AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048361.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048361.01.T01 MTR_3g047390 73.248 471 40 7 22 448 559 987 0.0 655
MsG0080048361.01.T01 MTR_7g005950 35.976 492 205 12 18 445 543 988 4.67e-86 288
MsG0080048361.01.T01 MTR_7g005950 35.976 492 205 12 18 445 543 988 7.12e-86 287
MsG0080048361.01.T01 MTR_2g061380 37.901 467 204 13 33 448 556 987 2.79e-81 274
MsG0080048361.01.T01 MTR_1g116370 35.378 489 203 14 18 448 546 979 1.83e-77 263
MsG0080048361.01.T01 MTR_3g096200 34.549 466 205 11 43 445 564 992 1.51e-71 246
MsG0080048361.01.T01 MTR_8g093630 33.333 474 206 12 43 445 568 1002 1.58e-69 240
MsG0080048361.01.T01 MTR_8g093630 34.895 427 198 10 43 398 568 985 1.93e-69 239
MsG0080048361.01.T01 MTR_2g072160 34.772 394 201 9 43 387 591 977 3.85e-64 224
MsG0080048361.01.T01 MTR_3g075180 34.237 295 180 6 118 404 680 968 2.13e-41 158
MsG0080048361.01.T01 MTR_3g075180 34.767 279 168 6 118 388 680 952 4.84e-41 157
MsG0080048361.01.T01 MTR_4g078220 28.718 390 202 7 81 404 421 800 6.64e-41 156
MsG0080048361.01.T01 MTR_1g116470 32.872 289 183 6 118 403 671 951 6.13e-40 154
MsG0080048361.01.T01 MTR_1g116470 32.000 300 176 7 118 403 671 956 6.54e-37 144
MsG0080048361.01.T01 MTR_2g090375 25.806 434 238 10 40 404 373 791 2.46e-35 140
MsG0080048361.01.T01 MTR_2g013580 27.344 384 208 8 67 386 413 789 2.16e-31 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048361.01.T01 AT3G59100 46.756 447 161 6 43 447 277 688 1.33e-122 391
MsG0080048361.01.T01 AT1G06490 45.714 455 161 8 40 447 580 995 1.65e-122 392
MsG0080048361.01.T01 AT1G06490 45.714 455 161 8 40 447 580 995 2.56e-122 392
MsG0080048361.01.T01 AT3G59100 46.756 447 161 6 43 447 574 985 2.86e-122 392
MsG0080048361.01.T01 AT5G13000 35.729 487 218 13 18 447 544 992 5.27e-85 285
MsG0080048361.01.T01 AT5G13000 35.729 487 218 13 18 447 544 992 7.99e-85 285
MsG0080048361.01.T01 AT2G13680 35.808 458 207 10 36 443 559 979 4.00e-79 268
MsG0080048361.01.T01 AT2G31960 36.111 432 210 10 18 392 538 960 3.49e-78 265
MsG0080048361.01.T01 AT2G31960 36.111 432 210 10 18 392 538 960 3.49e-78 265
MsG0080048361.01.T01 AT2G31960 36.111 432 210 10 18 392 538 960 3.49e-78 265
MsG0080048361.01.T01 AT2G31960 36.111 432 210 10 18 392 538 960 3.49e-78 265
MsG0080048361.01.T01 AT1G05570 39.500 400 176 10 50 392 570 960 6.94e-76 259
MsG0080048361.01.T01 AT1G05570 39.500 400 176 10 50 392 570 960 6.94e-76 259
MsG0080048361.01.T01 AT1G05570 39.500 400 176 10 50 392 570 960 6.94e-76 259
MsG0080048361.01.T01 AT3G14570 36.199 442 220 11 40 446 609 1023 2.71e-73 251
MsG0080048361.01.T01 AT3G14570 34.934 458 220 11 40 446 609 1039 2.71e-71 245
MsG0080048361.01.T01 AT3G14570 34.934 458 220 11 40 446 609 1039 3.87e-71 245
MsG0080048361.01.T01 AT2G31960 35.062 405 210 12 18 392 538 919 1.45e-66 231
MsG0080048361.01.T01 AT1G05570 38.070 373 178 12 50 392 570 919 3.35e-63 222
MsG0080048361.01.T01 AT5G36870 31.250 480 217 13 18 443 544 964 2.18e-56 202
MsG0080048361.01.T01 AT5G36870 31.185 481 217 13 18 443 544 965 2.33e-56 202
MsG0080048361.01.T01 AT5G36870 31.185 481 217 13 18 443 536 957 2.39e-56 202
MsG0080048361.01.T01 AT5G36870 31.185 481 217 13 18 443 536 957 2.39e-56 202
MsG0080048361.01.T01 AT5G36870 31.185 481 217 13 18 443 536 957 2.62e-56 202
MsG0080048361.01.T01 AT4G03550 27.209 430 231 11 36 398 389 803 1.07e-38 150
MsG0080048361.01.T01 AT2G36850 28.019 414 246 13 20 415 586 965 3.52e-38 148
MsG0080048361.01.T01 AT3G07160 30.492 305 182 8 102 387 647 940 1.32e-33 135
MsG0080048361.01.T01 AT3G07160 30.492 305 182 8 102 387 649 942 1.40e-33 135
MsG0080048361.01.T01 AT3G07160 30.492 305 182 8 102 387 649 942 1.40e-33 135
MsG0080048361.01.T01 AT4G04970 27.704 379 197 9 82 393 423 791 8.10e-32 129

Find 102 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGATCTTAATGAATATTT+TGG 0.146365 contig283end:-4748 MsG0080048361.01.T01:intron
TCACCAATTGGGCTGGGGAC+TGG 0.165337 contig283end:-3691 MsG0080048361.01.T01:CDS
CACCAATTGGGCTGGGGACT+GGG 0.182050 contig283end:-3690 MsG0080048361.01.T01:CDS
CCTGAGCCCACCACATTAAA+AGG 0.186031 contig283end:+3543 None:intergenic
AGTAGTGCAGCCACTATATT+TGG 0.227649 contig283end:+3623 None:intergenic
GGACCCAGTCAATTTATTAT+TGG 0.231211 contig283end:-3667 MsG0080048361.01.T01:CDS
AAGCATTCAGTGAAAGCTTT+TGG 0.251778 contig283end:-2218 MsG0080048361.01.T01:CDS
ACCAAACAAAGTGGCATAAA+TGG 0.261554 contig283end:+2492 None:intergenic
ACCAATTGGGCTGGGGACTG+GGG 0.263537 contig283end:-3689 MsG0080048361.01.T01:CDS
TTCTATGCATTCTTCAACTT+TGG 0.270741 contig283end:+1255 None:intergenic
TAAGTGTTGTCATTTCAATA+TGG 0.272014 contig283end:-2668 MsG0080048361.01.T01:CDS
CACTTTGTTTGGTGGGATTA+TGG 0.283422 contig283end:-2482 MsG0080048361.01.T01:CDS
GACCCAGTCAATTTATTATT+GGG 0.292899 contig283end:-3666 MsG0080048361.01.T01:CDS
