AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048238.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048238.01.T01 MTR_1g014640 96.569 204 7 0 1 204 1 204 4.74e-144 405
MsG0080048238.01.T01 MTR_1g013400 96.569 204 7 0 1 204 1 204 4.74e-144 405
MsG0080048238.01.T01 MTR_3g105730 88.820 161 18 0 44 204 1 161 2.70e-100 290
MsG0080048238.01.T01 MTR_3g105730 88.820 161 18 0 44 204 1 161 4.33e-100 292
MsG0080048238.01.T01 MTR_3g105730 90.299 134 13 0 71 204 6 139 7.45e-84 250
MsG0080048238.01.T01 MTR_1g115570 61.972 142 46 2 62 198 75 213 1.33e-54 178
MsG0080048238.01.T01 MTR_3g091060 52.071 169 74 2 43 204 53 221 7.36e-52 171
MsG0080048238.01.T01 MTR_2g078760 36.111 180 94 6 46 205 36 214 1.98e-26 102
MsG0080048238.01.T01 MTR_2g078760 36.111 180 94 6 46 205 36 214 1.49e-25 101
MsG0080048238.01.T01 MTR_2g078760 36.111 180 94 6 46 205 36 214 2.88e-25 101
MsG0080048238.01.T01 MTR_2g008850 42.222 135 75 3 66 198 22 155 1.48e-24 98.2
MsG0080048238.01.T01 MTR_4g094208 41.481 135 76 3 66 198 18 151 2.63e-24 95.9
MsG0080048238.01.T01 MTR_2g078760 41.880 117 66 2 90 205 20 135 1.26e-23 95.1
MsG0080048238.01.T01 MTR_5g063940 39.706 136 79 3 66 199 23 157 1.92e-23 95.1
MsG0080048238.01.T01 MTR_4g094208 41.481 135 76 3 66 198 18 151 2.32e-23 95.1
MsG0080048238.01.T01 MTR_8g463130 38.816 152 81 5 50 198 14 156 2.67e-23 94.7
MsG0080048238.01.T01 MTR_3g074610 36.709 158 97 3 44 199 1 157 6.45e-23 94.0
MsG0080048238.01.T01 MTR_2g008850 45.455 110 58 2 90 198 1 109 9.69e-23 92.4
MsG0080048238.01.T01 MTR_8g463130 39.516 124 72 3 77 198 6 128 7.60e-22 90.5
MsG0080048238.01.T01 MTR_5g063940 43.243 111 61 2 90 199 1 110 3.72e-21 88.2
MsG0080048238.01.T01 MTR_4g094542 41.406 128 71 3 76 201 117 242 1.02e-19 86.3
MsG0080048238.01.T01 MTR_3g464700 40.833 120 65 2 85 202 95 210 3.25e-19 84.7
MsG0080048238.01.T01 MTR_5g071550 38.583 127 72 2 78 202 124 246 8.62e-19 82.8
MsG0080048238.01.T01 MTR_5g071550 38.583 127 72 2 78 202 124 246 1.47e-18 83.2
MsG0080048238.01.T01 MTR_5g071550 38.583 127 72 2 78 202 124 246 2.30e-18 82.8
MsG0080048238.01.T01 MTR_3g464650 36.538 156 83 4 51 202 43 186 2.37e-18 82.0
MsG0080048238.01.T01 MTR_4g116420 37.209 129 72 2 79 198 87 215 1.33e-16 77.8
MsG0080048238.01.T01 MTR_5g024340 34.848 132 75 4 79 202 87 215 9.39e-15 72.4
MsG0080048238.01.T01 MTR_6g081850 34.400 125 73 3 81 196 48 172 1.87e-14 71.2
MsG0080048238.01.T01 MTR_3g107880 34.815 135 77 4 75 199 22 155 2.06e-14 71.2
MsG0080048238.01.T01 MTR_3g107880 34.815 135 77 4 75 199 79 212 2.88e-14 71.2
MsG0080048238.01.T01 MTR_3g107880 34.815 135 77 4 75 199 80 213 2.89e-14 71.2
MsG0080048238.01.T01 MTR_1g086350 34.815 135 67 5 85 200 87 219 3.75e-14 70.9
MsG0080048238.01.T01 MTR_1g086350 34.815 135 67 5 85 200 71 203 3.88e-14 70.9
MsG0080048238.01.T01 MTR_1g050520 35.507 138 79 3 76 204 386 522 5.16e-14 70.9
MsG0080048238.01.T01 MTR_1g086350 35.514 107 58 3 104 200 12 117 2.68e-13 67.8
MsG0080048238.01.T01 MTR_2g020970 37.594 133 73 5 70 199 55 180 2.70e-13 68.2
MsG0080048238.01.T01 MTR_2g020970 37.594 133 73 5 70 199 55 180 3.93e-13 67.8
MsG0080048238.01.T01 MTR_4g118340 37.755 98 58 2 106 201 84 180 7.34e-13 67.0
MsG0080048238.01.T01 MTR_1g015110 28.659 164 80 5 78 204 240 403 8.37e-13 67.0
MsG0080048238.01.T01 MTR_8g102550 30.921 152 75 6 73 196 98 247 4.16e-12 64.7
MsG0080048238.01.T01 MTR_5g080680 31.852 135 78 3 78 198 102 236 5.04e-12 63.9
MsG0080048238.01.T01 MTR_5g080680 31.852 135 78 3 78 198 102 236 7.20e-12 64.3
MsG0080048238.01.T01 MTR_3g491830 27.815 151 93 4 60 199 46 191 4.55e-11 61.6
MsG0080048238.01.T01 MTR_2g040500 27.835 194 91 5 53 197 195 388 7.19e-11 61.2
MsG0080048238.01.T01 MTR_4g123080 31.852 135 71 4 85 200 82 214 7.46e-11 61.2
MsG0080048238.01.T01 MTR_4g123080 34.615 104 57 2 107 200 94 196 8.19e-11 60.8
MsG0080048238.01.T01 MTR_3g104710 27.778 162 75 5 78 197 231 392 8.46e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048238.01.T01 AT4G31750 90.683 161 14 1 44 204 1 160 1.94e-100 293
MsG0080048238.01.T01 AT4G31750 90.683 161 14 1 44 204 1 160 3.10e-100 293
MsG0080048238.01.T01 AT4G31750 90.683 161 14 1 44 204 1 160 3.10e-100 293
MsG0080048238.01.T01 AT5G24940 83.333 156 25 1 44 199 1 155 4.06e-89 270
MsG0080048238.01.T01 AT5G10740 80.124 161 31 1 44 204 1 160 1.86e-86 259
MsG0080048238.01.T01 AT5G10740 80.124 161 31 1 44 204 1 160 1.86e-86 259
