AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048314.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048314.01.T01 MTR_7g078120 71.542 629 41 6 1 526 1 594 0.0 850
MsG0080048314.01.T01 MTR_7g078120 71.542 629 41 6 1 526 1 594 0.0 849
MsG0080048314.01.T01 MTR_8g028905 44.898 343 128 8 179 500 290 592 8.13e-85 278
MsG0080048314.01.T01 MTR_8g028905 44.444 108 57 2 8 112 16 123 5.27e-15 79.0
MsG0080048314.01.T01 MTR_8g098605 33.631 559 281 13 1 510 67 584 6.28e-79 263
MsG0080048314.01.T01 MTR_8g098645 48.529 204 102 1 300 503 127 327 1.05e-57 199
MsG0080048314.01.T01 MTR_1g073590 46.875 192 102 0 318 509 381 572 2.37e-55 199
MsG0080048314.01.T01 MTR_1g073590 52.308 65 31 0 1 65 69 133 8.01e-12 68.9
MsG0080048314.01.T01 MTR_1g073530 45.833 192 104 0 318 509 384 575 4.91e-54 195
MsG0080048314.01.T01 MTR_8g098635 47.027 185 98 0 326 510 101 285 5.81e-53 184
MsG0080048314.01.T01 MTR_1g073380 46.597 191 102 0 319 509 395 585 3.35e-52 190
MsG0080048314.01.T01 MTR_1g073380 53.846 65 30 0 1 65 69 133 6.13e-12 69.3
MsG0080048314.01.T01 MTR_8g098635 47.027 185 98 0 326 510 184 368 3.84e-52 185
MsG0080048314.01.T01 MTR_7g066890 37.576 165 90 3 319 472 194 356 4.78e-29 119
MsG0080048314.01.T01 MTR_3g023780 37.222 180 100 4 319 487 149 326 9.56e-29 121
MsG0080048314.01.T01 MTR_7g066890 37.576 165 90 3 319 472 296 458 3.22e-28 119
MsG0080048314.01.T01 MTR_6g071350 38.272 162 77 4 256 415 228 368 7.44e-23 102
MsG0080048314.01.T01 MTR_0259s0060 32.402 179 74 4 319 497 16 147 1.10e-22 95.9
MsG0080048314.01.T01 MTR_7g066880 35.714 154 91 3 319 466 186 337 5.83e-19 89.7
MsG0080048314.01.T01 MTR_5g048010 43.617 94 38 1 322 415 205 283 6.09e-16 79.7
MsG0080048314.01.T01 MTR_1g073420 45.714 70 34 1 444 509 52 121 3.32e-12 64.7
MsG0080048314.01.T01 MTR_8g098655 57.377 61 26 0 1 61 60 120 3.37e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048314.01.T01 AT2G46040 33.523 528 241 15 1 487 72 530 2.80e-63 220
MsG0080048314.01.T01 AT2G46040 33.523 528 241 15 1 487 72 530 2.80e-63 220
MsG0080048314.01.T01 AT2G46040 33.523 528 241 15 1 487 86 544 3.63e-63 220
MsG0080048314.01.T01 AT4G11400 31.942 551 272 20 1 498 50 550 2.63e-60 212
MsG0080048314.01.T01 AT4G11400 31.942 551 272 20 1 498 50 550 2.63e-60 212
MsG0080048314.01.T01 AT5G04110 40.230 174 92 4 319 481 361 533 1.04e-32 133
MsG0080048314.01.T01 AT5G04110 40.230 174 92 4 319 481 361 533 1.04e-32 133
MsG0080048314.01.T01 AT5G04110 40.230 174 92 4 319 481 362 534 1.11e-32 133
MsG0080048314.01.T01 AT2G03470 39.560 182 89 6 319 487 123 296 1.16e-26 114
MsG0080048314.01.T01 AT2G03470 39.560 182 89 6 319 487 122 295 1.17e-26 114
MsG0080048314.01.T01 AT1G13880 34.184 196 109 5 319 501 138 326 3.79e-25 109
MsG0080048314.01.T01 AT1G13880 34.184 196 109 5 319 501 129 317 4.04e-25 108
MsG0080048314.01.T01 AT1G13880 34.184 196 109 5 319 501 128 316 4.14e-25 108
MsG0080048314.01.T01 AT1G26580 35.829 187 101 4 319 487 69 254 1.03e-24 107
MsG0080048314.01.T01 AT5G04110 40.000 145 75 4 319 452 361 504 1.99e-24 108
MsG0080048314.01.T01 AT1G26580 35.829 187 101 4 319 487 135 320 2.12e-24 107
MsG0080048314.01.T01 AT1G26580 35.829 187 101 4 319 487 135 320 2.12e-24 107

Find 179 sgRNAs with CRISPR-Local

Find 631 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGCTTGATAGATGTTTC+TGG 0.140839 contig271end:-165398 MsG0080048314.01.T01:CDS
GTCTAAATTCCACTGGTAAA+AGG 0.214752 contig271end:+165500 None:intergenic
CAGAACATTGGTGCCGTCTA+TGG 0.239720 contig271end:-167198 MsG0080048314.01.T01:CDS
GGCGTTGGCTGTGGCTTCTT+AGG 0.242383 contig271end:+165168 None:intergenic
AAACTTTCCCTGCTCTTCTT+AGG 0.251694 contig271end:+165354 None:intergenic
TTATCTCCATTGCAGCATTT+TGG 0.260815 contig271end:+168806 None:intergenic
CAATCGAGGCAAAGGGATTA+AGG 0.264276 contig271end:+167137 None:intergenic
ATTTCTGATGGTGTTGCTTT+TGG 0.269696 contig271end:+163241 None:intergenic
AATCGTAAAATCCGAACTTT+TGG 0.277183 contig271end:-165646 MsG0080048314.01.T01:CDS
GATTTGGTTGGGGAAGAATA+TGG 0.301512 contig271end:-169286 MsG0080048314.01.T01:CDS
ATTCGGGCACTTCAGCTTGA+TGG 0.324498 contig271end:+165730 None:intergenic
ACACCATTGAAGGGTGCTTT+TGG 0.331159 contig271end:-165231 MsG0080048314.01.T01:CDS
GATTGTGTATCATTTGGTTT+TGG 0.332631 contig271end:+163308 None:intergenic
GGCACTTCAGCTTGATGGTT+TGG 0.334418 contig271end:+165735 None:intergenic
TTTGTTGATGGTCAAGTTGC+AGG 0.334472 contig271end:-162412 MsG0080048314.01.T01:CDS
CTTCTAGATTGTGTATCATT+TGG 0.339384 contig271end:+163302 None:intergenic
GGAGCGTTTAACGGAGTTGC+AGG 0.344592 contig271end:-169128 MsG0080048314.01.T01:CDS
AGGTTCCATGCCACGTTTGA+TGG 0.348513 contig271end:-167169 MsG0080048314.01.T01:CDS
TGGGCGATAGAGTTAAGTTT+GGG 0.351590 contig271end:-169150 MsG0080048314.01.T01:CDS
GCGTTGGCTGTGGCTTCTTA+GGG 0.354312 contig271end:+165169 None:intergenic
GTGGGCGATAGAGTTAAGTT+TGG 0.357837 contig271end:-169151 MsG0080048314.01.T01:CDS
TCGATTGAGGGCTATTGTTT+CGG 0.361180 contig271end:-167121 MsG0080048314.01.T01:intron
TGGCGTCCTTGGTTTGTTGA+TGG 0.363403 contig271end:-162424 MsG0080048314.01.T01:CDS
ATGAGTTGTGGGATTTGGTT+GGG 0.366912 contig271end:-169297 MsG0080048314.01.T01:CDS
AAATGCTGCAATGGAGATAA+TGG 0.367094 contig271end:-168803 MsG0080048314.01.T01:CDS
TAAGAATGAGTTGTGGGATT+TGG 0.371336 contig271end:-169302 MsG0080048314.01.T01:CDS
TGGTGATAGTCTTGCACAAT+TGG 0.371629 contig271end:+163328 None:intergenic
GTGAGTTGTGCCAGTCCATT+CGG 0.372553 contig271end:+165713 None:intergenic
TCATCACTGTCAATGTTATC+AGG 0.372585 contig271end:+165270 None:intergenic
TTCGCTTGATAGATGTTTCT+GGG 0.372715 contig271end:-165397 MsG0080048314.01.T01:CDS
ATAGAATGTTGCAAATGTTC+TGG 0.376758 contig271end:-163354 MsG0080048314.01.T01:CDS
GACATCATCGCCACTTTCAT+TGG 0.385220 contig271end:+168708 None:intergenic
AGTGGCTGGGAACTCAAATA+TGG 0.387174 contig271end:-165677 MsG0080048314.01.T01:CDS
CAATGCCTGAAAAGTCAAAA+TGG 0.398546 contig271end:-168556 MsG0080048314.01.T01:CDS
TGGCTTCTTAGGGGATAATA+AGG 0.401536 contig271end:+165179 None:intergenic
GAGTTGGTGTTGGATGATTA+TGG 0.401674 contig271end:-169103 MsG0080048314.01.T01:CDS
TTCATGCCGTTGCCAGGTAC+AGG 0.406356 contig271end:-165592 MsG0080048314.01.T01:CDS
CCTTTGAAGAATGTCGTTGA+TGG 0.409145 contig271end:-169196 MsG0080048314.01.T01:CDS
AGATTTGTATAAGCTGTTCA+TGG 0.410254 contig271end:-169359 MsG0080048314.01.T01:CDS
GTTGGGGAAGAATATGGGTT+GGG 0.412314 contig271end:-169280 MsG0080048314.01.T01:CDS
TATCAGGAGTATGCCTGTTC+TGG 0.414090 contig271end:+165286 None:intergenic
GATGAAGTCAAGAGTGTATA+CGG 0.415499 contig271end:-169064 MsG0080048314.01.T01:CDS
GGGAAGAAGTGAGGCGATGC+TGG 0.415602 contig271end:-165470 MsG0080048314.01.T01:CDS
AGGTTCCCCTTCCAAAAGTT+CGG 0.417302 contig271end:+165635 None:intergenic
AATCCCTTTGCCTCGATTGA+GGG 0.419040 contig271end:-167133 MsG0080048314.01.T01:CDS
ATTTGGTTGGGGAAGAATAT+GGG 0.421040 contig271end:-169285 MsG0080048314.01.T01:CDS
AACGGATCAAACGTGACAAT+GGG 0.422576 contig271end:-165884 MsG0080048314.01.T01:CDS
GATTATGGTGAGGGAGATGT+CGG 0.423212 contig271end:-169088 MsG0080048314.01.T01:CDS
TGAGTTGTGCCAGTCCATTC+GGG 0.426236 contig271end:+165714 None:intergenic
CAAGAGTGATTCTAAGTGGC+TGG 0.427819 contig271end:-165691 MsG0080048314.01.T01:CDS
TTCACACATTTAGTGTTTGA+AGG 0.430928 contig271end:+163501 None:intergenic
GGTGCATCAAGAATTGATTC+TGG 0.431736 contig271end:+165781 None:intergenic
TAATCCCTTTGCCTCGATTG+AGG 0.434981 contig271end:-167134 MsG0080048314.01.T01:CDS
AAAGAGATCTAGAAAATGTT+GGG 0.435560 contig271end:-169397 None:intergenic
TAAGTTTGGGGAGCGTTTAA+CGG 0.437682 contig271end:-169137 MsG0080048314.01.T01:CDS
AACGGAGTTGCAGGCGGAGT+TGG 0.440717 contig271end:-169119 MsG0080048314.01.T01:CDS
AAACATCTATCAAGCGAAGC+AGG 0.442525 contig271end:+165402 None:intergenic
GGGTGTGAAAGTGGGTTCTT+CGG 0.443605 contig271end:-169260 MsG0080048314.01.T01:CDS
ATTATGGTGAGGGAGATGTC+GGG 0.443986 contig271end:-169087 MsG0080048314.01.T01:CDS
ATCGGAATTTACACCATTGA+AGG 0.444707 contig271end:-165241 MsG0080048314.01.T01:CDS
GTTCCCGAAGCGTGATTTAG+TGG 0.446072 contig271end:-169170 MsG0080048314.01.T01:CDS
TCGAAGATCCATGGCGTCCT+TGG 0.448029 contig271end:-162435 MsG0080048314.01.T01:CDS
CTTACGGTAATCACGAGATC+TGG 0.449583 contig271end:-168529 MsG0080048314.01.T01:CDS
AAAAGCAACACCATCAGAAA+TGG 0.451550 contig271end:-163239 MsG0080048314.01.T01:CDS
GGTGATAGTCTTGCACAATT+GGG 0.452287 contig271end:+163329 None:intergenic
CAACATTTCCTAAGAAGAGC+AGG 0.455515 contig271end:-165362 MsG0080048314.01.T01:CDS
CGCCCACTAAATCACGCTTC+GGG 0.472395 contig271end:+169167 None:intergenic
GATGTAGCAAACAGCATGCC+TGG 0.473778 contig271end:-168769 MsG0080048314.01.T01:CDS
TTTGTATGTGGCGTTGGCTG+TGG 0.473835 contig271end:+165159 None:intergenic
TCGCCCACTAAATCACGCTT+CGG 0.475900 contig271end:+169166 None:intergenic
AATCGAGGCAAAGGGATTAA+GGG 0.475933 contig271end:+167138 None:intergenic
CCCAAGGTTATCATCATACA+TGG 0.476856 contig271end:+165926 None:intergenic
ACAAGATTCATGCCGTTGCC+AGG 0.482217 contig271end:-165598 MsG0080048314.01.T01:CDS
GCTTGTCGCTGAGATCTTCA+AGG 0.482469 contig271end:-160609 MsG0080048314.01.T01:CDS
TGACAGTGATGATGAAGAAT+CGG 0.482629 contig271end:-165259 MsG0080048314.01.T01:CDS
TCTTGTCTTCCCTTTCCGAC+AGG 0.485818 contig271end:+165615 None:intergenic
TGATCTGGTGGATTCAGATC+TGG 0.487281 contig271end:-160582 MsG0080048314.01.T01:CDS
GATCTTCAAGGAGATTGATC+TGG 0.489212 contig271end:-160597 MsG0080048314.01.T01:CDS
CAGCCAACGCCACATACAAA+AGG 0.491192 contig271end:-165156 MsG0080048314.01.T01:CDS