AAGCTTTCACTGAATGCTTT+TGG 0.299545 contig283end:+2222 None:intergenic
GCCATTTATGCCACTTTGTT+TGG 0.302426 contig283end:-2493 MsG0080048361.01.T01:CDS
TTGCATACTTCTCTAATGTT+TGG 0.304272 contig283end:-2023 MsG0080048361.01.T01:CDS
CCACAACTCACCAGGATGAT+TGG 0.321278 contig283end:+2642 None:intergenic
CCAATTGGGCTGGGGACTGG+GGG 0.345756 contig283end:-3688 MsG0080048361.01.T01:CDS
TTATGGAGCTTTCAGCCATT+TGG 0.353154 contig283end:-2465 MsG0080048361.01.T01:CDS
TATGGAGCTTTCAGCCATTT+GGG 0.360894 contig283end:-2464 MsG0080048361.01.T01:CDS
TTATACAATTTGTCACCAAT+TGG 0.364514 contig283end:-3703 MsG0080048361.01.T01:CDS
AAGTGTTGTCATTTCAATAT+GGG 0.373323 contig283end:-2667 MsG0080048361.01.T01:CDS
TTACACAAGAGGCTGTTTCC+AGG 0.378319 contig283end:+1045 None:intergenic
CATAAAGTGTTACCGTTCTC+TGG 0.382568 contig283end:+2781 None:intergenic
AAGTTTGTGGTAGCAGCAAT+TGG 0.391476 contig283end:-3778 MsG0080048361.01.T01:CDS
AGGGGTAACCTTGGCGCAAC+TGG 0.392968 contig283end:-1108 MsG0080048361.01.T01:CDS
AATTATCATACAGGATGTTA+TGG 0.396479 contig283end:-787 MsG0080048361.01.T01:CDS
TCCATTCTTGCTTGCTAGCA+AGG 0.415243 contig283end:-1799 MsG0080048361.01.T01:intron
AGGAAGACCTCATCAGTAAC+AGG 0.419669 contig283end:-1975 MsG0080048361.01.T01:intron
ATTGCCATGATTAACTTTGT+TGG 0.430339 contig283end:+2838 None:intergenic
CAATTTGTCACCAATTGGGC+TGG 0.432731 contig283end:-3698 MsG0080048361.01.T01:CDS
ATACAGGATGTTATGGTTGA+TGG 0.433630 contig283end:-780 MsG0080048361.01.T01:CDS
TTATATGATTCCAAATATAG+TGG 0.436073 contig283end:-3633 MsG0080048361.01.T01:CDS
TATACAATTTGTCACCAATT+GGG 0.439841 contig283end:-3702 MsG0080048361.01.T01:CDS
TTCTGCTAGGTGCAGAAGAT+AGG 0.441836 contig283end:-1400 MsG0080048361.01.T01:CDS
TTCGCCATGTCCACAGCTAT+AGG 0.459725 contig283end:+1536 None:intergenic
TTTATGCCACTTTGTTTGGT+GGG 0.466096 contig283end:-2489 MsG0080048361.01.T01:CDS
CAGCCCAATAATAAATTGAC+TGG 0.467031 contig283end:+3663 None:intergenic
GTCTCTAGTCAATGTACTGC+AGG 0.467180 contig283end:-820 MsG0080048361.01.T01:CDS
TGAAATTTACTCAGTTGCTT+CGG 0.472268 contig283end:-3810 MsG0080048361.01.T01:intron
TAAGGTCACGGGTCAAGTCC+TGG 0.473761 contig283end:-1063 MsG0080048361.01.T01:CDS
AAAGAATATACAAGAGGAAT+CGG 0.478367 contig283end:-2181 MsG0080048361.01.T01:intron
GCAAGGCGAGTCATTCCAAC+TGG 0.479837 contig283end:-4780 MsG0080048361.01.T01:CDS
CAGCTCGCTGCCGATGGAAA+GGG 0.483693 contig283end:+859 None:intergenic
GGACTTGACCCGTGACCTTA+CGG 0.484422 contig283end:+1066 None:intergenic
GTCATGTGACCGTAAGGTCA+CGG 0.484873 contig283end:-1075 MsG0080048361.01.T01:CDS
ATCATCATAGTTTCTCCAGT+TGG 0.487400 contig283end:+4765 None:intergenic
ACCTTGCTAGCAAGCAAGAA+TGG 0.498009 contig283end:+1798 None:intergenic
AGTTCTCTGCAGAATCCAAC+TGG 0.498833 contig283end:-3728 MsG0080048361.01.T01:CDS
TTGAGCGTTCCAGTGTTCTC+CGG 0.500375 contig283end:+3582 None:intergenic
TATTGTAGAAATTATCATAC+AGG 0.500674 contig283end:-796 MsG0080048361.01.T01:CDS
TCAGCTCGCTGCCGATGGAA+AGG 0.508486 contig283end:+858 None:intergenic
ATTTATGCCACTTTGTTTGG+TGG 0.510069 contig283end:-2490 MsG0080048361.01.T01:CDS
GCAGGATGATGCATATGAAA+GGG 0.514653 contig283end:-2052 MsG0080048361.01.T01:intron
GCGAGCTGAAGACAGCAAGC+CGG 0.519337 contig283end:-844 MsG0080048361.01.T01:CDS
GTACAGATTGGAATCTTGAC+CGG 0.520364 contig283end:+2244 None:intergenic
AACTTTGTTGGTTCAATGAG+GGG 0.522017 contig283end:+2850 None:intergenic
GTCAAAGAATTCAAGATGAG+TGG 0.522053 contig283end:-1220 MsG0080048361.01.T01:CDS
TGAACCAACAAAGTTAATCA+TGG 0.522981 contig283end:-2842 MsG0080048361.01.T01:CDS
GTTTATAAATTCTATGAGAG+AGG 0.526728 contig283end:-1995 MsG0080048361.01.T01:CDS
AATTTGTCACCAATTGGGCT+GGG 0.529001 contig283end:-3697 MsG0080048361.01.T01:CDS
CGTTCCAGTGTTCTCCGGAT+AGG 0.532639 contig283end:+3587 None:intergenic
CTACGCATACCTCTCCCAAA+TGG 0.537336 contig283end:+2450 None:intergenic
AGCTTTCAGCCATTTGGGAG+AGG 0.541928 contig283end:-2459 MsG0080048361.01.T01:intron
TAAGGACACTCGGAATGCTC+CGG 0.542552 contig283end:-2263 MsG0080048361.01.T01:CDS
CAAGCAAGAATGGAGGCCAC+TGG 0.543489 contig283end:+1808 None:intergenic
CTGAGCCCACCACATTAAAA+GGG 0.552192 contig283end:+3544 None:intergenic
TGCAGGATGATGCATATGAA+AGG 0.552800 contig283end:-2053 MsG0080048361.01.T01:intron
CTCAGCTTCTCACTGAGTGA+AGG 0.553378 contig283end:+1193 None:intergenic
ACAAATTGTATAAGACCAGT+TGG 0.554559 contig283end:+3713 None:intergenic
TCATGTGACCGTAAGGTCAC+GGG 0.556129 contig283end:-1074 MsG0080048361.01.T01:CDS
TCCAGTGTTCTCCGGATAGG+TGG 0.557722 contig283end:+3590 None:intergenic
TGTCTTCAGCTCGCTGCCGA+TGG 0.558308 contig283end:+853 None:intergenic
GTTGTTGTCATGTGACCGTA+AGG 0.564546 contig283end:-1081 MsG0080048361.01.T01:CDS
AATTCCTTAAGGGGTAACCT+TGG 0.569763 contig283end:-1117 MsG0080048361.01.T01:intron
TAACTTTGTTGGTTCAATGA+GGG 0.577373 contig283end:+2849 None:intergenic
TCCACCTATCCGGAGAACAC+TGG 0.578465 contig283end:-3591 MsG0080048361.01.T01:CDS
ATTTGTCACCAATTGGGCTG+GGG 0.578794 contig283end:-3696 MsG0080048361.01.T01:CDS
