AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020916.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020916.01.T01 MTR_4g063150 95.484 465 8 1 54 518 2 453 0.0 922
MsG0480020916.01.T01 MTR_1g067750 39.700 534 239 13 54 510 2 529 3.63e-109 335
MsG0480020916.01.T01 MTR_7g023750 38.278 546 243 14 54 515 2 537 2.76e-105 325
MsG0480020916.01.T01 MTR_7g023750 38.122 543 242 14 57 515 2 534 7.05e-104 322
MsG0480020916.01.T01 MTR_1g067750 38.402 513 233 13 62 497 1 507 7.99e-97 303
MsG0480020916.01.T01 MTR_7g023750 37.525 501 219 14 99 515 1 491 5.88e-87 276
MsG0480020916.01.T01 MTR_1g067750 33.042 457 223 13 53 432 1 451 5.19e-58 199
MsG0480020916.01.T01 MTR_7g023750 32.045 440 206 13 53 409 1 430 1.76e-48 174
MsG0480020916.01.T01 MTR_1g067750 31.640 433 214 12 53 409 1 427 4.54e-47 169
MsG0480020916.01.T01 MTR_7g023750 32.648 438 200 15 56 409 1 427 5.98e-47 170
MsG0480020916.01.T01 MTR_1g068930 46.377 138 73 1 371 507 242 379 2.12e-37 147
MsG0480020916.01.T01 MTR_1g068930 46.377 138 73 1 371 507 242 379 2.23e-37 147
MsG0480020916.01.T01 MTR_7g023750 31.633 392 173 15 102 409 4 384 5.77e-31 125
MsG0480020916.01.T01 MTR_7g102610 33.835 133 85 2 364 493 228 360 4.07e-16 82.0
MsG0480020916.01.T01 MTR_1g062330 32.624 141 89 2 370 504 82 222 5.00e-14 75.5
MsG0480020916.01.T01 MTR_1g062330 32.624 141 89 2 370 504 82 222 5.11e-14 75.5
MsG0480020916.01.T01 MTR_2g084410 32.110 109 68 1 383 485 23 131 1.20e-13 71.6
MsG0480020916.01.T01 MTR_2g084375 31.193 109 69 1 383 485 9 117 1.32e-13 71.6
MsG0480020916.01.T01 MTR_2g084425 28.662 157 94 3 346 496 200 344 2.05e-13 73.6
MsG0480020916.01.T01 MTR_2g084425 28.662 157 94 3 346 496 200 344 2.19e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020916.01.T01 AT5G59830 43.923 469 214 11 54 518 2 425 3.41e-119 357
MsG0480020916.01.T01 AT5G59830 43.923 469 214 11 54 518 2 425 3.41e-119 357
MsG0480020916.01.T01 AT5G59830 43.923 469 214 11 54 518 2 425 3.41e-119 357
MsG0480020916.01.T01 AT5G13660 46.429 224 116 2 297 518 314 535 5.17e-58 201
MsG0480020916.01.T01 AT5G13660 46.637 223 116 2 297 518 314 534 7.43e-58 201
MsG0480020916.01.T01 AT3G53680 41.808 177 94 4 333 501 126 301 1.79e-36 144
MsG0480020916.01.T01 AT3G53680 41.808 177 94 4 333 501 126 301 1.85e-36 144
MsG0480020916.01.T01 AT2G37520 46.565 131 69 1 382 511 171 301 1.20e-34 139
MsG0480020916.01.T01 AT5G13660 36.496 137 83 2 297 431 314 448 5.04e-17 84.0
MsG0480020916.01.T01 AT5G13660 36.765 136 83 2 297 431 314 447 6.75e-17 83.6
MsG0480020916.01.T01 AT5G13660 36.765 136 83 2 297 431 314 447 6.75e-17 83.6
MsG0480020916.01.T01 AT2G36720 37.000 100 60 1 384 480 261 360 1.53e-13 73.9
MsG0480020916.01.T01 AT2G36720 37.000 100 60 1 384 480 261 360 1.53e-13 73.9

Find 141 sgRNAs with CRISPR-Local

Find 516 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTAATTGATCGATTATT+TGG 0.067636 4:+50529442 MsG0480020916.01.T01:CDS
TCTGAACCATGTATGAATTT+TGG 0.091302 4:+50529607 MsG0480020916.01.T01:CDS
ATCGATCAATTAATTGATTT+TGG 0.128367 4:-50529435 None:intergenic
CGTGAGCTTCAACGGATTTA+TGG 0.136181 4:+50530846 MsG0480020916.01.T01:CDS
CGAAATGCTTTCTGATTTAT+TGG 0.172704 4:-50530659 None:intergenic
TTTGATATCTTGTTTATTCT+TGG 0.187546 4:-50530118 None:intergenic
GTGTCAAACAATGAACTTTC+AGG 0.198974 4:-50530614 None:intergenic
TTCCTGTACTATTTGATAAA+TGG 0.243583 4:-50530579 None:intergenic
TATGGAGATGGTGCATCTTT+TGG 0.252084 4:+50529556 MsG0480020916.01.T01:CDS
GAGCAAGACTTGTTAATTTC+GGG 0.270886 4:+50531144 MsG0480020916.01.T01:three_prime_UTR
CTTTACAAAACAAGGGATTC+TGG 0.272026 4:+50529182 MsG0480020916.01.T01:CDS
GGAGCAAGACTTGTTAATTT+CGG 0.278962 4:+50531143 MsG0480020916.01.T01:three_prime_UTR
ATCAGAAAGCATTTCGCATT+TGG 0.289716 4:+50530666 MsG0480020916.01.T01:CDS
AGACCGTTTGGCACCCCTTA+TGG 0.301042 4:+50529841 MsG0480020916.01.T01:CDS
TCTATTGCTTGCTTCTTGTT+TGG 0.301219 4:-50529322 None:intergenic
TTGTTTAGCTCTGTGACTTT+TGG 0.301431 4:+50530980 MsG0480020916.01.T01:three_prime_UTR
TCAAAATAAATGTGATTGTT+TGG 0.311141 4:-50530545 None:intergenic
GAACTTCGTGGAATTATAAA+AGG 0.315503 4:+50530325 MsG0480020916.01.T01:CDS
TCATGTTCGTGGGTGATTAA+AGG 0.319909 4:+50531122 MsG0480020916.01.T01:three_prime_UTR
AACCATTGATGAGGTCGTTT+TGG 0.320545 4:-50529271 None:intergenic
AAGGGATTCTGGATGGTAAA+AGG 0.325602 4:+50529193 MsG0480020916.01.T01:CDS
TGGCCTTCACGACGGCTTCC+AGG 0.330850 4:+50524912 MsG0480020916.01.T01:CDS
GAGATAGCACCCTGTTCATC+TGG 0.331410 4:-50529943 None:intergenic
GAGACAAATATAATTTCTTT+TGG 0.334047 4:+50529913 MsG0480020916.01.T01:CDS
AAGATGATCGCAAATCATTA+TGG 0.336592 4:+50529538 MsG0480020916.01.T01:CDS
AGCACCTAATCCCAATGATT+TGG 0.339666 4:-50531061 None:intergenic
TGGTGGGTTCCCAGATGAAC+AGG 0.346993 4:+50529933 MsG0480020916.01.T01:CDS
TGTTATCTACTTTGCCATAA+GGG 0.349075 4:-50529855 None:intergenic
ATGTCCAAATCATTGGGATT+AGG 0.354920 4:+50531057 MsG0480020916.01.T01:three_prime_UTR
GTAACTTATGTCCAAATCAT+TGG 0.363263 4:+50531050 MsG0480020916.01.T01:three_prime_UTR
TTATTCTTGGACATAGATTC+AGG 0.367033 4:-50530105 None:intergenic
TGGTGCATTGTGTAACTTGT+TGG 0.377027 4:+50531000 MsG0480020916.01.T01:three_prime_UTR
TTCTGGATGGTAAAAGGATC+TGG 0.378698 4:+50529199 MsG0480020916.01.T01:CDS
GTTGGTTTCACTCAAAAGAT+TGG 0.382596 4:+50531018 MsG0480020916.01.T01:three_prime_UTR
GAGACGAGATCTGGATCAAC+AGG 0.382783 4:+50529748 MsG0480020916.01.T01:CDS
GGGCCTTCACGGCGGCGTCC+TGG 0.383336 4:+50524837 MsG0480020916.01.T01:CDS
ATCAAGCTCCTGACATTAGT+AGG 0.391092 4:-50530171 None:intergenic
AGTTGTTCCTCATGGGTTGA+TGG 0.392819 4:+50531247 MsG0480020916.01.T01:three_prime_UTR
CAAGAAAGTCAAAGTAAATC+AGG 0.395208 4:+50529636 MsG0480020916.01.T01:CDS
AATTAATTGATCGATTATTT+GGG 0.397385 4:+50529443 MsG0480020916.01.T01:CDS
GTGTTATCTACTTTGCCATA+AGG 0.399952 4:-50529856 None:intergenic
ACATTAGTAGGGAAGGTGTT+TGG 0.404286 4:-50530159 None:intergenic
CAAAGATGGTGGGGACTTAG+AGG 0.407569 4:-50530884 None:intergenic
GCGCAAACTTAACTTAGGTT+AGG 0.418573 4:+50530906 MsG0480020916.01.T01:three_prime_UTR
GGGGAAGTTGAGACGAGATC+TGG 0.422910 4:+50529739 MsG0480020916.01.T01:CDS
ATCAAATAGTACAGGAATTG+AGG 0.425574 4:+50530585 MsG0480020916.01.T01:CDS
AATACCTACGTTTCGGGCGA+TGG 0.429341 4:+50529499 MsG0480020916.01.T01:CDS
GGCGGAGCGATGGGCCTTCA+CGG 0.429904 4:+50524826 None:intergenic
AGGGTGCTATCTCTGTGGGC+AGG 0.434956 4:+50529953 MsG0480020916.01.T01:CDS
TAACTTATGTCCAAATCATT+GGG 0.436654 4:+50531051 MsG0480020916.01.T01:three_prime_UTR
AAAGGAACTACCTATCTTTG+TGG 0.443908 4:+50530343 MsG0480020916.01.T01:CDS
CTTGCAGTCTTTACAAAACA+AGG 0.446967 4:+50529174 MsG0480020916.01.T01:CDS
TGACTGACACCCACAAAGAT+AGG 0.451929 4:-50530353 None:intergenic
ATATCTACTGGTATGCTAGA+TGG 0.454824 4:+50530192 MsG0480020916.01.T01:CDS
CTACCTTCTGTCGTGTTACC+AGG 0.455031 4:-50524855 None:intergenic
GATGCCCGTATCAGACCGTT+TGG 0.458600 4:+50529829 MsG0480020916.01.T01:CDS
GCAAATGAAAGATCTAGTTC+AGG 0.460327 4:+50529349 MsG0480020916.01.T01:CDS
TAATTTCGGGGCACTGAACT+CGG 0.466461 4:+50531157 MsG0480020916.01.T01:three_prime_UTR
ATGGGACTTGCCTATGGCAG+TGG 0.470833 4:+50529805 MsG0480020916.01.T01:CDS
TCTTTGCGCAAACTTAACTT+AGG 0.471362 4:+50530901 MsG0480020916.01.T01:three_prime_UTR
GCGAATCACGTCGGAGCGAT+TGG 0.471729 4:+50524892 MsG0480020916.01.T01:CDS