AATGAGTTGTGGGATTTGGT+TGG 0.494085 contig271end:-169298 MsG0080048314.01.T01:CDS
ATATGGGTTGGGTGTGAAAG+TGG 0.494088 contig271end:-169269 MsG0080048314.01.T01:CDS
CAGTGGAATTTAGACAAAGC+AGG 0.497895 contig271end:-165492 MsG0080048314.01.T01:CDS
GCTGAAGTGCCCGAATGGAC+TGG 0.499421 contig271end:-165723 MsG0080048314.01.T01:CDS
GTCGGCTTGTTGATTAGAGA+TGG 0.499813 contig271end:+160635 None:intergenic
AAGTCAAAATGGAAGTCTTA+CGG 0.503873 contig271end:-168545 MsG0080048314.01.T01:CDS
TCAAGAGTGTATACGGATGT+AGG 0.504450 contig271end:-169057 MsG0080048314.01.T01:CDS
AGCGCAGAGGATACCAGAAC+AGG 0.504565 contig271end:-165299 MsG0080048314.01.T01:CDS
TCATGCTGTAATGGAAATGA+TGG 0.505785 contig271end:+160532 None:intergenic
CCGTCCTTCACATCTCTCCT+TGG 0.506025 contig271end:+163539 None:intergenic
CCATGTATGATGATAACCTT+GGG 0.511627 contig271end:-165926 MsG0080048314.01.T01:CDS
AGAACATTGGTGCCGTCTAT+GGG 0.512645 contig271end:-167197 MsG0080048314.01.T01:CDS
CTGCTTTGTCTAAATTCCAC+TGG 0.513826 contig271end:+165493 None:intergenic
TAAGATTGTAATTTGTCCCA+AGG 0.519599 contig271end:+165910 None:intergenic
CCTTGCACCGCCATTTCTGA+TGG 0.520716 contig271end:+163229 None:intergenic
TCTCTTTATTAACACTAGAT+GGG 0.523442 contig271end:+168674 None:intergenic
GGATCCGATTCATGCTGTAA+TGG 0.524408 contig271end:+160523 None:intergenic
GAAAAGCGCTAGACTCAAGC+TGG 0.525180 contig271end:-165535 MsG0080048314.01.T01:CDS
ATAGCCCTCAATCGAGGCAA+AGG 0.526152 contig271end:+167129 None:intergenic
TGTCCAAAAGCACCCTTCAA+TGG 0.528458 contig271end:+165228 None:intergenic
TGAGACTAGTCTCAGAAAGT+TGG 0.532476 contig271end:-168832 MsG0080048314.01.T01:intron
AGGCATGCTGTTTGCTACAT+CGG 0.534517 contig271end:+168771 None:intergenic
GTTGCAGGCGGAGTTGGTGT+TGG 0.535127 contig271end:-169113 MsG0080048314.01.T01:CDS
TACTTCTCCTTAGGAAGCCA+AGG 0.536333 contig271end:-163556 MsG0080048314.01.T01:intron
GAAGGGGAACCTGTCGGAAA+GGG 0.537473 contig271end:-165624 MsG0080048314.01.T01:CDS
AAGAATTGATTCTGGAACAC+AGG 0.538056 contig271end:+165789 None:intergenic
CTCACAGTGAATATCCCTCT+CGG 0.538527 contig271end:-165759 MsG0080048314.01.T01:CDS
TGAGTTGTGGGATTTGGTTG+GGG 0.538551 contig271end:-169296 MsG0080048314.01.T01:CDS
AACACCTGATTCCGAAGCTA+AGG 0.538928 contig271end:-165827 MsG0080048314.01.T01:CDS
TTGCTTCCATCTGACAATCC+AGG 0.540122 contig271end:+168751 None:intergenic
TCACACATTTAGTGTTTGAA+GGG 0.541437 contig271end:+163502 None:intergenic
CGCACATATCTACAGAAACA+TGG 0.544597 contig271end:-162480 MsG0080048314.01.T01:intron
ACTCGACAGAACCCTGTACC+TGG 0.548252 contig271end:+165580 None:intergenic
ATCTCAGCGACAAGCTTCGT+CGG 0.549703 contig271end:+160617 None:intergenic
ATCAAGCTGAAGTGCCCGAA+TGG 0.549788 contig271end:-165728 MsG0080048314.01.T01:CDS
TGTTTGTAAGAATGAGTTGT+GGG 0.550138 contig271end:-169308 MsG0080048314.01.T01:CDS
GTCAGCCATCAAACGTGGCA+TGG 0.553840 contig271end:+167164 None:intergenic
CAACGGATCAAACGTGACAA+TGG 0.554887 contig271end:-165885 MsG0080048314.01.T01:CDS
ATCTGACCGTCGAAGATCCA+TGG 0.555176 contig271end:-162444 MsG0080048314.01.T01:CDS
GGAAGGGGAACCTGTCGGAA+AGG 0.556040 contig271end:-165625 MsG0080048314.01.T01:CDS
CGTTGGCTGTGGCTTCTTAG+GGG 0.558699 contig271end:+165170 None:intergenic
TCACAGTGAATATCCCTCTC+GGG 0.560991 contig271end:-165758 MsG0080048314.01.T01:CDS
TTGTTGATGGTCAAGTTGCA+GGG 0.564028 contig271end:-162411 MsG0080048314.01.T01:intron
CTTCAAGGAGATTGATCTGG+TGG 0.566156 contig271end:-160594 MsG0080048314.01.T01:CDS
CTTGATGGTTTGGCCCGAGA+GGG 0.566622 contig271end:+165745 None:intergenic
TAGCCCTCAATCGAGGCAAA+GGG 0.567377 contig271end:+167130 None:intergenic
CTCACAAGAGTGATTCTAAG+TGG 0.569925 contig271end:-165695 MsG0080048314.01.T01:CDS
TATGGGTTGGGTGTGAAAGT+GGG 0.570602 contig271end:-169268 MsG0080048314.01.T01:CDS
AATGATGACGCCAATGAAAG+TGG 0.572125 contig271end:-168718 MsG0080048314.01.T01:CDS
TGGTAACCAAAATGCTGCAA+TGG 0.573167 contig271end:-168812 MsG0080048314.01.T01:CDS
TCCATGTATGATGATAACCT+TGG 0.573234 contig271end:-165927 MsG0080048314.01.T01:CDS
GGTGCCGTCTATGGGAATCA+AGG 0.576529 contig271end:-167189 MsG0080048314.01.T01:CDS
GAAGCCAAGGAGAGATGTGA+AGG 0.581170 contig271end:-163543 MsG0080048314.01.T01:CDS
CCATCAGAAATGGCGGTGCA+AGG 0.582258 contig271end:-163229 MsG0080048314.01.T01:intron
TCATGCCGTTGCCAGGTACA+GGG 0.583742 contig271end:-165591 MsG0080048314.01.T01:CDS
CCATCAACGACATTCTTCAA+AGG 0.584134 contig271end:+169196 None:intergenic
TTCCCGAAGCGTGATTTAGT+GGG 0.584624 contig271end:-169169 MsG0080048314.01.T01:CDS
AGTGGAATTTAGACAAAGCA+GGG 0.585551 contig271end:-165491 MsG0080048314.01.T01:CDS
AAGAGTGATTCTAAGTGGCT+GGG 0.587117 contig271end:-165690 MsG0080048314.01.T01:CDS
TAATCACGAGATCTGGAAGA+AGG 0.592207 contig271end:-168522 MsG0080048314.01.T01:CDS
TGGCGATGATGTCTTGATGT+TGG 0.595435 contig271end:-168698 MsG0080048314.01.T01:CDS
GGTTGGGGAAGAATATGGGT+TGG 0.595753 contig271end:-169281 MsG0080048314.01.T01:CDS
GTGTTGGATGATTATGGTGA+GGG 0.596430 contig271end:-169097 MsG0080048314.01.T01:CDS
AGCATGCCTGGATTGTCAGA+TGG 0.597266 contig271end:-168757 MsG0080048314.01.T01:CDS
CAAATTACAATCTTAGACAA+CGG 0.597787 contig271end:-165902 MsG0080048314.01.T01:CDS
AACATCTATCAAGCGAAGCA+GGG 0.599897 contig271end:+165403 None:intergenic
TCAACAAACCAAGGACGCCA+TGG 0.602984 contig271end:+162427 None:intergenic
TAAGCTGTTCATGGTGGTGA+AGG 0.604654 contig271end:-169350 MsG0080048314.01.T01:CDS
GCGTTTAACGGAGTTGCAGG+CGG 0.610457 contig271end:-169125 MsG0080048314.01.T01:CDS
TCGGAATTTACACCATTGAA+GGG 0.611362 contig271end:-165240 MsG0080048314.01.T01:CDS
ACAAAGCAGGGGAAGAAGTG+AGG 0.617748 contig271end:-165479 MsG0080048314.01.T01:CDS
AGGTTATCATCATACATGGA+AGG 0.619750 contig271end:+165930 None:intergenic
GCTTGATGGTTTGGCCCGAG+AGG 0.620538 contig271end:+165744 None:intergenic
AACATTTCCTAAGAAGAGCA+GGG 0.628463 contig271end:-165361 MsG0080048314.01.T01:CDS
TTGTTTGTAAGAATGAGTTG+TGG 0.633971 contig271end:-169309 MsG0080048314.01.T01:CDS
CAGAACCCTGTACCTGGCAA+CGG 0.636700 contig271end:+165586 None:intergenic
AGCAACACCATCAGAAATGG+CGG 0.637936 contig271end:-163236 MsG0080048314.01.T01:CDS
CCAAGGAGAGATGTGAAGGA+CGG 0.648906 contig271end:-163539 MsG0080048314.01.T01:CDS
ATATCTACAGAAACATGGAT+AGG 0.653238 contig271end:-162475 MsG0080048314.01.T01:intron
GGAACCTTGATTCCCATAGA+CGG 0.656159 contig271end:+167185 None:intergenic
TTATGGTGAGGGAGATGTCG+GGG 0.658460 contig271end:-169086 MsG0080048314.01.T01:CDS
CAATCTAGAAGAGTTCTCAA+AGG 0.664492 contig271end:-163290 MsG0080048314.01.T01:CDS
GGCTTGTTGATTAGAGATGG+CGG 0.664937 contig271end:+160638 None:intergenic
TTCATGGTGGTGAAGGACAA+AGG 0.665997 contig271end:-169343 MsG0080048314.01.T01:CDS
ACTTGACCATCAACAAACCA+AGG 0.668412 contig271end:+162418 None:intergenic
AGGACGCCATGGATCTTCGA+CGG 0.669351 contig271end:+162438 None:intergenic
GAAACAATAGCCCTCAATCG+AGG 0.681490 contig271end:+167123 None:intergenic
GTGTGATACTAATAGAGTGA+AGG 0.682936 contig271end:-169026 MsG0080048314.01.T01:intron
GGTGTTGGATGATTATGGTG+AGG 0.685208 contig271end:-169098 MsG0080048314.01.T01:CDS
ACTCAAGCTGGAATATAGTG+TGG 0.685937 contig271end:-165523 MsG0080048314.01.T01:CDS
CGAGAGGGATATTCACTGTG+AGG 0.690565 contig271end:+165760 None:intergenic
GGTCTGTCAGCCATCAAACG+TGG 0.691487 contig271end:+167159 None:intergenic
ACTGATTGAGGTCAGAACAT+TGG 0.691535 contig271end:-167210 MsG0080048314.01.T01:intron
ACGGATCAAACGTGACAATG+GGG 0.705546 contig271end:-165883 MsG0080048314.01.T01:CDS
GTTTATAGTAAGTATCTGAG+TGG 0.710441 contig271end:-169229 MsG0080048314.01.T01:CDS
GGGCGATAGAGTTAAGTTTG+GGG 0.715012 contig271end:-169149 MsG0080048314.01.T01:CDS
GTGGAATTTAGACAAAGCAG+GGG 0.723671 contig271end:-165490 MsG0080048314.01.T01:CDS
AGCACTTCAAGAGATCAATG+AGG 0.744256 contig271end:-163478 MsG0080048314.01.T01:intron
TTTGTATAAGCTGTTCATGG+TGG 0.747724 contig271end:-169356 MsG0080048314.01.T01:CDS
ATGGTGGTGAAGGACAAAGG+TGG 0.772486 contig271end:-169340 MsG0080048314.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATACAAAAATAATCA+TGG - contig271end:166225-166244 MsG0080048314.01.T01:intron 10.0%
!! ATTATATAATAATATTAACC+TGG + contig271end:166753-166772 None:intergenic 10.0%
!! ATTATATTTATTACATGTTA+AGG - contig271end:167077-167096 MsG0080048314.01.T01:intron 10.0%
!! TAATGTCTTTAAATTAAAAA+AGG + contig271end:163222-163241 None:intergenic 10.0%
!! TTATATTTATTACATGTTAA+GGG - contig271end:167078-167097 MsG0080048314.01.T01:intron 10.0%
!!! CTTTATCTTTTATTTATTTA+TGG - contig271end:161730-161749 MsG0080048314.01.T01:intron 10.0%
!! AAAAATGATATTAATGTGTT+TGG - contig271end:166519-166538 MsG0080048314.01.T01:intron 15.0%
!! ATATTATGAATGAAATAAAG+AGG + contig271end:162230-162249 None:intergenic 15.0%
!! ATATTATTAGATCATACAAT+AGG + contig271end:161885-161904 None:intergenic 15.0%
!! ATTAATTAATAAATGAGTGA+TGG + contig271end:166720-166739 None:intergenic 15.0%
!! ATTTATGTTTAAATGCATTT+AGG - contig271end:166163-166182 MsG0080048314.01.T01:intron 15.0%
!! GTTATGAAAAAATGTTAATT+TGG - contig271end:162192-162211 MsG0080048314.01.T01:intron 15.0%
!! TAAAATTTGAATTCTCTATT+TGG - contig271end:162389-162408 MsG0080048314.01.T01:intron 15.0%
!! TAATTAATTAATATTTCACC+AGG - contig271end:166732-166751 MsG0080048314.01.T01:intron 15.0%
!! TATATTTATTACATGTTAAG+GGG - contig271end:167079-167098 MsG0080048314.01.T01:intron 15.0%
!! TTATAGTAAAATAAACATAG+TGG + contig271end:166131-166150 None:intergenic 15.0%
!! TTTATGTTTAAATGCATTTA+GGG - contig271end:166164-166183 MsG0080048314.01.T01:intron 15.0%
!! TTTATTAGTCAAAATTAACA+AGG + contig271end:166898-166917 None:intergenic 15.0%
!!! AAATTCAAAATTTTGAATTG+TGG + contig271end:163052-163071 None:intergenic 15.0%
