAC+AGG + Chr1:39690035-39690054 MsG0180002518.01.T01:CDS 55.0%
!!! CCGTCGCCGGTGTTCTTTTT+TGG + Chr1:39692094-39692113 MsG0180002518.01.T01:CDS 55.0%
CATGTCTACGACTCCGTCGC+CGG + Chr1:39691908-39691927 MsG0180002518.01.T01:CDS 60.0%
CGGCACCTCATCAAAACCCG+AGG - Chr1:39693035-39693054 None:intergenic 60.0%
CGGGGGTAGCTCCTCTTCAA+CGG - Chr1:39696169-39696188 None:intergenic 60.0%
CGGTGGCCAATGAAGCACAC+TGG - Chr1:39689866-39689885 None:intergenic 60.0%
GGGGGTAGCTCCTCTTCAAC+GGG - Chr1:39696168-39696187 None:intergenic 60.0%
TTGGGCCAACTCAGCATGGG+TGG + Chr1:39691637-39691656 MsG0180002518.01.T01:intron 60.0%
! CTTGCAAGGGTGCAGTCCCA+AGG + Chr1:39689922-39689941 MsG0180002518.01.T01:CDS 60.0%
ATCGCACGGGTCTCACGGGT+CGG - Chr1:39691576-39691595 None:intergenic 65.0%
CGGCGACGGAGTCGTAGACA+TGG - Chr1:39691910-39691929 None:intergenic 65.0%
CGTGAGACCCGTGCGATGCA+CGG + Chr1:39691579-39691598 MsG0180002518.01.T01:intron 65.0%
CGTGCATCGCACGGGTCTCA+CGG - Chr1:39691581-39691600 None:intergenic 65.0%
GAGCACTCCGTTGTCAGCGG+TGG - Chr1:39689883-39689902 None:intergenic 65.0%
GTGCATCGCACGGGTCTCAC+GGG - Chr1:39691580-39691599 None:intergenic 65.0%
AACGCCGCCGTGCATCGCAC+GGG - Chr1:39691589-39691608 None:intergenic 70.0%
GAACGCCGCCGTGCATCGCA+CGG - Chr1:39691590-39691609 None:intergenic 70.0%
GAGACCCGTGCGATGCACGG+CGG + Chr1:39691582-39691601 MsG0180002518.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 39688536 39696233 39688536 ID=MsG0180002518.01;Name=MsG0180002518.01
Chr1 mRNA 39688536 39696233 39688536 ID=MsG0180002518.01.T01;Parent=MsG0180002518.01;Name=MsG0180002518.01.T01;_AED=0.51;_eAED=0.55;_QI=0|0|0|0.85|1|1|14|0|811
Chr1 exon 39688536 39688602 39688536 ID=MsG0180002518.01.T01:exon:8137;Parent=MsG0180002518.01.T01
Chr1 exon 39688722 39688818 39688722 ID=MsG0180002518.01.T01:exon:8138;Parent=MsG0180002518.01.T01
Chr1 exon 39688915 39689042 39688915 ID=MsG0180002518.01.T01:exon:8139;Parent=MsG0180002518.01.T01
Chr1 exon 39689146 39689218 39689146 ID=MsG0180002518.01.T01:exon:8140;Parent=MsG0180002518.01.T01
Chr1 exon 39689560 39689943 39689560 ID=MsG0180002518.01.T01:exon:8141;Parent=MsG0180002518.01.T01
Chr1 exon 39690022 39690088 39690022 ID=MsG0180002518.01.T01:exon:8142;Parent=MsG0180002518.01.T01
Chr1 exon 39690239 39690415 39690239 ID=MsG0180002518.01.T01:exon:8143;Parent=MsG0180002518.01.T01
Chr1 exon 39690521 39690592 39690521 ID=MsG0180002518.01.T01:exon:8144;Parent=MsG0180002518.01.T01
Chr1 exon 39690679 39690812 39690679 ID=MsG0180002518.01.T01:exon:8145;Parent=MsG0180002518.01.T01