MsG0080048238.01.T01 AT1G43900 59.286 140 52 1 66 200 107 246 3.87e-52 172
MsG0080048238.01.T01 AT5G53140 52.143 140 67 0 65 204 89 228 5.63e-46 157
MsG0080048238.01.T01 AT5G53140 52.143 140 67 0 65 204 89 228 5.63e-46 157
MsG0080048238.01.T01 AT1G34750 42.647 136 75 3 66 199 23 157 2.84e-27 104
MsG0080048238.01.T01 AT1G34750 42.647 136 75 3 66 199 23 157 3.70e-27 105
MsG0080048238.01.T01 AT1G34750 42.647 136 75 3 66 199 23 157 3.70e-27 105
MsG0080048238.01.T01 AT1G34750 42.647 136 75 3 66 199 23 157 3.70e-27 105
MsG0080048238.01.T01 AT1G78200 41.135 141 81 2 66 204 21 161 1.00e-26 103
MsG0080048238.01.T01 AT1G78200 41.135 141 81 2 66 204 21 161 1.00e-26 103
MsG0080048238.01.T01 AT1G78200 41.135 141 81 2 66 204 21 161 1.00e-26 103
MsG0080048238.01.T01 AT4G28400 41.304 138 77 4 64 198 21 157 5.11e-24 96.3
MsG0080048238.01.T01 AT4G28400 41.304 138 77 4 64 198 21 157 1.19e-23 95.9
MsG0080048238.01.T01 AT1G78200 41.880 117 67 1 90 205 1 117 1.35e-23 94.7
MsG0080048238.01.T01 AT1G78200 41.880 117 67 1 90 205 1 117 1.35e-23 94.7
MsG0080048238.01.T01 AT2G34740 42.742 124 67 3 75 196 81 202 1.53e-23 96.3
MsG0080048238.01.T01 AT2G34740 42.742 124 67 3 75 196 99 220 1.66e-23 96.3
MsG0080048238.01.T01 AT2G34740 42.742 124 67 3 75 196 85 206 1.81e-23 96.3
MsG0080048238.01.T01 AT4G28400 41.481 135 75 4 67 198 2 135 2.68e-23 94.7
MsG0080048238.01.T01 AT2G20630 43.200 125 68 3 76 198 30 153 2.98e-23 94.7
MsG0080048238.01.T01 AT2G20630 43.200 125 68 3 76 198 30 153 5.30e-23 94.4
MsG0080048238.01.T01 AT1G22280 40.157 127 73 3 74 198 30 155 1.25e-22 91.3
MsG0080048238.01.T01 AT3G15260 40.141 142 81 4 66 204 29 169 4.66e-22 91.7
MsG0080048238.01.T01 AT3G15260 40.141 142 81 4 66 204 29 169 4.66e-22 91.7
MsG0080048238.01.T01 AT1G22280 39.844 128 74 3 73 198 29 155 1.04e-21 90.9
MsG0080048238.01.T01 AT1G22280 38.806 134 73 4 73 198 29 161 7.00e-20 85.9
MsG0080048238.01.T01 AT1G07160 36.986 146 82 4 62 202 107 247 3.56e-17 79.3
MsG0080048238.01.T01 AT3G51470 38.462 130 74 4 76 202 27 153 1.24e-16 77.4
MsG0080048238.01.T01 AT3G51470 38.462 130 74 4 76 202 71 197 1.62e-16 77.4
MsG0080048238.01.T01 AT2G40180 38.889 126 65 4 85 202 136 257 3.28e-16 76.6
MsG0080048238.01.T01 AT1G67820 34.532 139 79 3 72 202 74 208 3.35e-16 76.6
MsG0080048238.01.T01 AT1G67820 34.532 139 79 3 72 202 110 244 5.58e-16 76.3
MsG0080048238.01.T01 AT2G40860 36.879 141 72 4 76 204 391 526 2.50e-15 74.7
MsG0080048238.01.T01 AT3G06270 37.008 127 71 4 70 194 56 175 2.57e-15 73.9
MsG0080048238.01.T01 AT2G40860 36.879 141 72 4 76 204 391 526 3.50e-15 74.3
MsG0080048238.01.T01 AT2G40860 36.879 141 72 4 76 204 391 526 4.11e-15 73.9
MsG0080048238.01.T01 AT2G30020 36.585 123 72 2 85 204 147 266 4.14e-15 73.6
MsG0080048238.01.T01 AT2G40860 36.879 141 72 4 76 204 293 428 5.76e-15 73.6
MsG0080048238.01.T01 AT2G25620 36.290 124 70 2 85 199 97 220 1.80e-14 71.6
MsG0080048238.01.T01 AT2G25620 36.290 124 70 2 85 199 97 220 1.80e-14 71.6
MsG0080048238.01.T01 AT2G33700 39.362 94 56 1 107 200 122 214 2.35e-14 71.2
MsG0080048238.01.T01 AT3G62260 32.593 135 70 4 85 200 86 218 1.01e-13 69.7
MsG0080048238.01.T01 AT3G62260 32.593 135 70 4 85 200 85 217 1.05e-13 69.7
MsG0080048238.01.T01 AT3G17250 36.792 106 55 3 106 200 156 260 1.32e-13 69.3
MsG0080048238.01.T01 AT3G62260 33.077 130 66 4 90 200 1 128 8.01e-13 66.6
MsG0080048238.01.T01 AT1G48040 37.273 110 43 3 107 198 115 216 6.19e-12 64.3
MsG0080048238.01.T01 AT5G59220 32.867 143 76 5 78 202 112 252 4.26e-11 61.6
MsG0080048238.01.T01 AT4G27800 29.139 151 91 4 60 199 45 190 6.25e-11 61.6
MsG0080048238.01.T01 AT5G59220 32.867 143 76 5 78 202 112 252 8.39e-11 61.2

Find 52 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGATCAAATTACTAAAT+AGG 0.269326 contig250end:-48438 None:intergenic
TGGTGTCAGAAATGAATTTC+GGG 0.277480 contig250end:-48462 None:intergenic
TGAATATTCAACTTGTGATA+TGG 0.282310 contig250end:+45727 MsG0080048238.01.T01:CDS
CTACAGACCTATTGCAGATT+TGG 0.286258 contig250end:-48482 None:intergenic
GCTTCCACTGCCATTCTTGT+TGG 0.352895 contig250end:+48679 MsG0080048238.01.T01:CDS
TTGGTGTCAGAAATGAATTT+CGG 0.353974 contig250end:-48463 None:intergenic
AGGTTATTCTTGCTTCAAAA+AGG 0.359448 contig250end:-45631 None:intergenic
CCACTATTGTTATGATAACT+TGG 0.368566 contig250end:+45606 MsG0080048238.01.T01:exon
ACAAGAATTGACGGCGTTGA+TGG 0.370122 contig250end:+47448 MsG0080048238.01.T01:CDS
TCCATTGAAGATCTCTTGCC+AGG 0.370550 contig250end:-47412 None:intergenic