!!! ACAAATTTTGATAGTTTTTA+TGG - contig271end:166488-166507 MsG0080048314.01.T01:intron 15.0%
!!! ATTCAATTTGTCTATTTTAT+CGG + contig271end:168564-168583 None:intergenic 15.0%
!!! GTTTAGTATGATTTTTTTTT+TGG + contig271end:168341-168360 None:intergenic 15.0%
!!! TATCAATGAAGTATTTAATT+TGG + contig271end:163002-163021 None:intergenic 15.0%
!!! TTTTATGCTTTCTTATATAT+GGG - contig271end:166794-166813 MsG0080048314.01.T01:intron 15.0%
!!! TTTTTTTATAACCATGTTAT+AGG + contig271end:162154-162173 None:intergenic 15.0%
!!! TTTTTTTTCTTTGTAAATTG+TGG + contig271end:167217-167236 None:intergenic 15.0%
!! AAAAAGTTTCATATTACTTG+GGG + contig271end:162541-162560 None:intergenic 20.0%
!! AAAAGAGAATAAACATACTA+AGG + contig271end:162255-162274 None:intergenic 20.0%
!! AAAATTACAGGATTAAGTTA+TGG + contig271end:161763-161782 None:intergenic 20.0%
!! AAGATTCATCATTACTATTA+GGG + contig271end:166084-166103 None:intergenic 20.0%
!! AAGTAATTATACTTTCTACA+TGG - contig271end:165327-165346 MsG0080048314.01.T01:CDS 20.0%
!! AATGATATTTCCATTGTTTA+TGG - contig271end:168087-168106 MsG0080048314.01.T01:intron 20.0%
!! AATTTATAGTGCTTATTATG+TGG + contig271end:162356-162375 None:intergenic 20.0%
!! ACCCTTTAAATAGTTTATAT+GGG - contig271end:165368-165387 MsG0080048314.01.T01:CDS 20.0%
!! ATAAGACAGTAACATAAATT+TGG + contig271end:163686-163705 None:intergenic 20.0%
!! ATATTACATTGAAGATTGAA+CGG + contig271end:161848-161867 None:intergenic 20.0%
!! ATATTTATTACATGTTAAGG+GGG - contig271end:167080-167099 MsG0080048314.01.T01:intron 20.0%
!! ATTATAATGCTAATGACAAA+AGG + contig271end:161621-161640 None:intergenic 20.0%
!! ATTTCTGATAACTAATTCTA+AGG - contig271end:168897-168916 MsG0080048314.01.T01:intron 20.0%
!! CAAAAAGTTTCATATTACTT+GGG + contig271end:162542-162561 None:intergenic 20.0%
!! GAAAAAATCAATACTTGATA+AGG - contig271end:161955-161974 MsG0080048314.01.T01:intron 20.0%
!! TCCCATATAAACTATTTAAA+GGG + contig271end:165372-165391 None:intergenic 20.0%
!! TTGCAAATAATATCTTACAA+TGG + contig271end:168170-168189 None:intergenic 20.0%
!! TTTATGCTTTCTTATATATG+GGG - contig271end:166795-166814 MsG0080048314.01.T01:intron 20.0%
!!! AAATAACCCATTTTGTTATA+TGG - contig271end:168769-168788 MsG0080048314.01.T01:CDS 20.0%
!!! AACAATTTTTCTGTATCAAA+TGG - contig271end:164857-164876 MsG0080048314.01.T01:intron 20.0%
!!! AAGTAACACATTTTGTTATA+TGG + contig271end:168965-168984 None:intergenic 20.0%
!!! ACTTTATCTCTCTATTTTTT+TGG + contig271end:167258-167277 None:intergenic 20.0%
!!! ATACAATGTGGAAATTTTTT+AGG - contig271end:165255-165274 MsG0080048314.01.T01:CDS 20.0%
!!! ATGATTTTATATTCTATGCA+AGG + contig271end:164889-164908 None:intergenic 20.0%
!!! GATGTTTGAAATATAATGTA+GGG - contig271end:161527-161546 MsG0080048314.01.T01:intron 20.0%
!!! GTTTTATGCTTTCTTATATA+TGG - contig271end:166793-166812 MsG0080048314.01.T01:intron 20.0%
!!! GTTTTGTTTATAAAGACATT+TGG + contig271end:162855-162874 None:intergenic 20.0%
!!! TAAAATCATCATTGCTATTA+AGG - contig271end:164900-164919 MsG0080048314.01.T01:intron 20.0%
!!! TATGTGTAAATTGTTTTGTA+AGG + contig271end:168594-168613 None:intergenic 20.0%
!!! TATTTTCTGTTATTTTCATC+AGG + contig271end:169159-169178 None:intergenic 20.0%
!!! TGATGTTTGAAATATAATGT+AGG - contig271end:161526-161545 MsG0080048314.01.T01:intron 20.0%
! AAAACATCGAATTGTGTATA+GGG - contig271end:166915-166934 MsG0080048314.01.T01:intron 25.0%
! AAAAGTAGACTAAAAAACCT+AGG + contig271end:165954-165973 None:intergenic 25.0%
! AAAGTAGACTAAAAAACCTA+GGG + contig271end:165953-165972 None:intergenic 25.0%
! AATTATTCTGTCTATCACAT+TGG - contig271end:163453-163472 MsG0080048314.01.T01:intron 25.0%
! ACAAGTAAAAACAAAGCTTT+AGG - contig271end:168646-168665 MsG0080048314.01.T01:intron 25.0%
! ACACAACAATTTATTGTAGA+TGG - contig271end:165164-165183 MsG0080048314.01.T01:CDS 25.0%
! ATAAAGGATAAAACTGCAAA+TGG + contig271end:162470-162489 None:intergenic 25.0%
! ATCAATGTTATTAAGTTTCG+AGG - contig271end:167147-167166 MsG0080048314.01.T01:CDS 25.0%
! ATTACAAAGTCCATAAACAA+TGG + contig271end:168100-168119 None:intergenic 25.0%
! ATTTAATGTTACTGTGTGTT+TGG - contig271end:163158-163177 MsG0080048314.01.T01:intron 25.0%
! CAAATTACAATCTTAGACAA+CGG - contig271end:164012-164031 MsG0080048314.01.T01:intron 25.0%
! CCAAAAAGTTTCATATTACT+TGG + contig271end:162543-162562 None:intergenic 25.0%
! CTATATATATACTTCTCCTT+AGG - contig271end:166349-166368 MsG0080048314.01.T01:intron 25.0%
! CTCCCATATAAACTATTTAA+AGG + contig271end:165373-165392 None:intergenic 25.0%
! CTTTAAATAGTTTATATGGG+AGG - contig271end:165371-165390 MsG0080048314.01.T01:CDS 25.0%
! GAAGATTCATCATTACTATT+AGG + contig271end:166085-166104 None:intergenic 25.0%
! GAATCAATCTATAGAATCTA+AGG + contig271end:163407-163426 None:intergenic 25.0%
! GACCCTTTAAATAGTTTATA+TGG - contig271end:165367-165386 MsG0080048314.01.T01:CDS 25.0%
! TAAAACATCGAATTGTGTAT+AGG - contig271end:166914-166933 MsG0080048314.01.T01:intron 25.0%
! TAATAAATGAGTGATGGTTA+TGG + contig271end:166714-166733 None:intergenic 25.0%
! TAATAACACGACAAATCAAA+GGG - contig271end:167836-167855 MsG0080048314.01.T01:intron 25.0%
! TATCAAAAGCTATCTTAGTT+TGG + contig271end:165508-165527 None:intergenic 25.0%
! TCTCTTTATTAACACTAGAT+GGG + contig271end:161243-161262 None:intergenic 25.0%
! TTAACCAACAGACATAAATT+TGG + contig271end:167884-167903 None:intergenic 25.0%
! TTACACATACAAGCAAATAA+TGG - contig271end:168605-168624 MsG0080048314.01.T01:intron 25.0%
! TTTAATGTTACTGTGTGTTT+GGG - contig271end:163159-163178 MsG0080048314.01.T01:intron 25.0%
!! AATGCCTTAAAGTAAAGTTT+TGG - contig271end:165788-165807 MsG0080048314.01.T01:CDS 25.0%
!! AGGACTAATAAAGATTGTTT+TGG - contig271end:164920-164939 MsG0080048314.01.T01:intron 25.0%
!! ATGCCTTAAAGTAAAGTTTT+GGG - contig271end:165789-165808 MsG0080048314.01.T01:CDS 25.0%
!! ATTCTAAGGAACTCTAATTT+AGG - contig271end:168911-168930 MsG0080048314.01.T01:intron 25.0%
!! ATTGAAGAAATTTCCTGTTT+TGG - contig271end:163835-163854 MsG0080048314.01.T01:intron 25.0%
!! CCAAGTAATATGAAACTTTT+TGG - contig271end:162540-162559 MsG0080048314.01.T01:intron 25.0%
!! TTATGTTACTGTCTTATTGA+AGG - contig271end:163689-163708 MsG0080048314.01.T01:intron 25.0%
!!! AACTTCTATTGCTTTTTTTC+TGG + contig271end:163519-163538 None:intergenic 25.0%
!!! AACTTTCTTCTACCATTTTT+AGG - contig271end:163947-163966 MsG0080048314.01.T01:intron 25.0%
!!! AATAAAGATTGTTTTGGTGT+AGG - contig271end:164926-164945 MsG0080048314.01.T01:intron 25.0%
!!! ACTACTTTTAACTAACTGTA+AGG + contig271end:168836-168855 None:intergenic 25.0%
!!! ATAAAGATTGTTTTGGTGTA+GGG - contig271end:164927-164946 MsG0080048314.01.T01:intron 25.0%
!!! ATTTGGAATTTTGGATGAAA+AGG + contig271end:167680-167699 None:intergenic 25.0%
!!! CTTTTGCTGATTTATTTTTG+AGG - contig271end:163101-163120 MsG0080048314.01.T01:intron 25.0%
!!! GCAGTTTTATCCTTTATAAA+AGG - contig271end:162473-162492 MsG0080048314.01.T01:intron 25.0%
!!! GGCATATTATTTTTGCAAAT+GGG + contig271end:161811-161830 None:intergenic 25.0%
!!! TAATGAAGTGCCTTTTATAA+AGG + contig271end:162486-162505 None:intergenic 25.0%
!!! TCCAAAATCTTTTTTCAGAA+AGG + contig271end:161439-161458 None:intergenic 25.0%
!!! TTTGATTTGTCGTGTTATTA+CGG + contig271end:167836-167855 None:intergenic 25.0%
!!! TTTGGAATTTTGGATGAAAA+GGG + contig271end:167679-167698 None:intergenic 25.0%
!!! TTTGTTTTTACCTTGTTGAA+TGG - contig271end:161693-161712 MsG0080048314.01.T01:intron 25.0%
AAAATACATACGTGATGCAA+TGG - contig271end:162170-162189 MsG0080048314.01.T01:intron 30.0%
AAATGCATTTAGGGAATGAT+AGG - contig271end:166173-166192 MsG0080048314.01.T01:intron 30.0%
AAGGTATATGAGTACATTGA+TGG - contig271end:160945-160964 MsG0080048314.01.T01:intron 30.0%
AAGTATAATTACTTGCCAGT+TGG + contig271end:165321-165340 None:intergenic 30.0%
AAGTCAAAATGGAAGTCTTA+CGG - contig271end:161369-161388 MsG0080048314.01.T01:intron 30.0%
AATGGTTTACTCAAAATCTC+TGG + contig271end:168152-168171 None:intergenic 30.0%
AATGTTTGAGAGTTTAGAAG+GGG - contig271end:165582-165601 MsG0080048314.01.T01:CDS 30.0%
AGATTTGTATAAGCTGTTCA+TGG - contig271end:160555-160574 MsG0080048314.01.T01:CDS 30.0%
AGCAGATTAAAGAGGAAAAA+TGG + contig271end:167976-167995 None:intergenic 30.0%
AGGTATATGAGTACATTGAT+GGG - contig271end:160946-160965 MsG0080048314.01.T01:intron 30.0%
AGTAATCAAGCAGATTAAAG+AGG + contig271end:167984-168003 None:intergenic 30.0%
AGTGTTAATAAAGAGAGCTT+TGG - contig271end:161247-161266 MsG0080048314.01.T01:intron 30.0%
ATAGAATGTTGCAAATGTTC+TGG - contig271end:166560-166579 MsG0080048314.01.T01:intron 30.0%
ATATCTACAGAAACATGGAT+AGG - contig271end:167439-167458 MsG0080048314.01.T01:intron 30.0%
ATCTTAAAATGACATCAGCT+AGG + contig271end:168022-168041 None:intergenic 30.0%
ATGCATAATACATGTTGAGT+TGG + contig271end:161922-161941 None:intergenic 30.0%
ATTGATAGAACTACCTACAT+GGG - contig271end:161981-162000 MsG0080048314.01.T01:intron 30.0%
CAATGTTTGAGAGTTTAGAA+GGG - contig271end:165581-165600 MsG0080048314.01.T01:CDS 30.0%
CACTCTTGTATGAAAGATAT+TGG + contig271end:168363-168382 None:intergenic 30.0%
CAGTTAGTTAAAAGTAGTGA+CGG - contig271end:168838-168857 MsG0080048314.01.T01:intron 30.0%
CATCTGCCATATAACAAAAT+GGG + contig271end:168778-168797 None:intergenic 30.0%
CATTACTATTAGGGTATGTA+TGG + contig271end:166075-166094 None:intergenic 30.0%
CTCTCTTTATTAACACTAGA+TGG + contig271end:161244-161263 None:intergenic 30.0%
CTTCTAGATTGTGTATCATT+TGG + contig271end:166615-166634 None:intergenic 30.0%
GATTCATTTAGACAAGGTAT+GGG - contig271end:165549-165568 MsG0080048314.01.T01:CDS 30.0%
GTAATAACACGACAAATCAA+AGG - contig271end:167835-167854 MsG0080048314.01.T01:intron 30.0%
GTTTATAGTAAGTATCTGAG+TGG - contig271end:160685-160704 MsG0080048314.01.T01:intron 30.0%
TACTTTGATCTATACTGTAG+TGG - contig271end:167391-167410 MsG0080048314.01.T01:intron 30.0%
TAGAATTCTCTTCCAACTTA+AGG - contig271end:165647-165666 MsG0080048314.01.T01:CDS 30.0%
TAGGTACTTAAGAGAAGAAT+AGG - contig271end:165989-166008 MsG0080048314.01.T01:intron 30.0%
TATAGGGAAGAGTAAAAGAA+TGG - contig271end:166931-166950 MsG0080048314.01.T01:intron 30.0%
TATATCAGACAGTCTCTATA+AGG - contig271end:166264-166283 MsG0080048314.01.T01:intron 30.0%
TCAAGGTAACATCAGAAAAA+GGG + contig271end:163741-163760 None:intergenic 30.0%
TCAATCTATAGAATCTAAGG+TGG + contig271end:163404-163423 None:intergenic 30.0%
TCACAAATTCAGACTGAATT+TGG + contig271end:167697-167716 None:intergenic 30.0%
TCACACATTTAGTGTTTGAA+GGG + contig271end:166415-166434 None:intergenic 30.0%
TCATCTGCCATATAACAAAA+TGG + contig271end:168779-168798 None:intergenic 30.0%
TGATTCATTTAGACAAGGTA+TGG - contig271end:165548-165567 MsG0080048314.01.T01:CDS 30.0%
TGTCTGATATAAGTGTCAAT+CGG + contig271end:166255-166274 None:intergenic 30.0%
TGTGTAGGAAACTTACATTA+AGG + contig271end:169251-169270 None:intergenic 30.0%
TGTTTGTAAGAATGAGTTGT+GGG - contig271end:160606-160625 MsG0080048314.01.T01:CDS 30.0%
TTAACTGTTGCATAAGTCAA+CGG + contig271end:167796-167815 None:intergenic 30.0%
TTAGGATATTCAAATACGCT+AGG - contig271end:165827-165846 MsG0080048314.01.T01:CDS 30.0%
TTATAGAAGACCAAAGTATG+AGG + contig271end:163544-163563 None:intergenic 30.0%
TTATGTGGCACAAAAACTTA+TGG + contig271end:162341-162360 None:intergenic 30.0%
TTCAAGGTAACATCAGAAAA+AGG + contig271end:163742-163761 None:intergenic 30.0%
TTCACACATTTAGTGTTTGA+AGG + contig271end:166416-166435 None:intergenic 30.0%
TTCTTCTCTTAAGTACCTAT+TGG + contig271end:165988-166007 None:intergenic 30.0%
TTGTTTGAGTAAGATTCTTC+TGG + contig271end:167019-167038 None:intergenic 30.0%
TTGTTTGTAAGAATGAGTTG+TGG - contig271end:160605-160624 MsG0080048314.01.T01:CDS 30.0%
TTTGAATTTATCACATTCGC+AGG - contig271end:163063-163082 MsG0080048314.01.T01:intron 30.0%
! AATCGTAAAATCCGAACTTT+TGG - contig271end:164268-164287 MsG0080048314.01.T01:intron 30.0%
! ATTGAACGGTACATCTATTT+TGG + contig271end:161834-161853 None:intergenic 30.0%
! GTGCTATTATAGATAAGCAT+TGG - contig271end:168380-168399 MsG0080048314.01.T01:intron 30.0%
! TAAGATTGTAATTTGTCCCA+AGG + contig271end:164007-164026 None:intergenic 30.0%
! TGTTATTTGAACACCCATTT+GGG - contig271end:167172-167191 MsG0080048314.01.T01:CDS 30.0%
! TTATGTCTGTTGGTTAAACA+GGG - contig271end:167887-167906 MsG0080048314.01.T01:intron 30.0%
! TTGAACGGTACATCTATTTT+GGG + contig271end:161833-161852 None:intergenic 30.0%
! TTGCATGGATATTTTCTTGA+AGG - contig271end:165427-165446 MsG0080048314.01.T01:CDS 30.0%
! TTGCCAATGTTATTTGATGT+TGG - contig271end:161594-161613 MsG0080048314.01.T01:intron 30.0%
! TTTATGTCTGTTGGTTAAAC+AGG - contig271end:167886-167905 MsG0080048314.01.T01:intron 30.0%
!! AGAAAAGTTATTTCTAGGAG+GGG - contig271end:165850-165869 MsG0080048314.01.T01:CDS 30.0%
!! ATTGCTGATTCATTTAGACA+AGG - contig271end:165543-165562 MsG0080048314.01.T01:CDS 30.0%
!! CTAGGAGAAAAGTTATTTCT+AGG - contig271end:165845-165864 MsG0080048314.01.T01:CDS 30.0%
!! CTTAGTTTGGATGTTTTCTA+TGG + contig271end:165495-165514 None:intergenic 30.0%
!! GAGAAAAGTTATTTCTAGGA+GGG - contig271end:165849-165868 MsG0080048314.01.T01:CDS 30.0%
!! GATTGTGTATCATTTGGTTT+TGG + contig271end:166609-166628 None:intergenic 30.0%
!! GCCTTTCTGAAAAAAGATTT+TGG - contig271end:161435-161454 MsG0080048314.01.T01:intron 30.0%
!! GCTGAAGTTCAAGTTAATTT+TGG + contig271end:165206-165225 None:intergenic 30.0%
!! GCTTTGAAATGTTTGAAAGA+TGG - contig271end:167948-167967 MsG0080048314.01.T01:intron 30.0%
!! GGATGTTTTTCAATACAATG+TGG - contig271end:165243-165262 MsG0080048314.01.T01:CDS 30.0%
!! TAAAATCCGAACTTTTGGAA+GGG - contig271end:164273-164292 MsG0080048314.01.T01:intron 30.0%
!! TCAGACTGAATTTGGAATTT+TGG + contig271end:167689-167708 None:intergenic 30.0%
!!! GGGCATATTATTTTTGCAAA+TGG + contig271end:161812-161831 None:intergenic 30.0%
AAAAGCAACACCATCAGAAA+TGG - contig271end:166675-166694 MsG0080048314.01.T01:intron 35.0%
AAAAGCCTTGAAAGAGTTTC+TGG - contig271end:168509-168528 MsG0080048314.01.T01:CDS 35.0%
AAACACAACATCCATGACTA+CGG + contig271end:161665-161684 None:intergenic 35.0%
AAATGCTGCAATGGAGATAA+TGG - contig271end:161111-161130 MsG0080048314.01.T01:intron 35.0%
AACATTTCCTAAGAAGAGCA+GGG - contig271end:164553-164572 MsG0080048314.01.T01:intron 35.0%
AAGATTCTTCTGGTAGTCAA+TGG + contig271end:167009-167028 None:intergenic 35.0%
AATGTAAAGGGTAATTCCCT+AGG - contig271end:165934-165953 MsG0080048314.01.T01:CDS 35.0%
ACAATGAAGCTCATGATTTG+AGG + contig271end:164802-164821 None:intergenic 35.0%
ACAATTGCATTTCATGTGAC+AGG - contig271end:163650-163669 MsG0080048314.01.T01:intron 35.0%
ACCTTGTTGAATGGTTGTTA+GGG - contig271end:161702-161721 MsG0080048314.01.T01:intron 35.0%
ACTAACCAGAAACTCTTTCA+AGG + contig271end:168517-168536 None:intergenic 35.0%
ACTCTTGATTCAATGATACC+AGG + contig271end:163924-163943 None:intergenic 35.0%
AGGTTATCATCATACATGGA+AGG + contig271end:163987-164006 None:intergenic 35.0%
AGTCTATACGAAGTATGGAT+TGG - contig271end:168458-168477 MsG0080048314.01.T01:CDS 35.0%
AGTGGAATTTAGACAAAGCA+GGG - contig271end:164423-164442 MsG0080048314.01.T01:intron 35.0%
ATCGGAATTTACACCATTGA+AGG - contig271end:164673-164692 MsG0080048314.01.T01:intron 35.0%
ATGACATCAGCTAGGAAATT+TGG + contig271end:168014-168033 None:intergenic 35.0%
ATGTAAGTTTCCTACACAGA+TGG - contig271end:169253-169272 MsG0080048314.01.T01:CDS 35.0%
ATGTTACCTTGAAACAACAG+AGG - contig271end:163749-163768 MsG0080048314.01.T01:intron 35.0%
ATTATCCTCAATGTAGAGAC+AGG + contig271end:168213-168232 None:intergenic 35.0%
ATTTGGTTGGGGAAGAATAT+GGG - contig271end:160629-160648 MsG0080048314.01.T01:CDS 35.0%
CAAGTCCAATATTCCAACAT+AGG - contig271end:167767-167786 MsG0080048314.01.T01:intron 35.0%
CAATCTAGAAGAGTTCTCAA+AGG - contig271end:166624-166643 MsG0080048314.01.T01:intron 35.0%
CAATGCCTGAAAAGTCAAAA+TGG - contig271end:161358-161377 MsG0080048314.01.T01:intron 35.0%
CACGAATCTTGTGTCTAATA+TGG - contig271end:161001-161020 MsG0080048314.01.T01:intron 35.0%
CAGCTTTCTGAGTTTCTATA+TGG - contig271end:165222-165241 MsG0080048314.01.T01:CDS 35.0%
CCATGTATGATGATAACCTT+GGG - contig271end:163988-164007 MsG0080048314.01.T01:intron 35.0%
CCTCCCAAAACTTTACTTTA+AGG + contig271end:165795-165814 None:intergenic 35.0%
CTAAAAGCCTCACATTGTAT+GGG - contig271end:162821-162840 MsG0080048314.01.T01:intron 35.0%
CTGGTGAAATGTGTAACTAA+GGG + contig271end:165099-165118 None:intergenic 35.0%
GAAGACATGAAACTAAATGC+TGG - contig271end:167858-167877 MsG0080048314.01.T01:intron 35.0%
GAAGAGTAAAAGAATGGTAC+AGG - contig271end:166937-166956 MsG0080048314.01.T01:intron 35.0%
GAGACATTGTAGTTTACCTT+CGG - contig271end:167543-167562 MsG0080048314.01.T01:intron 35.0%
GATAAAAGAGTTGTAGGAAG+TGG - contig271end:165606-165625 MsG0080048314.01.T01:CDS 35.0%
GATACTTCGTACCTATAACA+TGG - contig271end:162140-162159 MsG0080048314.01.T01:intron 35.0%
GATGGAGAGAGTAAAATTAC+AGG + contig271end:161775-161794 None:intergenic 35.0%
GATGTCAGAAATGCAAAGTT+GGG - contig271end:161294-161313 MsG0080048314.01.T01:intron 35.0%
GATTGATAGAACTACCTACA+TGG - contig271end:161980-161999 MsG0080048314.01.T01:intron 35.0%
GCAATGTTTGAGAGTTTAGA+AGG - contig271end:165580-165599 MsG0080048314.01.T01:CDS 35.0%
GGACCAACATCAAATAACAT+TGG + contig271end:161600-161619 None:intergenic 35.0%
GGTATCCTATGTTGGAATAT+TGG + contig271end:167775-167794 None:intergenic 35.0%
GTCTAAATTCCACTGGTAAA+AGG + contig271end:164417-164436 None:intergenic 35.0%
GTCTGGCACTAATAAAATGA+AGG - contig271end:160977-160996 MsG0080048314.01.T01:intron 35.0%
GTGTGATACTAATAGAGTGA+AGG - contig271end:160888-160907 MsG0080048314.01.T01:intron 35.0%
GTTATTTGAACACCCATTTG+GGG - contig271end:167173-167192 MsG0080048314.01.T01:CDS 35.0%
TAAGAATGAGTTGTGGGATT+TGG - contig271end:160612-160631 MsG0080048314.01.T01:CDS 35.0%
TACACAGTCTATACGAAGTA+TGG - contig271end:168453-168472 MsG0080048314.01.T01:CDS 35.0%
TACCTTGTTGAATGGTTGTT+AGG - contig271end:161701-161720 MsG0080048314.01.T01:intron 35.0%
TAGAAGTTTGCCTCATACTT+TGG - contig271end:163531-163550 MsG0080048314.01.T01:CDS 35.0%
TATATGAGTACATTGATGGG+AGG - contig271end:160949-160968 MsG0080048314.01.T01:intron 35.0%
TCATCACTGTCAATGTTATC+AGG + contig271end:164647-164666 None:intergenic 35.0%
TCCATCAACACAAAAACAGT+TGG + contig271end:168724-168743 None:intergenic 35.0%
TCCATGTATGATGATAACCT+TGG - contig271end:163987-164006 MsG0080048314.01.T01:intron 35.0%
TCGGAATTTACACCATTGAA+GGG - contig271end:164674-164693 MsG0080048314.01.T01:intron 35.0%
TGTGGCTTAACTTATATGTG+TGG - contig271end:166462-166481 MsG0080048314.01.T01:intron 35.0%
TGTGTAACTAAGGGAATATG+TGG + contig271end:165090-165109 None:intergenic 35.0%
TGTTACCTTGAAACAACAGA+GGG - contig271end:163750-163769 MsG0080048314.01.T01:intron 35.0%
TTCATTGCTACACTTGTAAC+AGG + contig271end:166206-166225 None:intergenic 35.0%
TTCGCTTGATAGATGTTTCT+GGG - contig271end:164517-164536 MsG0080048314.01.T01:intron 35.0%
TTGATAGAACTACCTACATG+GGG - contig271end:161982-162001 MsG0080048314.01.T01:intron 35.0%
TTTCTATGGACGGAGTTAAA+TGG + contig271end:165481-165500 None:intergenic 35.0%
TTTGTATAAGCTGTTCATGG+TGG - contig271end:160558-160577 MsG0080048314.01.T01:CDS 35.0%
TTTGTCTAAATATTGCCACC+TGG - contig271end:163903-163922 MsG0080048314.01.T01:intron 35.0%