TTCAGTGAAATTGACAGGCC+TGG 0.472169 4:-50529473 None:intergenic
GGGTGCCAAACGGTCTGATA+CGG 0.474649 4:-50529834 None:intergenic
GTCAGGAGCTTGATATCTAC+TGG 0.476574 4:+50530180 MsG0480020916.01.T01:CDS
GATCTACACCATGTCTATCA+TGG 0.482318 4:+50529718 MsG0480020916.01.T01:CDS
TGTCAAACAATGAACTTTCA+GGG 0.482656 4:-50530613 None:intergenic
CTCTAGAAAGCTCATGTTCG+TGG 0.485379 4:+50531111 MsG0480020916.01.T01:three_prime_UTR
TGTAGTTGCAAGTACTCCTT+TGG 0.489839 4:+50530068 MsG0480020916.01.T01:CDS
TTATGGATGCAGGAACTTCG+TGG 0.493198 4:+50530313 MsG0480020916.01.T01:intron
AAGTTAAGTTTGCGCAAAGA+TGG 0.494942 4:-50530898 None:intergenic
GATTATTTGGGTCTGAAACC+AGG 0.501220 4:+50529455 MsG0480020916.01.T01:CDS
ATCTACACCATGTCTATCAT+GGG 0.502576 4:+50529719 MsG0480020916.01.T01:CDS
CTGTCAAAATTATGTTGCTC+TGG 0.503021 4:-50529682 None:intergenic
TTGGAAGGATTATCAAATGC+CGG 0.504114 4:-50529241 None:intergenic
CAGCAACACGTGAGCTTCAA+CGG 0.506790 4:+50530838 MsG0480020916.01.T01:CDS
GGGTGCTATCTCTGTGGGCA+GGG 0.508071 4:+50529954 MsG0480020916.01.T01:CDS
GAAGTATGTCTCGGTGGCGC+GGG 0.512915 4:+50530224 MsG0480020916.01.T01:CDS
ACGGGCATCCCCACTGCCAT+AGG 0.513675 4:-50529815 None:intergenic
TCTGGAGCTTGCACATCACT+AGG 0.513874 4:-50529664 None:intergenic
AAGGAACTACCTATCTTTGT+GGG 0.520214 4:+50530344 MsG0480020916.01.T01:CDS
TATAAGATTCAGCAATGGAT+AGG 0.522976 4:-50529882 None:intergenic
GTTATCTACTTTGCCATAAG+GGG 0.524676 4:-50529854 None:intergenic
GGTTTCACTCAAAAGATTGG+AGG 0.526129 4:+50531021 MsG0480020916.01.T01:three_prime_UTR
GACCATTTATCAAATAGTAC+AGG 0.526696 4:+50530577 MsG0480020916.01.T01:CDS
TGAAGTATGTCTCGGTGGCG+CGG 0.530846 4:+50530223 MsG0480020916.01.T01:CDS
AACCAAAACGACCTCATCAA+TGG 0.536411 4:+50529269 MsG0480020916.01.T01:CDS
GACATTGCCATCCTTGTCAA+AGG 0.543189 4:-50529776 None:intergenic
TTGCCATAAGGGGTGCCAAA+CGG 0.546220 4:-50529844 None:intergenic
TAAGTTTGCGCAAAGATGGT+GGG 0.548142 4:-50530894 None:intergenic
TGGGACTTGCCTATGGCAGT+GGG 0.549439 4:+50529806 MsG0480020916.01.T01:CDS
GGTGCCAAACGGTCTGATAC+GGG 0.551701 4:-50529833 None:intergenic
AAAGCATTTCGCATTTGGAA+AGG 0.553389 4:+50530671 MsG0480020916.01.T01:CDS
TGGTTAATTGATGCAACTGA+AGG 0.554560 4:+50529289 MsG0480020916.01.T01:CDS
TTACCAGGACGCCGCCGTGA+AGG 0.554883 4:-50524840 None:intergenic
AACAGCTCATGAGAAAGAGT+TGG 0.557874 4:+50530029 MsG0480020916.01.T01:CDS
ACACCTTCCCTACTAATGTC+AGG 0.559082 4:+50530163 MsG0480020916.01.T01:CDS
TTAAGTTTGCGCAAAGATGG+TGG 0.560921 4:-50530895 None:intergenic
ATCGCAAATCATTATGGAGA+TGG 0.565757 4:+50529544 MsG0480020916.01.T01:CDS
TTCGAGTTTGAAAAGCATGC+TGG 0.566420 4:+50530506 MsG0480020916.01.T01:CDS
GGGCAAGCCTTTGACAAGGA+TGG 0.567272 4:+50529769 MsG0480020916.01.T01:CDS
GGTTAATTGATGCAACTGAA+GGG 0.567822 4:+50529290 MsG0480020916.01.T01:CDS
GCATGTTAGTGACAGAGAGC+CGG 0.576985 4:+50529222 MsG0480020916.01.T01:CDS
GTATGTCTCGGTGGCGCGGG+AGG 0.577134 4:+50530227 MsG0480020916.01.T01:CDS
TCTGGATGGTAAAAGGATCT+GGG 0.577994 4:+50529200 MsG0480020916.01.T01:CDS
ACAAAACAAGGGATTCTGGA+TGG 0.579040 4:+50529186 MsG0480020916.01.T01:CDS
GTTAATTGATGCAACTGAAG+GGG 0.584842 4:+50529291 MsG0480020916.01.T01:CDS
GAACAGGGTGCTATCTCTGT+GGG 0.585928 4:+50529949 MsG0480020916.01.T01:CDS
AGAACCATCGCCCGAAACGT+AGG 0.586722 4:-50529503 None:intergenic
GGTGGGTTCCCAGATGAACA+GGG 0.587135 4:+50529934 MsG0480020916.01.T01:CDS
AAATTGTGATTGTTCTCCCA+CGG 0.592315 4:-50529394 None:intergenic
TCAAGCTCCTGACATTAGTA+GGG 0.592776 4:-50530170 None:intergenic
GCTCCTGACATTAGTAGGGA+AGG 0.594371 4:-50530166 None:intergenic
AGATAGCACCCTGTTCATCT+GGG 0.596294 4:-50529942 None:intergenic
TTCAAATACACAAGAAAACT+CGG 0.599516 4:+50531213 MsG0480020916.01.T01:three_prime_UTR
TTGCAGTCTTTACAAAACAA+GGG 0.608181 4:+50529175 MsG0480020916.01.T01:CDS
TTTATTATAAGATTCAGCAA+TGG 0.610633 4:-50529887 None:intergenic
AGCAAGACTTGTTAATTTCG+GGG 0.610779 4:+50531145 MsG0480020916.01.T01:three_prime_UTR
TCTAGAAAGCTCATGTTCGT+GGG 0.612589 4:+50531112 MsG0480020916.01.T01:three_prime_UTR
GAAGGTAGATAGCGCAGTGG+TGG 0.617469 4:+50524870 MsG0480020916.01.T01:CDS
CAACTTCCCCATGATAGACA+TGG 0.618862 4:-50529726 None:intergenic
CGTCCTGGTAACACGACAGA+AGG 0.618926 4:+50524852 MsG0480020916.01.T01:CDS
GCATCAATTAACCATTGATG+AGG 0.620118 4:-50529280 None:intergenic
TCAGTCATGTAACTATTCCA+AGG 0.620903 4:+50530369 MsG0480020916.01.T01:CDS
ATATGACTGTTCATAGTCTG+TGG 0.620918 4:-50529980 None:intergenic
GCCACCGAGACATACTTCAC+AGG 0.621034 4:-50530219 None:intergenic
GGAGCGATTGGCCTTCACGA+CGG 0.623247 4:+50524904 MsG0480020916.01.T01:CDS
TTACCTGGAAGCCGTCGTGA+AGG 0.627033 4:-50524915 None:intergenic
GTCAAACAATGAACTTTCAG+GGG 0.632047 4:-50530612 None:intergenic
AACAGGGCAAGCCTTTGACA+AGG 0.649294 4:+50529765 MsG0480020916.01.T01:CDS
AAGTTTGCGCAAAGATGGTG+GGG 0.650497 4:-50530893 None:intergenic
TGAACAGGGTGCTATCTCTG+TGG 0.661663 4:+50529948 MsG0480020916.01.T01:CDS
GGGACTTGCCTATGGCAGTG+GGG 0.687403 4:+50529807 MsG0480020916.01.T01:CDS
TGTTCCTGTGAAGTATGTCT+CGG 0.693290 4:+50530215 MsG0480020916.01.T01:CDS
TCCTGTGAAGTATGTCTCGG+TGG 0.694815 4:+50530218 MsG0480020916.01.T01:CDS
CTAGAATCCATCAACCCATG+AGG 0.695569 4:-50531254 None:intergenic
GGAGCGATGGGCCTTCACGG+CGG 0.701517 4:+50524829 None:intergenic
TCTACACCATGTCTATCATG+GGG 0.701654 4:+50529720 MsG0480020916.01.T01:CDS
GCAGTGGTGGCGAATCACGT+CGG 0.708365 4:+50524883 MsG0480020916.01.T01:CDS
AACAAGATATCAAATCAACA+AGG 0.715980 4:+50530127 MsG0480020916.01.T01:CDS
AGACGAGATCTGGATCAACA+GGG 0.736721 4:+50529749 MsG0480020916.01.T01:CDS
ACAGAAGGTAGATAGCGCAG+TGG 0.759320 4:+50524867 MsG0480020916.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAGAATATAACTTATAA+AGG - Chr4:50530297-50530316 None:intergenic 10.0%
!! ATTTAAAAAAAAAAACAACT+TGG - Chr4:50529048-50529067 None:intergenic 10.0%
!! TAAACATTAAATCTAAAAAA+GGG - Chr4:50528356-50528375 None:intergenic 10.0%
!! TTTATAAGTTATATTCTTTA+TGG + Chr4:50530296-50530315 MsG0480020916.01.T01:intron 10.0%
!! AATTAATTAATTAAGAAGAG+TGG - Chr4:50527213-50527232 None:intergenic 15.0%
!! AATTAATTGATCGATTATTT+GGG + Chr4:50529443-50529462 MsG0480020916.01.T01:CDS 15.0%
!! CTAAACATTAAATCTAAAAA+AGG - Chr4:50528357-50528376 None:intergenic 15.0%
!! GATATTTATTCAAATTACAT+TGG - Chr4:50526271-50526290 None:intergenic 15.0%
!! TAATATAAAACATCAATCAA+AGG - Chr4:50530470-50530489 None:intergenic 15.0%
!!! AAATGTTGAATTTTATTGTT+TGG + Chr4:50530745-50530764 MsG0480020916.01.T01:intron 15.0%
!!! AATGTTGAATTTTATTGTTT+GGG + Chr4:50530746-50530765 MsG0480020916.01.T01:intron 15.0%
!!! ATTGATGTTTTATATTATCA+GGG + Chr4:50530473-50530492 MsG0480020916.01.T01:intron 15.0%
!!! ATTTTATACAATGCAATAAT+AGG + Chr4:50528977-50528996 MsG0480020916.01.T01:intron 15.0%
!!! ATTTTTTAGAGTAAAATTTG+AGG + Chr4:50527903-50527922 MsG0480020916.01.T01:intron 15.0%
!!! TCTTTTTTTTAAATGTTCTT+GGG - Chr4:50528901-50528920 None:intergenic 15.0%
!!! TTCTTTTTTTTAAATGTTCT+TGG - Chr4:50528902-50528921 None:intergenic 15.0%
!!! TTTATTTTTTGTCATTGAAT+TGG + Chr4:50527654-50527673 MsG0480020916.01.T01:intron 15.0%
!!! TTTTTTAGAGTAAAATTTGA+GGG + Chr4:50527904-50527923 MsG0480020916.01.T01:intron 15.0%
!! AAAACCATTATTAAGATGTT+TGG - Chr4:50530422-50530441 None:intergenic 20.0%
!! AAGACAAATAAAAATGTTAC+AGG - Chr4:50531195-50531214 None:intergenic 20.0%