Chr1 exon 39691907 39692264 39691907 ID=MsG0180002518.01.T01:exon:8146;Parent=MsG0180002518.01.T01
Chr1 exon 39692651 39693037 39692651 ID=MsG0180002518.01.T01:exon:8147;Parent=MsG0180002518.01.T01
Chr1 exon 39693139 39693427 39693139 ID=MsG0180002518.01.T01:exon:8148;Parent=MsG0180002518.01.T01
Chr1 exon 39695949 39696048 39695949 ID=MsG0180002518.01.T01:exon:8149;Parent=MsG0180002518.01.T01
Chr1 exon 39696131 39696233 39696131 ID=MsG0180002518.01.T01:exon:8150;Parent=MsG0180002518.01.T01
Chr1 CDS 39688536 39688602 39688536 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39688722 39688818 39688722 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39688915 39689042 39688915 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39689146 39689218 39689146 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39689560 39689943 39689560 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39690022 39690088 39690022 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39690239 39690415 39690239 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39690521 39690592 39690521 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39690679 39690812 39690679 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39691907 39692264 39691907 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39692651 39693037 39692651 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39693139 39693427 39693139 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39695949 39696048 39695949 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Chr1 CDS 39696131 39696233 39696131 ID=MsG0180002518.01.T01:cds;Parent=MsG0180002518.01.T01
Gene Sequence

>MsG0180002518.01.T01

ATGAACGTTTTTGAGTTCAAGCCATTCAATGAAATTCTCTCTTCAACTGTCGAGGAAGTGTCTACGGATGTTATTGGTCATGTAATTGAAAGAGGTGATATAAGGGAAACTGAAAAGGATGGAAGGAAAAGCAGGGTTATTGATCTCACTTTTGAGGATCTTGAAAACAACCAATTGCATTGCTCTCTTTGGGGTGAACATGCTGACAAAATTGTGACCTTTTTTAGCAACCATGACAACCACACACCTACTATATTGATATTTCAGTTCTGCAAGACACGCATGTATTTAGTTGCTAATGCCTTTAATGGGACTAAGCTGATGCTAAATGACGATTTGCCTGAAGTCGCTGCGTACATGACAGGAATGAAAAATGCATCAATACAGTTAACCCGAAGTGTCAGCCAGATTTCAACGAACAGCTCCGCGTCTTTATCAGATGACTTGCTCAACACCAACCGAATGACAATTGAAAGCATGATTGAGTCAACTGAGGTGGCTATCTGTTTAATGAAATTTTTAGATGTATTTTTGGATTCATCTTTGTTATTTTTGTTCAATATTTTTATGCAAAAGGCTAGGAAATATTTACAAATCTGTCAAGGTTCGGTGCTTGCCACTATATGTGAGATCGAAACTGGGGTTGATTGGTACTTTCGATCATGCACCCAGTGTGCTTCATTGGCCACCGCTGACAACGGAGTGCTCTGTTGTCGCAAGTGTAAAACTTGCAAGGGTGCAGTCCCAAGGTTCAAGCTGCATGTCATCGTGATGGACGACACAGGGTCCACTAATTTTGTTCTTTTTGATCGCCAGGGAGCAGTAGGCAATGATTATCCTGCTGATTTTAATGTGCTGATTGACAAGCAAATTCTTTTCAAGGTTGAGGTTGGTGAAGGAAATGTCGTAAAGAAGTATCGGAATTATGCCGTAAAGAAGGCATCTGATGATGTTGCTGTCATTGAGCAGTTTATGTTTAAGTATAATTTGAAGAAACCCGACGATGGATCTGTTGTTGAGCTTAGTGTGGATGGTGATGCGCCAAATAATTCAAATGTTCAGATGGATGTACCAGAGGTTGAGGACTCATGCAGCAATACATGTGTGATTGACACACCAACCACCAAAACAGGTGCTAAGAGGTCCTCTAATAGCATTGACTCTGTGGCTGTTGATGATATGAAGCTGGCCAGACGTCGCCATGTCTACGACTCCGTCGCCGGTGTTCTTTATTGGAACAATCCCTATGACTACAACAGGACTGCCTTGGTATTGAAACAATCAGCCATGTCTACGACTCCGTCGCCGGTGTTCTTTATTGGAACAATCCCTATGACTACAACGGGACTGCCTTGGTATTGGAAACAATCTGCCATGTCTACGACTCCGTCGCCGGTGTTCTTTTTTGGAACAATCCCTATAACTACAACGGGGATGCCTTGGTATTGGAAACAATCAGCCATGTCTATTACTCCGTCGCCGGTGTTGTTCTGTGATGATCTCCTCACTGAGATCCTTTCATTACTTTCTGTGAAATCTCTTCTTCGATTCAGATGCGAAAATATCTCAAAAATTGGGTCTTTTCGTGATGTATACGGTTTCGTCTTCAATTTTGGTTGTGATAATTCCACTGGCACTTTTAAAGTGGTTGCGTCACGTTACATTCGTGATCATTTGACATGCGATGTGAGAGTTTTCAGTTTAGCTGATAATGATTGGAGAAATATTGAAAGTTTCCCGGTTATTCCTCTCCGTGAGAATTATCAAGGATTTGAATATATTGATGTGTTTCTTAATGACACTTTTAATTGGTTGGCTATTCATAATGACGTCCCAATCACTAGGTATAGTGATATGGCTGTGGAGGATATCACTGTTGAGCAGATTGTTATTGTTTCACTTGATTTGGGGACTGAGACATTCAATCAATATCGGTTGCCTCGGATGAAGGAATTTGGCGTTGACGAGTCTTGGACTCAATTTCTTAAAATTAGTTATTACGATCTTCAATTAAAATATCACTTTACGGATCCTGAGAACCATCTAGGTTGTTATCTCATGCCATTGTTTCTTTCTAAGGATGGTGATACACTCATATTGAGGAGTAATAGAGAAAGGGAAGCAATTATCTATAATTGGAGGGATCGTAGAGTGGAGCGAACAGGAATTATTGTGCATAAAACTAGTATTGATGATGGAACTAAAAGTACTTTATTTTTGGAAATGGCCAATGAGTGGAGAAGATGTCATCAAACATTTAAAAAATGTTGGCTTTATGGATTCTTATTGGGTGTGACTAATCATGGTGAACAAATGCCGCCTATTCATGCTGGTGACGCTCTTGGAGTGAACATGTCTTATGATGAGCCCGTTGAAGAGGAGCTACCCCCGAACAAGAAAGCACAAATTTTTACAACCTGTTGGAAAGATAAATGA
Protein sequence

>MsG0180002518.01.T01

MNVFEFKPFNEILSSTVEEVSTDVIGHVIERGDIRETEKDGRKSRVIDLTFEDLENNQLHCSLWGEHADKIVTFFSNHDNHTPTILIFQFCKTRMYLVANAFNGTKLMLNDDLPEVAAYMTGMKNASIQLTRSVSQISTNSSASLSDDLLNTNRMTIESMIESTEVAICLMKFLDVFLDSSLLFLFNIFMQKARKYLQICQGSVLATICEIETGVDWYFRSCTQCASLATADNGVLCCRKCKTCKGAVPRFKLHVIVMDDTGSTNFVLFDRQGAVGNDYPADFNVLIDKQILFKVEVGEGNVVKKYRNYAVKKASDDVAVIEQFMFKYNLKKPDDGSVVELSVDGDAPNNSNVQMDVPEVEDSCSNTCVIDTPTTKTGAKRSSNSIDSVAVDDMKLARRRHVYDSVAGVLYWNNPYDYNRTALVLKQSAMSTTPSPVFFIGTIPMTTTGLPWYWKQSAMSTTPSPVFFFGTIPITTTGMPWYWKQSAMSITPSPVLFCDDLLTEILSLLSVKSLLRFRCENISKIGSFRDVYGFVFNFGCDNSTGTFKVVASRYIRDHLTCDVRVFSLADNDWRNIESFPVIPLRENYQGFEYIDVFLNDTFNWLAIHNDVPITRYSDMAVEDITVEQIVIVSLDLGTETFNQYRLPRMKEFGVDESWTQFLKISYYDLQLKYHFTDPENHLGCYLMPLFLSKDGDTLILRSNREREAIIYNWRDRRVERTGIIVHKTSIDDGTKSTLFLEMANEWRRCHQTFKKCWLYGFLLGVTNHGEQMPPIHAGDALGVNMSYDEPVEEELPPNKKAQIFTTCWKDK*