! ATAGAATCTAAGGTGGTGTT+TGG + contig271end:163397-163416 None:intergenic 35.0%
! GAGTAACTTTTCCTTAGCTT+CGG + contig271end:164101-164120 None:intergenic 35.0%
! GATGAAGTCAAGAGTGTATA+CGG - contig271end:160850-160869 MsG0080048314.01.T01:intron 35.0%
! GCAATATTTTCCATGATGCA+TGG + contig271end:161578-161597 None:intergenic 35.0%
! GGGATTTCTAAAAGGAATCT+AGG - contig271end:165870-165889 MsG0080048314.01.T01:CDS 35.0%
! GTAAAATCCGAACTTTTGGA+AGG - contig271end:164272-164291 MsG0080048314.01.T01:intron 35.0%
! GTTGACTTATGCAACAGTTA+AGG - contig271end:167795-167814 MsG0080048314.01.T01:intron 35.0%
! GTTTGGATGTTTTCTATGGA+CGG + contig271end:165491-165510 None:intergenic 35.0%
! TACCTTTTCTATATGCCAAC+TGG - contig271end:165303-165322 MsG0080048314.01.T01:CDS 35.0%
! TAGAATCTAAGGTGGTGTTT+GGG + contig271end:163396-163415 None:intergenic 35.0%
! TCATGCTGTAATGGAAATGA+TGG + contig271end:169385-169404 None:intergenic 35.0%
! TGAACGGTACATCTATTTTG+GGG + contig271end:161832-161851 None:intergenic 35.0%
! TGACAGTGATGATGAAGAAT+CGG - contig271end:164655-164674 MsG0080048314.01.T01:intron 35.0%
! TTATCTCCATTGCAGCATTT+TGG + contig271end:161111-161130 None:intergenic 35.0%
! TTTTGATCTACCTTGCCAAT+AGG - contig271end:165970-165989 MsG0080048314.01.T01:intron 35.0%
!! AAAATCCGAACTTTTGGAAG+GGG - contig271end:164274-164293 MsG0080048314.01.T01:intron 35.0%
!! AAGAATTGATTCTGGAACAC+AGG + contig271end:164128-164147 None:intergenic 35.0%
!! AGGATACTTTGAAACTACGT+TGG + contig271end:169139-169158 None:intergenic 35.0%
!! AGTGTATCAAGAGGTTTTGA+GGG - contig271end:165893-165912 MsG0080048314.01.T01:CDS 35.0%
!! ATACACACACATTCAAGTTG+AGG + contig271end:163579-163598 None:intergenic 35.0%
!! GGAGAAAAGTTATTTCTAGG+AGG - contig271end:165848-165867 MsG0080048314.01.T01:CDS 35.0%
!! GTGTTATTTGAACACCCATT+TGG - contig271end:167171-167190 MsG0080048314.01.T01:CDS 35.0%
!! TACACACACATTCAAGTTGA+GGG + contig271end:163578-163597 None:intergenic 35.0%
!! TATGAAACTTTTTGGTGTGC+CGG - contig271end:162548-162567 MsG0080048314.01.T01:intron 35.0%
!! TTATGAGGTATTGTCTGCTT+GGG - contig271end:162438-162457 MsG0080048314.01.T01:CDS 35.0%
!! TTTCCTGTTTTGGATGATAG+AGG - contig271end:163845-163864 MsG0080048314.01.T01:intron 35.0%
!!! ATTTCTGATGGTGTTGCTTT+TGG + contig271end:166676-166695 None:intergenic 35.0%
!!! CCTTAAAGTAAAGTTTTGGG+AGG - contig271end:165792-165811 MsG0080048314.01.T01:CDS 35.0%
!!! GACTTCCATTTTGACTTTTC+AGG + contig271end:161366-161385 None:intergenic 35.0%
!!! TGTGGAAATTTTTTAGGCTC+AGG - contig271end:165261-165280 MsG0080048314.01.T01:CDS 35.0%
AAAACAGTTGGCAATGCATG+TGG + contig271end:168712-168731 None:intergenic 40.0%
AAACACAGTGATGTGACTTG+AGG - contig271end:162947-162966 MsG0080048314.01.T01:intron 40.0%
AAACATCTATCAAGCGAAGC+AGG + contig271end:164515-164534 None:intergenic 40.0%
AAACTTTCCCTGCTCTTCTT+AGG + contig271end:164563-164582 None:intergenic 40.0%
AAAGAGTTGTAGGAAGTGGA+AGG - contig271end:165610-165629 MsG0080048314.01.T01:CDS 40.0%
AAAGTCCTGTCTCTACATTG+AGG - contig271end:168205-168224 MsG0080048314.01.T01:intron 40.0%
AACATCTATCAAGCGAAGCA+GGG + contig271end:164514-164533 None:intergenic 40.0%
AACCCCTTACCATTTGCTTA+AGG + contig271end:162035-162054 None:intergenic 40.0%
AACGGATCAAACGTGACAAT+GGG - contig271end:164030-164049 MsG0080048314.01.T01:intron 40.0%
AAGAGATCAATGAGGTTCTG+TGG - contig271end:166444-166463 MsG0080048314.01.T01:intron 40.0%
AAGAGTGATTCTAAGTGGCT+GGG - contig271end:164224-164243 MsG0080048314.01.T01:intron 40.0%
AAGTCAACGGTATCCTATGT+TGG + contig271end:167783-167802 None:intergenic 40.0%
AATCGAGGCAAAGGGATTAA+GGG + contig271end:162779-162798 None:intergenic 40.0%
AATCTCTGTTGGGTACAAGA+TGG + contig271end:162107-162126 None:intergenic 40.0%
ACATAAGTTGTCACCCCAAA+TGG + contig271end:167189-167208 None:intergenic 40.0%
ACTCAAGCTGGAATATAGTG+TGG - contig271end:164391-164410 MsG0080048314.01.T01:intron 40.0%
ACTGATTGAGGTCAGAACAT+TGG - contig271end:162704-162723 MsG0080048314.01.T01:intron 40.0%
ACTTGACCATCAACAAACCA+AGG + contig271end:167499-167518 None:intergenic 40.0%
AGACCTCTATCATCCAAAAC+AGG + contig271end:163851-163870 None:intergenic 40.0%
AGAGCCTTAAGCAAATGGTA+AGG - contig271end:162028-162047 MsG0080048314.01.T01:intron 40.0%
AGCACTTCAAGAGATCAATG+AGG - contig271end:166436-166455 MsG0080048314.01.T01:intron 40.0%
AGCCTTAAGCAAATGGTAAG+GGG - contig271end:162030-162049 MsG0080048314.01.T01:intron 40.0%
AGGGGAGATAAAAGAGTTGT+AGG - contig271end:165600-165619 MsG0080048314.01.T01:CDS 40.0%
AGGTATTCTGTGACTGATTG+AGG - contig271end:162692-162711 MsG0080048314.01.T01:intron 40.0%
AGTGTTATGCACCTCAAGTT+GGG - contig271end:165761-165780 MsG0080048314.01.T01:CDS 40.0%
ATCTTGTACCCAACAGAGAT+TGG - contig271end:162106-162125 MsG0080048314.01.T01:intron 40.0%
ATTGAGGCTAAGGGAGTAAA+GGG - contig271end:162584-162603 MsG0080048314.01.T01:intron 40.0%
ATTTCACCAGGTTGTGACAA+GGG - contig271end:165109-165128 MsG0080048314.01.T01:intron 40.0%
CAAAAACTTATGGCACATCG+CGG + contig271end:162331-162350 None:intergenic 40.0%
CAACATTTCCTAAGAAGAGC+AGG - contig271end:164552-164571 MsG0080048314.01.T01:intron 40.0%
CAAGCAGACAATACCTCATA+AGG + contig271end:162439-162458 None:intergenic 40.0%
CACTGTTAAAAAACTGCGTC+AGG - contig271end:165138-165157 MsG0080048314.01.T01:intron 40.0%
CAGTGGAATTTAGACAAAGC+AGG - contig271end:164422-164441 MsG0080048314.01.T01:intron 40.0%
CATAAGGAGAATACCCAGTT+GGG - contig271end:162071-162090 MsG0080048314.01.T01:intron 40.0%
CATAAGTTGTCACCCCAAAT+GGG + contig271end:167188-167207 None:intergenic 40.0%
CCATCAACGACATTCTTCAA+AGG + contig271end:160721-160740 None:intergenic 40.0%
CCCAAGGTTATCATCATACA+TGG + contig271end:163991-164010 None:intergenic 40.0%
CCTAAAAGCCTCACATTGTA+TGG - contig271end:162820-162839 MsG0080048314.01.T01:intron 40.0%
CCTGGTGAAATGTGTAACTA+AGG + contig271end:165100-165119 None:intergenic 40.0%
CCTTAGTTACACATTTCACC+AGG - contig271end:165097-165116 MsG0080048314.01.T01:intron 40.0%
CCTTGTTGAATGGTTGTTAG+GGG - contig271end:161703-161722 MsG0080048314.01.T01:intron 40.0%
CGATGTCAGAAATGCAAAGT+TGG - contig271end:161293-161312 MsG0080048314.01.T01:intron 40.0%
CGCACATATCTACAGAAACA+TGG - contig271end:167434-167453 MsG0080048314.01.T01:intron 40.0%
CTCACAAGAGTGATTCTAAG+TGG - contig271end:164219-164238 MsG0080048314.01.T01:intron 40.0%
CTCTTAAGTACCTATTGGCA+AGG + contig271end:165983-166002 None:intergenic 40.0%
CTGCTTTGTCTAAATTCCAC+TGG + contig271end:164424-164443 None:intergenic 40.0%
CTGGCCAAATTTATGTCTGT+TGG - contig271end:167877-167896 MsG0080048314.01.T01:intron 40.0%
CTTCGCTTGATAGATGTTTC+TGG - contig271end:164516-164535 MsG0080048314.01.T01:intron 40.0%
CTTGATTCAATGATACCAGG+TGG + contig271end:163921-163940 None:intergenic 40.0%
CTTGTTGAATGGTTGTTAGG+GGG - contig271end:161704-161723 MsG0080048314.01.T01:intron 40.0%
GAGCCTTAAGCAAATGGTAA+GGG - contig271end:162029-162048 MsG0080048314.01.T01:intron 40.0%
GATCTTCAAGGAGATTGATC+TGG - contig271end:169317-169336 MsG0080048314.01.T01:CDS 40.0%
GTGGAATTTAGACAAAGCAG+GGG - contig271end:164424-164443 MsG0080048314.01.T01:intron 40.0%
GTGTTGGATGATTATGGTGA+GGG - contig271end:160817-160836 MsG0080048314.01.T01:intron 40.0%
TAATCACGAGATCTGGAAGA+AGG - contig271end:161392-161411 MsG0080048314.01.T01:intron 40.0%
TAGTGTTATGCACCTCAAGT+TGG - contig271end:165760-165779 MsG0080048314.01.T01:CDS 40.0%
TATTGAGGCTAAGGGAGTAA+AGG - contig271end:162583-162602 MsG0080048314.01.T01:intron 40.0%
TCCAACAGAGTATAACAGCA+GGG - contig271end:167922-167941 MsG0080048314.01.T01:intron 40.0%
TCCTTCACTCTCAACTTTCT+TGG + contig271end:161027-161046 None:intergenic 40.0%
TCGATTGAGGGCTATTGTTT+CGG - contig271end:162793-162812 MsG0080048314.01.T01:intron 40.0%
TCTAGGAGGGGATTTCTAAA+AGG - contig271end:165862-165881 MsG0080048314.01.T01:CDS 40.0%
TGATAAAGTGGCGCATGTAT+TGG + contig271end:169032-169051 None:intergenic 40.0%
TGCATTTAGGGAATGATAGG+TGG - contig271end:166176-166195 MsG0080048314.01.T01:intron 40.0%
TGCCAGTTGGCATATAGAAA+AGG + contig271end:165308-165327 None:intergenic 40.0%
TGGCTTCTTAGGGGATAATA+AGG + contig271end:164738-164757 None:intergenic 40.0%
TGGGAGGAGTCAATTGTATT+TGG - contig271end:165387-165406 MsG0080048314.01.T01:CDS 40.0%
TGGGCGATAGAGTTAAGTTT+GGG - contig271end:160764-160783 MsG0080048314.01.T01:intron 40.0%
TGGTAACCAAAATGCTGCAA+TGG - contig271end:161102-161121 MsG0080048314.01.T01:intron 40.0%
TGTATTCATGTCCGTAGTCA+TGG - contig271end:161651-161670 MsG0080048314.01.T01:intron 40.0%
TTACTCCCTTAGCCTCAATA+GGG + contig271end:162583-162602 None:intergenic 40.0%
TTACTTGGGGATCGAGTTTA+AGG + contig271end:162528-162547 None:intergenic 40.0%
TTCTCTTCCAACTTAAGGAG+TGG - contig271end:165652-165671 MsG0080048314.01.T01:CDS 40.0%
TTTACTCCCTTAGCCTCAAT+AGG + contig271end:162584-162603 None:intergenic 40.0%
! AAGAGAGCTTTGGTCGTAAA+AGG - contig271end:161257-161276 MsG0080048314.01.T01:intron 40.0%
! AATGAGTTGTGGGATTTGGT+TGG - contig271end:160616-160635 MsG0080048314.01.T01:CDS 40.0%
! AATGATGACGCCAATGAAAG+TGG - contig271end:161196-161215 MsG0080048314.01.T01:intron 40.0%
! AGCTGTCTTCCTTTTGTATG+TGG + contig271end:164770-164789 None:intergenic 40.0%
! ATAGAGTGAAGGTGTGAATC+CGG - contig271end:160899-160918 MsG0080048314.01.T01:intron 40.0%
! ATGAGTTGTGGGATTTGGTT+GGG - contig271end:160617-160636 MsG0080048314.01.T01:CDS 40.0%
! ATTGGCGGTTTTTGTGTTGA+TGG + contig271end:169014-169033 None:intergenic 40.0%
! CATTCCTGCAGTGTCATTAA+GGG + contig271end:166038-166057 None:intergenic 40.0%
! CCATACAATGTGAGGCTTTT+AGG + contig271end:162823-162842 None:intergenic 40.0%
! CCTTTGAAGAATGTCGTTGA+TGG - contig271end:160718-160737 MsG0080048314.01.T01:intron 40.0%
! GAATCTAGGAGTGTATCAAG+AGG - contig271end:165884-165903 MsG0080048314.01.T01:CDS 40.0%
! GAGTGTATCAAGAGGTTTTG+AGG - contig271end:165892-165911 MsG0080048314.01.T01:CDS 40.0%
! GATTTGGTTGGGGAAGAATA+TGG - contig271end:160628-160647 MsG0080048314.01.T01:CDS 40.0%
! GGGAGGAGTTAGAATGTTTT+AGG - contig271end:165809-165828 MsG0080048314.01.T01:CDS 40.0%
! GGTGATAGTCTTGCACAATT+GGG + contig271end:166588-166607 None:intergenic 40.0%
! GGTGCATCAAGAATTGATTC+TGG + contig271end:164136-164155 None:intergenic 40.0%
! TCAAGAGTGTATACGGATGT+AGG - contig271end:160857-160876 MsG0080048314.01.T01:intron 40.0%
! TCATTCCTGCAGTGTCATTA+AGG + contig271end:166039-166058 None:intergenic 40.0%
! TCGGATTTTACGATTTGCAG+TGG + contig271end:164263-164282 None:intergenic 40.0%
! TGCTTGTTTCGTCTTTTGCA+TGG - contig271end:165412-165431 MsG0080048314.01.T01:CDS 40.0%
! TGGTGATAGTCTTGCACAAT+TGG + contig271end:166589-166608 None:intergenic 40.0%
! TTTTCCTTAGCTTCGGAATC+AGG + contig271end:164094-164113 None:intergenic 40.0%
!! AGAAGCACTTCATGTTAGAG+AGG - contig271end:166837-166856 MsG0080048314.01.T01:intron 40.0%
!! CTTATGAGGTATTGTCTGCT+TGG - contig271end:162437-162456 MsG0080048314.01.T01:CDS 40.0%
!! GAGTTGGTGTTGGATGATTA+TGG - contig271end:160811-160830 MsG0080048314.01.T01:intron 40.0%
!! TAAGTTTGGGGAGCGTTTAA+CGG - contig271end:160777-160796 MsG0080048314.01.T01:intron 40.0%
!! TCTACCATTTTTAGGCTCAG+AGG - contig271end:163955-163974 MsG0080048314.01.T01:intron 40.0%
!! TCTTTCAAGGCTTTTCGAGA+TGG + contig271end:168504-168523 None:intergenic 40.0%
!! TGAGACTAGTCTCAGAAAGT+TGG - contig271end:161082-161101 MsG0080048314.01.T01:intron 40.0%
!! TTCGAGGTATTGTCCACTTT+GGG + contig271end:162928-162947 None:intergenic 40.0%
!! TTGTCTATTTTATCGGCTGC+AGG + contig271end:168557-168576 None:intergenic 40.0%
!! TTGTTGATGGTCAAGTTGCA+GGG - contig271end:167503-167522 MsG0080048314.01.T01:intron 40.0%
!! TTTCGAGGTATTGTCCACTT+TGG + contig271end:162929-162948 None:intergenic 40.0%
!! TTTGTTGATGGTCAAGTTGC+AGG - contig271end:167502-167521 MsG0080048314.01.T01:intron 40.0%
!! TTTTGACTGGCATTCTCAAC+TGG + contig271end:169108-169127 None:intergenic 40.0%
!!! GCCAACTGTTTTTGTGTTGA+TGG - contig271end:168720-168739 MsG0080048314.01.T01:CDS 40.0%
!!! GTGTATCAAGAGGTTTTGAG+GGG - contig271end:165894-165913 MsG0080048314.01.T01:CDS 40.0%
!!! GTTGGTGATGTGTTTTTGAC+TGG + contig271end:169121-169140 None:intergenic 40.0%
!!! TCTGGCTTTTTTGTTGAGCT+TGG + contig271end:163501-163520 None:intergenic 40.0%
!!! TGTTGCTTTTGGAACTGCAA+TGG + contig271end:166665-166684 None:intergenic 40.0%
AAAAGATGCTGCCTTTGTGG+TGG - contig271end:164963-164982 MsG0080048314.01.T01:intron 45.0%
AAAGGAAGACAGCTAGTGCA+TGG - contig271end:164776-164795 MsG0080048314.01.T01:intron 45.0%
AACACCTGATTCCGAAGCTA+AGG - contig271end:164087-164106 MsG0080048314.01.T01:intron 45.0%
AAGTGGAAGGATGAAGGGAA+AGG - contig271end:165623-165642 MsG0080048314.01.T01:CDS 45.0%
AATCCCTTTGCCTCGATTGA+GGG - contig271end:162781-162800 MsG0080048314.01.T01:intron 45.0%
ACAGTGATGTGACTTGAGGT+CGG - contig271end:162951-162970 MsG0080048314.01.T01:intron 45.0%
ACGGATCAAACGTGACAATG+GGG - contig271end:164031-164050 MsG0080048314.01.T01:intron 45.0%
ACTAGTTGACGTGCTTATGC+AGG - contig271end:161046-161065 MsG0080048314.01.T01:intron 45.0%
ACTCGAGAGCCTTAAGCAAA+TGG - contig271end:162023-162042 MsG0080048314.01.T01:intron 45.0%
AGCAACACCATCAGAAATGG+CGG - contig271end:166678-166697 MsG0080048314.01.T01:intron 45.0%
AGCCTCACATTGTATGGGAA+TGG - contig271end:162826-162845 MsG0080048314.01.T01:intron 45.0%
AGGCATTCTAACCCAACTTG+AGG + contig271end:165775-165794 None:intergenic 45.0%
AGGTTCCCCTTCCAAAAGTT+CGG + contig271end:164282-164301 None:intergenic 45.0%
AGTGGAAGGATGAAGGGAAA+GGG - contig271end:165624-165643 MsG0080048314.01.T01:CDS 45.0%
AGTGGCTGGGAACTCAAATA+TGG - contig271end:164237-164256 MsG0080048314.01.T01:intron 45.0%
AGTTCAGTCGCATTCAACTC+CGG + contig271end:160921-160940 None:intergenic 45.0%
ATTATGGTGAGGGAGATGTC+GGG - contig271end:160827-160846 MsG0080048314.01.T01:intron 45.0%
ATTGATGGGAGGAAGATGTC+TGG - contig271end:160960-160979 MsG0080048314.01.T01:intron 45.0%
CAACGGATCAAACGTGACAA+TGG - contig271end:164029-164048 MsG0080048314.01.T01:intron 45.0%
CAAGAGTGATTCTAAGTGGC+TGG - contig271end:164223-164242 MsG0080048314.01.T01:intron 45.0%
CAATCGAGGCAAAGGGATTA+AGG + contig271end:162780-162799 None:intergenic 45.0%
CAGACTGTGAAAAACTCAGC+TGG - contig271end:161460-161479 MsG0080048314.01.T01:intron 45.0%
CAGTCACAGAATACCTCGAA+AGG + contig271end:162688-162707 None:intergenic 45.0%
CATACCCTTAATGACACTGC+AGG - contig271end:166031-166050 MsG0080048314.01.T01:intron 45.0%
CATTGTGCATGGCTTAAACC+CGG - contig271end:162616-162635 MsG0080048314.01.T01:intron 45.0%
CATTTCACCAGGTTGTGACA+AGG - contig271end:165108-165127 MsG0080048314.01.T01:intron 45.0%
CCAACTTAAGGAGTGGAAGA+AGG - contig271end:165659-165678 MsG0080048314.01.T01:CDS 45.0%
CCCCTAACAACCATTCAACA+AGG + contig271end:161706-161725 None:intergenic 45.0%
CCCTTTACATTACCTCCTAG+CGG + contig271end:165925-165944 None:intergenic 45.0%
CCGCTAGGAGGTAATGTAAA+GGG - contig271end:165922-165941 MsG0080048314.01.T01:CDS 45.0%
CCTTCTTCCACTCCTTAAGT+TGG + contig271end:165662-165681 None:intergenic 45.0%
CGGTCACAAATTCAGTCACT+TGG - contig271end:167563-167582 MsG0080048314.01.T01:intron 45.0%
CTCACAGTGAATATCCCTCT+CGG - contig271end:164155-164174 MsG0080048314.01.T01:intron 45.0%
CTCACATTGTATGGGAATGG+AGG - contig271end:162829-162848 MsG0080048314.01.T01:intron 45.0%
CTCCAACAGAGTATAACAGC+AGG - contig271end:167921-167940 MsG0080048314.01.T01:intron 45.0%
CTCCATTCCCATACAATGTG+AGG + contig271end:162831-162850 None:intergenic 45.0%
CTTACGGTAATCACGAGATC+TGG - contig271end:161385-161404 MsG0080048314.01.T01:intron 45.0%
CTTCAAGGAGATTGATCTGG+TGG - contig271end:169320-169339 MsG0080048314.01.T01:CDS 45.0%
GAAACAATAGCCCTCAATCG+AGG + contig271end:162794-162813 None:intergenic 45.0%
GAATCCTTGTGATCCTGTGT+AGG - contig271end:161333-161352 MsG0080048314.01.T01:intron 45.0%
GAATGCGACTGAACTCGAAA+AGG - contig271end:160926-160945 MsG0080048314.01.T01:intron 45.0%
GATTATGGTGAGGGAGATGT+CGG - contig271end:160826-160845 MsG0080048314.01.T01:intron 45.0%
GCAGACAATACCTCATAAGG+TGG + contig271end:162436-162455 None:intergenic 45.0%
GCATAAGGAGAATACCCAGT+TGG - contig271end:162070-162089 MsG0080048314.01.T01:intron 45.0%
GCATACATCTCTCTCAAGGA+TGG - contig271end:169078-169097 MsG0080048314.01.T01:CDS 45.0%
GCATCCTCTGAGCCTAAAAA+TGG + contig271end:163962-163981 None:intergenic 45.0%
GCCAAGAAAGTTGAGAGTGA+AGG - contig271end:161023-161042 MsG0080048314.01.T01:intron 45.0%
GGAACCTTGATTCCCATAGA+CGG + contig271end:162732-162751 None:intergenic 45.0%
GGGCGATAGAGTTAAGTTTG+GGG - contig271end:160765-160784 MsG0080048314.01.T01:intron 45.0%
GGTAAAAGATGCTGCCTTTG+TGG - contig271end:164960-164979 MsG0080048314.01.T01:intron 45.0%
GTAGGAAGTGGAAGGATGAA+GGG - contig271end:165618-165637 MsG0080048314.01.T01:CDS 45.0%
GTGACTGAATTTGTGACCGA+AGG + contig271end:167562-167581 None:intergenic 45.0%
GTGGGCGATAGAGTTAAGTT+TGG - contig271end:160763-160782 MsG0080048314.01.T01:intron 45.0%
GTTACTGTGTGTTTGGGAAG+AGG - contig271end:163165-163184 MsG0080048314.01.T01:intron 45.0%
GTTGGGGAAGAATATGGGTT+GGG - contig271end:160634-160653 MsG0080048314.01.T01:CDS 45.0%
GTTTGGGAAGAGGTTTACGA+GGG - contig271end:163175-163194 MsG0080048314.01.T01:intron 45.0%
TAAAGTGGCGCATGTATTGG+CGG + contig271end:169029-169048 None:intergenic 45.0%
TAAGGTGGTGTTTGGGAAGA+GGG + contig271end:163389-163408 None:intergenic 45.0%
TAATCCCTTTGCCTCGATTG+AGG - contig271end:162780-162799 MsG0080048314.01.T01:intron 45.0%
TACCGTGACCAATCTCTGTT+GGG + contig271end:162117-162136 None:intergenic 45.0%
TACTTCTCCTTAGGAAGCCA+AGG - contig271end:166358-166377 MsG0080048314.01.T01:intron 45.0%
TAGTGGTGATCATGATCTCG+TGG - contig271end:167408-167427 MsG0080048314.01.T01:intron 45.0%
TCACAGAATACCTCGAAAGG+AGG + contig271end:162685-162704 None:intergenic 45.0%
TCACAGTGAATATCCCTCTC+GGG - contig271end:164156-164175 MsG0080048314.01.T01:intron 45.0%
TCCCTGCTGTTATACTCTGT+TGG + contig271end:167926-167945 None:intergenic 45.0%
TCTCCTTATGCAAGAGCCAA+GGG + contig271end:162061-162080 None:intergenic 45.0%
TGAACCTACACAGGATCACA+AGG + contig271end:161340-161359 None:intergenic 45.0%
TGGCGATGATGTCTTGATGT+TGG - contig271end:161216-161235 MsG0080048314.01.T01:intron 45.0%
TGGTGTGACGAACTAGAAGT+CGG + contig271end:162416-162435 None:intergenic 45.0%
TGTAGGAAGTGGAAGGATGA+AGG - contig271end:165617-165636 MsG0080048314.01.T01:CDS 45.0%
TGTTTGGGAAGAGGTTTACG+AGG - contig271end:163174-163193 MsG0080048314.01.T01:intron 45.0%
TTAAACCCGGTTCCCACAAA+TGG - contig271end:162629-162648 MsG0080048314.01.T01:intron 45.0%
TTCCCGAAGCGTGATTTAGT+GGG - contig271end:160745-160764 MsG0080048314.01.T01:intron 45.0%
TTCTCCTTATGCAAGAGCCA+AGG + contig271end:162062-162081 None:intergenic 45.0%
TTGAGAGAGATGTATGCAGC+CGG + contig271end:169075-169094 None:intergenic 45.0%
TTGCTTCCATCTGACAATCC+AGG + contig271end:161166-161185 None:intergenic 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG + contig271end:163379-163398 None:intergenic 45.0%
TTTGGGAAGAGGTTTACGAG+GGG - contig271end:163176-163195 MsG0080048314.01.T01:intron 45.0%
! AGGCATGCTGTTTGCTACAT+CGG + contig271end:161146-161165 None:intergenic 45.0%
! ATAGTGTGGCCTTTTACCAG+TGG - contig271end:164405-164424 MsG0080048314.01.T01:intron 45.0%
! ATGGATTTTCCACACCCAAC+TGG + contig271end:162088-162107 None:intergenic 45.0%
! ATGGGGTTGATTGAGTGGTA+AGG - contig271end:161999-162018 MsG0080048314.01.T01:intron 45.0%
! CTTCCTTTTGTATGTGGCGT+TGG + contig271end:164764-164783 None:intergenic 45.0%
! GACATCATCGCCACTTTCAT+TGG + contig271end:161209-161228 None:intergenic 45.0%
! GATAGAGGTCTTTTCGTAGC+TGG - contig271end:163860-163879 MsG0080048314.01.T01:intron 45.0%
! GGTGTTGGATGATTATGGTG+AGG - contig271end:160816-160835 MsG0080048314.01.T01:intron 45.0%
! GTCACATCACTGTGTTTTCG+AGG + contig271end:162944-162963 None:intergenic 45.0%
! TAAGCTGTTCATGGTGGTGA+AGG - contig271end:160564-160583 MsG0080048314.01.T01:CDS 45.0%
! TACCCAACAGAGATTGGTCA+CGG - contig271end:162112-162131 MsG0080048314.01.T01:intron 45.0%
! TATCAGGAGTATGCCTGTTC+TGG + contig271end:164631-164650 None:intergenic 45.0%
! TGAGTTGTGGGATTTGGTTG+GGG - contig271end:160618-160637 MsG0080048314.01.T01:CDS 45.0%
! TGGATTTTCCACACCCAACT+GGG + contig271end:162087-162106 None:intergenic 45.0%
! TGGGGTTGATTGAGTGGTAA+GGG - contig271end:162000-162019 MsG0080048314.01.T01:intron 45.0%
! TGTTGGTTAAACAGGGAGCA+GGG - contig271end:167894-167913 MsG0080048314.01.T01:intron 45.0%
! TTCATGGTGGTGAAGGACAA+AGG - contig271end:160571-160590 MsG0080048314.01.T01:CDS 45.0%
!! AGAACATTGGTGCCGTCTAT+GGG - contig271end:162717-162736 MsG0080048314.01.T01:intron 45.0%
!! ATATGGGTTGGGTGTGAAAG+TGG - contig271end:160645-160664 MsG0080048314.01.T01:CDS 45.0%
!! CGTGACAATGGGGTTTTAGT+TGG - contig271end:164041-164060 MsG0080048314.01.T01:intron 45.0%
!! GGCTTGTTGATTAGAGATGG+CGG + contig271end:169279-169298 None:intergenic 45.0%
!! GTCGGCTTGTTGATTAGAGA+TGG + contig271end:169282-169301 None:intergenic 45.0%
!! GTGAACCCTCTGTTGTTTCA+AGG + contig271end:163758-163777 None:intergenic 45.0%
!! TATGGGTTGGGTGTGAAAGT+GGG - contig271end:160646-160665 MsG0080048314.01.T01:intron 45.0%
!! TGATCTGGTGGATTCAGATC+TGG - contig271end:169332-169351 MsG0080048314.01.T01:CDS 45.0%
!! TGTCCAAAAGCACCCTTCAA+TGG + contig271end:164689-164708 None:intergenic 45.0%
!! TTATCGGCTGCAGGTTTTGA+TGG + contig271end:168548-168567 None:intergenic 45.0%
!! TTCAGGCATTGAACCTACAC+AGG + contig271end:161349-161368 None:intergenic 45.0%
!!! ACACCATTGAAGGGTGCTTT+TGG - contig271end:164683-164702 MsG0080048314.01.T01:intron 45.0%
AACGAGGCGGACAAAACCAT+GGG - contig271end:162889-162908 MsG0080048314.01.T01:intron 50.0%
ACAAAGCAGGGGAAGAAGTG+AGG - contig271end:164435-164454 MsG0080048314.01.T01:intron 50.0%
ACAAGATTCATGCCGTTGCC+AGG - contig271end:164316-164335 MsG0080048314.01.T01:intron 50.0%
ACACACTCCTCAATCCAACG+AGG - contig271end:162873-162892 MsG0080048314.01.T01:intron 50.0%
AGCATGCCTGGATTGTCAGA+TGG - contig271end:161157-161176 MsG0080048314.01.T01:intron 50.0%
AGCTCACACAAGACCCAAAG+TGG - contig271end:162912-162931 MsG0080048314.01.T01:intron 50.0%
AGGTTCCATGCCACGTTTGA+TGG - contig271end:162745-162764 MsG0080048314.01.T01:intron 50.0%
ATAGCCCTCAATCGAGGCAA+AGG + contig271end:162788-162807 None:intergenic 50.0%
ATCTCAGCGACAAGCTTCGT+CGG + contig271end:169300-169319 None:intergenic 50.0%
ATCTGACCGTCGAAGATCCA+TGG - contig271end:167470-167489 MsG0080048314.01.T01:intron 50.0%
ATGCAACCCTTGTCACAACC+TGG + contig271end:165118-165137 None:intergenic 50.0%
ATGGGTCGCTCATTGTTGGA+TGG + contig271end:161793-161812 None:intergenic 50.0%
ATGGTAAGGGGTTTGACCCT+TGG - contig271end:162042-162061 MsG0080048314.01.T01:intron 50.0%
ATTCGGGCACTTCAGCTTGA+TGG + contig271end:164187-164206 None:intergenic 50.0%
CAGACTTGAGGTCGGAACAT+TGG + contig271end:162657-162676 None:intergenic 50.0%
CAGCCAACGCCACATACAAA+AGG - contig271end:164758-164777 MsG0080048314.01.T01:intron 50.0%
CATCTCTCCTTGGCTTCCTA+AGG + contig271end:166368-166387 None:intergenic 50.0%
CCAAGGAGAGATGTGAAGGA+CGG - contig271end:166375-166394 MsG0080048314.01.T01:intron 50.0%
CCACTCAATCAACCCCATGT+AGG + contig271end:161997-162016 None:intergenic 50.0%
CGAGAGGGATATTCACTGTG+AGG + contig271end:164157-164176 None:intergenic 50.0%
CGGGTTTAAGCCATGCACAA+TGG + contig271end:162618-162637 None:intergenic 50.0%
CTAAGGTGGTGTTTGGGAAG+AGG + contig271end:163390-163409 None:intergenic 50.0%
CTACCGTGACCAATCTCTGT+TGG + contig271end:162118-162137 None:intergenic 50.0%
CTGTGAAAAACTCAGCTGGC+TGG - contig271end:161464-161483 MsG0080048314.01.T01:intron 50.0%
CTTTATCAAAACCCCGACGC+AGG - contig271end:169044-169063 MsG0080048314.01.T01:CDS 50.0%
GAAGAGGTTTACGAGGGGAA+GGG - contig271end:163181-163200 MsG0080048314.01.T01:intron 50.0%
GAAGCCAAGGAGAGATGTGA+AGG - contig271end:166371-166390 MsG0080048314.01.T01:intron 50.0%
GAATACCTCGAAAGGAGGTG+TGG + contig271end:162680-162699 None:intergenic 50.0%
GATGTAGCAAACAGCATGCC+TGG - contig271end:161145-161164 MsG0080048314.01.T01:intron 50.0%
GCAAATGGGTCGCTCATTGT+TGG + contig271end:161797-161816 None:intergenic 50.0%
GCCGCTAGGAGGTAATGTAA+AGG - contig271end:165921-165940 MsG0080048314.01.T01:CDS 50.0%
GCTTGTCGCTGAGATCTTCA+AGG - contig271end:169305-169324 MsG0080048314.01.T01:CDS 50.0%
GGAACATTGGCGCCATTTGT+GGG + contig271end:162644-162663 None:intergenic 50.0%
GGCTGCATACATCTCTCTCA+AGG - contig271end:169074-169093 MsG0080048314.01.T01:CDS 50.0%
GGTCTGTCAACCATTGTGCA+TGG - contig271end:162605-162624 MsG0080048314.01.T01:intron 50.0%
GGTGTTTGGGAAGAGGGTTT+AGG + contig271end:163383-163402 None:intergenic 50.0%
GGTTGGGGAAGAATATGGGT+TGG - contig271end:160633-160652 MsG0080048314.01.T01:CDS 50.0%
GTGAGTTGTGCCAGTCCATT+CGG + contig271end:164204-164223 None:intergenic 50.0%
GTTAGCTGCTTCCACCACAA+AGG + contig271end:164977-164996 None:intergenic 50.0%
GTTCCCGAAGCGTGATTTAG+TGG - contig271end:160744-160763 MsG0080048314.01.T01:intron 50.0%
GTTCGTCACACCACCTTATG+AGG - contig271end:162423-162442 MsG0080048314.01.T01:CDS 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG + contig271end:163380-163399 None:intergenic 50.0%
TAGCCCTCAATCGAGGCAAA+GGG + contig271end:162787-162806 None:intergenic 50.0%
TATTGACACACCTAGCACGC+TGG - contig271end:167737-167756 MsG0080048314.01.T01:intron 50.0%
TCAACAAACCAAGGACGCCA+TGG + contig271end:167490-167509 None:intergenic 50.0%
TCGCCCACTAAATCACGCTT+CGG + contig271end:160751-160770 None:intergenic 50.0%
TCTTGTCTTCCCTTTCCGAC+AGG + contig271end:164302-164321 None:intergenic 50.0%
TGACACTGCAGGAATGAAGC+TGG - contig271end:166042-166061 MsG0080048314.01.T01:intron 50.0%
TGAGTTGTGCCAGTCCATTC+GGG + contig271end:164203-164222 None:intergenic 50.0%
TGTGCTGAGACCATGCATCA+TGG - contig271end:161565-161584 MsG0080048314.01.T01:intron 50.0%
TTATGGTGAGGGAGATGTCG+GGG - contig271end:160828-160847 MsG0080048314.01.T01:intron 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG + contig271end:163378-163397 None:intergenic 50.0%
TTGGTGTAGGGTCAGCTATG+AGG - contig271end:164939-164958 MsG0080048314.01.T01:intron 50.0%
! ACAGAGATTGGTCACGGTAG+TGG - contig271end:162118-162137 MsG0080048314.01.T01:intron 50.0%
! ATCAAGCTGAAGTGCCCGAA+TGG - contig271end:164186-164205 MsG0080048314.01.T01:intron 50.0%
! ATGGTGGTGAAGGACAAAGG+TGG - contig271end:160574-160593 MsG0080048314.01.T01:CDS 50.0%
! CCTACATGGGGTTGATTGAG+TGG - contig271end:161994-162013 MsG0080048314.01.T01:intron 50.0%
! CTGTTGGTTAAACAGGGAGC+AGG - contig271end:167893-167912 MsG0080048314.01.T01:intron 50.0%
! GGCACTTCAGCTTGATGGTT+TGG + contig271end:164182-164201 None:intergenic 50.0%
! GGGTGTGAAAGTGGGTTCTT+CGG - contig271end:160654-160673 MsG0080048314.01.T01:intron 50.0%
! GTCTTTCTTTTGCAGCGCAG+AGG - contig271end:164602-164621 MsG0080048314.01.T01:intron 50.0%
! TGACCCTTGGCTCTTGCATA+AGG - contig271end:162055-162074 MsG0080048314.01.T01:intron 50.0%
!! CAGAACATTGGTGCCGTCTA+TGG - contig271end:162716-162735 MsG0080048314.01.T01:intron 50.0%
!! CTTTTGGAAGGGGAACCTGT+CGG - contig271end:164284-164303 MsG0080048314.01.T01:intron 50.0%
!! GAAAAGCGCTAGACTCAAGC+TGG - contig271end:164379-164398 MsG0080048314.01.T01:intron 50.0%
!! GCGTCGGGGTTTTGATAAAG+TGG + contig271end:169044-169063 None:intergenic 50.0%
!! TGGCGTCCTTGGTTTGTTGA+TGG - contig271end:167490-167509 MsG0080048314.01.T01:intron 50.0%
!! TTTGTATGTGGCGTTGGCTG+TGG + contig271end:164758-164777 None:intergenic 50.0%
!! TTTTGAGGGGTATAGCCGCT+AGG - contig271end:165907-165926 MsG0080048314.01.T01:CDS 50.0%
ACTCGACAGAACCCTGTACC+TGG + contig271end:164337-164356 None:intergenic 55.0%
AGCAGGCCCTATTGAGGCTA+AGG - contig271end:162574-162593 MsG0080048314.01.T01:intron 55.0%
AGCGCAGAGGATACCAGAAC+AGG - contig271end:164615-164634 MsG0080048314.01.T01:intron 55.0%
AGGACGCCATGGATCTTCGA+CGG + contig271end:167479-167498 None:intergenic 55.0%
AGGGTTTAGGAGGGGAAGGA+GGG + contig271end:163370-163389 None:intergenic 55.0%
AGGTGTGGCAGACTTGAGGT+CGG + contig271end:162665-162684 None:intergenic 55.0%
AGGTTTACGAGGGGAAGGGA+GGG - contig271end:163185-163204 MsG0080048314.01.T01:intron 55.0%
CAACGAGGCGGACAAAACCA+TGG - contig271end:162888-162907 MsG0080048314.01.T01:intron 55.0%
CACTCCTCAATCCAACGAGG+CGG - contig271end:162876-162895 MsG0080048314.01.T01:intron 55.0%
CAGAACCCTGTACCTGGCAA+CGG + contig271end:164331-164350 None:intergenic 55.0%
CAGGTGCAACACAGTCTTGC+AGG - contig271end:166956-166975 MsG0080048314.01.T01:intron 55.0%
CCATCAGAAATGGCGGTGCA+AGG - contig271end:166685-166704 MsG0080048314.01.T01:intron 55.0%
CCGTCCTTCACATCTCTCCT+TGG + contig271end:166378-166397 None:intergenic 55.0%
CCTTGCACCGCCATTTCTGA+TGG + contig271end:166688-166707 None:intergenic 55.0%
CGCCCACTAAATCACGCTTC+GGG + contig271end:160750-160769 None:intergenic 55.0%