GTTTGCTTGTTGCAAATGTT+GGG 0.374361 contig250end:+48707 MsG0080048238.01.T01:CDS
CTGTTAGTGGTGGAGGGCTC+AGG 0.380832 contig250end:+45807 MsG0080048238.01.T01:CDS
CGTTTGCTTGTTGCAAATGT+TGG 0.389439 contig250end:+48706 MsG0080048238.01.T01:CDS
CTGAGCCCTCCACCACTAAC+AGG 0.401508 contig250end:-45806 None:intergenic
GCAGCATGAACCTGACTTGA+AGG 0.411927 contig250end:-45773 None:intergenic
GTTATATGCAGGGGTGGAAA+TGG 0.436154 contig250end:+48742 MsG0080048238.01.T01:CDS
TCTGACACCAAATCTGCAAT+AGG 0.436455 contig250end:+48475 MsG0080048238.01.T01:CDS
CCAAGTTATCATAACAATAG+TGG 0.438250 contig250end:-45606 None:intergenic
GAATATTCAACTTGTGATAT+GGG 0.443257 contig250end:+45728 MsG0080048238.01.T01:CDS
AATAATCAAAACAGAGATGC+TGG 0.452585 contig250end:+48649 MsG0080048238.01.T01:CDS
TAGTAGCTGCATAATCGTTA+TGG 0.470518 contig250end:+48771 MsG0080048238.01.T01:CDS
TAATCGTTATGGTTGTCAAA+TGG 0.471446 contig250end:+48782 MsG0080048238.01.T01:CDS
ACCCCTGCATATAACAGCTC+TGG 0.472724 contig250end:-48734 None:intergenic
TATGGATATGCTAGCTCCCC+TGG 0.473211 contig250end:+47394 MsG0080048238.01.T01:CDS
TCTCTTCTCCTCTCTCCCTA+AGG 0.490415 contig250end:+45357 MsG0080048238.01.T01:five_prime_UTR
CATAACAATAGTGGAAAAGT+GGG 0.492404 contig250end:-45597 None:intergenic
ACTCCAGAGCTGTTATATGC+AGG 0.496874 contig250end:+48731 MsG0080048238.01.T01:CDS
CCCTGGCAAGAGATCTTCAA+TGG 0.496968 contig250end:+47411 MsG0080048238.01.T01:CDS
GGCGTTGATGGCGAAGTTGT+TGG 0.502083 contig250end:+47460 MsG0080048238.01.T01:CDS
TCATAACAATAGTGGAAAAG+TGG 0.503209 contig250end:-45598 None:intergenic
CTCCAGAGCTGTTATATGCA+GGG 0.504830 contig250end:+48732 MsG0080048238.01.T01:CDS
CAAACGGTCACCAACAAGAA+TGG 0.514978 contig250end:-48689 None:intergenic
AGAAAGTACCTTAGGGAGAG+AGG 0.515490 contig250end:-45365 None:intergenic
GCTGATGATACACCTGTTAG+TGG 0.523474 contig250end:+45794 MsG0080048238.01.T01:CDS
ATATGTATCTACAGCCAGAA+TGG 0.533971 contig250end:+47361 MsG0080048238.01.T01:intron
CAACATTTGCAACAAGCAAA+CGG 0.552780 contig250end:-48705 None:intergenic
CCATTGAAGATCTCTTGCCA+GGG 0.555774 contig250end:-47411 None:intergenic
GATACACCTGTTAGTGGTGG+AGG 0.559527 contig250end:+45800 MsG0080048238.01.T01:CDS
ATGCAGGGGTGGAAATGGTA+AGG 0.564751 contig250end:+48747 MsG0080048238.01.T01:CDS
GTCACCAACAAGAATGGCAG+TGG 0.571832 contig250end:-48683 None:intergenic
CAGAATGGAAAATTCAGCTA+TGG 0.581697 contig250end:+47376 MsG0080048238.01.T01:CDS
TAACAATATTGCGTGTGTAG+AGG 0.594920 contig250end:-45651 None:intergenic
TTTGCTTGTTGCAAATGTTG+GGG 0.604673 contig250end:+48708 MsG0080048238.01.T01:CDS
TCCAGAGCTGTTATATGCAG+GGG 0.611886 contig250end:+48733 MsG0080048238.01.T01:CDS
AGAGCTGTTATATGCAGGGG+TGG 0.625035 contig250end:+48736 MsG0080048238.01.T01:CDS
CATTGAAGATCTCTTGCCAG+GGG 0.630301 contig250end:-47410 None:intergenic
ATACACCTGTTAGTGGTGGA+GGG 0.634978 contig250end:+45801 MsG0080048238.01.T01:CDS
TGATTTCAGAAATTCAGAGT+CGG 0.642009 contig250end:-48623 None:intergenic
GATGATACACCTGTTAGTGG+TGG 0.682529 contig250end:+45797 MsG0080048238.01.T01:CDS
TGTCAGAAATGAATTTCGGG+TGG 0.709462 contig250end:-48459 None:intergenic
TTAAAACTTTCAGGTCATGG+TGG 0.715764 contig250end:+48385 MsG0080048238.01.T01:intron
ATAACAATAGTGGAAAAGTG+GGG 0.726296 contig250end:-45596 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATACCTATTATAAATGA+AGG + contig250end:48343-48362 MsG0080048238.01.T01:intron 15.0%
!!! AACTAAGATTTTTTTTTTTG+TGG + contig250end:45533-45552 MsG0080048238.01.T01:intron 15.0%
!!! ACTAAGATTTTTTTTTTTGT+GGG + contig250end:45534-45553 MsG0080048238.01.T01:intron 15.0%
!!! GTTTTTTTTTTACTATTTCT+TGG + contig250end:47193-47212 MsG0080048238.01.T01:intron 15.0%
!!! TTATTCTTAGGATTTTAAAT+TGG + contig250end:46110-46129 MsG0080048238.01.T01:intron 15.0%
!!! TTTATCATTTTTGTTGTTTA+AGG + contig250end:45886-45905 MsG0080048238.01.T01:intron 15.0%
!! ATTGAAGAAAATCAGTTTAA+AGG - contig250end:48531-48550 None:intergenic 20.0%
!! CTGTGTAAAAAAAATACAAA+TGG - contig250end:48585-48604 None:intergenic 20.0%
!! TATATTATAGTATCAAGCAT+AGG - contig250end:48329-48348 None:intergenic 20.0%
!! TTTGTTTGGTAAAAAATAGT+GGG + contig250end:46165-46184 MsG0080048238.01.T01:intron 20.0%
!!! AAGGTTTTAAATTGATATTG+CGG + contig250end:46217-46236 MsG0080048238.01.T01:intron 20.0%
!!! ATAAAGTATAAATCTGGTTT+TGG + contig250end:47851-47870 MsG0080048238.01.T01:intron 20.0%
!!! ATGTTGTGATTTTGATATTA+TGG + contig250end:46684-46703 MsG0080048238.01.T01:intron 20.0%