GAAACATCAGTTGAACTGTA+CGG 0.581093 contig283end:+1837 None:intergenic
GATTCCTATAGCTGTGGACA+TGG 0.583007 contig283end:-1540 MsG0080048361.01.T01:CDS
AATATGGGCTCCAATCATCC+TGG 0.584309 contig283end:-2652 MsG0080048361.01.T01:CDS
AGTTTGTGGTAGCAGCAATT+GGG 0.584867 contig283end:-3777 MsG0080048361.01.T01:CDS
CAACTTTACCAGTTGCGCCA+AGG 0.585916 contig283end:+1100 None:intergenic
TATCTTCTGCACCTAGCAGA+AGG 0.587264 contig283end:+1402 None:intergenic
AAACAGAAAGAATATACAAG+AGG 0.596215 contig283end:-2187 MsG0080048361.01.T01:CDS
TTAACTTTGTTGGTTCAATG+AGG 0.597157 contig283end:+2848 None:intergenic
CATAATCCCACCAAACAAAG+TGG 0.600346 contig283end:+2483 None:intergenic
ATCTCTTAGATAAGGACACT+CGG 0.600410 contig283end:-2273 MsG0080048361.01.T01:intron
GTGTTCTCCGGATAGGTGGA+AGG 0.600960 contig283end:+3594 None:intergenic
CTGATGTTTCTGTCATCCAG+TGG 0.606723 contig283end:-1824 MsG0080048361.01.T01:CDS
GTGATAGATTCCTATAGCTG+TGG 0.607875 contig283end:-1546 MsG0080048361.01.T01:intron
CATGAAGTCTTTCCAGAGAA+CGG 0.608306 contig283end:-2793 MsG0080048361.01.T01:intron
ATTTGAACCTGTTACTGATG+AGG 0.610244 contig283end:+1968 None:intergenic
TGCATATAGATAACTATCAG+TGG 0.623343 contig283end:-2816 MsG0080048361.01.T01:CDS
ATCATACTGAGCCTTCTGCT+AGG 0.630216 contig283end:-1413 MsG0080048361.01.T01:CDS
AGAGAACTGCTAAAACAGAC+CGG 0.632261 contig283end:+3743 None:intergenic
CATGGCGAAAGATTATAAGA+AGG 0.636090 contig283end:-1522 MsG0080048361.01.T01:CDS
AGCCCAATAATAAATTGACT+GGG 0.636831 contig283end:+3664 None:intergenic
TCAAATCAATTCAATACACA+TGG 0.650313 contig283end:+757 None:intergenic
AGTACATTGACTAGAGACTC+CGG 0.665977 contig283end:+825 None:intergenic
CGAATGCTATGAGACTCTCA+AGG 0.691615 contig283end:-1438 MsG0080048361.01.T01:CDS
TTGCTAGCAAGCAAGAATGG+AGG 0.692919 contig283end:+1801 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAGAAACATTTAAAAA+CGG + contig283end:3034-3053 None:intergenic 10.0%
!! ATTATATATTGTAAATGTAA+AGG - contig283end:2235-2254 MsG0080048361.01.T01:CDS 10.0%
!! TATATTAAGAAAAAATCAAA+CGG + contig283end:4248-4267 None:intergenic 10.0%
!! TTACATTTACAATATATAAT+TGG + contig283end:2235-2254 None:intergenic 10.0%
!! TTTAAATGTTTCTTTAATAT+AGG - contig283end:3036-3055 MsG0080048361.01.T01:intron 10.0%
!!! AGTATTTTATTATATGATAT+AGG + contig283end:881-900 None:intergenic 10.0%
!!! TTTAATATAGGTTTATTTTA+TGG - contig283end:3048-3067 MsG0080048361.01.T01:intron 10.0%
!! AACTATATAGTAACAAATAA+CGG + contig283end:4443-4462 None:intergenic 15.0%
!! ATATTAAGAAAAAATCAAAC+GGG + contig283end:4247-4266 None:intergenic 15.0%
!! ATGAATTTATACTTCAATAA+AGG + contig283end:1230-1249 None:intergenic 15.0%
!! TGAGAAATTATTAACTTTAT+TGG - contig283end:4407-4426 MsG0080048361.01.T01:intron 15.0%
!!! ATTAAACTTTTTGGTATATT+TGG - contig283end:1123-1142 MsG0080048361.01.T01:intron 15.0%
!!! TTAAACTTTTTGGTATATTT+GGG - contig283end:1124-1143 MsG0080048361.01.T01:intron 15.0%
!! AAACAAAATGTATGTTATAG+CGG + contig283end:2440-2459 None:intergenic 20.0%
!! AGAAAAAAGCAAAGATATAT+CGG + contig283end:1625-1644 None:intergenic 20.0%
!! AGGAATTGAACTATAAAAAA+AGG + contig283end:4667-4686 None:intergenic 20.0%
!! ATAACACTGATATAAACTAT+TGG + contig283end:3834-3853 None:intergenic 20.0%
!! CTATTGATATTATTCTTATC+TGG - contig283end:1732-1751 MsG0080048361.01.T01:intron 20.0%
!! GGAATTGAACTATAAAAAAA+GGG + contig283end:4666-4685 None:intergenic 20.0%
!! TATATAGTTCAATTCCTTAA+GGG - contig283end:4454-4473 MsG0080048361.01.T01:intron 20.0%
!! TATATTGTAAATGTAAAGGT+CGG - contig283end:2239-2258 MsG0080048361.01.T01:CDS 20.0%
!! TATTGAAGTATAAATTCATG+TGG - contig283end:1231-1250 MsG0080048361.01.T01:CDS 20.0%
!! TATTGTAGAAATTATCATAC+AGG - contig283end:4785-4804 MsG0080048361.01.T01:CDS 20.0%
!! TTATATGATTCCAAATATAG+TGG - contig283end:1948-1967 MsG0080048361.01.T01:intron 20.0%
!! TTTAAAAAGATTAAGAGTGA+TGG - contig283end:4099-4118 MsG0080048361.01.T01:intron 20.0%
!! TTTGTCATAAGGTTATTTAA+AGG - contig283end:1654-1673 MsG0080048361.01.T01:intron 20.0%
!!! AAAAAAAGCGTTTATGTTTT+AGG - contig283end:2068-2087 MsG0080048361.01.T01:intron 20.0%
!!! AACAATGTTTAACTTTTAGT+TGG - contig283end:2284-2303 MsG0080048361.01.T01:intron 20.0%
!!! AATATAATCCTCATGATTTT+TGG - contig283end:4262-4281 MsG0080048361.01.T01:intron 20.0%
!!! AATGTGGATCTTTTTTATAT+TGG - contig283end:1354-1373 MsG0080048361.01.T01:intron 20.0%
!!! ATTTTATGGATACTCAAATA+TGG - contig283end:3062-3081 MsG0080048361.01.T01:intron 20.0%
!!! CTATAACATACATTTTGTTT+TGG - contig283end:2440-2459 MsG0080048361.01.T01:intron 20.0%
!!! GATGATCTTAATGAATATTT+TGG - contig283end:833-852 MsG0080048361.01.T01:CDS 20.0%
!!! TAAACTTCTTTTACGTTTTT+TGG - contig283end:914-933 MsG0080048361.01.T01:intron 20.0%
!!! TTAAACTGGATTAAACTTTT+TGG - contig283end:1114-1133 MsG0080048361.01.T01:intron 20.0%
!!! TTGTATAAACTTGTTTCAAT+TGG - contig283end:1181-1200 MsG0080048361.01.T01:intron 20.0%