CGGAACATTGGCGCCATTTG+TGG + contig271end:162645-162664 None:intergenic 55.0%
CTCAATAGGGCCTGCTGTTC+CGG + contig271end:162570-162589 None:intergenic 55.0%
CTTCATCAAAACCCCGAGGC+AGG + contig271end:168687-168706 None:intergenic 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG + contig271end:163374-163393 None:intergenic 55.0%
GAAGGGGAACCTGTCGGAAA+GGG - contig271end:164290-164309 MsG0080048314.01.T01:intron 55.0%
GCAGGCCCTATTGAGGCTAA+GGG - contig271end:162575-162594 MsG0080048314.01.T01:intron 55.0%
GCGTTTAACGGAGTTGCAGG+CGG - contig271end:160789-160808 MsG0080048314.01.T01:intron 55.0%
GGAAGAGGTTTACGAGGGGA+AGG - contig271end:163180-163199 MsG0080048314.01.T01:intron 55.0%
GGAGAATACCCAGTTGGGTG+TGG - contig271end:162076-162095 MsG0080048314.01.T01:intron 55.0%
GGCACTTCATCAAAACCCCG+AGG + contig271end:168691-168710 None:intergenic 55.0%
GGTCTGTCAGCCATCAAACG+TGG + contig271end:162758-162777 None:intergenic 55.0%
GTCAGCCATCAAACGTGGCA+TGG + contig271end:162753-162772 None:intergenic 55.0%
TACATCCATTGCGCCTGCCT+CGG - contig271end:168671-168690 MsG0080048314.01.T01:intron 55.0%
TCATGCCGTTGCCAGGTACA+GGG - contig271end:164323-164342 MsG0080048314.01.T01:intron 55.0%
TCGAAGATCCATGGCGTCCT+TGG - contig271end:167479-167498 MsG0080048314.01.T01:intron 55.0%
TTCATGCCGTTGCCAGGTAC+AGG - contig271end:164322-164341 MsG0080048314.01.T01:intron 55.0%
TTGATACCTGCCAGCGTGCT+AGG + contig271end:167750-167769 None:intergenic 55.0%
TTGGCGCCATTTGTGGGAAC+CGG + contig271end:162638-162657 None:intergenic 55.0%
TTGTCCGCCTCGTTGGATTG+AGG + contig271end:162883-162902 None:intergenic 55.0%
TTTAGGAGGGGAAGGAGGGA+GGG + contig271end:163366-163385 None:intergenic 55.0%
! AAGGAGGTGTGGCAGACTTG+AGG + contig271end:162669-162688 None:intergenic 55.0%
! CGTTGGCTGTGGCTTCTTAG+GGG + contig271end:164747-164766 None:intergenic 55.0%
! CTTGATGGTTTGGCCCGAGA+GGG + contig271end:164172-164191 None:intergenic 55.0%
! GGAGCGTTTAACGGAGTTGC+AGG - contig271end:160786-160805 MsG0080048314.01.T01:intron 55.0%
! GGTGCCGTCTATGGGAATCA+AGG - contig271end:162725-162744 MsG0080048314.01.T01:intron 55.0%
!! GCGTTGGCTGTGGCTTCTTA+GGG + contig271end:164748-164767 None:intergenic 55.0%
!! TCGGCTGCAGGTTTTGATGG+TGG + contig271end:168545-168564 None:intergenic 55.0%
!! TTTTGGTGTGCCGGAACAGC+AGG - contig271end:162557-162576 MsG0080048314.01.T01:intron 55.0%
!!! CATGGTTTTGTCCGCCTCGT+TGG + contig271end:162890-162909 None:intergenic 55.0%
AACGGAGTTGCAGGCGGAGT+TGG - contig271end:160795-160814 MsG0080048314.01.T01:intron 60.0%
ACATCCATTGCGCCTGCCTC+GGG - contig271end:168672-168691 MsG0080048314.01.T01:intron 60.0%
CGGAACAGCAGGCCCTATTG+AGG - contig271end:162568-162587 MsG0080048314.01.T01:intron 60.0%
GAGGGTTTAGGAGGGGAAGG+AGG + contig271end:163371-163390 None:intergenic 60.0%
GAGGTTTACGAGGGGAAGGG+AGG - contig271end:163184-163203 MsG0080048314.01.T01:intron 60.0%
GGAAGGGGAACCTGTCGGAA+AGG - contig271end:164289-164308 MsG0080048314.01.T01:intron 60.0%
GGGAAGAAGTGAGGCGATGC+TGG - contig271end:164444-164463 MsG0080048314.01.T01:intron 60.0%
GGTTTACGAGGGGAAGGGAG+GGG - contig271end:163186-163205 MsG0080048314.01.T01:intron 60.0%
GTCTGCCACACCTCCTTTCG+AGG - contig271end:162672-162691 MsG0080048314.01.T01:intron 60.0%
GTTTAGGAGGGGAAGGAGGG+AGG + contig271end:163367-163386 None:intergenic 60.0%
TGGCGCCATTTGTGGGAACC+GGG + contig271end:162637-162656 None:intergenic 60.0%
! GAGATGGCGGCCATCTGTGT+AGG + contig271end:169266-169285 None:intergenic 60.0%
! GCTGAAGTGCCCGAATGGAC+TGG - contig271end:164191-164210 MsG0080048314.01.T01:intron 60.0%
! GCTTGATGGTTTGGCCCGAG+AGG + contig271end:164173-164192 None:intergenic 60.0%
! GGGTCTTGTGTGAGCTCCCA+TGG + contig271end:162908-162927 None:intergenic 60.0%
! TGAGGGGTATAGCCGCTAGG+AGG - contig271end:165910-165929 MsG0080048314.01.T01:CDS 60.0%
!! GGCGTTGGCTGTGGCTTCTT+AGG + contig271end:164749-164768 None:intergenic 60.0%
!! GTTGCAGGCGGAGTTGGTGT+TGG - contig271end:160801-160820 MsG0080048314.01.T01:intron 60.0%
AAACCCCGAGGCAGGCGCAA+TGG + contig271end:168679-168698 None:intergenic 65.0%
AACCCCGACGCAGGTGCAAC+CGG - contig271end:169053-169072 MsG0080048314.01.T01:CDS 65.0%
CATCCATTGCGCCTGCCTCG+GGG - contig271end:168673-168692 MsG0080048314.01.T01:intron 65.0%
GACACACCTAGCACGCTGGC+AGG - contig271end:167741-167760 MsG0080048314.01.T01:intron 65.0%
TACGAGGGGAAGGGAGGGGA+GGG - contig271end:163190-163209 MsG0080048314.01.T01:intron 65.0%
TTACGAGGGGAAGGGAGGGG+AGG - contig271end:163189-163208 MsG0080048314.01.T01:intron 65.0%
AGCCGGTTGCACCTGCGTCG+GGG + contig271end:169058-169077 None:intergenic 70.0%
CAGCCGGTTGCACCTGCGTC+GGG + contig271end:169059-169078 None:intergenic 70.0%
GCAGCCGGTTGCACCTGCGT+CGG + contig271end:169060-169079 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
contig271end gene 160532 169404 160532 ID=MsG0080048314.01;Name=MsG0080048314.01
contig271end mRNA 160532 169404 160532 ID=MsG0080048314.01.T01;Parent=MsG0080048314.01;Name=MsG0080048314.01.T01;_AED=0.46;_eAED=0.49;_QI=0|0|0|0.55|0.75|0.77|9|0|676
contig271end exon 169027 169404 169027 ID=MsG0080048314.01.T01:exon:2822;Parent=MsG0080048314.01.T01
contig271end exon 168689 168839 168689 ID=MsG0080048314.01.T01:exon:2823;Parent=MsG0080048314.01.T01
contig271end exon 168451 168581 168451 ID=MsG0080048314.01.T01:exon:2824;Parent=MsG0080048314.01.T01
contig271end exon 167122 167217 167122 ID=MsG0080048314.01.T01:exon:2825;Parent=MsG0080048314.01.T01
contig271end exon 165146 165967 165146 ID=MsG0080048314.01.T01:exon:2826;Parent=MsG0080048314.01.T01
contig271end exon 163479 163565 163479 ID=MsG0080048314.01.T01:exon:2827;Parent=MsG0080048314.01.T01
contig271end exon 163230 163386 163230 ID=MsG0080048314.01.T01:exon:2828;Parent=MsG0080048314.01.T01
contig271end exon 162412 162487 162412 ID=MsG0080048314.01.T01:exon:2829;Parent=MsG0080048314.01.T01
contig271end exon 160532 160664 160532 ID=MsG0080048314.01.T01:exon:2830;Parent=MsG0080048314.01.T01
contig271end CDS 169027 169404 169027 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 168689 168839 168689 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 168451 168581 168451 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 167122 167217 167122 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 165146 165967 165146 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 163479 163565 163479 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 163230 163386 163230 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 162412 162487 162412 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
contig271end CDS 160532 160664 160532 ID=MsG0080048314.01.T01:cds;Parent=MsG0080048314.01.T01
Gene Sequence

>MsG0080048314.01.T01

ATGTTGGGTAGTGAGCAAACTTTAGATTTGTATAAGCTGTTCATGGTGGTGAAGGACAAAGGTGGTTATGATGTTGTTTGTAAGAATGAGTTGTGGGATTTGGTTGGGGAAGAATATGGGTTGGGTGTGAAAGTGGGTTCTTCGGTTAAACTTGTTTATAGTAAGTATCTGAGTGGTCTAGAGACGCCTTTGAAGAATGTCGTTGATGGTGAGTTCCCGAAGCGTGATTTAGTGGGCGATAGAGTTAAGTTTGGGGAGCGTTTAACGGAGTTGCAGGCGGAGTTGGTGTTGGATGATTATGGTGAGGGAGATGTCGGGGATGAAGTCAAGAGTGTATACGGATGTAGGAAGAAGTTGTGTGATACTAATAGAGTGAAGAAAGTTGGTAACCAAAATGCTGCAATGGAGATAATGGATGATGTATCCGATGTAGCAAACAGCATGCCTGGATTGTCAGATGGAAGCAAGAGTTGTGCTAATGATGACGCCAATGAAAGTGGCGATGATGTCTTGATGTTGGACCCATCTAGTTCAATGCCTGAAAAGTCAAAATGGAAGTCTTACGGTAATCACGAGATCTGGAAGAAGGTTTTGTTGTTTCGAGAAGCTGCCTTTCTGAAAAAAGATTTTGGATCAGACTGTGAAAAACTCAGCTGGCTGAACATTGGTGCCGTCTATGGGAATCAAGGTTCCATGCCACGTTTGATGGCTGACAGACCCTTAATCCCTTTGCCTCGATTGAGGGCTATTGTTTCGGCTCAGAGGATGCATCCTTCCATGTATGATGATAACCTTGGGACAAATTACAATCTTAGACAACGGATCAAACGTGACAATGGGGTTTTAGTTGGAAATCTGCATCTATCTTGCAAAGAACACCTGATTCCGAAGCTAAGGAAAAGTTACTCGACTCCTGTGTTCCAGAATCAATTCTTGATGCACCTCACAGTGAATATCCCTCTCGGGCCAAACCATCAAGCTGAAGTGCCCGAATGGACTGGCACAACTCACAAGAGTGATTCTAAGTGGCTGGGAACTCAAATATGGCCACTGCAAATCGTAAAATCCGAACTTTTGGAAGGGGAACCTGTCGGAAAGGGAAGACAAGATTCATGCCGTTGCCAGGTACAGGGTTCTGTCGAGTGTGTTCGATTTCACATTGCTGAGAAAAGCGCTAGACTCAAGCTGGAATATAGTGTGGCCTTTTACCAGTGGAATTTAGACAAAGCAGGGGAAGAAGTGAGGCGATGCTGGACAGCTCAAGAAGAGAAAAAGTTCAAAGATGTAGTGAAATCGAACCCTGCTTCGCTTGATAGATGTTTCTGGGACGATATTTTCACAACATTTCCTAAGAAGAGCAGGGAAAGTTTAGTCAGCTACTACTTCAATGTCTTTCTTTTGCAGCGCAGAGGATACCAGAACAGGCATACTCCTGATAACATTGACAGTGATGATGAAGAATCGGAATTTACACCATTGAAGGGTGCTTTTGGACATCAAACTGATAAATCAAACAGCATCACCTTATTATCCCCTAAGAAGCCACAGCCAACGCCACATACAAAAGGAAGACAGCTAGAAGCCAAGGAGAGATGTGAAGGACGGTATATTGATGTAAACCCTTCAAACACTAAATGTGTGAAAGCACTTCAAGAGATCAATGAGTTGCTGACTGATAGAATGTTGCAAATGTTCTGGATCCCAATTGTGCAAGACTATCACCAAAACCAAATGATACACAATCTAGAAGAGTTCTCAAAGGAAAAGAAACTAATTTCCATTGCAGTTCCAAAAGCAACACCATCAGAAATGGCGGTGCAAGAAACATGGATAGGTACTCTTCATCTGACCGTCGAAGATCCATGGCGTCCTTGGTTTGTTGATGGTCAAGTTGCAGGATGGCCGCCATCTCTAATCAACAAGCCGACGAAGCTTGTCGCTGAGATCTTCAAGGAGATTGATCTGGTGGATTCAGATCTGGCAATTCAAGTTAATTCACATACTGTTTCCATCATTTCCATTACAGCATGA
Protein sequence

>MsG0080048314.01.T01

MLGSEQTLDLYKLFMVVKDKGGYDVVCKNELWDLVGEEYGLGVKVGSSVKLVYSKYLSGLETPLKNVVDGEFPKRDLVGDRVKFGERLTELQAELVLDDYGEGDVGDEVKSVYGCRKKLCDTNRVKKVGNQNAAMEIMDDVSDVANSMPGLSDGSKSCANDDANESGDDVLMLDPSSSMPEKSKWKSYGNHEIWKKVLLFREAAFLKKDFGSDCEKLSWLNIGAVYGNQGSMPRLMADRPLIPLPRLRAIVSAQRMHPSMYDDNLGTNYNLRQRIKRDNGVLVGNLHLSCKEHLIPKLRKSYSTPVFQNQFLMHLTVNIPLGPNHQAEVPEWTGTTHKSDSKWLGTQIWPLQIVKSELLEGEPVGKGRQDSCRCQVQGSVECVRFHIAEKSARLKLEYSVAFYQWNLDKAGEEVRRCWTAQEEKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPDNIDSDDEESEFTPLKGAFGHQTDKSNSITLLSPKKPQPTPHTKGRQLEAKERCEGRYIDVNPSNTKCVKALQEINELLTDRMLQMFWIPIVQDYHQNQMIHNLEEFSKEKKLISIAVPKATPSEMAVQETWIGTLHLTVEDPWRPWFVDGQVAGWPPSLINKPTKLVAEIFKEIDLVDSDLAIQVNSHTVSIISITA*