!!! ATTCATTAATAGCAAGTTTT+TGG + contig250end:48040-48059 MsG0080048238.01.T01:intron 20.0%
!!! ATTGTTTCTTCTTCATTTTT+TGG + contig250end:45673-45692 MsG0080048238.01.T01:CDS 20.0%
!!! ATTTTCCTTTTGAAGTTATT+GGG + contig250end:47690-47709 MsG0080048238.01.T01:intron 20.0%
!!! CTAAGATTTTTTTTTTTGTG+GGG + contig250end:45535-45554 MsG0080048238.01.T01:intron 20.0%
!!! TTTAAAACCATTGTTATTCT+CGG + contig250end:46802-46821 MsG0080048238.01.T01:intron 20.0%
!!! TTTAATCCTTTAAGAAGTAT+TGG + contig250end:48110-48129 MsG0080048238.01.T01:intron 20.0%
! AGCTAACCTTCATTTATAAT+AGG - contig250end:48352-48371 None:intergenic 25.0%
! CAATTGTAATCGCAATATAA+AGG - contig250end:46568-46587 None:intergenic 25.0%
! GAATATTCAACTTGTGATAT+GGG + contig250end:45728-45747 MsG0080048238.01.T01:CDS 25.0%
! GTAAAAAAAATACAAATGGC+AGG - contig250end:48581-48600 None:intergenic 25.0%
! GTAAATAAAAAAGCCAGAAT+AGG - contig250end:47270-47289 None:intergenic 25.0%
! GTGAAAAATTATCTTGATGT+GGG + contig250end:46506-46525 MsG0080048238.01.T01:intron 25.0%
! TAAAACCATGATTATTCTCA+AGG + contig250end:46606-46625 MsG0080048238.01.T01:intron 25.0%
! TAAAACCTTGAGAATAATCA+TGG - contig250end:46614-46633 None:intergenic 25.0%
! TAAAATCCTAAGAATAACCA+TGG - contig250end:46107-46126 None:intergenic 25.0%
! TGAAAAATTATCTTGATGTG+GGG + contig250end:46507-46526 MsG0080048238.01.T01:intron 25.0%
! TGAATATTCAACTTGTGATA+TGG + contig250end:45727-45746 MsG0080048238.01.T01:CDS 25.0%
! TGTCTCATAAAGTATAAATC+TGG + contig250end:47845-47864 MsG0080048238.01.T01:intron 25.0%
! TTAAAACCATGGTTATTCTT+AGG + contig250end:46098-46117 MsG0080048238.01.T01:intron 25.0%
! TTAAAACCTTAAACAAACCA+TGG - contig250end:45965-45984 None:intergenic 25.0%
! TTTCTCTATATTTCCCTATT+GGG + contig250end:45461-45480 MsG0080048238.01.T01:intron 25.0%
!! AACATCTTATTAGTTCTCTA+TGG - contig250end:47627-47646 None:intergenic 25.0%
!! AAGATGCAAAATTTTGTACA+TGG - contig250end:45443-45462 None:intergenic 25.0%
!! ACATAGAATGGTTTTTCTTA+AGG + contig250end:46198-46217 MsG0080048238.01.T01:intron 25.0%
!! ACATCTTATTAGTTCTCTAT+GGG - contig250end:47626-47645 None:intergenic 25.0%
!! AGATGCAAAATTTTGTACAT+GGG - contig250end:45442-45461 None:intergenic 25.0%
!! CTTTCTTGTTTAAAACTTTC+AGG + contig250end:48376-48395 MsG0080048238.01.T01:intron 25.0%
!! CTTTGTTTGGTAAAAAATAG+TGG + contig250end:46164-46183 MsG0080048238.01.T01:intron 25.0%
!! GAAAAAAAGGAGACAAATTT+TGG - contig250end:45312-45331 None:intergenic 25.0%
!! TAAATTGATATTGCGGTTTT+AGG + contig250end:46224-46243 MsG0080048238.01.T01:intron 25.0%
!! TCTTTGTATTTTTCTGATCA+TGG + contig250end:47140-47159 MsG0080048238.01.T01:intron 25.0%
!! TTAAAACCATTGTTATTCTC+GGG + contig250end:46803-46822 MsG0080048238.01.T01:intron 25.0%
!! TTTAAATTGTTGTTACGATG+CGG + contig250end:46630-46649 MsG0080048238.01.T01:intron 25.0%
!! TTTTATGAGACAAGAATTGA+CGG + contig250end:47439-47458 MsG0080048238.01.T01:CDS 25.0%
!!! AAGGTTTTAAATTGATGTTG+CGG + contig250end:45905-45924 MsG0080048238.01.T01:intron 25.0%
!!! ACTTGCTATTAATGAATTGA+AGG - contig250end:48037-48056 None:intergenic 25.0%
!!! CATTTTAATACCATGGTTAT+AGG + contig250end:46996-47015 MsG0080048238.01.T01:intron 25.0%
!!! GATTTTCCTTTTGAAGTTAT+TGG + contig250end:47689-47708 MsG0080048238.01.T01:intron 25.0%
!!! GTTGTTTTGATTATTCTGAT+CGG + contig250end:47873-47892 MsG0080048238.01.T01:intron 25.0%
!!! TTCTGGCTTTTTTATTTACT+AGG + contig250end:47271-47290 MsG0080048238.01.T01:intron 25.0%
!!! TTTCCTTAATTTGTTTCTGT+CGG + contig250end:47664-47683 MsG0080048238.01.T01:intron 25.0%
!!! TTTTGAAGTTATTGGGAAAT+GGG + contig250end:47697-47716 MsG0080048238.01.T01:intron 25.0%
AAAAACCATGGTTATTCTCA+AGG + contig250end:46408-46427 MsG0080048238.01.T01:intron 30.0%
AACAACAATACCTATAACCA+TGG - contig250end:47009-47028 None:intergenic 30.0%
AATAATCAAAACAGAGATGC+TGG + contig250end:48649-48668 MsG0080048238.01.T01:CDS 30.0%
AGAGCAGTGTATTTAAATTG+TGG - contig250end:48290-48309 None:intergenic 30.0%
AGGTTATTCTTGCTTCAAAA+AGG - contig250end:45634-45653 None:intergenic 30.0%
ATTACAATTGTAGTTGCAGA+CGG + contig250end:46578-46597 MsG0080048238.01.T01:intron 30.0%
CAACATAACCACAACATAAA+AGG - contig250end:46670-46689 None:intergenic 30.0%
CAATTACTGCGACAATATAA+AGG - contig250end:46766-46785 None:intergenic 30.0%
CATTTCCCAATAACTTCAAA+AGG - contig250end:47698-47717 None:intergenic 30.0%