! AAAACAAAGCATGCAATTTA+CGG + contig283end:2539-2558 None:intergenic 25.0%
! AAAATAGATATAGACCTGAT+TGG + contig283end:1052-1071 None:intergenic 25.0%
! AAACAGAAAGAATATACAAG+AGG - contig283end:3394-3413 MsG0080048361.01.T01:intron 25.0%
! AAAGAATATACAAGAGGAAT+CGG - contig283end:3400-3419 MsG0080048361.01.T01:intron 25.0%
! AAATTCCAAGTCTTAACTAA+AGG + contig283end:1430-1449 None:intergenic 25.0%
! AATCTATCACATAATCAAAG+CGG + contig283end:4025-4044 None:intergenic 25.0%
! AATCTTTATCTGATCGAAAT+TGG + contig283end:2353-2372 None:intergenic 25.0%
! AATTATCATACAGGATGTTA+TGG - contig283end:4794-4813 MsG0080048361.01.T01:CDS 25.0%
! AATTTCGATCAGATAAAGAT+TGG - contig283end:2352-2371 MsG0080048361.01.T01:intron 25.0%
! ACCATGTCAATTTATGTATT+AGG + contig283end:1087-1106 None:intergenic 25.0%
! AGATGCTAGTTAGAATTATT+AGG - contig283end:3482-3501 MsG0080048361.01.T01:intron 25.0%
! AGGCAATGATTATAATTTCA+TGG - contig283end:1492-1511 MsG0080048361.01.T01:CDS 25.0%
! ATAATTTCATGGAGTAACTT+GGG - contig283end:1503-1522 MsG0080048361.01.T01:CDS 25.0%
! ATATAGTTCAATTCCTTAAG+GGG - contig283end:4455-4474 MsG0080048361.01.T01:intron 25.0%
! ATCAAATTCAGTACTAATAC+TGG + contig283end:2580-2599 None:intergenic 25.0%
! ATCTTTATCTGATCGAAATT+GGG + contig283end:2352-2371 None:intergenic 25.0%
! ATTATTAGGAATCTTACCAA+TGG - contig283end:3496-3515 MsG0080048361.01.T01:intron 25.0%
! CTATATAGTTCAATTCCTTA+AGG - contig283end:4453-4472 MsG0080048361.01.T01:intron 25.0%
! GTTTATAAATTCTATGAGAG+AGG - contig283end:3586-3605 MsG0080048361.01.T01:CDS 25.0%
! TAAAGATTCCCAATCATAAA+TGG + contig283end:2312-2331 None:intergenic 25.0%
! TATAATTTCATGGAGTAACT+TGG - contig283end:1502-1521 MsG0080048361.01.T01:CDS 25.0%
! TATACAATTTGTCACCAATT+GGG - contig283end:1879-1898 MsG0080048361.01.T01:intron 25.0%
! TCCTAATACATAAATTGACA+TGG - contig283end:1083-1102 MsG0080048361.01.T01:CDS 25.0%
! TGATATAGGTAAAATATCAG+TGG + contig283end:867-886 None:intergenic 25.0%
! TTATACAATTTGTCACCAAT+TGG - contig283end:1878-1897 MsG0080048361.01.T01:intron 25.0%
!! AAGTGTTGTCATTTCAATAT+GGG - contig283end:2914-2933 MsG0080048361.01.T01:intron 25.0%
!! ATTTTTGCATCTCTTAGATA+AGG - contig283end:3300-3319 MsG0080048361.01.T01:intron 25.0%
!! TAAGTGTTGTCATTTCAATA+TGG - contig283end:2913-2932 MsG0080048361.01.T01:intron 25.0%
!! TTTTTGTTCTCGAAATTACA+AGG + contig283end:3183-3202 None:intergenic 25.0%
!!! AACTTCAACAAATTGGTTTT+AGG + contig283end:1299-1318 None:intergenic 25.0%
!!! CTTTTTTATATTGGCATTAC+AGG - contig283end:1363-1382 MsG0080048361.01.T01:intron 25.0%
!!! TAATTTTTTTCCCTTTCCAT+CGG - contig283end:4712-4731 MsG0080048361.01.T01:intron 25.0%
AAAAAGAAGTAACAAAGGCA+AGG - contig283end:784-803 MsG0080048361.01.T01:CDS 30.0%
AAGTATAAATTCATGTGGCA+GGG - contig283end:1236-1255 MsG0080048361.01.T01:CDS 30.0%
AATTCTAACTAGCATCTATG+TGG + contig283end:3479-3498 None:intergenic 30.0%
ACAAATTGTATAAGACCAGT+TGG + contig283end:1871-1890 None:intergenic 30.0%
AGCCCAATAATAAATTGACT+GGG + contig283end:1920-1939 None:intergenic 30.0%
AGGAGTGAAAAAAATACTGA+AGG - contig283end:1674-1693 MsG0080048361.01.T01:intron 30.0%
ATAGTTCAATTCCTTCATGA+TGG - contig283end:4673-4692 MsG0080048361.01.T01:intron 30.0%
ATTGCCATGATTAACTTTGT+TGG + contig283end:2746-2765 None:intergenic 30.0%
CTAAAGGCAACATAAAAAGA+TGG + contig283end:1414-1433 None:intergenic 30.0%
GAAACAAACCAAAAATCATG+AGG + contig283end:4273-4292 None:intergenic 30.0%
GAAGCAAAAAGAAGTAACAA+AGG - contig283end:779-798 MsG0080048361.01.T01:CDS 30.0%
GACCCAGTCAATTTATTATT+GGG - contig283end:1915-1934 MsG0080048361.01.T01:intron 30.0%
GTACTGTCATTATCAGAAAA+AGG + contig283end:3234-3253 None:intergenic 30.0%
TATTGCAGTCGATCTATAAA+TGG + contig283end:2623-2642 None:intergenic 30.0%
TGAAATTTACTCAGTTGCTT+CGG - contig283end:1771-1790 MsG0080048361.01.T01:intron 30.0%
TGAACCAACAAAGTTAATCA+TGG - contig283end:2739-2758 MsG0080048361.01.T01:intron 30.0%
TGCATATAGATAACTATCAG+TGG - contig283end:2765-2784 MsG0080048361.01.T01:intron 30.0%
TTACAGGTAACCTTAATACT+TGG - contig283end:1379-1398 MsG0080048361.01.T01:intron 30.0%
TTCTATGCATTCTTCAACTT+TGG + contig283end:4329-4348 None:intergenic 30.0%
TTGCATACTTCTCTAATGTT+TGG - contig283end:3558-3577 MsG0080048361.01.T01:CDS 30.0%
! AAACAAGTGTTGTCAAACAT+CGG + contig283end:3963-3982 None:intergenic 30.0%
! GAATCATTACCCTTTTAATG+TGG - contig283end:2028-2047 MsG0080048361.01.T01:CDS 30.0%
! GGTCTCTAAAAAAGTAATGT+AGG + contig283end:1209-1228 None:intergenic 30.0%
! GTACGTTTTTGCATCTTTAT+AGG - contig283end:1320-1339 MsG0080048361.01.T01:intron 30.0%
!! ACAAATGTTTTAAGCTAGGT+TGG - contig283end:974-993 MsG0080048361.01.T01:intron 30.0%
!! TAACTTTGTTGGTTCAATGA+GGG + contig283end:2735-2754 None:intergenic 30.0%
!! TTAACTTTGTTGGTTCAATG+AGG + contig283end:2736-2755 None:intergenic 30.0%
!! TTACGACAATCATTTTTCAC+AGG - contig283end:1472-1491 MsG0080048361.01.T01:CDS 30.0%