!! ATATTGTTAGTTATGTTAAG+AGG + Chr4:50527500-50527519 MsG0480020916.01.T01:intron 20.0%
!! ATGAAATTTAATGAATTACG+TGG - Chr4:50526480-50526499 None:intergenic 20.0%
!! ATTGCATTGTATAAAATACA+AGG - Chr4:50528974-50528993 None:intergenic 20.0%
!! ATTTATTCAAATTACATTGG+TGG - Chr4:50526268-50526287 None:intergenic 20.0%
!! CAATTAATTGATCGATTATT+TGG + Chr4:50529442-50529461 MsG0480020916.01.T01:CDS 20.0%
!! CCTTAGAAAAATACTTAATA+GGG + Chr4:50525922-50525941 MsG0480020916.01.T01:intron 20.0%
!! GATAAAAAAATTTGATGAGT+TGG - Chr4:50526638-50526657 None:intergenic 20.0%
!! TAAAAAAAAAAACAACTTGG+TGG - Chr4:50529045-50529064 None:intergenic 20.0%
!! TAAATTTATTGTTAGGTGTT+AGG - Chr4:50525986-50526005 None:intergenic 20.0%
!! TAAGATATTATGCTTCTATT+TGG + Chr4:50528160-50528179 MsG0480020916.01.T01:intron 20.0%
!! TATTGTTAGTTATGTTAAGA+GGG + Chr4:50527501-50527520 MsG0480020916.01.T01:intron 20.0%
!! TCAAAATAAATGTGATTGTT+TGG - Chr4:50530548-50530567 None:intergenic 20.0%
!! TCCTTAGAAAAATACTTAAT+AGG + Chr4:50525921-50525940 MsG0480020916.01.T01:intron 20.0%
!! TGGATAAACAATTTAAATGA+GGG + Chr4:50528180-50528199 MsG0480020916.01.T01:intron 20.0%
!! TGTGTTAATGTTAATATGAT+GGG + Chr4:50527720-50527739 MsG0480020916.01.T01:intron 20.0%
!! TTGCATTGTATAAAATACAA+GGG - Chr4:50528973-50528992 None:intergenic 20.0%
!! TTGGATAAACAATTTAAATG+AGG + Chr4:50528179-50528198 MsG0480020916.01.T01:intron 20.0%
!! TTGTGTTAATGTTAATATGA+TGG + Chr4:50527719-50527738 MsG0480020916.01.T01:intron 20.0%
!! TTTATTATAAGATTCAGCAA+TGG - Chr4:50529890-50529909 None:intergenic 20.0%
!!! AATCACATTTATTTTGAGAA+TGG + Chr4:50530551-50530570 MsG0480020916.01.T01:CDS 20.0%
!!! AATTTTTTCACCATTTTCTA+AGG + Chr4:50527008-50527027 MsG0480020916.01.T01:intron 20.0%
!!! ACAAATATAATTTCTTTTGG+TGG + Chr4:50529916-50529935 MsG0480020916.01.T01:CDS 20.0%
!!! ACGTCAATAATTTATGATTT+TGG - Chr4:50525902-50525921 None:intergenic 20.0%
!!! AGTCTATGACATTTTAATAA+TGG + Chr4:50527595-50527614 MsG0480020916.01.T01:intron 20.0%
!!! ATCACATTTATTTTGAGAAT+GGG + Chr4:50530552-50530571 MsG0480020916.01.T01:CDS 20.0%
!!! ATCGATCAATTAATTGATTT+TGG - Chr4:50529438-50529457 None:intergenic 20.0%
!!! CAAATATAATTTCTTTTGGT+GGG + Chr4:50529917-50529936 MsG0480020916.01.T01:CDS 20.0%
!!! GAAAACAATTTTATGCTAAT+TGG + Chr4:50526161-50526180 MsG0480020916.01.T01:intron 20.0%
!!! GAGACAAATATAATTTCTTT+TGG + Chr4:50529913-50529932 MsG0480020916.01.T01:CDS 20.0%
!!! GATTGATGTTTTATATTATC+AGG + Chr4:50530472-50530491 MsG0480020916.01.T01:intron 20.0%
!!! GTTTTCAATTAATATGTGTA+GGG - Chr4:50526147-50526166 None:intergenic 20.0%
!!! TAAATCATGGATTTAAAGTT+TGG + Chr4:50525773-50525792 MsG0480020916.01.T01:intron 20.0%
!!! TGAATTCTATGAATTTTGTT+TGG + Chr4:50527099-50527118 MsG0480020916.01.T01:intron 20.0%
!!! TGTTTTCAATTAATATGTGT+AGG - Chr4:50526148-50526167 None:intergenic 20.0%
!!! TTCAAGTTATAAACTTTCTA+AGG - Chr4:50527289-50527308 None:intergenic 20.0%
!!! TTCATTTTTGTATCCAATAT+AGG + Chr4:50526495-50526514 MsG0480020916.01.T01:intron 20.0%
!!! TTTGATATCTTGTTTATTCT+TGG - Chr4:50530121-50530140 None:intergenic 20.0%
! AAAATGTCATAGACTAATCT+GGG - Chr4:50527590-50527609 None:intergenic 25.0%
! AAATTTGAGGGATAAATCAT+AGG + Chr4:50528307-50528326 MsG0480020916.01.T01:intron 25.0%
! AACAAGATATCAAATCAACA+AGG + Chr4:50530127-50530146 MsG0480020916.01.T01:CDS 25.0%
! AACTATCAATCAGAAATCAA+GGG - Chr4:50528015-50528034 None:intergenic 25.0%
! ACTAAAGGTGGAATATATAA+TGG - Chr4:50526111-50526130 None:intergenic 25.0%
! AGACAGTGATAAGTTAATAA+TGG - Chr4:50528871-50528890 None:intergenic 25.0%
! AGTCAAATGCATATCATTAA+GGG + Chr4:50528084-50528103 MsG0480020916.01.T01:intron 25.0%
! CTAATTTAAATGAGCTAGTT+AGG + Chr4:50528250-50528269 MsG0480020916.01.T01:intron 25.0%
! GATCTTTGTAGAAGTTAATT+TGG - Chr4:50526540-50526559 None:intergenic 25.0%
! GCAAGAGTTACAAAAAAAAT+GGG - Chr4:50530793-50530812 None:intergenic 25.0%
! TAAAATGTCATAGACTAATC+TGG - Chr4:50527591-50527610 None:intergenic 25.0%
! TAACTATCAATCAGAAATCA+AGG - Chr4:50528016-50528035 None:intergenic 25.0%
! TAACTTATGTCCAAATCATT+GGG + Chr4:50531051-50531070 MsG0480020916.01.T01:three_prime_UTR 25.0%
! TATATATTCCACCTTTAGTA+GGG + Chr4:50526112-50526131 MsG0480020916.01.T01:intron 25.0%
! TATGAATTTCGTAATTGATG+AGG + Chr4:50528278-50528297 MsG0480020916.01.T01:intron 25.0%
! TATTAACTTATCACTGTCTA+AGG + Chr4:50528872-50528891 MsG0480020916.01.T01:intron 25.0%
! TGAAAAAAATACCTACGTTT+CGG + Chr4:50529492-50529511 MsG0480020916.01.T01:CDS 25.0%
! TGCATTGTATAAAATACAAG+GGG - Chr4:50528972-50528991 None:intergenic 25.0%
! TTATATATTCCACCTTTAGT+AGG + Chr4:50526111-50526130 MsG0480020916.01.T01:intron 25.0%
! TTCAAATACACAAGAAAACT+CGG + Chr4:50531213-50531232 MsG0480020916.01.T01:three_prime_UTR 25.0%
! TTCCTGTACTATTTGATAAA+TGG - Chr4:50530582-50530601 None:intergenic 25.0%
! TTTGATTATATCACACAACT+AGG - Chr4:50528409-50528428 None:intergenic 25.0%
!! AAATGTAAATTTTACTCCGT+GGG + Chr4:50529378-50529397 MsG0480020916.01.T01:CDS 25.0%
!! AATTGATAGCATTATAGAAG+CGG - Chr4:50526992-50527011 None:intergenic 25.0%
!! ATTTAAAGTTTGGATTGGAA+AGG + Chr4:50525783-50525802 MsG0480020916.01.T01:intron 25.0%
!! CCCTATTAAGTATTTTTCTA+AGG - Chr4:50525925-50525944 None:intergenic 25.0%
!!! AAATCTATAGTGGATTTTTC+AGG + Chr4:50527318-50527337 MsG0480020916.01.T01:intron 25.0%
!!! AATATTTTAGTTGTTCCTCA+TGG + Chr4:50531239-50531258 MsG0480020916.01.T01:three_prime_UTR 25.0%
!!! AATGGATTGTGATAAAAGAA+AGG + Chr4:50528213-50528232 MsG0480020916.01.T01:intron 25.0%
!!! ATATTTTAGTTGTTCCTCAT+GGG + Chr4:50531240-50531259 MsG0480020916.01.T01:three_prime_UTR 25.0%
!!! CACTTTTTCTTCTTCTAAAT+TGG + Chr4:50528044-50528063 MsG0480020916.01.T01:intron 25.0%
!!! CTATGTTTGTTATCTGAAAT+TGG + Chr4:50527743-50527762 MsG0480020916.01.T01:intron 25.0%
!!! GATCAATTAATTGATTTTGG+TGG - Chr4:50529435-50529454 None:intergenic 25.0%
!!! GTTAATTCAACACTTTTTCA+GGG + Chr4:50526076-50526095 MsG0480020916.01.T01:intron 25.0%
!!! TTTTTTTCAGTGAAATTGAC+AGG - Chr4:50529481-50529500 None:intergenic 25.0%
AAACCGAACAAGAACAAATA+CGG + Chr4:50525457-50525476 MsG0480020916.01.T01:intron 30.0%
AAGATGATCGCAAATCATTA+TGG + Chr4:50529538-50529557 MsG0480020916.01.T01:CDS 30.0%
AATCTGGATCAAAATTGAGA+AGG + Chr4:50525409-50525428 MsG0480020916.01.T01:intron 30.0%
ACCTACATGGAGATTTATTT+AGG - Chr4:50526700-50526719 None:intergenic 30.0%
ACTGTAAAACATGCATGTTT+GGG - Chr4:50525587-50525606 None:intergenic 30.0%
AGTGAAGAACAAATCTATAG+TGG + Chr4:50527308-50527327 MsG0480020916.01.T01:intron 30.0%
ATCAAATAGTACAGGAATTG+AGG + Chr4:50530585-50530604 MsG0480020916.01.T01:CDS 30.0%
ATCAATCAAAGGTAATCTAC+AGG - Chr4:50530459-50530478 None:intergenic 30.0%
CAAGAAAGTCAAAGTAAATC+AGG + Chr4:50529636-50529655 MsG0480020916.01.T01:CDS 30.0%
CAATTTAAATGAGGGCTTAA+AGG + Chr4:50528188-50528207 MsG0480020916.01.T01:intron 30.0%
CAGAAAAGAAGATAAACTGA+AGG - Chr4:50528432-50528451 None:intergenic 30.0%
CGAAATGCTTTCTGATTTAT+TGG - Chr4:50530662-50530681 None:intergenic 30.0%
CTGACCAAACATCTTAATAA+TGG + Chr4:50530415-50530434 MsG0480020916.01.T01:intron 30.0%
GAAAAAAATACCTACGTTTC+GGG + Chr4:50529493-50529512 MsG0480020916.01.T01:CDS 30.0%
GAAAAATTCGGTTTCAATCT+GGG - Chr4:50525435-50525454 None:intergenic 30.0%
GAACTTCGTGGAATTATAAA+AGG + Chr4:50530325-50530344 MsG0480020916.01.T01:CDS 30.0%
GACCATTTATCAAATAGTAC+AGG + Chr4:50530577-50530596 MsG0480020916.01.T01:CDS 30.0%
GAGTCAAATGCATATCATTA+AGG + Chr4:50528083-50528102 MsG0480020916.01.T01:intron 30.0%
GGCAAGAGTTACAAAAAAAA+TGG - Chr4:50530794-50530813 None:intergenic 30.0%
GTAACTTATGTCCAAATCAT+TGG + Chr4:50531050-50531069 MsG0480020916.01.T01:three_prime_UTR 30.0%
GTTATATTCTTTATGGATGC+AGG + Chr4:50530303-50530322 MsG0480020916.01.T01:intron 30.0%
GTTCTTAATGAGTTTCACTA+AGG - Chr4:50526455-50526474 None:intergenic 30.0%
GTTGAAATGTAATAGAAGCA+TGG + Chr4:50528598-50528617 MsG0480020916.01.T01:intron 30.0%
TAGTCTGTTTGTGCTTAAAA+AGG - Chr4:50530712-50530731 None:intergenic 30.0%
TATAAAATACAAGGGGAAGA+GGG - Chr4:50528965-50528984 None:intergenic 30.0%
TATAAGATTCAGCAATGGAT+AGG - Chr4:50529885-50529904 None:intergenic 30.0%
TCCTAAATAAATCTCCATGT+AGG + Chr4:50526696-50526715 MsG0480020916.01.T01:intron 30.0%
TGAAAAATTCGGTTTCAATC+TGG - Chr4:50525436-50525455 None:intergenic 30.0%
TGAGTTAGACAAACCTATAT+TGG - Chr4:50526511-50526530 None:intergenic 30.0%
TGTCAAACAATGAACTTTCA+GGG - Chr4:50530616-50530635 None:intergenic 30.0%
TGTTATCTACTTTGCCATAA+GGG - Chr4:50529858-50529877 None:intergenic 30.0%
TGTTGCTATCTTATAAATGC+AGG - Chr4:50526319-50526338 None:intergenic 30.0%
TTAATCAATCCAACTGACAT+AGG - Chr4:50529084-50529103 None:intergenic 30.0%
TTATTCTTGGACATAGATTC+AGG - Chr4:50530108-50530127 None:intergenic 30.0%
TTGCAGTCTTTACAAAACAA+GGG + Chr4:50529175-50529194 MsG0480020916.01.T01:CDS 30.0%
TTTAAGCACAAACAGACTAA+CGG + Chr4:50530713-50530732 MsG0480020916.01.T01:intron 30.0%
! AAAATCTTGTCTGAAGTTGA+AGG + Chr4:50525239-50525258 MsG0480020916.01.T01:intron 30.0%
! AAATTTGATGAGTTGGATGA+TGG - Chr4:50526631-50526650 None:intergenic 30.0%
! ATGATTTTCCACATTTCCTT+TGG - Chr4:50528708-50528727 None:intergenic 30.0%
! ATGCTTCATGTTTTCCTTTT+GGG + Chr4:50527788-50527807 MsG0480020916.01.T01:intron 30.0%
! CAAATGTAAATTTTACTCCG+TGG + Chr4:50529377-50529396 MsG0480020916.01.T01:CDS 30.0%
! CATGGATTTAAAGTTTGGAT+TGG + Chr4:50525778-50525797 MsG0480020916.01.T01:intron 30.0%
! CTGAACCATGTATGAATTTT+GGG + Chr4:50529608-50529627 MsG0480020916.01.T01:CDS 30.0%
! GACACAATCCAAACAATTTT+TGG + Chr4:50530632-50530651 MsG0480020916.01.T01:CDS 30.0%
! GGAATATATAATGGAAGCTA+AGG - Chr4:50526102-50526121 None:intergenic 30.0%
! GGGATAAAACTCATTCTTTT+TGG - Chr4:50528735-50528754 None:intergenic 30.0%
! GTTATCTGAAATTGGAATTG+AGG + Chr4:50527751-50527770 MsG0480020916.01.T01:intron 30.0%
! TAGTGTCGTTATCATATATG+AGG - Chr4:50526593-50526612 None:intergenic 30.0%
! TCAGACAAGATTTTGAACTA+TGG - Chr4:50525233-50525252 None:intergenic 30.0%
! TCTGAACCATGTATGAATTT+TGG + Chr4:50529607-50529626 MsG0480020916.01.T01:CDS 30.0%
! TGAACCATGTATGAATTTTG+GGG + Chr4:50529609-50529628 MsG0480020916.01.T01:CDS 30.0%
! TGTTCGGTTTCTGAAAAATT+CGG - Chr4:50525447-50525466 None:intergenic 30.0%
! TTCAAATTACATTGGTGGTA+CGG - Chr4:50526263-50526282 None:intergenic 30.0%
!! AATTAAGAAGAGTGGATTAG+TGG - Chr4:50527205-50527224 None:intergenic 30.0%
!! ATTAATTGATTTTGGTGGCT+TGG - Chr4:50529430-50529449 None:intergenic 30.0%
!! ATTTGACTCCTCTAAAGTAA+AGG - Chr4:50528072-50528091 None:intergenic 30.0%
!! TCTCAATTTTGATCCAGATT+TGG - Chr4:50525409-50525428 None:intergenic 30.0%
!! TGATAACGACACTAAGATTT+TGG + Chr4:50526599-50526618 MsG0480020916.01.T01:intron 30.0%
!! TTAATTGATTTTGGTGGCTT+GGG - Chr4:50529429-50529448 None:intergenic 30.0%
!! TTTGACTCCTCTAAAGTAAA+GGG - Chr4:50528071-50528090 None:intergenic 30.0%
!! TTTTATTGTTTGGGCTTGTT+TGG + Chr4:50530755-50530774 MsG0480020916.01.T01:intron 30.0%
!!! CATTCTACGATCTTATTTTG+AGG + Chr4:50527880-50527899 MsG0480020916.01.T01:intron 30.0%
!!! CGTTAATTCAACACTTTTTC+AGG + Chr4:50526075-50526094 MsG0480020916.01.T01:intron 30.0%
!!! GATGGCAATGTCATTTTAAT+GGG + Chr4:50529787-50529806 MsG0480020916.01.T01:CDS 30.0%
!!! GTTGTTTTAAGAACCAAATC+TGG + Chr4:50525393-50525412 MsG0480020916.01.T01:intron 30.0%
!!! TTTTTTGTAACTCTTGCCAA+TGG + Chr4:50530796-50530815 MsG0480020916.01.T01:intron 30.0%
AAAACCACTATGAAAACCAC+TGG + Chr4:50525678-50525697 MsG0480020916.01.T01:intron 35.0%
AAAATTGTGAAGGGCCAAAT+TGG - Chr4:50527532-50527551 None:intergenic 35.0%
AAAGGAACTACCTATCTTTG+TGG + Chr4:50530343-50530362 MsG0480020916.01.T01:CDS 35.0%
AAATTGTGAAGGGCCAAATT+GGG - Chr4:50527531-50527550 None:intergenic 35.0%
AAATTGTGATTGTTCTCCCA+CGG - Chr4:50529397-50529416 None:intergenic 35.0%
AACAAAGAATTGGAAACTGG+AGG + Chr4:50525049-50525068 MsG0480020916.01.T01:intron 35.0%
AAGATCTGGTGTTTGTTTGA+GGG + Chr4:50525701-50525720 MsG0480020916.01.T01:intron 35.0%
AAGGAACTACCTATCTTTGT+GGG + Chr4:50530344-50530363 MsG0480020916.01.T01:CDS 35.0%
AAGTTAAGTTTGCGCAAAGA+TGG - Chr4:50530901-50530920 None:intergenic 35.0%
AATGAGGGCTTAAAGGAAAA+TGG + Chr4:50528195-50528214 MsG0480020916.01.T01:intron 35.0%
AATTGGACCCTTTACTTTAG+AGG + Chr4:50528061-50528080 MsG0480020916.01.T01:intron 35.0%
ACAAATTAGTCCCTATGTCA+GGG + Chr4:50527620-50527639 MsG0480020916.01.T01:intron 35.0%
AGACGAGACAAAAATGAGAT+GGG + Chr4:50527850-50527869 MsG0480020916.01.T01:intron 35.0%
AGCATGGAAGAGAAAAGAAA+AGG + Chr4:50528614-50528633 MsG0480020916.01.T01:intron 35.0%
AGTGAAGCAAAAAACGTGAA+AGG + Chr4:50524962-50524981 MsG0480020916.01.T01:intron 35.0%
ATAAAATACAAGGGGAAGAG+GGG - Chr4:50528964-50528983 None:intergenic 35.0%
ATAGCATTATAGAAGCGGAA+TGG - Chr4:50526987-50527006 None:intergenic 35.0%
ATATCTACTGGTATGCTAGA+TGG + Chr4:50530192-50530211 MsG0480020916.01.T01:CDS 35.0%
ATATCTGCACTCATCAAAAC+TGG + Chr4:50525089-50525108 MsG0480020916.01.T01:intron 35.0%
ATATGACTGTTCATAGTCTG+TGG - Chr4:50529983-50530002 None:intergenic 35.0%
ATCCAACTGACATAGGATAA+AGG - Chr4:50529077-50529096 None:intergenic 35.0%
ATCGCAAATCATTATGGAGA+TGG + Chr4:50529544-50529563 MsG0480020916.01.T01:CDS 35.0%
ATCTACACCATGTCTATCAT+GGG + Chr4:50529719-50529738 MsG0480020916.01.T01:CDS 35.0%
ATGGAAGAGAAAAGAAAAGG+GGG + Chr4:50528617-50528636 MsG0480020916.01.T01:intron 35.0%
ATGTCCAAATCATTGGGATT+AGG + Chr4:50531057-50531076 MsG0480020916.01.T01:three_prime_UTR 35.0%
ATTCCCCCAAAATTCATACA+TGG - Chr4:50529616-50529635 None:intergenic 35.0%
CACTGTAAAACATGCATGTT+TGG - Chr4:50525588-50525607 None:intergenic 35.0%
CATGACAGGCTTCATATAAT+TGG + Chr4:50528107-50528126 MsG0480020916.01.T01:intron 35.0%
CATGGAAGAGAAAAGAAAAG+GGG + Chr4:50528616-50528635 MsG0480020916.01.T01:intron 35.0%
CCAAATTATTCCCTGACATA+GGG - Chr4:50527633-50527652 None:intergenic 35.0%
CCAATTCTTTGTTCAGATGT+AGG - Chr4:50525042-50525061 None:intergenic 35.0%
CCATACAACTAGGATTCAAT+AGG + Chr4:50528664-50528683 MsG0480020916.01.T01:intron 35.0%
CCTACATCTGAACAAAGAAT+TGG + Chr4:50525039-50525058 MsG0480020916.01.T01:intron 35.0%
CCTATGTCAGGGAATAATTT+GGG + Chr4:50527631-50527650 MsG0480020916.01.T01:intron 35.0%
CCTATTGAATCCTAGTTGTA+TGG - Chr4:50528667-50528686 None:intergenic 35.0%
CCTGCAAAAGTTGAATCAAA+TGG + Chr4:50527352-50527371 MsG0480020916.01.T01:intron 35.0%
CTAACTCGTCGTTATTAAGA+CGG - Chr4:50526209-50526228 None:intergenic 35.0%
CTGAACAAAGAATTGGAAAC+TGG + Chr4:50525046-50525065 MsG0480020916.01.T01:intron 35.0%
CTGTCAAAATTATGTTGCTC+TGG - Chr4:50529685-50529704 None:intergenic 35.0%
CTGTTTGTGCTTAAAAAGGT+CGG - Chr4:50530708-50530727 None:intergenic 35.0%
CTTCCGTATTTGTTCTTGTT+CGG - Chr4:50525463-50525482 None:intergenic 35.0%
CTTGCAGTCTTTACAAAACA+AGG + Chr4:50529174-50529193 MsG0480020916.01.T01:CDS 35.0%
CTTTACAAAACAAGGGATTC+TGG + Chr4:50529182-50529201 MsG0480020916.01.T01:CDS 35.0%
GAAACGTTAATCTTAACCGT+TGG + Chr4:50524997-50525016 MsG0480020916.01.T01:intron 35.0%
GAATTTCGTAATTGATGAGG+AGG + Chr4:50528281-50528300 MsG0480020916.01.T01:intron 35.0%
GCATCAATTAACCATTGATG+AGG - Chr4:50529283-50529302 None:intergenic 35.0%
GCATGGAAGAGAAAAGAAAA+GGG + Chr4:50528615-50528634 MsG0480020916.01.T01:intron 35.0%
GCTCAAGAATTATGAGTAAG+CGG - Chr4:50527037-50527056 None:intergenic 35.0%
GGAAAGATGGAATACACATT+TGG - Chr4:50526187-50526206 None:intergenic 35.0%
GGAATTTACCAAAGGAAATG+TGG + Chr4:50528697-50528716 MsG0480020916.01.T01:intron 35.0%
GGTTAATTGATGCAACTGAA+GGG + Chr4:50529290-50529309 MsG0480020916.01.T01:CDS 35.0%
GTATAAAATACAAGGGGAAG+AGG - Chr4:50528966-50528985 None:intergenic 35.0%
GTCAAACAATGAACTTTCAG+GGG - Chr4:50530615-50530634 None:intergenic 35.0%
GTGAAGCAAAAAACGTGAAA+GGG + Chr4:50524963-50524982 MsG0480020916.01.T01:intron 35.0%
GTGTCAAACAATGAACTTTC+AGG - Chr4:50530617-50530636 None:intergenic 35.0%
GTGTTATCTACTTTGCCATA+AGG - Chr4:50529859-50529878 None:intergenic 35.0%
GTTAATTGATGCAACTGAAG+GGG + Chr4:50529291-50529310 MsG0480020916.01.T01:CDS 35.0%
GTTATCTACTTTGCCATAAG+GGG - Chr4:50529857-50529876 None:intergenic 35.0%
TAACGTTCTACCATACAACT+AGG + Chr4:50528654-50528673 MsG0480020916.01.T01:intron 35.0%
TAACTCGTCGTTATTAAGAC+GGG - Chr4:50526208-50526227 None:intergenic 35.0%
TAAGCGGTTACCTTAGAAAA+TGG - Chr4:50527021-50527040 None:intergenic 35.0%
TAGACGAGACAAAAATGAGA+TGG + Chr4:50527849-50527868 MsG0480020916.01.T01:intron 35.0%
TAGGATATGAACCTCAATTG+AGG - Chr4:50526827-50526846 None:intergenic 35.0%
TATCTGCACTCATCAAAACT+GGG + Chr4:50525090-50525109 MsG0480020916.01.T01:intron 35.0%
TCAGTCATGTAACTATTCCA+AGG + Chr4:50530369-50530388 MsG0480020916.01.T01:CDS 35.0%
TCTATTGCTTGCTTCTTGTT+TGG - Chr4:50529325-50529344 None:intergenic 35.0%
TCTTTGCGCAAACTTAACTT+AGG + Chr4:50530901-50530920 MsG0480020916.01.T01:three_prime_UTR 35.0%
TGGTTAATTGATGCAACTGA+AGG + Chr4:50529289-50529308 MsG0480020916.01.T01:CDS 35.0%
TGTCACAGTCATATGTCATT+TGG + Chr4:50528474-50528493 MsG0480020916.01.T01:intron 35.0%
TTCCAAGGTTAGTAATCCAT+TGG + Chr4:50530384-50530403 MsG0480020916.01.T01:intron 35.0%
TTGGAAGGATTATCAAATGC+CGG - Chr4:50529244-50529263 None:intergenic 35.0%
TTGGTGCACCAAAAATTGTT+TGG - Chr4:50530643-50530662 None:intergenic 35.0%
! AAAGCATTTCGCATTTGGAA+AGG + Chr4:50530671-50530690 MsG0480020916.01.T01:CDS 35.0%
! ATTCATTGTTGTCGTTTCAG+TGG - Chr4:50525495-50525514 None:intergenic 35.0%
! CCATTTGATTCAACTTTTGC+AGG - Chr4:50527355-50527374 None:intergenic 35.0%
! GAAATGATTCTGAAGACCAT+TGG - Chr4:50530815-50530834 None:intergenic 35.0%
! GAACCATGTATGAATTTTGG+GGG + Chr4:50529610-50529629 MsG0480020916.01.T01:CDS 35.0%
! GATGCTTCATGTTTTCCTTT+TGG + Chr4:50527787-50527806 MsG0480020916.01.T01:intron 35.0%
! GCAAATGAAAGATCTAGTTC+AGG + Chr4:50529349-50529368 MsG0480020916.01.T01:CDS 35.0%
! GTTGGTTTCACTCAAAAGAT+TGG + Chr4:50531018-50531037 MsG0480020916.01.T01:three_prime_UTR 35.0%
! TGCTTCATGTTTTCCTTTTG+GGG + Chr4:50527789-50527808 MsG0480020916.01.T01:intron 35.0%
! TTGGTTCTTAAAACAACCGT+CGG - Chr4:50525390-50525409 None:intergenic 35.0%
! TTGTTGTTAGAGACCGAATT+GGG - Chr4:50527562-50527581 None:intergenic 35.0%
! TTTGAACTATGGCTTTACGA+TGG - Chr4:50525222-50525241 None:intergenic 35.0%
!! AATTTTGACAGGCAGAGTAT+GGG + Chr4:50529694-50529713 MsG0480020916.01.T01:CDS 35.0%
!! AGCAAGACTTGTTAATTTCG+GGG + Chr4:50531145-50531164 MsG0480020916.01.T01:three_prime_UTR 35.0%
!! AGGGTTTGGTGAGTATAAAA+TGG - Chr4:50528756-50528775 None:intergenic 35.0%
!! ATCAGAAAGCATTTCGCATT+TGG + Chr4:50530666-50530685 MsG0480020916.01.T01:CDS 35.0%
!! ATTTTAATGGGACTTGCCTA+TGG + Chr4:50529799-50529818 MsG0480020916.01.T01:CDS 35.0%
!! CAGAGCAACATAATTTTGAC+AGG + Chr4:50529683-50529702 MsG0480020916.01.T01:CDS 35.0%
!! GAGCAAGACTTGTTAATTTC+GGG + Chr4:50531144-50531163 MsG0480020916.01.T01:three_prime_UTR 35.0%
!! GGAGCAAGACTTGTTAATTT+CGG + Chr4:50531143-50531162 MsG0480020916.01.T01:three_prime_UTR 35.0%
!! GGGTTTGGTGAGTATAAAAT+GGG - Chr4:50528755-50528774 None:intergenic 35.0%
!! TAATTTTGACAGGCAGAGTA+TGG + Chr4:50529693-50529712 MsG0480020916.01.T01:CDS 35.0%
!! TACCAATGGATTACTAACCT+TGG - Chr4:50530389-50530408 None:intergenic 35.0%
!! TTTGTTGTTAGAGACCGAAT+TGG - Chr4:50527563-50527582 None:intergenic 35.0%
!!! AATTTTTTCGTGGCCCAATT+CGG + Chr4:50527546-50527565 MsG0480020916.01.T01:intron 35.0%
!!! CACTCGATTTTTTCTCATCT+AGG - Chr4:50526860-50526879 None:intergenic 35.0%
!!! CGATTTTTTCTCATCTAGGT+AGG - Chr4:50526856-50526875 None:intergenic 35.0%
!!! GGATGGCAATGTCATTTTAA+TGG + Chr4:50529786-50529805 MsG0480020916.01.T01:CDS 35.0%
!!! TTGTTTAGCTCTGTGACTTT+TGG + Chr4:50530980-50530999 MsG0480020916.01.T01:three_prime_UTR 35.0%
!!! TTTTTTCTCATCTAGGTAGG+TGG - Chr4:50526853-50526872 None:intergenic 35.0%
AAAAATGTGAGGGACTGAAG+TGG + Chr4:50527686-50527705 MsG0480020916.01.T01:intron 40.0%
AAAATGTGAGGGACTGAAGT+GGG + Chr4:50527687-50527706 MsG0480020916.01.T01:intron 40.0%
AAACCAGAATCAGAATCACC+AGG + Chr4:50525300-50525319 MsG0480020916.01.T01:intron 40.0%
AAACCCTTCTATACCCCATA+GGG + Chr4:50528769-50528788 MsG0480020916.01.T01:intron 40.0%
AACAGCTCATGAGAAAGAGT+TGG + Chr4:50530029-50530048 MsG0480020916.01.T01:CDS 40.0%
AACCAAAACGACCTCATCAA+TGG + Chr4:50529269-50529288 MsG0480020916.01.T01:CDS 40.0%
AACTGCTTGAGGCTAAATCA+TGG + Chr4:50525760-50525779 MsG0480020916.01.T01:intron 40.0%
AACTTTGTTCACCCTTGATG+TGG - Chr4:50528569-50528588 None:intergenic 40.0%
AAGGGATTCTGGATGGTAAA+AGG + Chr4:50529193-50529212 MsG0480020916.01.T01:CDS 40.0%
AAGTTCCATAATGCCCTATG+GGG - Chr4:50528785-50528804 None:intergenic 40.0%
AATTGAGGAAATCTCGTGGT+TGG - Chr4:50526812-50526831 None:intergenic 40.0%
ACAAAACAAGGGATTCTGGA+TGG + Chr4:50529186-50529205 MsG0480020916.01.T01:CDS 40.0%
ACCTAAAGATCTCGAGAATG+AGG + Chr4:50526371-50526390 MsG0480020916.01.T01:intron 40.0%
ACCTCATTCTCGAGATCTTT+AGG - Chr4:50526375-50526394 None:intergenic 40.0%
ACTTTGACCTATTTGCGAGA+GGG - Chr4:50527478-50527497 None:intergenic 40.0%
AGCACCTAATCCCAATGATT+TGG - Chr4:50531064-50531083 None:intergenic 40.0%
ATCAAGCTCCTGACATTAGT+AGG - Chr4:50530174-50530193 None:intergenic 40.0%
ATGAAAACCACTGGAAGATC+TGG + Chr4:50525687-50525706 MsG0480020916.01.T01:intron 40.0%
ATGAGGAGGCTCAAATTTGA+GGG + Chr4:50528295-50528314 MsG0480020916.01.T01:intron 40.0%
ATGATTTAGCCTCAAGCAGT+TGG - Chr4:50525761-50525780 None:intergenic 40.0%
ATTGAGGAAATCTCGTGGTT+GGG - Chr4:50526811-50526830 None:intergenic 40.0%
ATTTCTCCTACGCAAAACGA+AGG + Chr4:50526742-50526761 MsG0480020916.01.T01:intron 40.0%
CAACTGACATAGGATAAAGG+AGG - Chr4:50529074-50529093 None:intergenic 40.0%
CAAGTTCCATAATGCCCTAT+GGG - Chr4:50528786-50528805 None:intergenic 40.0%
CCCAAATTATTCCCTGACAT+AGG - Chr4:50527634-50527653 None:intergenic 40.0%
CCCTATGTCAGGGAATAATT+TGG + Chr4:50527630-50527649 MsG0480020916.01.T01:intron 40.0%
CGTGGCAAGTAAAATACCAA+CGG - Chr4:50525016-50525035 None:intergenic 40.0%
CGTTATTAAGACGGGAAAGA+TGG - Chr4:50526200-50526219 None:intergenic 40.0%
CTATTCCTCTCTCTTTCCTT+CGG + Chr4:50526893-50526912 MsG0480020916.01.T01:intron 40.0%
CTCCTTTATCCTATGTCAGT+TGG + Chr4:50529072-50529091 MsG0480020916.01.T01:intron 40.0%
GAAGATCTGGTGTTTGTTTG+AGG + Chr4:50525700-50525719 MsG0480020916.01.T01:intron 40.0%
GAAGGAAAGAGAGAGGAATA+GGG - Chr4:50526894-50526913 None:intergenic 40.0%
GACAAATTAGTCCCTATGTC+AGG + Chr4:50527619-50527638 MsG0480020916.01.T01:intron 40.0%
GACGAGACAAAAATGAGATG+GGG + Chr4:50527851-50527870 MsG0480020916.01.T01:intron 40.0%
GATCTACACCATGTCTATCA+TGG + Chr4:50529718-50529737 MsG0480020916.01.T01:CDS 40.0%
GCGCAAACTTAACTTAGGTT+AGG + Chr4:50530906-50530925 MsG0480020916.01.T01:three_prime_UTR 40.0%
GGCCACGAAAAAATTGTGAA+GGG - Chr4:50527541-50527560 None:intergenic 40.0%
GGTTTCACTCAAAAGATTGG+AGG + Chr4:50531021-50531040 MsG0480020916.01.T01:three_prime_UTR 40.0%
TAAGTTTGCGCAAAGATGGT+GGG - Chr4:50530897-50530916 None:intergenic 40.0%
TCAAGCTCCTGACATTAGTA+GGG - Chr4:50530173-50530192 None:intergenic 40.0%
TCAAGTTCCATAATGCCCTA+TGG - Chr4:50528787-50528806 None:intergenic 40.0%
TCAATCAGAAATCAAGGGTC+TGG - Chr4:50528010-50528029 None:intergenic 40.0%
TCATCTAGGTAGGTGGTAAT+AGG - Chr4:50526846-50526865 None:intergenic 40.0%
TCATGTTCGTGGGTGATTAA+AGG + Chr4:50531122-50531141 MsG0480020916.01.T01:three_prime_UTR 40.0%
TCCGTAAAAATCTCCGGTTA+GGG + Chr4:50526928-50526947 MsG0480020916.01.T01:intron 40.0%
TCTACACCATGTCTATCATG+GGG + Chr4:50529720-50529739 MsG0480020916.01.T01:CDS 40.0%
TCTAGAAAGCTCATGTTCGT+GGG + Chr4:50531112-50531131 MsG0480020916.01.T01:three_prime_UTR 40.0%
TCTGGATGGTAAAAGGATCT+GGG + Chr4:50529200-50529219 MsG0480020916.01.T01:CDS 40.0%
TGAAAAGAAACTAACCACCG+AGG + Chr4:50525359-50525378 MsG0480020916.01.T01:intron 40.0%
TGATCAGATCCCTACTAGTT+TGG - Chr4:50528838-50528857 None:intergenic 40.0%
TGCATGTTTGGGTACAAGTT+TGG - Chr4:50525576-50525595 None:intergenic 40.0%
TGTAGTTGCAAGTACTCCTT+TGG + Chr4:50530068-50530087 MsG0480020916.01.T01:CDS 40.0%
TGTTCCTGTGAAGTATGTCT+CGG + Chr4:50530215-50530234 MsG0480020916.01.T01:CDS 40.0%
TTAAGAGGGTAGACCCAATT+TGG + Chr4:50527515-50527534 MsG0480020916.01.T01:intron 40.0%
TTAAGTTTGCGCAAAGATGG+TGG - Chr4:50530898-50530917 None:intergenic 40.0%
TTCTGGATGGTAAAAGGATC+TGG + Chr4:50529199-50529218 MsG0480020916.01.T01:CDS 40.0%
TTGGAGAAACTACACCTACA+TGG - Chr4:50526713-50526732 None:intergenic 40.0%
TTGGTCAGAGTGTATACCAA+TGG - Chr4:50530403-50530422 None:intergenic 40.0%
TTTCTCCTACGCAAAACGAA+GGG + Chr4:50526743-50526762 MsG0480020916.01.T01:intron 40.0%
TTTGCGTAGGAGAAATTGGT+TGG - Chr4:50526738-50526757 None:intergenic 40.0%
! AACCATTGATGAGGTCGTTT+TGG - Chr4:50529274-50529293 None:intergenic 40.0%
! AATTGTCGCCGTTTACCTTT+TGG - Chr4:50525339-50525358 None:intergenic 40.0%
! ACCCTAACCGGAGATTTTTA+CGG - Chr4:50526932-50526951 None:intergenic 40.0%
! ATAGGGCATTATGGAACTTG+AGG + Chr4:50528786-50528805 MsG0480020916.01.T01:intron 40.0%
! CATATCATTAAGGGCATGAC+AGG + Chr4:50528093-50528112 MsG0480020916.01.T01:intron 40.0%
! CTGTTTTGCATGGTCTAATG+TGG - Chr4:50528538-50528557 None:intergenic 40.0%
! GATCAGATCCCTACTAGTTT+GGG - Chr4:50528837-50528856 None:intergenic 40.0%
! GATTATTTGGGTCTGAAACC+AGG + Chr4:50529455-50529474 MsG0480020916.01.T01:CDS 40.0%
! GATTCAATAGGTTGAGACTC+TGG + Chr4:50528676-50528695 MsG0480020916.01.T01:intron 40.0%
! TAACCGGAGATTTTTACGGA+CGG - Chr4:50526928-50526947 None:intergenic 40.0%
! TAGGAGAAATTGGTTGGTGT+TGG - Chr4:50526732-50526751 None:intergenic 40.0%
! TAGGGCATTATGGAACTTGA+GGG + Chr4:50528787-50528806 MsG0480020916.01.T01:intron 40.0%
! TATGGAGATGGTGCATCTTT+TGG + Chr4:50529556-50529575 MsG0480020916.01.T01:CDS 40.0%
! TCGTGAACTTGCTTCTGTAT+TGG - Chr4:50525131-50525150 None:intergenic 40.0%
! TCGTTTTGCGTAGGAGAAAT+TGG - Chr4:50526742-50526761 None:intergenic 40.0%
! TCTTCCAGTGGTTTTCATAG+TGG - Chr4:50525685-50525704 None:intergenic 40.0%
! TGGTGCATTGTGTAACTTGT+TGG + Chr4:50531000-50531019 MsG0480020916.01.T01:three_prime_UTR 40.0%
! TTCGAGTTTGAAAAGCATGC+TGG + Chr4:50530506-50530525 MsG0480020916.01.T01:CDS 40.0%
! TTTGGATTGGAAAGGATCGA+GGG + Chr4:50525791-50525810 MsG0480020916.01.T01:intron 40.0%
!! ACATTAGTAGGGAAGGTGTT+TGG - Chr4:50530162-50530181 None:intergenic 40.0%
!! GAGACTCTGGAATTTACCAA+AGG + Chr4:50528689-50528708 MsG0480020916.01.T01:intron 40.0%
!! GGTACAAGTTTGGTTCTTTC+TGG - Chr4:50525566-50525585 None:intergenic 40.0%
!! GTAGTTTGTTTCATCGTGAC+AGG - Chr4:50525162-50525181 None:intergenic 40.0%
!!! AGGTCGTTTTGGTTCGATTT+TGG - Chr4:50529263-50529282 None:intergenic 40.0%
!!! CGTTTTGGTTCGATTTTGGA+AGG - Chr4:50529259-50529278 None:intergenic 40.0%
!!! GGCTTTTTTGTTGTCACCAA+AGG - Chr4:50530087-50530106 None:intergenic 40.0%
!!! GTCCCTCACATTTTTTTTCG+CGG - Chr4:50527681-50527700 None:intergenic 40.0%
!!! TCCCTCACATTTTTTTTCGC+GGG - Chr4:50527680-50527699 None:intergenic 40.0%
AAACAGACTAACGGCTGCAT+AGG + Chr4:50530722-50530741 MsG0480020916.01.T01:intron 45.0%
AAAGAAACTAACCACCGAGG+CGG + Chr4:50525362-50525381 MsG0480020916.01.T01:intron 45.0%
AACTGGAGGAAGTAAGCAAC+TGG + Chr4:50525063-50525082 MsG0480020916.01.T01:intron 45.0%
AAGAGAAAAGAAAAGGGGGC+CGG + Chr4:50528621-50528640 MsG0480020916.01.T01:intron 45.0%
AAGTTTGCGCAAAGATGGTG+GGG - Chr4:50530896-50530915 None:intergenic 45.0%
AATGCCCTATGGGGTATAGA+AGG - Chr4:50528776-50528795 None:intergenic 45.0%
ACAAACACCAGATCTTCCAG+TGG - Chr4:50525697-50525716 None:intergenic 45.0%
ACACCTTCCCTACTAATGTC+AGG + Chr4:50530163-50530182 MsG0480020916.01.T01:CDS 45.0%
ACAGCACTTCATCCACATCA+AGG + Chr4:50528554-50528573 MsG0480020916.01.T01:intron 45.0%
ACTTGAGGGAGCAATCATTG+AGG + Chr4:50528801-50528820 MsG0480020916.01.T01:intron 45.0%
AGACGAGATCTGGATCAACA+GGG + Chr4:50529749-50529768 MsG0480020916.01.T01:CDS 45.0%
AGATAGCACCCTGTTCATCT+GGG - Chr4:50529945-50529964 None:intergenic 45.0%
ATCTGGTGTTTGTTTGAGGG+TGG + Chr4:50525704-50525723 MsG0480020916.01.T01:intron 45.0%
ATGCCCTATGGGGTATAGAA+GGG - Chr4:50528775-50528794 None:intergenic 45.0%
ATTCTCAACACTGCCCCAAA+AGG - Chr4:50527805-50527824 None:intergenic 45.0%
ATTTAGCCTCAAGCAGTTGG+TGG - Chr4:50525758-50525777 None:intergenic 45.0%
CAAACCCTTCTATACCCCAT+AGG + Chr4:50528768-50528787 MsG0480020916.01.T01:intron 45.0%
CAACTTCCCCATGATAGACA+TGG - Chr4:50529729-50529748 None:intergenic 45.0%
CACCACCACCAAAAGGTAAA+CGG + Chr4:50525328-50525347 MsG0480020916.01.T01:intron 45.0%
CAGCACTTCATCCACATCAA+GGG + Chr4:50528555-50528574 MsG0480020916.01.T01:intron 45.0%
CCAACTCAGTTAAGCTCACA+AGG + Chr4:50525875-50525894 MsG0480020916.01.T01:intron 45.0%
CCACGAGATTTCCTCAATTG+AGG + Chr4:50526813-50526832 MsG0480020916.01.T01:intron 45.0%
CCTCAATTGAGGAAATCTCG+TGG - Chr4:50526816-50526835 None:intergenic 45.0%
CCTTGTGAGCTTAACTGAGT+TGG - Chr4:50525878-50525897 None:intergenic 45.0%
CGAAGGAAAGAGAGAGGAAT+AGG - Chr4:50526895-50526914 None:intergenic 45.0%
CTAGAATCCATCAACCCATG+AGG - Chr4:50531257-50531276 None:intergenic 45.0%
CTAGTAGGGATCTGATCACA+TGG + Chr4:50528840-50528859 MsG0480020916.01.T01:intron 45.0%
CTATGGGGTATAGAAGGGTT+TGG - Chr4:50528770-50528789 None:intergenic 45.0%
GAACAACCATGCAAACCCAT+CGG + Chr4:50525632-50525651 MsG0480020916.01.T01:intron 45.0%
GACATTGCCATCCTTGTCAA+AGG - Chr4:50529779-50529798 None:intergenic 45.0%
GACTTTGACCTATTTGCGAG+AGG - Chr4:50527479-50527498 None:intergenic 45.0%
GATCTAAGCCCTACTAAAGG+TGG - Chr4:50526123-50526142 None:intergenic 45.0%
GATCTAAGTGCAGCGTTGTT+GGG - Chr4:50525273-50525292 None:intergenic 45.0%
GATGAGGAGGCTCAAATTTG+AGG + Chr4:50528294-50528313 MsG0480020916.01.T01:intron 45.0%
GCAAAAAACGTGAAAGGGAG+AGG + Chr4:50524968-50524987 MsG0480020916.01.T01:intron 45.0%
GCCCGCGAAAAAAAATGTGA+GGG + Chr4:50527676-50527695 MsG0480020916.01.T01:intron 45.0%
GCTAAATCCCTCTCGCAAAT+AGG + Chr4:50527468-50527487 MsG0480020916.01.T01:intron 45.0%
GGGCCACGAAAAAATTGTGA+AGG - Chr4:50527542-50527561 None:intergenic 45.0%
GGTGATCTAAGCCCTACTAA+AGG - Chr4:50526126-50526145 None:intergenic 45.0%
GGTTACACGATCTGTACCAT+CGG - Chr4:50526966-50526985 None:intergenic 45.0%
GTCAGGAGCTTGATATCTAC+TGG + Chr4:50530180-50530199 MsG0480020916.01.T01:CDS 45.0%
GTCCGTAAAAATCTCCGGTT+AGG + Chr4:50526927-50526946 MsG0480020916.01.T01:intron 45.0%
GTGGTATAAGTTTCCCGACA+TGG - Chr4:50529026-50529045 None:intergenic 45.0%
GTTTGTTTCATCGTGACAGG+AGG - Chr4:50525159-50525178 None:intergenic 45.0%
TCTGTACCATCGGAGATGAT+CGG - Chr4:50526956-50526975 None:intergenic 45.0%
TGACTGACACCCACAAAGAT+AGG - Chr4:50530356-50530375 None:intergenic 45.0%
TTATGGATGCAGGAACTTCG+TGG + Chr4:50530313-50530332 MsG0480020916.01.T01:intron 45.0%
TTCAGTGAAATTGACAGGCC+TGG - Chr4:50529476-50529495 None:intergenic 45.0%
TTGAGCTCGTTGAGATGGTA+GGG - Chr4:50526293-50526312 None:intergenic 45.0%
TTGAGGGATCTCAATCGTGT+TGG + Chr4:50527920-50527939 MsG0480020916.01.T01:intron 45.0%
TTGTTCAGATGTAGGACACG+TGG - Chr4:50525034-50525053 None:intergenic 45.0%
TTTGAGCTCGTTGAGATGGT+AGG - Chr4:50526294-50526313 None:intergenic 45.0%
! AGTTGTTCCTCATGGGTTGA+TGG + Chr4:50531247-50531266 MsG0480020916.01.T01:three_prime_UTR 45.0%
! CATTGTTGTCGTTTCAGTGG+TGG - Chr4:50525492-50525511 None:intergenic 45.0%
! CGTGAGCTTCAACGGATTTA+TGG + Chr4:50530846-50530865 MsG0480020916.01.T01:CDS 45.0%
! CTATACCCCATAGGGCATTA+TGG + Chr4:50528777-50528796 MsG0480020916.01.T01:intron 45.0%
! CTCTAGAAAGCTCATGTTCG+TGG + Chr4:50531111-50531130 MsG0480020916.01.T01:three_prime_UTR 45.0%
! GTTTGGATTGGAAAGGATCG+AGG + Chr4:50525790-50525809 MsG0480020916.01.T01:intron 45.0%
! TTCATAGTGGTTTTCCTCCC+TGG - Chr4:50525672-50525691 None:intergenic 45.0%
! TTGGGGCAGTGTTGAGAATT+AGG + Chr4:50527806-50527825 MsG0480020916.01.T01:intron 45.0%
!! TAATTTCGGGGCACTGAACT+CGG + Chr4:50531157-50531176 MsG0480020916.01.T01:three_prime_UTR 45.0%
!! TCGTGGTCGTAAACTTGTTG+TGG - Chr4:50525184-50525203 None:intergenic 45.0%
!! TCTTCCTTTTTCGCGTTACC+TGG - Chr4:50524933-50524952 None:intergenic 45.0%
!!! GGATGAAGTGCTGTTTTGCA+TGG - Chr4:50528548-50528567 None:intergenic 45.0%
!!! GGCCCTTCACAATTTTTTCG+TGG + Chr4:50527536-50527555 MsG0480020916.01.T01:intron 45.0%
!! AATAAAAAATTAAATTTATG+TGG + Chr4:50526666-50526685 MsG0480020916.01.T01:intron 5.0%
!! TAATTTATAAATTTATTGTT+AGG - Chr4:50525993-50526012 None:intergenic 5.0%
AACAGGGCAAGCCTTTGACA+AGG + Chr4:50529765-50529784 MsG0480020916.01.T01:CDS 50.0%
AATACCTACGTTTCGGGCGA+TGG + Chr4:50529499-50529518 MsG0480020916.01.T01:CDS 50.0%
ACAGAAGGTAGATAGCGCAG+TGG + Chr4:50524867-50524886 MsG0480020916.01.T01:CDS 50.0%
AGAACGTTACCTAGCATCCC+CGG - Chr4:50528643-50528662 None:intergenic 50.0%
AGAGAAAAGAAAAGGGGGCC+GGG + Chr4:50528622-50528641 MsG0480020916.01.T01:intron 50.0%
AGAGAGGAATAGGGTGTGTG+AGG - Chr4:50526885-50526904 None:intergenic 50.0%
CAGCAACACGTGAGCTTCAA+CGG + Chr4:50530838-50530857 MsG0480020916.01.T01:CDS 50.0%
CCTGCAACACGAAACAACGT+AGG - Chr4:50527265-50527284 None:intergenic 50.0%
CGAAAGAAGCTCTGCAACAG+AGG - Chr4:50526422-50526441 None:intergenic 50.0%
CGATCTAAGTGCAGCGTTGT+TGG - Chr4:50525274-50525293 None:intergenic 50.0%
CTACCTTCTGTCGTGTTACC+AGG - Chr4:50524858-50524877 None:intergenic 50.0%
GAAAGCCGAAGGAAAGAGAG+AGG - Chr4:50526901-50526920 None:intergenic 50.0%
GAGACGAGATCTGGATCAAC+AGG + Chr4:50529748-50529767 MsG0480020916.01.T01:CDS 50.0%
GAGATAGCACCCTGTTCATC+TGG - Chr4:50529946-50529965 None:intergenic 50.0%
GAGATGATCGGAACCCTAAC+CGG - Chr4:50526944-50526963 None:intergenic 50.0%
GCATGTTAGTGACAGAGAGC+CGG + Chr4:50529222-50529241 MsG0480020916.01.T01:CDS 50.0%
GCTCCTGACATTAGTAGGGA+AGG - Chr4:50530169-50530188 None:intergenic 50.0%
GCTTCCAGGTAACGCGAAAA+AGG + Chr4:50524926-50524945 MsG0480020916.01.T01:intron 50.0%
GGCCCGCGAAAAAAAATGTG+AGG + Chr4:50527675-50527694 MsG0480020916.01.T01:intron 50.0%
GGTCCTGGTGATTCTGATTC+TGG - Chr4:50525306-50525325 None:intergenic 50.0%
GTTTCATCGTGACAGGAGGT+GGG - Chr4:50525155-50525174 None:intergenic 50.0%
TCCCGACATGGCAGAGTATA+GGG - Chr4:50529014-50529033 None:intergenic 50.0%
TCCTGTGAAGTATGTCTCGG+TGG + Chr4:50530218-50530237 MsG0480020916.01.T01:CDS 50.0%
TGTTTCATCGTGACAGGAGG+TGG - Chr4:50525156-50525175 None:intergenic 50.0%
TTCCCGACATGGCAGAGTAT+AGG - Chr4:50529015-50529034 None:intergenic 50.0%
! ATAGTGGTTTTCCTCCCTGG+AGG - Chr4:50525669-50525688 None:intergenic 50.0%
! CCTACGTTGTTTCGTGTTGC+AGG + Chr4:50527262-50527281 MsG0480020916.01.T01:intron 50.0%
! CTGAACCCTTCGTTTTGCGT+AGG - Chr4:50526751-50526770 None:intergenic 50.0%
! GAACAGGGTGCTATCTCTGT+GGG + Chr4:50529949-50529968 MsG0480020916.01.T01:CDS 50.0%
! GGATCTCAATCGTGTTGGTG+AGG + Chr4:50527925-50527944 MsG0480020916.01.T01:intron 50.0%
! GGGCAGTGTTGAGAATTAGG+CGG + Chr4:50527809-50527828 MsG0480020916.01.T01:intron 50.0%
! TCTGGAGCTTGCACATCACT+AGG - Chr4:50529667-50529686 None:intergenic 50.0%
! TGAACAGGGTGCTATCTCTG+TGG + Chr4:50529948-50529967 MsG0480020916.01.T01:CDS 50.0%
! TGTCGCCGTTTACCTTTTGG+TGG - Chr4:50525336-50525355 None:intergenic 50.0%
! TTGCTTCTGGATCTAGAGCG+AGG + Chr4:50525816-50525835 MsG0480020916.01.T01:intron 50.0%
!! CAAAGATGGTGGGGACTTAG+AGG - Chr4:50530887-50530906 None:intergenic 50.0%
!! GGACTGTTTCAGTTGACTCG+TGG - Chr4:50525201-50525220 None:intergenic 50.0%
!! TTGCCATAAGGGGTGCCAAA+CGG - Chr4:50529847-50529866 None:intergenic 50.0%
!!! CGTTTACCTTTTGGTGGTGG+TGG - Chr4:50525330-50525349 None:intergenic 50.0%
!!! TTACCTTTTGGTGGTGGTGG+TGG - Chr4:50525327-50525346 None:intergenic 50.0%
AAGCCACACCAGTCACCACA+AGG + Chr4:50525535-50525554 MsG0480020916.01.T01:intron 55.0%
AGAACCATCGCCCGAAACGT+AGG - Chr4:50529506-50529525 None:intergenic 55.0%
AGACCGTTTGGCACCCCTTA+TGG + Chr4:50529841-50529860 MsG0480020916.01.T01:CDS 55.0%
AGGGTTCCGATCATCTCCGA+TGG + Chr4:50526947-50526966 MsG0480020916.01.T01:intron 55.0%
ATCGTGCCACCAACTGCTTG+AGG + Chr4:50525749-50525768 MsG0480020916.01.T01:intron 55.0%
ATGGCAGAGTATAGGGGGGA+AGG - Chr4:50529007-50529026 None:intergenic 55.0%
ATGGGACTTGCCTATGGCAG+TGG + Chr4:50529805-50529824 MsG0480020916.01.T01:CDS 55.0%
CCCCCTATACTCTGCCATGT+CGG + Chr4:50529009-50529028 MsG0480020916.01.T01:intron 55.0%
CCCCTATACTCTGCCATGTC+GGG + Chr4:50529010-50529029 MsG0480020916.01.T01:intron 55.0%
CCCGACATGGCAGAGTATAG+GGG - Chr4:50529013-50529032 None:intergenic 55.0%
CCGACATGGCAGAGTATAGG+GGG - Chr4:50529012-50529031 None:intergenic 55.0%
CCGCCGTCCGTAAAAATCTC+CGG + Chr4:50526922-50526941 MsG0480020916.01.T01:intron 55.0%
CGACATGGCAGAGTATAGGG+GGG - Chr4:50529011-50529030 None:intergenic 55.0%
CGTCCTGGTAACACGACAGA+AGG + Chr4:50524852-50524871 MsG0480020916.01.T01:CDS 55.0%
GAAGGTAGATAGCGCAGTGG+TGG + Chr4:50524870-50524889 MsG0480020916.01.T01:CDS 55.0%
GAGAAAAGAAAAGGGGGCCG+GGG + Chr4:50528623-50528642 MsG0480020916.01.T01:intron 55.0%
GATGCCCGTATCAGACCGTT+TGG + Chr4:50529829-50529848 MsG0480020916.01.T01:CDS 55.0%
GCCACCGAGACATACTTCAC+AGG - Chr4:50530222-50530241 None:intergenic 55.0%
GGCGTTTGAGCTCGTTGAGA+TGG - Chr4:50526298-50526317 None:intergenic 55.0%
GGGCAAGCCTTTGACAAGGA+TGG + Chr4:50529769-50529788 MsG0480020916.01.T01:CDS 55.0%
GGGGAAGTTGAGACGAGATC+TGG + Chr4:50529739-50529758 MsG0480020916.01.T01:CDS 55.0%
GGGTGCCAAACGGTCTGATA+CGG - Chr4:50529837-50529856 None:intergenic 55.0%
GGTGCCAAACGGTCTGATAC+GGG - Chr4:50529836-50529855 None:intergenic 55.0%
TGAAGTATGTCTCGGTGGCG+CGG + Chr4:50530223-50530242 MsG0480020916.01.T01:CDS 55.0%
TGGCAGAGTATAGGGGGGAA+GGG - Chr4:50529006-50529025 None:intergenic 55.0%
TGGGACTTGCCTATGGCAGT+GGG + Chr4:50529806-50529825 MsG0480020916.01.T01:CDS 55.0%
TTACCTGGAAGCCGTCGTGA+AGG - Chr4:50524918-50524937 None:intergenic 55.0%
! CCGGAGATTTTTACGGACGG+CGG - Chr4:50526925-50526944 None:intergenic 55.0%
! CGCCGTTTACCTTTTGGTGG+TGG - Chr4:50525333-50525352 None:intergenic 55.0%
! GGTGGGTTCCCAGATGAACA+GGG + Chr4:50529934-50529953 MsG0480020916.01.T01:CDS 55.0%
! TTCTTTCTGGCGCTGCCTTG+TGG - Chr4:50525553-50525572 None:intergenic 55.0%
!! TGGTGGGTTCCCAGATGAAC+AGG + Chr4:50529933-50529952 MsG0480020916.01.T01:CDS 55.0%
CAAACCCATCGGCGCTGCAA+TGG + Chr4:50525643-50525662 MsG0480020916.01.T01:intron 60.0%
CTGCCTTGTGGTGACTGGTG+TGG - Chr4:50525541-50525560 None:intergenic 60.0%
GAAGTATGTCTCGGTGGCGC+GGG + Chr4:50530224-50530243 MsG0480020916.01.T01:CDS 60.0%
GCGAATCACGTCGGAGCGAT+TGG + Chr4:50524892-50524911 MsG0480020916.01.T01:CDS 60.0%
GGACCACCACCACCACCAAA+AGG + Chr4:50525321-50525340 MsG0480020916.01.T01:intron 60.0%
GGGACTTGCCTATGGCAGTG+GGG + Chr4:50529807-50529826 MsG0480020916.01.T01:CDS 60.0%
! AGGGTGCTATCTCTGTGGGC+AGG + Chr4:50529953-50529972 MsG0480020916.01.T01:CDS 60.0%
! GCAGTGGTGGCGAATCACGT+CGG + Chr4:50524883-50524902 MsG0480020916.01.T01:CDS 60.0%
! GGGTGCTATCTCTGTGGGCA+GGG + Chr4:50529954-50529973 MsG0480020916.01.T01:CDS 60.0%
!! AGGATCGAGGGCGTTGCTTC+TGG + Chr4:50525803-50525822 MsG0480020916.01.T01:intron 60.0%
!! GGAGCGATTGGCCTTCACGA+CGG + Chr4:50524904-50524923 MsG0480020916.01.T01:CDS 60.0%
!! TTTGGTGGTGGTGGTGGTCC+TGG - Chr4:50525321-50525340 None:intergenic 60.0%
AAAAGGGGGCCGGGGATGCT+AGG + Chr4:50528631-50528650 MsG0480020916.01.T01:intron 65.0%
ACGGGCATCCCCACTGCCAT+AGG - Chr4:50529818-50529837 None:intergenic 65.0%
TGGCCTTCACGACGGCTTCC+AGG + Chr4:50524912-50524931 MsG0480020916.01.T01:CDS 65.0%
TGGCGCTGCCTTGTGGTGAC+TGG - Chr4:50525546-50525565 None:intergenic 65.0%
TTACCAGGACGCCGCCGTGA+AGG - Chr4:50524843-50524862 None:intergenic 65.0%
!! AACAACCGTCGGCTCCGCCT+CGG - Chr4:50525379-50525398 None:intergenic 65.0%
!! GAGGCCATTGCAGCGCCGAT+GGG - Chr4:50525650-50525669 None:intergenic 65.0%
!! GCAGCGCCGATGGGTTTGCA+TGG - Chr4:50525641-50525660 None:intergenic 65.0%
AACCACCGAGGCGGAGCCGA+CGG + Chr4:50525371-50525390 MsG0480020916.01.T01:intron 70.0%
CGCTGCAATGGCCTCCAGGG+AGG + Chr4:50525655-50525674 MsG0480020916.01.T01:intron 70.0%
CGGACGGCGGAGAAAGCCGA+AGG - Chr4:50526912-50526931 None:intergenic 70.0%
CGGCGCTGCAATGGCCTCCA+GGG + Chr4:50525652-50525671 MsG0480020916.01.T01:intron 70.0%
GTATGTCTCGGTGGCGCGGG+AGG + Chr4:50530227-50530246 MsG0480020916.01.T01:CDS 70.0%
TCGGCGCTGCAATGGCCTCC+AGG + Chr4:50525651-50525670 MsG0480020916.01.T01:intron 70.0%
! GGAGGCCATTGCAGCGCCGA+TGG - Chr4:50525651-50525670 None:intergenic 70.0%
!! AACCGTCGGCTCCGCCTCGG+TGG - Chr4:50525376-50525395 None:intergenic 75.0%
! GGGCCTTCACGGCGGCGTCC+TGG + Chr4:50524837-50524856 MsG0480020916.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 50524835 50531284 50524835 ID=MsG0480020916.01;Name=MsG0480020916.01
Chr4 mRNA 50524835 50531284 50524835 ID=MsG0480020916.01.T01;Parent=MsG0480020916.01;Name=MsG0480020916.01.T01;_AED=0.33;_eAED=0.34;_QI=0|0.75|0.6|0.8|0.5|0.4|5|394|518
Chr4 exon 50524835 50524933 50524835 ID=MsG0480020916.01.T01:exon:16634;Parent=MsG0480020916.01.T01
Chr4 exon 50529121 50530248 50529121 ID=MsG0480020916.01.T01:exon:16635;Parent=MsG0480020916.01.T01
Chr4 exon 50530325 50530390 50530325 ID=MsG0480020916.01.T01:exon:16636;Parent=MsG0480020916.01.T01
Chr4 exon 50530494 50530692 50530494 ID=MsG0480020916.01.T01:exon:16637;Parent=MsG0480020916.01.T01
Chr4 exon 50530826 50531284 50530826 ID=MsG0480020916.01.T01:exon:16638;Parent=MsG0480020916.01.T01
Chr4 CDS 50524835 50524933 50524835 ID=MsG0480020916.01.T01:cds;Parent=MsG0480020916.01.T01
Chr4 CDS 50529121 50530248 50529121 ID=MsG0480020916.01.T01:cds;Parent=MsG0480020916.01.T01
Chr4 CDS 50530325 50530390 50530325 ID=MsG0480020916.01.T01:cds;Parent=MsG0480020916.01.T01
Chr4 CDS 50530494 50530692 50530494 ID=MsG0480020916.01.T01:cds;Parent=MsG0480020916.01.T01
Chr4 CDS 50530826 50530890 50530826 ID=MsG0480020916.01.T01:cds;Parent=MsG0480020916.01.T01
Chr4 three_prime_UTR 50530891 50531284 50530891 ID=MsG0480020916.01.T01:three_prime_utr;Parent=MsG0480020916.01.T01
Gene Sequence

>MsG0480020916.01.T01

ATGGGCCTTCACGGCGGCGTCCTGGTAACACGACAGAAGGTAGATAGCGCAGTGGTGGCGAATCACGTCGGAGCGATTGGCCTTCACGACGGCTTCCAGACTTATTTTAAATGTACTATTGTATATGAAGCATTGTTGATTTATTTACTTTTCTTGCAGTCTTTACAAAACAAGGGATTCTGGATGGTAAAAGGATCTGGGCATGTTAGTGACAGAGAGCCGGCATTTGATAATCCTTCCAAAATCGAACCAAAACGACCTCATCAATGGTTAATTGATGCAACTGAAGGGGATTTTTTGCCAAACAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCAGGATTTTCAAATGTAAATTTTACTCCGTGGGAGAACAATCACAATTTTCATTCAGACCCAAGCCACCAAAATCAATTAATTGATCGATTATTTGGGTCTGAAACCAGGCCTGTCAATTTCACTGAAAAAAATACCTACGTTTCGGGCGATGGTTCTGATGTGAGATCAAAGATGATCGCAAATCATTATGGAGATGGTGCATCTTTTGGCTTGTCTATATCTCATTCTACTGAAGATTCTGAACCATGTATGAATTTTGGGGGAATCAAGAAAGTCAAAGTAAATCAGGTTAATCCTAGTGATGTGCAAGCTCCAGAGCAACATAATTTTGACAGGCAGAGTATGGGTGATCTACACCATGTCTATCATGGGGAAGTTGAGACGAGATCTGGATCAACAGGGCAAGCCTTTGACAAGGATGGCAATGTCATTTTAATGGGACTTGCCTATGGCAGTGGGGATGCCCGTATCAGACCGTTTGGCACCCCTTATGGCAAAGTAGATAACACAGTCCTATCCATTGCTGAATCTTATAATAAAGACGAGACAAATATAATTTCTTTTGGTGGGTTCCCAGATGAACAGGGTGCTATCTCTGTGGGCAGGGCTGCCACAGACTATGAACAGTCATATAATCAATCATCAGTTCATGTGTCAACAACAGCTCATGAGAAAGAGTTGGATGCATCAAATTCTGATGTAGTTGCAAGTACTCCTTTGGTGACAACAAAAAAGCCTGAATCTATGTCCAAGAATAAACAAGATATCAAATCAACAAGGAAAGAATCTCCAAACACCTTCCCTACTAATGTCAGGAGCTTGATATCTACTGGTATGCTAGATGGTGTTCCTGTGAAGTATGTCTCGGTGGCGCGGGAGGAACTTCGTGGAATTATAAAAGGAACTACCTATCTTTGTGGGTGTCAGTCATGTAACTATTCCAAGGGTCTGAATGCTTTCGAGTTTGAAAAGCATGCTGGTTGCAAATCAAAACATCCAAACAATCACATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCTGAAAGTTCATTGTTTGACACAATCCAAACAATTTTTGGTGCACCAATAAATCAGAAAGCATTTCGCATTTGGAAAGAATCATTTCAAGCAGCAACACGTGAGCTTCAACGGATTTATGGAAATGAAAAACGTAACCTCTAA
Protein sequence

>MsG0480020916.01.T01

MGLHGGVLVTRQKVDSAVVANHVGAIGLHDGFQTYFKCTIVYEALLIYLLFLQSLQNKGFWMVKGSGHVSDREPAFDNPSKIEPKRPHQWLIDATEGDFLPNKKQAIEDANERSSSGFSNVNFTPWENNHNFHSDPSHQNQLIDRLFGSETRPVNFTEKNTYVSGDGSDVRSKMIANHYGDGASFGLSISHSTEDSEPCMNFGGIKKVKVNQVNPSDVQAPEQHNFDRQSMGDLHHVYHGEVETRSGSTGQAFDKDGNVILMGLAYGSGDARIRPFGTPYGKVDNTVLSIAESYNKDETNIISFGGFPDEQGAISVGRAATDYEQSYNQSSVHVSTTAHEKELDASNSDVVASTPLVTTKKPESMSKNKQDIKSTRKESPNTFPTNVRSLISTGMLDGVPVKYVSVAREELRGIIKGTTYLCGCQSCNYSKGLNAFEFEKHAGCKSKHPNNHIYFENGKTIYQIVQELRSTPESSLFDTIQTIFGAPINQKAFRIWKESFQAATRELQRIYGNEKRNL*