CCAAGTTATCATAACAATAG+TGG - contig250end:45609-45628 None:intergenic 30.0%
CCACTATTGTTATGATAACT+TGG + contig250end:45606-45625 MsG0080048238.01.T01:exon 30.0%
CCTAAAGTCGGAAAAATTAA+AGG - contig250end:47300-47319 None:intergenic 30.0%
CGTGAAAAATTATCTTGATG+TGG + contig250end:46505-46524 MsG0080048238.01.T01:intron 30.0%
CTTTCTCTATATTTCCCTAT+TGG + contig250end:45460-45479 MsG0080048238.01.T01:intron 30.0%
GAAAATTGTCTTGATGTTGT+GGG + contig250end:46289-46308 MsG0080048238.01.T01:intron 30.0%
GGCTGATCAAATTACTAAAT+AGG - contig250end:48441-48460 None:intergenic 30.0%
GTTGTAGTTGAAACATTGAT+CGG + contig250end:47581-47600 MsG0080048238.01.T01:intron 30.0%
TAAAACCTTGAGAATAACCA+TGG - contig250end:46416-46435 None:intergenic 30.0%
TAATCGTTATGGTTGTCAAA+TGG + contig250end:48782-48801 MsG0080048238.01.T01:CDS 30.0%
TAATGTCATTCATACTTGGA+AGG + contig250end:47032-47051 MsG0080048238.01.T01:intron 30.0%
TACCATCAAAAACTCCAAAA+AGG - contig250end:47486-47505 None:intergenic 30.0%
TGAAAATTGTCTTGATGTTG+TGG + contig250end:46288-46307 MsG0080048238.01.T01:intron 30.0%
TGATTTCAGAAATTCAGAGT+CGG - contig250end:48626-48645 None:intergenic 30.0%
TGGTTAATGTCATTCATACT+TGG + contig250end:47028-47047 MsG0080048238.01.T01:intron 30.0%
TTAAAGGATCAAACTGTGAT+AGG - contig250end:48515-48534 None:intergenic 30.0%
TTATATTGTCGCAGTAATTG+TGG + contig250end:46766-46785 MsG0080048238.01.T01:intron 30.0%
! AAACTTTTGATCACCCAATA+GGG - contig250end:45477-45496 None:intergenic 30.0%
! ATAACAATAGTGGAAAAGTG+GGG - contig250end:45599-45618 None:intergenic 30.0%
! ATGGTTATAGGTATTGTTGT+TGG + contig250end:47008-47027 MsG0080048238.01.T01:intron 30.0%
! CAAACGGAAATTTAAAACCA+TGG + contig250end:46087-46106 MsG0080048238.01.T01:intron 30.0%
! CAACAGAAAGTATAAGACAA+TGG - contig250end:47983-48002 None:intergenic 30.0%
! CATAACAATAGTGGAAAAGT+GGG - contig250end:45600-45619 None:intergenic 30.0%
! GGTGCATGTTTTTCTTTATA+TGG + contig250end:48061-48080 MsG0080048238.01.T01:intron 30.0%
! GTGAATGTTAACTTGATATG+CGG + contig250end:46896-46915 MsG0080048238.01.T01:intron 30.0%
! TAAAACCATTGTTATTCTCG+GGG + contig250end:46804-46823 MsG0080048238.01.T01:intron 30.0%
! TCATAACAATAGTGGAAAAG+TGG - contig250end:45601-45620 None:intergenic 30.0%
! TCTTTGAGAATAATTTCGAG+AGG + contig250end:47952-47971 MsG0080048238.01.T01:intron 30.0%
! TGTTTAAAACTTTCAGGTCA+TGG + contig250end:48382-48401 MsG0080048238.01.T01:intron 30.0%
! TTAAATTGTTGTTACGATGC+GGG + contig250end:46631-46650 MsG0080048238.01.T01:intron 30.0%
! TTTAAATTGTTGTTGCGATG+CGG + contig250end:46432-46451 MsG0080048238.01.T01:intron 30.0%
!! CCTTTAATTTTTCCGACTTT+AGG + contig250end:47297-47316 MsG0080048238.01.T01:intron 30.0%
!! CTATCCATGCTACTTATTTT+TGG + contig250end:47538-47557 MsG0080048238.01.T01:intron 30.0%
!! GAATAACCATGGTTTGTTTA+AGG + contig250end:45956-45975 MsG0080048238.01.T01:intron 30.0%
!! TTGGTGTCAGAAATGAATTT+CGG - contig250end:48466-48485 None:intergenic 30.0%
!!! CTTTTGAAGTTATTGGGAAA+TGG + contig250end:47696-47715 MsG0080048238.01.T01:intron 30.0%
!!! TTGCATGTTGTGTTACTTTT+CGG + contig250end:46141-46160 MsG0080048238.01.T01:intron 30.0%
AACAAACCATGGTTATTCTC+AGG - contig250end:45954-45973 None:intergenic 35.0%
ACCTCCAAAAATAAGTAGCA+TGG - contig250end:47545-47564 None:intergenic 35.0%
ATATGTATCTACAGCCAGAA+TGG + contig250end:47361-47380 MsG0080048238.01.T01:intron 35.0%
CAACATAAAAGGCAACAAAC+AGG - contig250end:46659-46678 None:intergenic 35.0%
CAACATTTGCAACAAGCAAA+CGG - contig250end:48708-48727 None:intergenic 35.0%
CAACTGCAGTCACAATATAA+AGG - contig250end:46061-46080 None:intergenic 35.0%
CAAGAGCCAATACTTCTTAA+AGG - contig250end:48119-48138 None:intergenic 35.0%
CAATTGTAGCCGGAATATAA+AGG - contig250end:46963-46982 None:intergenic 35.0%
CACACATAAAGAGGAAAGTT+TGG + contig250end:47806-47825 MsG0080048238.01.T01:intron 35.0%
CAGAATGGAAAATTCAGCTA+TGG + contig250end:47376-47395 MsG0080048238.01.T01:CDS 35.0%
CTGACAGCAATTAAAAACCA+TGG + contig250end:46396-46415 MsG0080048238.01.T01:intron 35.0%
CTTCCAAAGCCTTTATATTC+CGG + contig250end:46951-46970 MsG0080048238.01.T01:intron 35.0%
GAATGTCTTTAGTCCTATTC+TGG + contig250end:47254-47273 MsG0080048238.01.T01:intron 35.0%
GGTTCAAGACGAATGTTTAT+TGG + contig250end:47161-47180 MsG0080048238.01.T01:intron 35.0%
GTAGCATGGATAGAAAGAAA+TGG - contig250end:47531-47550 None:intergenic 35.0%
GTGTATTTAAATTGTGGCCA+TGG - contig250end:48284-48303 None:intergenic 35.0%
TAAAACCCCGAGAATAACAA+TGG - contig250end:46812-46831 None:intergenic 35.0%