!!! AACATACATTTTGTTTTGGC+AGG - contig283end:2444-2463 MsG0080048361.01.T01:intron 30.0%
!!! AAGATATTTTAGCGAAGAAG+CGG + contig283end:3644-3663 None:intergenic 30.0%
ACATGGTTGTGTGATTAAAC+TGG - contig283end:1100-1119 MsG0080048361.01.T01:CDS 35.0%
ACCAAACAAAGTGGCATAAA+TGG + contig283end:3092-3111 None:intergenic 35.0%
ACGTACGAACTTCAACAAAT+TGG + contig283end:1306-1325 None:intergenic 35.0%
ACTATAAAAAAAGGGCAACC+CGG + contig283end:4658-4677 None:intergenic 35.0%
AGAAGATAGGCAGTAAGTAT+CGG - contig283end:4194-4213 MsG0080048361.01.T01:intron 35.0%
ATACAGGATGTTATGGTTGA+TGG - contig283end:4801-4820 MsG0080048361.01.T01:CDS 35.0%
ATCATCATAGTTTCTCCAGT+TGG + contig283end:819-838 None:intergenic 35.0%
ATCTCTTAGATAAGGACACT+CGG - contig283end:3308-3327 MsG0080048361.01.T01:intron 35.0%
ATTTGAACCTGTTACTGATG+AGG + contig283end:3616-3635 None:intergenic 35.0%
CAGCCCAATAATAAATTGAC+TGG + contig283end:1921-1940 None:intergenic 35.0%
CATGGCGAAAGATTATAAGA+AGG - contig283end:4059-4078 MsG0080048361.01.T01:intron 35.0%
CTTCAATAAGTCCATCATGA+AGG + contig283end:4687-4706 None:intergenic 35.0%
GAAACATCAGTTGAACTGTA+CGG + contig283end:3747-3766 None:intergenic 35.0%
GAAGTATAAATTCATGTGGC+AGG - contig283end:1235-1254 MsG0080048361.01.T01:CDS 35.0%
GAGGGGTGATATCTATTAAA+AGG + contig283end:2717-2736 None:intergenic 35.0%
GCTATTCTCAACTTTCTTCA+AGG - contig283end:1590-1609 MsG0080048361.01.T01:intron 35.0%
GGACCCAGTCAATTTATTAT+TGG - contig283end:1914-1933 MsG0080048361.01.T01:intron 35.0%
GTCAAAGAATTCAAGATGAG+TGG - contig283end:4361-4380 MsG0080048361.01.T01:intron 35.0%
TAATTGATCTGCAGTGTCTT+TGG - contig283end:3987-4006 MsG0080048361.01.T01:intron 35.0%
TCACATAATCAAAGCGGTTT+AGG + contig283end:4019-4038 None:intergenic 35.0%
TCTTGACTACTAACATTCCA+GGG - contig283end:3701-3720 MsG0080048361.01.T01:CDS 35.0%
TGTTGCCTTTAGTTAAGACT+TGG - contig283end:1422-1441 MsG0080048361.01.T01:CDS 35.0%
! AAATCTTTCCTTTTCCAGGT+CGG - contig283end:951-970 MsG0080048361.01.T01:intron 35.0%
! AAGCATTCAGTGAAAGCTTT+TGG - contig283end:3363-3382 MsG0080048361.01.T01:intron 35.0%
! AAGCTTTCACTGAATGCTTT+TGG + contig283end:3362-3381 None:intergenic 35.0%
! AAGTCTGAGTTGAGATTCAT+TGG + contig283end:1000-1019 None:intergenic 35.0%
! AGTTGGCTCCATTTATGATT+GGG - contig283end:2301-2320 MsG0080048361.01.T01:intron 35.0%
! CATTACCCTTTTAATGTGGT+GGG - contig283end:2032-2051 MsG0080048361.01.T01:CDS 35.0%
! TAAACGAAGCATCTGCATAA+AGG + contig283end:2102-2121 None:intergenic 35.0%
! TAGTTGGCTCCATTTATGAT+TGG - contig283end:2300-2319 MsG0080048361.01.T01:intron 35.0%
! TCAGTGTTATCGATTGTAAG+CGG - contig283end:3844-3863 MsG0080048361.01.T01:intron 35.0%
! TCATTACCCTTTTAATGTGG+TGG - contig283end:2031-2050 MsG0080048361.01.T01:CDS 35.0%
! TGAATGCTTTTGGTACAGAT+TGG + contig283end:3352-3371 None:intergenic 35.0%
! TTCTTATCTGGAATGCATTG+AGG - contig283end:1744-1763 MsG0080048361.01.T01:intron 35.0%
! TTGGTATATTTGGGAAGCAT+TGG - contig283end:1133-1152 MsG0080048361.01.T01:intron 35.0%
!! AACTTTGTTGGTTCAATGAG+GGG + contig283end:2734-2753 None:intergenic 35.0%
!! ATCTCAACTCAGACTTTTTC+AGG - contig283end:1004-1023 MsG0080048361.01.T01:intron 35.0%
!! ATTTATGCCACTTTGTTTGG+TGG - contig283end:3091-3110 MsG0080048361.01.T01:intron 35.0%
!! CTGCATCTACTTTTGTCATA+AGG - contig283end:1643-1662 MsG0080048361.01.T01:intron 35.0%
!! TCGGACAAATGTTTTAAGCT+AGG - contig283end:970-989 MsG0080048361.01.T01:intron 35.0%
!! TTGGTCTTGTTCTAATTGCT+TGG - contig283end:1152-1171 MsG0080048361.01.T01:intron 35.0%
!! TTTATGCCACTTTGTTTGGT+GGG - contig283end:3092-3111 MsG0080048361.01.T01:intron 35.0%
!!! TCGGTATTTTCTGAAGTTTG+TGG - contig283end:1790-1809 MsG0080048361.01.T01:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + contig283end:4550-4569 None:intergenic 35.0%
AAGTTTGTGGTAGCAGCAAT+TGG - contig283end:1803-1822 MsG0080048361.01.T01:CDS 40.0%
AATTCCTTAAGGGGTAACCT+TGG - contig283end:4464-4483 MsG0080048361.01.T01:intron 40.0%
AATTTGTCACCAATTGGGCT+GGG - contig283end:1884-1903 MsG0080048361.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - contig283end:4543-4562 MsG0080048361.01.T01:intron 40.0%
ACCAATGGAGTTTCTATTGC+AGG - contig283end:3511-3530 MsG0080048361.01.T01:intron 40.0%
ACTGCGTACAATACACCAAA+TGG - contig283end:4571-4590 MsG0080048361.01.T01:intron 40.0%
AGAGAACTGCTAAAACAGAC+CGG + contig283end:1841-1860 None:intergenic 40.0%
AGCATTCAGTTACTATGTGG+AGG - contig283end:2505-2524 MsG0080048361.01.T01:CDS 40.0%
AGTAGTGCAGCCACTATATT+TGG + contig283end:1961-1980 None:intergenic 40.0%
AGTTTGTGGTAGCAGCAATT+GGG - contig283end:1804-1823 MsG0080048361.01.T01:CDS 40.0%
ATAGGAGTTTCGATCGAATG+TGG - contig283end:1338-1357 MsG0080048361.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - contig283end:4544-4563 MsG0080048361.01.T01:intron 40.0%
CATAATCCCACCAAACAAAG+TGG + contig283end:3101-3120 None:intergenic 40.0%
CATGAAGTCTTTCCAGAGAA+CGG - contig283end:2788-2807 MsG0080048361.01.T01:intron 40.0%
CGTACAATACACCAAATGGT+GGG - contig283end:4575-4594 MsG0080048361.01.T01:intron 40.0%
CTCTTGACTACTAACATTCC+AGG - contig283end:3700-3719 MsG0080048361.01.T01:CDS 40.0%
CTTAAAACATTTGTCCGACC+TGG + contig283end:968-987 None:intergenic 40.0%
GACTGCAAGTCCAAGTATTA+AGG + contig283end:1392-1411 None:intergenic 40.0%
GCAGGATGATGCATATGAAA+GGG - contig283end:3529-3548 MsG0080048361.01.T01:intron 40.0%
GCTAGCATTCAGTTACTATG+TGG - contig283end:2502-2521 MsG0080048361.01.T01:CDS 40.0%
GGTTGTCAAGAAATCCACTA+TGG - contig283end:3937-3956 MsG0080048361.01.T01:intron 40.0%
GTACAGATTGGAATCTTGAC+CGG + contig283end:3340-3359 None:intergenic 40.0%
GTGATAGATTCCTATAGCTG+TGG - contig283end:4035-4054 MsG0080048361.01.T01:intron 40.0%
TATGGAGCTTTCAGCCATTT+GGG - contig283end:3117-3136 MsG0080048361.01.T01:intron 40.0%
TCCTGCAATAGAAACTCCAT+TGG + contig283end:3515-3534 None:intergenic 40.0%
TGCAGGATGATGCATATGAA+AGG - contig283end:3528-3547 MsG0080048361.01.T01:intron 40.0%
TGCAGTCGATCTATAAATGG+TGG + contig283end:2620-2639 None:intergenic 40.0%
TTATGGAGCTTTCAGCCATT+TGG - contig283end:3116-3135 MsG0080048361.01.T01:intron 40.0%
! AGTACATTGACTAGAGACTC+CGG + contig283end:4759-4778 None:intergenic 40.0%
! CACTTTGTTTGGTGGGATTA+TGG - contig283end:3099-3118 MsG0080048361.01.T01:intron 40.0%
! CATAAAGTGTTACCGTTCTC+TGG + contig283end:2803-2822 None:intergenic 40.0%
! GCTCAAATCTTTCCTTTTCC+AGG - contig283end:947-966 MsG0080048361.01.T01:intron 40.0%
! TGTTTTTCCTTCCACCTATC+CGG - contig283end:1980-1999 MsG0080048361.01.T01:CDS 40.0%
! TTCAGTGAAAGCTTTTGGAC+TGG - contig283end:3368-3387 MsG0080048361.01.T01:intron 40.0%
!! CATTGTTGACTTGACGCAAA+AGG + contig283end:2271-2290 None:intergenic 40.0%
!! GCCATTTATGCCACTTTGTT+TGG - contig283end:3088-3107 MsG0080048361.01.T01:intron 40.0%
!! GTCATTTGAGTTGCTCTGTA+AGG - contig283end:3808-3827 MsG0080048361.01.T01:intron 40.0%
!!! CAATTGGGTTGTTGTTTTGC+CGG - contig283end:1819-1838 MsG0080048361.01.T01:CDS 40.0%
AAGAAGCAAATCTCTGTCCC+TGG + contig283end:3721-3740 None:intergenic 45.0%
AATATGGGCTCCAATCATCC+TGG - contig283end:2929-2948 MsG0080048361.01.T01:intron 45.0%
ACATGCTCTCATGCATTCCT+CGG + contig283end:2165-2184 None:intergenic 45.0%
ACATTTGTCCGACCTGGAAA+AGG + contig283end:962-981 None:intergenic 45.0%
ACCTTGCTAGCAAGCAAGAA+TGG + contig283end:3786-3805 None:intergenic 45.0%
AGGAAGACCTCATCAGTAAC+AGG - contig283end:3606-3625 MsG0080048361.01.T01:CDS 45.0%
AGTTCTCTGCAGAATCCAAC+TGG - contig283end:1853-1872 MsG0080048361.01.T01:CDS 45.0%
ATCATACTGAGCCTTCTGCT+AGG - contig283end:4168-4187 MsG0080048361.01.T01:intron 45.0%
ATTTGTCACCAATTGGGCTG+GGG - contig283end:1885-1904 MsG0080048361.01.T01:intron 45.0%
CAATTTGTCACCAATTGGGC+TGG - contig283end:1883-1902 MsG0080048361.01.T01:intron 45.0%
CATCCTTCAGAAATTGGCCA+TGG - contig283end:3913-3932 MsG0080048361.01.T01:intron 45.0%
CCTCGGCCAACATACAATTT+CGG + contig283end:2148-2167 None:intergenic 45.0%
CGAATGCTATGAGACTCTCA+AGG - contig283end:4143-4162 MsG0080048361.01.T01:intron 45.0%
CGCTACCATCCTTCAGAAAT+TGG - contig283end:3907-3926 MsG0080048361.01.T01:intron 45.0%
CTGAGCCCACCACATTAAAA+GGG + contig283end:2040-2059 None:intergenic 45.0%
CTGCAGCCGAAATTGTATGT+TGG - contig283end:2139-2158 MsG0080048361.01.T01:intron 45.0%
GATTCCTATAGCTGTGGACA+TGG - contig283end:4041-4060 MsG0080048361.01.T01:intron 45.0%
GCGTACAATACACCAAATGG+TGG - contig283end:4574-4593 MsG0080048361.01.T01:intron 45.0%
GGATTTCTTGACAACCACCA+TGG + contig283end:3933-3952 None:intergenic 45.0%
GTCTCTAGTCAATGTACTGC+AGG - contig283end:4761-4780 MsG0080048361.01.T01:CDS 45.0%
GTTGTTGTCATGTGACCGTA+AGG - contig283end:4500-4519 MsG0080048361.01.T01:intron 45.0%
TATCTTCTGCACCTAGCAGA+AGG + contig283end:4182-4201 None:intergenic 45.0%
TGGAGTAACTTGGGACTTGT+TGG - contig283end:1512-1531 MsG0080048361.01.T01:CDS 45.0%
TTCTGCTAGGTGCAGAAGAT+AGG - contig283end:4181-4200 MsG0080048361.01.T01:intron 45.0%
TTGCTAGCAAGCAAGAATGG+AGG + contig283end:3783-3802 None:intergenic 45.0%
TTGTCAAACATCGGCCATAG+TGG + contig283end:3954-3973 None:intergenic 45.0%
! CATGGCCAATTTCTGAAGGA+TGG + contig283end:3915-3934 None:intergenic 45.0%
! CGGATTTTTGCCTTTCAGCA+TGG + contig283end:3871-3890 None:intergenic 45.0%
! CTGATGTTTCTGTCATCCAG+TGG - contig283end:3757-3776 MsG0080048361.01.T01:CDS 45.0%
! GGTAGCGACATGGTGTTTTA+CGG + contig283end:3894-3913 None:intergenic 45.0%
! TCCATTCTTGCTTGCTAGCA+AGG - contig283end:3782-3801 MsG0080048361.01.T01:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + contig283end:4539-4558 None:intergenic 45.0%
!! GTTTTAGGCTTCTTCTTCCC+AGG + contig283end:1284-1303 None:intergenic 45.0%
!! TTGCTTTTCCACAACTCACC+AGG + contig283end:2950-2969 None:intergenic 45.0%
AGCTTTCAGCCATTTGGGAG+AGG - contig283end:3122-3141 MsG0080048361.01.T01:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG + contig283end:4484-4503 None:intergenic 50.0%
CCAATCATCCTGGTGAGTTG+TGG - contig283end:2939-2958 MsG0080048361.01.T01:intron 50.0%
CCACAACTCACCAGGATGAT+TGG + contig283end:2942-2961 None:intergenic 50.0%
CCACCATGGCCAATTTCTGA+AGG + contig283end:3919-3938 None:intergenic 50.0%
CCGAAATTGTATGTTGGCCG+AGG - contig283end:2145-2164 MsG0080048361.01.T01:intron 50.0%
CCTGAGCCCACCACATTAAA+AGG + contig283end:2041-2060 None:intergenic 50.0%
CCTTCAGAAATTGGCCATGG+TGG - contig283end:3916-3935 MsG0080048361.01.T01:intron 50.0%
CTACGCATACCTCTCCCAAA+TGG + contig283end:3134-3153 None:intergenic 50.0%
CTCAGCTTCTCACTGAGTGA+AGG + contig283end:4391-4410 None:intergenic 50.0%
CTTCTTCTTCCCAGGTACAG+TGG + contig283end:1276-1295 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG - contig283end:4506-4525 MsG0080048361.01.T01:intron 50.0%
TAAGGACACTCGGAATGCTC+CGG - contig283end:3318-3337 MsG0080048361.01.T01:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG - contig283end:4507-4526 MsG0080048361.01.T01:intron 50.0%
TGAGACACAGACAGCCAATC+AGG - contig283end:1035-1054 MsG0080048361.01.T01:intron 50.0%
TGTAAGCGGACCATGCTGAA+AGG - contig283end:3858-3877 MsG0080048361.01.T01:intron 50.0%
TTCGCCATGTCCACAGCTAT+AGG + contig283end:4048-4067 None:intergenic 50.0%
TTGAGCGTTCCAGTGTTCTC+CGG + contig283end:2002-2021 None:intergenic 50.0%
! AGCGACATGGTGTTTTACGG+CGG + contig283end:3891-3910 None:intergenic 50.0%
! CAGAAGCATGACCCAGAAGA+GGG + contig283end:2474-2493 None:intergenic 50.0%
! TCAGAAGCATGACCCAGAAG+AGG + contig283end:2475-2494 None:intergenic 50.0%
! TCTGAAGGATGGTAGCGACA+TGG + contig283end:3904-3923 None:intergenic 50.0%
! TGTTGGAGTGCTCACTGATG+AGG - contig283end:1529-1548 MsG0080048361.01.T01:CDS 50.0%
!!! CCTTTTAATGTGGTGGGCTC+AGG - contig283end:2038-2057 MsG0080048361.01.T01:CDS 50.0%
AAATTCATGTGGCAGGGCCG+TGG - contig283end:1242-1261 MsG0080048361.01.T01:CDS 55.0%
CAAGCAAGAATGGAGGCCAC+TGG + contig283end:3776-3795 None:intergenic 55.0%
CGTTCCAGTGTTCTCCGGAT+AGG + contig283end:1997-2016 None:intergenic 55.0%
CTGAAGCTCCCGCATATGCA+GGG + contig283end:4614-4633 None:intergenic 55.0%
CTTCTTCCCAGGTACAGTGG+TGG + contig283end:1273-1292 None:intergenic 55.0%
GCAAGGCGAGTCATTCCAAC+TGG - contig283end:801-820 MsG0080048361.01.T01:CDS 55.0%
GGACTTGACCCGTGACCTTA+CGG + contig283end:4518-4537 None:intergenic 55.0%
GTGTTCTCCGGATAGGTGGA+AGG + contig283end:1990-2009 None:intergenic 55.0%
TAAGGTCACGGGTCAAGTCC+TGG - contig283end:4518-4537 MsG0080048361.01.T01:intron 55.0%
TCCACCTATCCGGAGAACAC+TGG - contig283end:1990-2009 MsG0080048361.01.T01:CDS 55.0%
TCCAGTGTTCTCCGGATAGG+TGG + contig283end:1994-2013 None:intergenic 55.0%
TCCCAGGTACAGTGGTGGTA+CGG + contig283end:1268-1287 None:intergenic 55.0%
TGCGCCAAGGTTACCCCTTA+AGG + contig283end:4471-4490 None:intergenic 55.0%
TGGCAGGTACACCCTCTTCT+GGG - contig283end:2460-2479 MsG0080048361.01.T01:CDS 55.0%
TTGGCAGGTACACCCTCTTC+TGG - contig283end:2459-2478 MsG0080048361.01.T01:intron 55.0%
!! TAATGTGGTGGGCTCAGGTC+AGG - contig283end:2043-2062 MsG0080048361.01.T01:CDS 55.0%
AGGGGTAACCTTGGCGCAAC+TGG - contig283end:4473-4492 MsG0080048361.01.T01:intron 60.0%
CAGCTCGCTGCCGATGGAAA+GGG + contig283end:4725-4744 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG + contig283end:4602-4621 None:intergenic 60.0%
CCTGAAGCTCCCGCATATGC+AGG + contig283end:4615-4634 None:intergenic 60.0%
CCTGCATATGCGGGAGCTTC+AGG - contig283end:4612-4631 MsG0080048361.01.T01:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG - contig283end:4602-4621 MsG0080048361.01.T01:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG + contig283end:4603-4622 None:intergenic 60.0%
GCCGTACCACCACTGTACCT+GGG - contig283end:1264-1283 MsG0080048361.01.T01:CDS 60.0%
GCGAGCTGAAGACAGCAAGC+CGG - contig283end:4737-4756 MsG0080048361.01.T01:intron 60.0%
GTACAGTGGTGGTACGGCCA+CGG + contig283end:1262-1281 None:intergenic 60.0%
TCAGCTCGCTGCCGATGGAA+AGG + contig283end:4726-4745 None:intergenic 60.0%
TGTCTTCAGCTCGCTGCCGA+TGG + contig283end:4731-4750 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - contig283end:4603-4622 MsG0080048361.01.T01:intron 60.0%
! ACCAATTGGGCTGGGGACTG+GGG - contig283end:1892-1911 MsG0080048361.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - contig283end:4587-4606 MsG0080048361.01.T01:intron 60.0%
! CACCAATTGGGCTGGGGACT+GGG - contig283end:1891-1910 MsG0080048361.01.T01:intron 60.0%
! TCACCAATTGGGCTGGGGAC+TGG - contig283end:1890-1909 MsG0080048361.01.T01:intron 60.0%
CGCATATGCAGGGTCCGGGA+AGG + contig283end:4604-4623 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + contig283end:4589-4608 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + contig283end:4608-4627 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + contig283end:4609-4628 None:intergenic 65.0%
GGCCGTACCACCACTGTACC+TGG - contig283end:1263-1282 MsG0080048361.01.T01:CDS 65.0%
! CCAATTGGGCTGGGGACTGG+GGG - contig283end:1893-1912 MsG0080048361.01.T01:intron 65.0%
ACCGCGGGAGCTTCAGGCAC+CGG - contig283end:4636-4655 MsG0080048361.01.T01:intron 70.0%
CCCCCAGTCCCCAGCCCAAT+TGG + contig283end:1896-1915 None:intergenic 70.0%
! TCAGGCACCGCGGGAGCTTC+AGG - contig283end:4630-4649 MsG0080048361.01.T01:intron 70.0%
! TGCGGGAGCTTCAGGCACCG+CGG - contig283end:4620-4639 MsG0080048361.01.T01:intron 70.0%
CCCGGTGCCTGAAGCTCCCG+CGG + contig283end:4640-4659 None:intergenic 75.0%
CCGCGGGAGCTTCAGGCACC+GGG - contig283end:4637-4656 MsG0080048361.01.T01:intron 75.0%
! GCGGGAGCTTCAGGCACCGC+GGG - contig283end:4621-4640 MsG0080048361.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
contig283end gene 767 4836 767 ID=MsG0080048361.01;Name=MsG0080048361.01
contig283end mRNA 767 4836 767 ID=MsG0080048361.01.T01;Parent=MsG0080048361.01;Name=MsG0080048361.01.T01;_AED=0.50;_eAED=0.55;_QI=0|0|0|0.91|0.63|0.66|12|0|449
contig283end exon 4749 4836 4749 ID=MsG0080048361.01.T01:exon:24820;Parent=MsG0080048361.01.T01
contig283end exon 3544 3818 3544 ID=MsG0080048361.01.T01:exon:24821;Parent=MsG0080048361.01.T01
contig283end exon 2794 2878 2794 ID=MsG0080048361.01.T01:exon:24822;Parent=MsG0080048361.01.T01
contig283end exon 2646 2702 2646 ID=MsG0080048361.01.T01:exon:24823;Parent=MsG0080048361.01.T01
contig283end exon 2460 2545 2460 ID=MsG0080048361.01.T01:exon:24824;Parent=MsG0080048361.01.T01
contig283end exon 2182 2286 2182 ID=MsG0080048361.01.T01:exon:24825;Parent=MsG0080048361.01.T01
contig283end exon 1976 2070 1976 ID=MsG0080048361.01.T01:exon:24826;Parent=MsG0080048361.01.T01
contig283end exon 1800 1881 1800 ID=MsG0080048361.01.T01:exon:24827;Parent=MsG0080048361.01.T01
contig283end exon 1398 1561 1398 ID=MsG0080048361.01.T01:exon:24828;Parent=MsG0080048361.01.T01
contig283end exon 1206 1297 1206 ID=MsG0080048361.01.T01:exon:24829;Parent=MsG0080048361.01.T01
contig283end exon 1038 1128 1038 ID=MsG0080048361.01.T01:exon:24830;Parent=MsG0080048361.01.T01
contig283end exon 767 896 767 ID=MsG0080048361.01.T01:exon:24831;Parent=MsG0080048361.01.T01
contig283end CDS 4749 4836 4749 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 3544 3818 3544 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 2794 2878 2794 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 2646 2702 2646 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 2460 2545 2460 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 2182 2286 2182 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 1976 2070 1976 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 1800 1881 1800 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 1398 1561 1398 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 1206 1297 1206 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 1038 1128 1038 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
contig283end CDS 767 896 767 ID=MsG0080048361.01.T01:cds;Parent=MsG0080048361.01.T01
Gene Sequence

>MsG0080048361.01.T01

TTGGTGACAAAGGAAGCAAAAAGAAGTAACAAAGGCAAGGCGAGTCATTCCAACTGGAGAAACTATGATGATCTTAATGAATATTTTGTTGCTTCGGTATTTTCTGAAGTTTGTGGTAGCAGCAATTGGGTTGTTGTTTTGCCGGTCTGTTTTAGCAGTTCTCTGCAGAATCCAACTGGTCTTATACAATTTGTCACCAATTGGGCTGGGGACTGGGGGACCCAGTCAATTTATTATTGGGCTGTTGCGATTTATATGATTCCAAATATAGTGGCTGCACTACTGTTTTTCCTTCCACCTATCCGGAGAACACTGGAACGCTCAAATATGCGAATCATTACCCTTTTAATGTGGTGGGCTCAGATATCACCCCTCATTGAACCAACAAAGTTAATCATGGCAATGCATATAGATAACTATCAGTGGCATGAAGTCTTTCCAGAGAACGATATGCACAATTTAAGTGTTGTCATTTCAATATGGGCTCCAATCATCCTGGTGAGTTGTTTATTTTATGGATACTCAAATATGGTATGCCATTTATGCCACTTTGTTTGGTGGGATTATGGAGCTTTCAGCCATTTGGGAGAGATAAGGACACTCGGAATGCTCCGGTCAAGATTCCAATCTGTACCAAAAGCATTCAGTGAAAGCTTTTGGACTGGAAGAAACAGAAAGAATATACAAGAGGAATCGGATGATGCATATGAAAGGGATAATATTGCATACTTCTCTAATGTTTGGAATGAGTTTATAAATTCTATGAGAGAGGAAGACCTCATCAGTAACAGGGACAGAGATTTGCTTCTTGTTCCGTACAGTTCAACTGATGTTTCTGTCATCCAGTGGCCTCCATTCTTGCTTGCTAGCAAGATTCCTATAGCTGTGGACATGGCGAAAGATTATAAGAAGGACGACGATGCTGAATTGTTTAAAAAGATTAAGAGTGATGGTTATATGTACTCAGCAGTTGTCGAATGCTATGAGACTCTCAAGGACATCATACTGAGCCTTCTGCTAGGTGCAGAAGATAGGCATTTCATAGAGCTCATATGCGCCAAAGTTGAAGAATGCATAGAAGACGAAGTATTTGTCAAAGAATTCAAGATGAGTGGCTTGCCTTCACTCAGGGTAACCTTGGCGCAACTGGTAAAGTTGTTGTCATGTGACCGTAAGGTCACGGGTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGGTCTTCTAATTTTTTTCCCTTTCCATCGGCAGCGAGCTGAAGACAGCAAGCCGGAGTCTCTAGTCAATGTACTGCAGGATATTGTAGAAATTATCATACAGGATGTTATGGTTGATGGCCATGTGTATTGA
Protein sequence

>MsG0080048361.01.T01

LVTKEAKRSNKGKASHSNWRNYDDLNEYFVASVFSEVCGSSNWVVVLPVCFSSSLQNPTGLIQFVTNWAGDWGTQSIYYWAVAIYMIPNIVAALLFFLPPIRRTLERSNMRIITLLMWWAQISPLIEPTKLIMAMHIDNYQWHEVFPENDMHNLSVVISIWAPIILVSCLFYGYSNMVCHLCHFVWWDYGAFSHLGEIRTLGMLRSRFQSVPKAFSESFWTGRNRKNIQEESDDAYERDNIAYFSNVWNEFINSMREEDLISNRDRDLLLVPYSSTDVSVIQWPPFLLASKIPIAVDMAKDYKKDDDAELFKKIKSDGYMYSAVVECYETLKDIILSLLLGAEDRHFIELICAKVEECIEDEVFVKEFKMSGLPSLRVTLAQLVKLLSCDRKVTGQVLETASCVKTGLLIFFPFHRQRAEDSKPESLVNVLQDIVEIIIQDVMVDGHVY*