TAACAATATTGCGTGTGTAG+AGG - contig250end:45654-45673 None:intergenic 35.0%
TAAGGAAACACTAAGTCACA+TGG - contig250end:47735-47754 None:intergenic 35.0%
TAGTAGCTGCATAATCGTTA+TGG + contig250end:48771-48790 MsG0080048238.01.T01:CDS 35.0%
TCATTGAATCGACCTAAAGT+CGG - contig250end:47312-47331 None:intergenic 35.0%
TTTCCTTATGCAATGCTTCT+AGG + contig250end:47747-47766 MsG0080048238.01.T01:intron 35.0%
TTTGATCCTGAGAATAACCA+TGG + contig250end:45945-45964 MsG0080048238.01.T01:intron 35.0%
! AGGATTTTAAATTGGCGTTG+CGG + contig250end:46118-46137 MsG0080048238.01.T01:intron 35.0%
! CAAACTTTTGATCACCCAAT+AGG - contig250end:45478-45497 None:intergenic 35.0%
! CAATTGTGATTGTGTTGTTG+AGG + contig250end:46334-46353 MsG0080048238.01.T01:intron 35.0%
! CATAGCTGAATTTTCCATTC+TGG - contig250end:47378-47397 None:intergenic 35.0%
! GTTTGCTTGTTGCAAATGTT+GGG + contig250end:48707-48726 MsG0080048238.01.T01:CDS 35.0%
! TCTTGTCTTTTGTGGTTGTT+TGG + contig250end:46250-46269 MsG0080048238.01.T01:intron 35.0%
! TGGTGTCAGAAATGAATTTC+GGG - contig250end:48465-48484 None:intergenic 35.0%
! TGTTTTATCACCTTCAAGTC+AGG + contig250end:45763-45782 MsG0080048238.01.T01:CDS 35.0%
! TTAAAACTTTCAGGTCATGG+TGG + contig250end:48385-48404 MsG0080048238.01.T01:intron 35.0%
! TTAAATTGTTGTTGCGATGC+GGG + contig250end:46433-46452 MsG0080048238.01.T01:intron 35.0%
! TTTGCTTGTTGCAAATGTTG+GGG + contig250end:48708-48727 MsG0080048238.01.T01:CDS 35.0%
!! GTTACGTTGCGATTTTGATA+TGG + contig250end:46874-46893 MsG0080048238.01.T01:intron 35.0%
!! GTTTGTTGCCTTTTATGTTG+TGG + contig250end:46659-46678 MsG0080048238.01.T01:intron 35.0%
!! TAGAGAGAGAAAGTACCTTA+GGG - contig250end:45375-45394 None:intergenic 35.0%
!! TTAGAGAGAGAAAGTACCTT+AGG - contig250end:45376-45395 None:intergenic 35.0%
!! TTAGGTTGTCTTGTCTTTTG+TGG + contig250end:46242-46261 MsG0080048238.01.T01:intron 35.0%
!!! ATTCGCAACTTGGTTTTATG+TGG + contig250end:47111-47130 MsG0080048238.01.T01:intron 35.0%
!!! ATTTTTGGAGGTACTAAGCA+AGG + contig250end:47553-47572 MsG0080048238.01.T01:intron 35.0%
!!! TCCATGCTACTTATTTTTGG+AGG + contig250end:47541-47560 MsG0080048238.01.T01:intron 35.0%
!!! TGTTACTTTTCGGCTTTGTT+TGG + contig250end:46151-46170 MsG0080048238.01.T01:intron 35.0%
!!! TTTTTGGAGGTACTAAGCAA+GGG + contig250end:47554-47573 MsG0080048238.01.T01:intron 35.0%
AAACGTAACCACAACACAGA+AGG - contig250end:46472-46491 None:intergenic 40.0%
ACTGCAGTTGTAGTTGCAAA+CGG + contig250end:46071-46090 MsG0080048238.01.T01:intron 40.0%
AGAAGAAAAACCTCCTGAGA+CGG - contig250end:47922-47941 None:intergenic 40.0%
ATGCCTTCACAAATTGCCTA+TGG + contig250end:48216-48235 MsG0080048238.01.T01:intron 40.0%
CAACACAAAAGGCAACAAAC+AGG - contig250end:46852-46871 None:intergenic 40.0%
CAACGTAACCACAACACAAA+AGG - contig250end:46863-46882 None:intergenic 40.0%
CCACCGACAGAAACAAATTA+AGG - contig250end:47670-47689 None:intergenic 40.0%
CTACAGACCTATTGCAGATT+TGG - contig250end:48485-48504 None:intergenic 40.0%
CTTCACAAATTGCCTATGGT+GGG + contig250end:48220-48239 MsG0080048238.01.T01:intron 40.0%
CTTGATGTTGTGGGAAATTG+AGG + contig250end:46298-46317 MsG0080048238.01.T01:intron 40.0%
GAGAGAGAGAAGGGAAAAAA+AGG - contig250end:45325-45344 None:intergenic 40.0%
GATTTATTTACCCCCACCAT+AGG - contig250end:48235-48254 None:intergenic 40.0%
GCCACAATGACGTGTTTATA+GGG - contig250end:48176-48195 None:intergenic 40.0%
TAGCCGGAATATAAAGGCTT+TGG - contig250end:46957-46976 None:intergenic 40.0%
TCTGACACCAAATCTGCAAT+AGG + contig250end:48475-48494 MsG0080048238.01.T01:CDS 40.0%
TCTGTGTTGTGGTTACGTTT+CGG + contig250end:46472-46491 MsG0080048238.01.T01:intron 40.0%
TGATATGCGGTTGCAATTGT+GGG + contig250end:46909-46928 MsG0080048238.01.T01:intron 40.0%
TGGGAAATTGAGGATAGATG+CGG + contig250end:46308-46327 MsG0080048238.01.T01:intron 40.0%
TGTCAGAAATGAATTTCGGG+TGG - contig250end:48462-48481 None:intergenic 40.0%
TTCACAAATTGCCTATGGTG+GGG + contig250end:48221-48240 MsG0080048238.01.T01:intron 40.0%
TTGATATGCGGTTGCAATTG+TGG + contig250end:46908-46927 MsG0080048238.01.T01:intron 40.0%
TTGATATGCTGCTGCATATG+TGG + contig250end:46716-46735 MsG0080048238.01.T01:intron 40.0%
TTGCAATTGTGGGTGTGATA+TGG + contig250end:46919-46938 MsG0080048238.01.T01:intron 40.0%
TTGTGGGTGTGATATGGTTT+CGG + contig250end:46925-46944 MsG0080048238.01.T01:intron 40.0%
! CGTGTTTATAGGGCAGATTT+TGG - contig250end:48166-48185 None:intergenic 40.0%
! CGTTTGCTTGTTGCAAATGT+TGG + contig250end:48706-48725 MsG0080048238.01.T01:CDS 40.0%
! GAAAAGTGGGGTCTGTTTTA+TGG - contig250end:45587-45606 None:intergenic 40.0%
!! AAGCCTAGAAGCATTGCATA+AGG - contig250end:47753-47772 None:intergenic 40.0%
!! CAGACGGCATTTTAATACCA+TGG + contig250end:46989-47008 MsG0080048238.01.T01:intron 40.0%
!! CCTTAATTTGTTTCTGTCGG+TGG + contig250end:47667-47686 MsG0080048238.01.T01:intron 40.0%
!! GGTAAAAAATAGTGGGTAGC+TGG + contig250end:46172-46191 MsG0080048238.01.T01:intron 40.0%
!! GTTTGTTGCCTTTTGTGTTG+TGG + contig250end:46852-46871 MsG0080048238.01.T01:intron 40.0%
!!! GGCCTTTTTGGAGTTTTTGA+TGG + contig250end:47481-47500 MsG0080048238.01.T01:CDS 40.0%
AAACACGTCATTGTGGCCTA+TGG + contig250end:48179-48198 MsG0080048238.01.T01:intron 45.0%
AACATTGATCGGACACGTGA+TGG + contig250end:47592-47611 MsG0080048238.01.T01:intron 45.0%
ACATGCACGCACACATAAAG+AGG + contig250end:47797-47816 MsG0080048238.01.T01:intron 45.0%
ACTCCAGAGCTGTTATATGC+AGG + contig250end:48731-48750 MsG0080048238.01.T01:CDS 45.0%
CAAACGGTCACCAACAAGAA+TGG - contig250end:48692-48711 None:intergenic 45.0%
CAACACAGAAGGCAACAAAC+AGG - contig250end:46461-46480 None:intergenic 45.0%
CATTGAAGATCTCTTGCCAG+GGG - contig250end:47413-47432 None:intergenic 45.0%
CCACCATAGGCAATTTGTGA+AGG - contig250end:48222-48241 None:intergenic 45.0%
CCATTGAAGATCTCTTGCCA+GGG - contig250end:47414-47433 None:intergenic 45.0%
CCTTCACAAATTGCCTATGG+TGG + contig250end:48219-48238 MsG0080048238.01.T01:intron 45.0%
CTCCAGAGCTGTTATATGCA+GGG + contig250end:48732-48751 MsG0080048238.01.T01:CDS 45.0%
GATGATACACCTGTTAGTGG+TGG + contig250end:45797-45816 MsG0080048238.01.T01:CDS 45.0%
GCAGTAATTGTGGTTGCAGA+TGG + contig250end:46776-46795 MsG0080048238.01.T01:intron 45.0%
GCCCTATAAACACGTCATTG+TGG + contig250end:48172-48191 MsG0080048238.01.T01:intron 45.0%
GCTACAATTGCAGTTGCAGA+CGG + contig250end:46973-46992 MsG0080048238.01.T01:intron 45.0%
GCTGATGATACACCTGTTAG+TGG + contig250end:45794-45813 MsG0080048238.01.T01:CDS 45.0%
GGCCACAATGACGTGTTTAT+AGG - contig250end:48177-48196 None:intergenic 45.0%
GTTATATGCAGGGGTGGAAA+TGG + contig250end:48742-48761 MsG0080048238.01.T01:CDS 45.0%
TCACAAATTGCCTATGGTGG+GGG + contig250end:48222-48241 MsG0080048238.01.T01:intron 45.0%
TCCAGAGCTGTTATATGCAG+GGG + contig250end:48733-48752 MsG0080048238.01.T01:CDS 45.0%
TCCATTGAAGATCTCTTGCC+AGG - contig250end:47415-47434 None:intergenic 45.0%
TCTGCAACTGCAATTGTAGC+CGG - contig250end:46973-46992 None:intergenic 45.0%
TTGACCAGTGTTGTCGATGA+AGG + contig250end:48136-48155 MsG0080048238.01.T01:intron 45.0%
TTGCGGTTGTATGTTGTACG+AGG + contig250end:45922-45941 MsG0080048238.01.T01:intron 45.0%
! ACAAGAATTGACGGCGTTGA+TGG + contig250end:47448-47467 MsG0080048238.01.T01:CDS 45.0%
! ATACACCTGTTAGTGGTGGA+GGG + contig250end:45801-45820 MsG0080048238.01.T01:CDS 45.0%
! GGTAGCTGGCTTACATAGAA+TGG + contig250end:46186-46205 MsG0080048238.01.T01:intron 45.0%
! GTTTGTTGCCTTCTGTGTTG+TGG + contig250end:46461-46480 MsG0080048238.01.T01:intron 45.0%
!! AGAAAGTACCTTAGGGAGAG+AGG - contig250end:45368-45387 None:intergenic 45.0%
!!! CTTTTTTCGAACACCGTCTC+AGG + contig250end:47906-47925 MsG0080048238.01.T01:intron 45.0%
!!! GGGGTTTTAAGTTGCTGTTG+TGG + contig250end:46823-46842 MsG0080048238.01.T01:intron 45.0%
!! AAAAAAAATTAAATAATTAC+AGG - contig250end:48006-48025 None:intergenic 5.0%
ACCCCTGCATATAACAGCTC+TGG - contig250end:48737-48756 None:intergenic 50.0%
AGAGCTGTTATATGCAGGGG+TGG + contig250end:48736-48755 MsG0080048238.01.T01:CDS 50.0%
ATGCAGGGGTGGAAATGGTA+AGG + contig250end:48747-48766 MsG0080048238.01.T01:CDS 50.0%
CATATGTGGTTGCGTTGTCG+AGG + contig250end:46730-46749 MsG0080048238.01.T01:intron 50.0%
CCAGTGTTGTCGATGAAGGA+AGG + contig250end:48140-48159 MsG0080048238.01.T01:intron 50.0%
CCATTGTGGTTGTGTTGCAG+AGG - contig250end:45999-46018 None:intergenic 50.0%
CCCATGAGAGAGAGAGAGAA+GGG - contig250end:45334-45353 None:intergenic 50.0%
CCCTGGCAAGAGATCTTCAA+TGG + contig250end:47411-47430 MsG0080048238.01.T01:CDS 50.0%
CCCTTCTCTCTCTCTCTCAT+GGG + contig250end:45331-45350 MsG0080048238.01.T01:five_prime_UTR 50.0%
CCTCTGCAACACAACCACAA+TGG + contig250end:45996-46015 MsG0080048238.01.T01:intron 50.0%
CCTTCCTTCATCGACAACAC+TGG - contig250end:48143-48162 None:intergenic 50.0%
GATACACCTGTTAGTGGTGG+AGG + contig250end:45800-45819 MsG0080048238.01.T01:CDS 50.0%
GCTTCCACTGCCATTCTTGT+TGG + contig250end:48679-48698 MsG0080048238.01.T01:CDS 50.0%
GTCACCAACAAGAATGGCAG+TGG - contig250end:48686-48705 None:intergenic 50.0%
TATGGATATGCTAGCTCCCC+TGG + contig250end:47394-47413 MsG0080048238.01.T01:CDS 50.0%
TCCCATGAGAGAGAGAGAGA+AGG - contig250end:45335-45354 None:intergenic 50.0%
TCCCTTCTCTCTCTCTCTCA+TGG + contig250end:45330-45349 MsG0080048238.01.T01:five_prime_UTR 50.0%
TCTCTTCTCCTCTCTCCCTA+AGG + contig250end:45357-45376 MsG0080048238.01.T01:five_prime_UTR 50.0%
TGCTCTGCAGATTCGCAACT+TGG + contig250end:47101-47120 MsG0080048238.01.T01:intron 50.0%
TGGGTGTGATATGGTTTCGG+CGG + contig250end:46928-46947 MsG0080048238.01.T01:intron 50.0%
! ATTTGTGAAGGCATGCTCCG+CGG - contig250end:48210-48229 None:intergenic 50.0%
! GCAGCATGAACCTGACTTGA+AGG - contig250end:45776-45795 None:intergenic 50.0%
! TTTTCGAACACCGTCTCAGG+AGG + contig250end:47909-47928 MsG0080048238.01.T01:intron 50.0%
!!! GGCGAAGTTGTTGGCCTTTT+TGG + contig250end:47469-47488 MsG0080048238.01.T01:CDS 50.0%
CACAATGGCTGCAGCATCTG+CGG + contig250end:46011-46030 MsG0080048238.01.T01:intron 55.0%
GCGATGACATTCCCCCTTGT+CGG + contig250end:48256-48275 MsG0080048238.01.T01:intron 55.0%
!! GGAGGTACTAAGCAAGGGAC+TGG + contig250end:47559-47578 MsG0080048238.01.T01:intron 55.0%
!! GGCGTTGATGGCGAAGTTGT+TGG + contig250end:47460-47479 MsG0080048238.01.T01:CDS 55.0%
CGCAGATGCTGCAGCCATTG+TGG - contig250end:46013-46032 None:intergenic 60.0%
CTGAGCCCTCCACCACTAAC+AGG - contig250end:45809-45828 None:intergenic 60.0%
! CTGTTAGTGGTGGAGGGCTC+AGG + contig250end:45807-45826 MsG0080048238.01.T01:CDS 60.0%
ATTCCCCCTTGTCGGCGCCA+TGG + contig250end:48264-48283 MsG0080048238.01.T01:intron 65.0%
CATCTGCGGTTGCGCTGTCG+AGG + contig250end:46025-46044 MsG0080048238.01.T01:intron 65.0%
TGTGGCCTATGGCACCACCG+CGG + contig250end:48190-48209 MsG0080048238.01.T01:intron 65.0%
! TGTGAAGGCATGCTCCGCGG+TGG - contig250end:48207-48226 None:intergenic 65.0%
!! ATGCTCCGCGGTGGTGCCAT+AGG - contig250end:48198-48217 None:intergenic 65.0%
!! TGTGGCCATGGCGCCGACAA+GGG - contig250end:48272-48291 None:intergenic 65.0%
!! TTGTGGCCATGGCGCCGACA+AGG - contig250end:48273-48292 None:intergenic 65.0%
!! GTGGCCATGGCGCCGACAAG+GGG - contig250end:48271-48290 None:intergenic 70.0%
!! TGGCCATGGCGCCGACAAGG+GGG - contig250end:48270-48289 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
contig250end gene 45225 48819 45225 ID=MsG0080048238.01;Name=MsG0080048238.01
contig250end mRNA 45225 48819 45225 ID=MsG0080048238.01.T01;Parent=MsG0080048238.01;Name=MsG0080048238.01.T01;_AED=0.44;_eAED=0.47;_QI=202|1|0.8|1|0.75|0.6|5|0|217
contig250end exon 45225 45378 45225 ID=MsG0080048238.01.T01:exon:6332;Parent=MsG0080048238.01.T01
contig250end exon 45569 45828 45569 ID=MsG0080048238.01.T01:exon:6333;Parent=MsG0080048238.01.T01
contig250end exon 47375 47502 47375 ID=MsG0080048238.01.T01:exon:6334;Parent=MsG0080048238.01.T01
contig250end exon 48398 48496 48398 ID=MsG0080048238.01.T01:exon:6335;Parent=MsG0080048238.01.T01
contig250end exon 48605 48819 48605 ID=MsG0080048238.01.T01:exon:6336;Parent=MsG0080048238.01.T01
contig250end five_prime_UTR 45225 45378 45225 ID=MsG0080048238.01.T01:five_prime_utr;Parent=MsG0080048238.01.T01
contig250end five_prime_UTR 45569 45616 45569 ID=MsG0080048238.01.T01:five_prime_utr;Parent=MsG0080048238.01.T01
contig250end CDS 45617 45828 45617 ID=MsG0080048238.01.T01:cds;Parent=MsG0080048238.01.T01
contig250end CDS 47375 47502 47375 ID=MsG0080048238.01.T01:cds;Parent=MsG0080048238.01.T01
contig250end CDS 48398 48496 48398 ID=MsG0080048238.01.T01:cds;Parent=MsG0080048238.01.T01
contig250end CDS 48605 48819 48605 ID=MsG0080048238.01.T01:cds;Parent=MsG0080048238.01.T01
Gene Sequence

>MsG0080048238.01.T01

ATGATAACTTGGAACCTTTTTGAAGCAAGAATAACCTCTACACACGCAATATTGTTATTGTTTCTTCTTCATTTTTTGGCTAAAGAAGCTGTTGTATCTGAGAATCTTGTTGAATATTCAACTTGTGATATGGGCTATCTCAATTCTGTTTTATCACCTTCAAGTCAGGTTCATGCTGCTGATGATACACCTGTTAGTGGTGGAGGGCTCAGCCAGAATGGAAAATTCAGCTATGGATATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGCGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCAGCCACCCGAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCATATACGCATACCGACTCTGAATTTCTGAAATCAGAGAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGGTAAGGCTAGTAGCTGCATAATCGTTATGGTTGTCAAATGGAATTTGATTTTCTAA
Protein sequence

>MsG0080048238.01.T01

MITWNLFEARITSTHAILLLFLLHFLAKEAVVSENLVEYSTCDMGYLNSVLSPSSQVHAADDTPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNGKASSCIIVMVVKWNLIF*