AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048650.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048650.01.T01 MTR_4g090970 99.365 630 3 1 1 630 1 629 0.0 1303
MsG0080048650.01.T01 MTR_2g011810 77.603 634 138 2 1 630 1 634 0.0 1019
MsG0080048650.01.T01 MTR_4g128600 64.399 632 199 9 15 629 14 636 0.0 811
MsG0080048650.01.T01 MTR_2g450080 54.735 623 239 10 12 628 8 593 0.0 637
MsG0080048650.01.T01 MTR_8g104510 46.193 394 198 6 13 397 2 390 2.33e-114 350
MsG0080048650.01.T01 MTR_6g083730 41.955 491 253 12 13 479 2 484 1.40e-112 346
MsG0080048650.01.T01 MTR_8g104490 46.134 388 193 5 13 389 2 384 3.29e-112 345
MsG0080048650.01.T01 MTR_4g106810 45.558 439 226 8 17 447 2 435 7.70e-112 346
MsG0080048650.01.T01 MTR_8g104490 47.797 295 150 2 96 389 28 319 5.22e-95 298
MsG0080048650.01.T01 MTR_6g083320 48.993 298 140 5 13 299 2 298 4.11e-90 286
MsG0080048650.01.T01 MTR_7g112000 34.550 411 220 13 55 450 44 420 5.82e-59 206
MsG0080048650.01.T01 MTR_7g111980 35.103 339 201 8 47 379 51 376 1.81e-46 173
MsG0080048650.01.T01 MTR_7g111960 34.024 338 200 8 55 381 60 385 3.63e-45 169
MsG0080048650.01.T01 MTR_7g111980 37.024 289 172 6 96 379 10 293 5.25e-44 164
MsG0080048650.01.T01 MTR_6g083810 45.522 134 61 5 13 135 2 134 3.94e-23 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048650.01.T01 AT5G57580 61.442 638 206 12 15 625 13 637 0.0 751
MsG0080048650.01.T01 AT4G25800 62.019 624 185 12 24 630 9 597 0.0 740
MsG0080048650.01.T01 AT4G25800 62.019 624 185 12 24 630 9 597 0.0 740
MsG0080048650.01.T01 AT2G18750 58.488 648 221 11 1 629 1 619 0.0 736
MsG0080048650.01.T01 AT2G18750 58.488 648 221 11 1 629 1 619 0.0 736
MsG0080048650.01.T01 AT2G18750 58.488 648 221 11 1 629 1 619 0.0 736
MsG0080048650.01.T01 AT2G24300 53.333 615 247 11 25 628 18 603 0.0 610
MsG0080048650.01.T01 AT2G24300 53.333 615 247 11 25 628 14 599 0.0 610
MsG0080048650.01.T01 AT4G31000 50.977 614 222 12 25 628 18 562 0.0 573
MsG0080048650.01.T01 AT2G24300 52.265 574 237 10 63 628 8 552 0.0 555
MsG0080048650.01.T01 AT4G31000 45.440 614 235 13 25 628 18 541 5.09e-165 483
MsG0080048650.01.T01 AT5G62570 47.967 369 183 6 24 389 15 377 6.57e-112 345
MsG0080048650.01.T01 AT5G62570 46.739 368 187 6 24 388 15 376 2.20e-110 337
MsG0080048650.01.T01 AT5G62570 48.596 356 174 6 37 389 13 362 4.98e-110 340
MsG0080048650.01.T01 AT1G73805 43.655 394 196 13 33 419 27 401 7.65e-91 289
MsG0080048650.01.T01 AT5G62570 50.357 280 131 5 24 301 15 288 6.65e-87 273
MsG0080048650.01.T01 AT5G26920 37.466 371 218 5 38 407 28 385 1.17e-75 248
MsG0080048650.01.T01 AT5G26920 37.466 371 218 5 38 407 28 385 1.31e-74 249
MsG0080048650.01.T01 AT5G26920 36.927 371 212 6 38 407 28 377 1.04e-71 241

Find 196 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTTCCCGCCAGTAAAA+AGG 0.203080 contig389end:-21605 None:intergenic
GAAACCTGGATTGGTTTATT+TGG 0.224264 contig389end:+24482 MsG0080048650.01.T01:three_prime_UTR
CAACTTCAAAGAAGTGAAAA+TGG 0.241246 contig389end:+23924 MsG0080048650.01.T01:CDS
CTAGGTCCCACCAAGCTTAA+TGG 0.270553 contig389end:+21176 MsG0080048650.01.T01:CDS
ATCTTTCTTATGTAGATTCT+TGG 0.271515 contig389end:+22351 MsG0080048650.01.T01:intron
CATTCTGCTAATACCTTGTT+TGG 0.293015 contig389end:-20111 None:intergenic
CGTCAATTGCTTGATTGAAT+AGG 0.296767 contig389end:+24791 MsG0080048650.01.T01:three_prime_UTR
AAAATGCGTTATCATCAAAT+TGG 0.299882 contig389end:-23863 None:intergenic
GCACAACTGATTAAGAATTA+TGG 0.309088 contig389end:-24534 None:intergenic
GCTTGAAAGATCGCATGTTT+TGG 0.314452 contig389end:+24653 MsG0080048650.01.T01:three_prime_UTR
ATAATGAGGACGATGAAAAT+TGG 0.321922 contig389end:+21748 MsG0080048650.01.T01:CDS
TGAAGAAAGCATATGATAAT+TGG 0.328947 contig389end:+23117 MsG0080048650.01.T01:CDS
CGATCTGCAAGTTATATTAA+AGG 0.329553 contig389end:+21836 MsG0080048650.01.T01:CDS
GGCAGCCATACATATTGTTT+TGG 0.333368 contig389end:+21641 MsG0080048650.01.T01:CDS
TGAAAGAACGTGAAGGAAAA+AGG 0.334477 contig389end:+21799 MsG0080048650.01.T01:CDS
AACAGTGAAAGCTTCTGATT+TGG 0.334732 contig389end:-21982 None:intergenic
CACTTCTTTGAAGTTGAGCT+TGG 0.344968 contig389end:-23917 None:intergenic
TTGTAGCTCATGTTGTTTGC+AGG 0.346018 contig389end:-24185 None:intergenic
ATCAGAAGCTTTCACTGTTA+AGG 0.352594 contig389end:+21986 MsG0080048650.01.T01:CDS
GAAGGTTGGCCTGTATTTAC+TGG 0.353894 contig389end:-23284 None:intergenic
CTGGGCCTGACGTGACAATA+TGG 0.357739 contig389end:-21680 None:intergenic
GGTCTCTGATAACAAGTCTT+AGG 0.357889 contig389end:-22223 None:intergenic
TGTTGTGTTGTGTGTGTAGT+AGG 0.363924 contig389end:-20055 None:intergenic
CTTACAACTCTGCGTAGAAT+AGG 0.366420 contig389end:-20413 None:intergenic
TGCTCATCCTCAGGCTCTCA+TGG 0.367536 contig389end:+23205 MsG0080048650.01.T01:CDS
TTCCTGAGATTTCACGCTTT+AGG 0.371236 contig389end:-24710 None:intergenic
CCCCACATTTCTTGCATCCT+CGG 0.372526 contig389end:-22460 None:intergenic
CTAATACGTATTTCTTCCTC+TGG 0.373734 contig389end:-24038 None:intergenic
AAGAACAAATACATCTAGTT+TGG 0.377151 contig389end:-21712 None:intergenic
TTTACTGGCGGGAAAGTAGA+AGG 0.384990 contig389end:+21609 MsG0080048650.01.T01:CDS
TCTAGTTTGGCACATGACTC+TGG 0.387351 contig389end:-21699 None:intergenic
CGGCCTTGCATGATGAGGTT+TGG 0.387698 contig389end:+22123 MsG0080048650.01.T01:CDS
CTGCATACTATCCACCTTCA+AGG 0.390498 contig389end:-20369 None:intergenic
CTAGATGTATTTGTTCTTGA+GGG 0.392152 contig389end:+21717 MsG0080048650.01.T01:CDS
TCCTCGGGCAAAGCTGTTGT+GGG 0.396443 contig389end:+24230 MsG0080048650.01.T01:CDS
TCTTCTCCAAAGCGCATAGA+AGG 0.396583 contig389end:+21531 MsG0080048650.01.T01:CDS
TTTATGTTCTCAATTTGAAT+TGG 0.397463 contig389end:+24865 MsG0080048650.01.T01:three_prime_UTR
CGGGCAAAGCTGTTGTGGGC+TGG 0.400583 contig389end:+24234 MsG0080048650.01.T01:CDS
TAGGTCCCACCAAGCTTAAT+GGG 0.401085 contig389end:+21177 MsG0080048650.01.T01:CDS
TTACTGGATGTGGCAAACTA+TGG 0.402100 contig389end:-23268 None:intergenic
TCTTTCTTATGTAGATTCTT+GGG 0.403004 contig389end:+22352 MsG0080048650.01.T01:intron
TAGGGCGGAGAAGAGAAGTT+TGG 0.406515 contig389end:+20163 MsG0080048650.01.T01:CDS
GGCATGTATGCAGATGGATT+AGG 0.406799 contig389end:-24164 None:intergenic
TGATCGGAAACGACCTGCTT+TGG 0.409072 contig389end:+20214 MsG0080048650.01.T01:CDS
TTCTTTGAAGTTGAGCTTGG+TGG 0.410617 contig389end:-23914 None:intergenic
TCGGGGCCTTCTATGCGCTT+TGG 0.416408 contig389end:-21537 None:intergenic
CTGACAACTCCAGTTGGATA+AGG 0.417279 contig389end:+21892 MsG0080048650.01.T01:CDS
AATTGTAAATTATTGTCATC+GGG 0.421222 contig389end:-21555 None:intergenic
CTCCTCGGGCAAAGCTGTTG+TGG 0.424764 contig389end:+24229 MsG0080048650.01.T01:CDS
TGAAGAAGTGGAGCGTGCTT+TGG 0.427217 contig389end:+21148 MsG0080048650.01.T01:CDS
GATTCCACTTCTGCTGAAGA+TGG 0.432531 contig389end:+20185 MsG0080048650.01.T01:CDS
TTGAGCAAGGGCATGAAACC+TGG 0.434346 contig389end:+24468 MsG0080048650.01.T01:three_prime_UTR
TCTTTCAATTCCCACGAAGA+TGG 0.434601 contig389end:+24137 MsG0080048650.01.T01:CDS
GTTGCTCCTGTATCCATTGA+AGG 0.434943 contig389end:-23302 None:intergenic
TGTGGGCTGGCTCAAGCTTA+AGG 0.435478 contig389end:+24247 MsG0080048650.01.T01:CDS
GTTTCTATTGCAGGTTTATG+TGG 0.438320 contig389end:+23085 MsG0080048650.01.T01:intron
GAGAATCAGCTGAGTGATAC+TGG 0.440984 contig389end:-22530 None:intergenic
AAATACAGGCCAACCTTCAA+TGG 0.441468 contig389end:+23289 MsG0080048650.01.T01:CDS
GCATGTATGCAGATGGATTA+GGG 0.444130 contig389end:-24163 None:intergenic
CTTCCTACTCCTTATCCAAC+TGG 0.446989 contig389end:-21901 None:intergenic
AATTTGAAATGCTGGCAGTC+TGG 0.447809 contig389end:-23986 None:intergenic
AAAGCAGGTCGTTTCCGATC+AGG 0.448193 contig389end:-20212 None:intergenic
AGGAGTAGGAAGTTCAGATT+GGG 0.448651 contig389end:+21912 MsG0080048650.01.T01:CDS
GAATTGGTGTGATGACTACT+TGG 0.455754 contig389end:+24881 MsG0080048650.01.T01:three_prime_UTR
GTAAGTAGAATTTGAAATGC+TGG 0.458447 contig389end:-23994 None:intergenic
AACCCGTGTGTTACTGTTTG+TGG 0.458824 contig389end:-23963 None:intergenic
GTTTGGAGACTGGAGAAGAT+TGG 0.459512 contig389end:+22140 MsG0080048650.01.T01:CDS
TGTGATTGTTGAAGCCTTGA+AGG 0.462803 contig389end:+20355 MsG0080048650.01.T01:CDS
CCCACATTTCTTGCATCCTC+GGG 0.466596 contig389end:-22459 None:intergenic
CTTTCAATTCCCACGAAGAT+GGG 0.466934 contig389end:+24138 MsG0080048650.01.T01:CDS
ATCAACCAAAACAATATGTA+TGG 0.469814 contig389end:-21646 None:intergenic
CTCCTGTATCCATTGAAGGT+TGG 0.470512 contig389end:-23298 None:intergenic
CTGAAGATGGTCAGCCTGAT+CGG 0.470951 contig389end:+20198 MsG0080048650.01.T01:CDS
TCTTTGAAGTTGAGCTTGGT+GGG 0.474459 contig389end:-23913 None:intergenic
AGCTTAAGGCAGCTTTGAGA+TGG 0.477017 contig389end:+24261 MsG0080048650.01.T01:CDS
TTTGGAACCTGCTCATCCTC+AGG 0.477671 contig389end:+23196 MsG0080048650.01.T01:CDS
TAATGTTGAGAAATTAGCCT+TGG 0.479384 contig389end:-24409 None:intergenic
GTATTAAGTTTGAATACTCA+TGG 0.479574 contig389end:-23232 None:intergenic
GCATGATGAGGTTTGGAGAC+TGG 0.484113 contig389end:+22130 MsG0080048650.01.T01:CDS
AAGGAGTAGGAAGTTCAGAT+TGG 0.484403 contig389end:+21911 MsG0080048650.01.T01:CDS
CAATTGTAAATTATTGTCAT+CGG 0.484942 contig389end:-21556 None:intergenic
GTCTCTACTAAATTACAATC+AGG 0.488606 contig389end:+23166 MsG0080048650.01.T01:CDS
GTCCTAAAGCGTGAAATCTC+AGG 0.488734 contig389end:+24708 MsG0080048650.01.T01:three_prime_UTR
AGGATGGTTCCTTTCACAAA+AGG 0.490250 contig389end:+22165 MsG0080048650.01.T01:CDS
AACTTCAAAGAAGTGAAAAT+GGG 0.494858 contig389end:+23925 MsG0080048650.01.T01:CDS
TTGCCACATCCAGTAAATAC+AGG 0.495007 contig389end:+23275 MsG0080048650.01.T01:CDS
GGTGGGGAACACTCATCAGC+TGG 0.498211 contig389end:-23896 None:intergenic
AATTAGATGACTCTTGATCC+TGG 0.501393 contig389end:+24333 MsG0080048650.01.T01:exon
ACTAGATGTATTTGTTCTTG+AGG 0.505473 contig389end:+21716 MsG0080048650.01.T01:CDS
CTGGAGAAGATTGGTAAGGA+TGG 0.505500 contig389end:+22149 MsG0080048650.01.T01:CDS
TTGGGGCTGAAAGTTTCCTC+AGG 0.506119 contig389end:+21930 MsG0080048650.01.T01:CDS
CAAGGGCATGAAACCTGGAT+TGG 0.508639 contig389end:+24473 MsG0080048650.01.T01:three_prime_UTR
TTCTCTCTCTGAGAGTCAAA+AGG 0.509605 contig389end:+22548 MsG0080048650.01.T01:CDS
ATTAGTATTCTGTGATTGCA+TGG 0.512283 contig389end:-23826 None:intergenic
GCTTAAGGCAGCTTTGAGAT+GGG 0.515225 contig389end:+24262 MsG0080048650.01.T01:CDS
GGCCAACCTTCAATGGATAC+AGG 0.515482 contig389end:+23296 MsG0080048650.01.T01:CDS
GAGACTGGAGAAGATTGGTA+AGG 0.515902 contig389end:+22145 MsG0080048650.01.T01:CDS
CCCGAGGATGCAAGAAATGT+GGG 0.517046 contig389end:+22459 MsG0080048650.01.T01:CDS
ATTATACCTCCCATTAAGCT+TGG 0.517672 contig389end:-21186 None:intergenic
ACGTTGATCATCATGTAGCT+AGG 0.518132 contig389end:+20144 MsG0080048650.01.T01:CDS
GCTCATCCTCAGGCTCTCAT+GGG 0.518303 contig389end:+23206 MsG0080048650.01.T01:CDS
CACAAAAGGCTAAATAAAGC+AGG 0.518999 contig389end:+22179 MsG0080048650.01.T01:CDS
CTTTGAAGTTGAGCTTGGTG+GGG 0.521569 contig389end:-23912 None:intergenic
TTTACACGTTAATGATGGGT+GGG 0.524076 contig389end:-24620 None:intergenic
ATGAGAGCCTGAGGATGAGC+AGG 0.524169 contig389end:-23203 None:intergenic
AAAGGATGGTGTAGGAACAC+TGG 0.526677 contig389end:+21854 MsG0080048650.01.T01:CDS
ATGCACGTTATTGAGTATGA+TGG 0.527033 contig389end:+23140 MsG0080048650.01.T01:CDS
CTGACCATCTTCAGCAGAAG+TGG 0.529403 contig389end:-20189 None:intergenic
TGGCCTGTATTTACTGGATG+TGG 0.534932 contig389end:-23278 None:intergenic
GCTACGAAGTTTGAGCAAGA+TGG 0.534983 contig389end:-24439 None:intergenic
ACAGGCCATATTGTCACGTC+AGG 0.535118 contig389end:+21675 MsG0080048650.01.T01:CDS
CTAGTTTGGCACATGACTCT+GGG 0.535530 contig389end:-21698 None:intergenic
TTGATTAACCTAGCCAAAGC+AGG 0.536860 contig389end:-20227 None:intergenic
GGGAAAGTAGAAGGTGAGCA+AGG 0.540107 contig389end:+21618 MsG0080048650.01.T01:CDS
CTGTGATTGCATGGAGAAGC+TGG 0.540929 contig389end:-23817 None:intergenic
CATTTACTGACAACTCCAGT+TGG 0.541343 contig389end:+21886 MsG0080048650.01.T01:CDS
GTTATATTAAAGGATGGTGT+AGG 0.543007 contig389end:+21846 MsG0080048650.01.T01:CDS
GAAGAAGGCTGCTGACAGAC+GGG 0.544326 contig389end:+24298 MsG0080048650.01.T01:CDS
AGCACCAAATAAACCAATCC+AGG 0.545622 contig389end:-24486 None:intergenic
GGCTTCCCATGTTAAACATA+CGG 0.545819 contig389end:-24103 None:intergenic
AATCACATTTATGAATTGAG+CGG 0.549042 contig389end:+22492 MsG0080048650.01.T01:CDS
TACCTCCCATTAAGCTTGGT+GGG 0.550426 contig389end:-21182 None:intergenic
TTTGCTCCGTATGTTTAACA+TGG 0.552386 contig389end:+24097 MsG0080048650.01.T01:CDS
TTTGCAGGCATGTATGCAGA+TGG 0.554899 contig389end:-24170 None:intergenic
GGAAGAAGGCTGCTGACAGA+CGG 0.555602 contig389end:+24297 MsG0080048650.01.T01:CDS
ACCTCATCATGCAAGGCCGG+TGG 0.557048 contig389end:-22119 None:intergenic
GGAAACGACCTGCTTTGGCT+AGG 0.557280 contig389end:+20219 MsG0080048650.01.T01:CDS
TCGTAGCACGACTTTGAGCA+AGG 0.558333 contig389end:+24455 MsG0080048650.01.T01:three_prime_UTR
CAAACCTCATCATGCAAGGC+CGG 0.558896 contig389end:-22122 None:intergenic
ATACCTCCCATTAAGCTTGG+TGG 0.562645 contig389end:-21183 None:intergenic
GGAAAGTAGAAGGTGAGCAA+GGG 0.563214 contig389end:+21619 MsG0080048650.01.T01:CDS
GAGCGTGCTTTGGCAAAACT+AGG 0.563474 contig389end:+21158 MsG0080048650.01.T01:CDS
AGTGAAAATGGGATGATGCT+TGG 0.563707 contig389end:+23936 MsG0080048650.01.T01:CDS
GATACAGGAGCAACAGTTGG+AGG 0.566308 contig389end:+23311 MsG0080048650.01.T01:CDS
ATGTCTGCAGGTTATCATGA+TGG 0.567312 contig389end:+23786 MsG0080048650.01.T01:intron
CGTTGATCATCATGTAGCTA+GGG 0.569340 contig389end:+20145 MsG0080048650.01.T01:CDS
AAGGATGGTGTAGGAACACT+GGG 0.570410 contig389end:+21855 MsG0080048650.01.T01:CDS
TTTGTCTGAGGAACCAAACA+AGG 0.572527 contig389end:+20098 MsG0080048650.01.T01:five_prime_UTR
ATTACCGTTACAGATCATAA+CGG 0.574070 contig389end:-24369 None:intergenic
GATTAGGGTACCCATCTTCG+TGG 0.574153 contig389end:-24148 None:intergenic
TTACATTACGCAATCTCTGA+GGG 0.574332 contig389end:-22244 None:intergenic
TCCCGAGGATGCAAGAAATG+TGG 0.574766 contig389end:+22458 MsG0080048650.01.T01:CDS
ATGGATACAGGAGCAACAGT+TGG 0.574946 contig389end:+23308 MsG0080048650.01.T01:CDS
AACGGATTAGCAATTCCTCC+AGG 0.575704 contig389end:-24351 None:intergenic
AGATGTATTTGTTCTTGAGG+GGG 0.579956 contig389end:+21719 MsG0080048650.01.T01:CDS
TATTAAGTTTGAATACTCAT+GGG 0.580134 contig389end:-23231 None:intergenic
ACTCCAGTTGGATAAGGAGT+AGG 0.582137 contig389end:+21898 MsG0080048650.01.T01:CDS
TAATACGTATTTCTTCCTCT+GGG 0.582447 contig389end:-24037 None:intergenic
ATAACAGGTTAGTGAAGAAG+TGG 0.585362 contig389end:+21136 MsG0080048650.01.T01:intron
CTTATGTAGATTCTTGGGAG+CGG 0.585739 contig389end:+22357 MsG0080048650.01.T01:intron
GCCCACAACAGCTTTGCCCG+AGG 0.590642 contig389end:-24231 None:intergenic
CTGCAAGTTATATTAAAGGA+TGG 0.591505 contig389end:+21840 MsG0080048650.01.T01:CDS
GCGGCATGTCAAATAAGATG+TGG 0.597175 contig389end:+22376 MsG0080048650.01.T01:CDS
CTTACATTACGCAATCTCTG+AGG 0.597794 contig389end:-22245 None:intergenic
AGCTGAGTGATACTGGTCGT+TGG 0.598925 contig389end:-22523 None:intergenic
AGTTGTGCAGAGAGACCTGC+CGG 0.599061 contig389end:+24549 MsG0080048650.01.T01:three_prime_UTR
TAGATGTATTTGTTCTTGAG+GGG 0.601798 contig389end:+21718 MsG0080048650.01.T01:CDS
CAAGGTATTAGCAGAATGCA+CGG 0.602936 contig389end:+20116 MsG0080048650.01.T01:exon
CTTAAGGCAGCTTTGAGATG+GGG 0.606673 contig389end:+24263 MsG0080048650.01.T01:CDS
ATTTCAAATTCTACTTACAG+AGG 0.608028 contig389end:+23999 MsG0080048650.01.T01:CDS
CCCACCGGCCTTGCATGATG+AGG 0.608643 contig389end:+22118 MsG0080048650.01.T01:CDS
CGGCATGTCAAATAAGATGT+GGG 0.610029 contig389end:+22377 MsG0080048650.01.T01:CDS
CCTCATCATGCAAGGCCGGT+GGG 0.611404 contig389end:-22118 None:intergenic
GAAAGTAGAAGGTGAGCAAG+GGG 0.613508 contig389end:+21620 MsG0080048650.01.T01:CDS
TGCAGATCGCCAGACAGAAG+AGG 0.616462 contig389end:-21822 None:intergenic
TGCACGTTATTGAGTATGAT+GGG 0.623578 contig389end:+23141 MsG0080048650.01.T01:CDS
TTGCTCCGTATGTTTAACAT+GGG 0.630977 contig389end:+24098 MsG0080048650.01.T01:CDS
TCTCCAAACCTCATCATGCA+AGG 0.631609 contig389end:-22126 None:intergenic
TGGGAACCCATGAGAGCCTG+AGG 0.631909 contig389end:-23212 None:intergenic
TAATCCGTTATGATCTGTAA+CGG 0.631979 contig389end:+24365 MsG0080048650.01.T01:three_prime_UTR
GATTGTTGAAGCCTTGAAGG+TGG 0.639647 contig389end:+20358 MsG0080048650.01.T01:CDS
CGTAGCACGACTTTGAGCAA+GGG 0.641978 contig389end:+24456 MsG0080048650.01.T01:three_prime_UTR
AAGTCTTCGCATGCTCAACA+AGG 0.645387 contig389end:-22404 None:intergenic
GTATTAGCAGAATGCACGGA+AGG 0.647545 contig389end:+20120 MsG0080048650.01.T01:exon
AATTGAAAGAAGCATGTGCA+TGG 0.648736 contig389end:-24124 None:intergenic
ACTTTATGTATATTATCCCG+AGG 0.649519 contig389end:+22443 MsG0080048650.01.T01:CDS
CATATTGTGAAAGAACGTGA+AGG 0.655058 contig389end:+21792 MsG0080048650.01.T01:CDS
CGAGGATGCAAGAAATGTGG+GGG 0.655440 contig389end:+22461 MsG0080048650.01.T01:CDS
TGATCATCATGTAGCTAGGG+CGG 0.657688 contig389end:+20148 MsG0080048650.01.T01:CDS
ATGCCACAAACAGTAACACA+CGG 0.658400 contig389end:+23960 MsG0080048650.01.T01:CDS
CCGAGGATGCAAGAAATGTG+GGG 0.658464 contig389end:+22460 MsG0080048650.01.T01:CDS
ATTAGGGTACCCATCTTCGT+GGG 0.661719 contig389end:-24147 None:intergenic
ATTGTAAATTATTGTCATCG+GGG 0.664217 contig389end:-21554 None:intergenic
GCGAAGACTTGTGTTCTCAG+TGG 0.675741 contig389end:+22417 MsG0080048650.01.T01:CDS
ATACAAGAAACACTACCCAC+CGG 0.676079 contig389end:+22103 MsG0080048650.01.T01:CDS
TTCACTGTTAAGGATCATCG+TGG 0.682664 contig389end:+21996 MsG0080048650.01.T01:CDS
GTCCCACCAAGCTTAATGGG+AGG 0.683314 contig389end:+21180 MsG0080048650.01.T01:CDS
AGTTGAAGACTTCTTCCCAG+AGG 0.686584 contig389end:+24022 MsG0080048650.01.T01:CDS
AACATAAATATCATGCCACA+CGG 0.695590 contig389end:-24850 None:intergenic
TGCCACAAACAGTAACACAC+GGG 0.702886 contig389end:+23961 MsG0080048650.01.T01:CDS
GGATGGTGTAGGAACACTGG+GGG 0.712741 contig389end:+21857 MsG0080048650.01.T01:CDS
TCTCTTGTACAGCTGCCGTG+TGG 0.715104 contig389end:+24835 MsG0080048650.01.T01:three_prime_UTR
GGAGTAGGAAGTTCAGATTG+GGG 0.725755 contig389end:+21913 MsG0080048650.01.T01:CDS
TAGATGACTCTTGATCCTGG+AGG 0.730918 contig389end:+24336 MsG0080048650.01.T01:exon
GCAGGTTTATGTGGACACGT+TGG 0.737780 contig389end:+23094 MsG0080048650.01.T01:intron
AGGATGGTGTAGGAACACTG+GGG 0.798727 contig389end:+21856 MsG0080048650.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATAATTAATGTTATTTC+TGG + contig389end:22882-22901 MsG0080048650.01.T01:intron 10.0%
!!! TTTATATTTAGGTTTTAATT+TGG + contig389end:22593-22612 MsG0080048650.01.T01:intron 10.0%
!! CTAAAAGATATAAACATAAT+TGG + contig389end:22733-22752 MsG0080048650.01.T01:intron 15.0%
!! TAAACAAAAATAGAATAAAC+AGG - contig389end:20486-20505 None:intergenic 15.0%
!!! AAACAATAAAAGTGATATTT+TGG - contig389end:20553-20572 None:intergenic 15.0%
!!! AAGTAGCTTTTTTAATAAAA+TGG - contig389end:20607-20626 None:intergenic 15.0%
!!! GCTTAGAAAATTTTATATTT+AGG + contig389end:22582-22601 MsG0080048650.01.T01:intron 15.0%
!!! TAATACAAAAATGTTTTACA+AGG - contig389end:23346-23365 None:intergenic 15.0%
!!! TTTTTATGATAGTAAACAAA+TGG + contig389end:20724-20743 MsG0080048650.01.T01:intron 15.0%
!!! TTTTTGTTTAATTCATTTGT+TGG + contig389end:20496-20515 MsG0080048650.01.T01:intron 15.0%
!! AAACAAACAAAGTTGTTAAT+AGG - contig389end:20255-20274 None:intergenic 20.0%
!! AACCTATTCCAAATAAAAAA+TGG + contig389end:21343-21362 MsG0080048650.01.T01:intron 20.0%
!! AATTGTAAATTATTGTCATC+GGG - contig389end:21558-21577 None:intergenic 20.0%
!! ACCTATTCCAAATAAAAAAT+GGG + contig389end:21344-21363 MsG0080048650.01.T01:intron 20.0%
!! AGACTTAGATATAATTGAAT+AGG + contig389end:20913-20932 MsG0080048650.01.T01:intron 20.0%
!! CAATTGTAAATTATTGTCAT+CGG - contig389end:21559-21578 None:intergenic 20.0%
!! TATTAACAACAAAAGTAGAA+GGG + contig389end:23361-23380 MsG0080048650.01.T01:intron 20.0%
!! TATTAAGTTTGAATACTCAT+GGG - contig389end:23234-23253 None:intergenic 20.0%
!! TGTATAATTAAACATGCTAA+GGG - contig389end:21219-21238 None:intergenic 20.0%
!! TTACAATCAGGATAAAAATT+TGG + contig389end:23178-23197 MsG0080048650.01.T01:CDS 20.0%
!! TTAGCATGTTTAATTATACA+GGG + contig389end:21219-21238 MsG0080048650.01.T01:intron 20.0%
!! TTGGCTAAAAAAAATAGAAA+CGG - contig389end:20534-20553 None:intergenic 20.0%
!! TTTATGTTCTCAATTTGAAT+TGG + contig389end:24865-24884 MsG0080048650.01.T01:three_prime_UTR 20.0%
!!! AATCTATTTTATTTGGTGAT+TGG + contig389end:21416-21435 MsG0080048650.01.T01:intron 20.0%
!!! ACTTCGAATAAAACTTTTAT+TGG - contig389end:23477-23496 None:intergenic 20.0%
!!! AGAAATAACTTTTCATTTTG+AGG - contig389end:20634-20653 None:intergenic 20.0%
!!! AGTTTTAATGACAAGAAAAT+TGG - contig389end:23537-23556 None:intergenic 20.0%
!!! AGTTTTTATAATTTTGTCTG+AGG + contig389end:20086-20105 MsG0080048650.01.T01:five_prime_UTR 20.0%
!!! ATTAACAACTTTGTTTGTTT+GGG + contig389end:20255-20274 MsG0080048650.01.T01:intron 20.0%
!!! GATATTTCCCATTTTTTATT+TGG - contig389end:21354-21373 None:intergenic 20.0%
!!! GTTTTAATGACAAGAAAATT+GGG - contig389end:23536-23555 None:intergenic 20.0%
!!! TATTAACAACTTTGTTTGTT+TGG + contig389end:20254-20273 MsG0080048650.01.T01:intron 20.0%
!!! TTAACGTGTAAAAGTTTTAA+AGG + contig389end:24631-24650 MsG0080048650.01.T01:three_prime_UTR 20.0%
!!! TTTTAATGACAAGAAAATTG+GGG - contig389end:23535-23554 None:intergenic 20.0%
!!! TTTTTTCTAAATAAAGCCAA+TGG + contig389end:23063-23082 MsG0080048650.01.T01:intron 20.0%
! AAAATGCGTTATCATCAAAT+TGG - contig389end:23866-23885 None:intergenic 25.0%
! AACTTCAAAGAAGTGAAAAT+GGG + contig389end:23925-23944 MsG0080048650.01.T01:CDS 25.0%
! AAGAACAAATACATCTAGTT+TGG - contig389end:21715-21734 None:intergenic 25.0%
! AATATGTGCATAGATAAGAT+AGG + contig389end:22907-22926 MsG0080048650.01.T01:intron 25.0%
! AATCACATTTATGAATTGAG+CGG + contig389end:22492-22511 MsG0080048650.01.T01:CDS 25.0%
! ATCAACCAAAACAATATGTA+TGG - contig389end:21649-21668 None:intergenic 25.0%
! ATCTAAATTCTTGCTCATTT+AGG + contig389end:22269-22288 MsG0080048650.01.T01:intron 25.0%
! ATCTTTCTTATGTAGATTCT+TGG + contig389end:22351-22370 MsG0080048650.01.T01:intron 25.0%
! ATTGTAAATTATTGTCATCG+GGG - contig389end:21557-21576 None:intergenic 25.0%
! ATTTCAAATTCTACTTACAG+AGG + contig389end:23999-24018 MsG0080048650.01.T01:CDS 25.0%
! CATTCAAACAAAAAATGCTA+AGG + contig389end:20951-20970 MsG0080048650.01.T01:intron 25.0%
! CTGTATAATTAAACATGCTA+AGG - contig389end:21220-21239 None:intergenic 25.0%
! CTTAGCATGTTTAATTATAC+AGG + contig389end:21218-21237 MsG0080048650.01.T01:intron 25.0%
! GTATTAACAACAAAAGTAGA+AGG + contig389end:23360-23379 MsG0080048650.01.T01:intron 25.0%
! GTATTAAGTTTGAATACTCA+TGG - contig389end:23235-23254 None:intergenic 25.0%
! GTCATTAAAACTACTAAAGT+TGG + contig389end:23545-23564 MsG0080048650.01.T01:intron 25.0%
! TAAGAAAATTCACTTCATTG+TGG + contig389end:20432-20451 MsG0080048650.01.T01:intron 25.0%
! TAATACCCTAATTCAAATTC+AGG + contig389end:21508-21527 MsG0080048650.01.T01:intron 25.0%
! TAGCATGTTTAATTATACAG+GGG + contig389end:21220-21239 MsG0080048650.01.T01:intron 25.0%
! TCTTTCTTATGTAGATTCTT+GGG + contig389end:22352-22371 MsG0080048650.01.T01:intron 25.0%
! TTAAGTGAATCTATGTTACT+TGG + contig389end:21062-21081 MsG0080048650.01.T01:intron 25.0%
! TTGTATACTATATAGTCCAA+AGG - contig389end:22089-22108 None:intergenic 25.0%
!! AAACTTTTACACGTTAATGA+TGG - contig389end:24628-24647 None:intergenic 25.0%
!! AACTTTTACACGTTAATGAT+GGG - contig389end:24627-24646 None:intergenic 25.0%
!! AATTTTATTGTCTTTTAGCC+TGG + contig389end:20867-20886 MsG0080048650.01.T01:intron 25.0%
!! ACACTGCAATCTATTTTATT+TGG + contig389end:21409-21428 MsG0080048650.01.T01:intron 25.0%
!! GTTAGGAGTGTAAATATAAT+AGG - contig389end:22850-22869 None:intergenic 25.0%
!! TAATATGTGCTACTAAGAAA+TGG + contig389end:22967-22986 MsG0080048650.01.T01:intron 25.0%
!! TGAAGAAAGCATATGATAAT+TGG + contig389end:23117-23136 MsG0080048650.01.T01:CDS 25.0%
!!! AAATCTTAACTACTTTTGCT+AGG + contig389end:24742-24761 MsG0080048650.01.T01:three_prime_UTR 25.0%
!!! AGTTTTTCGCCTTTTAAAAA+TGG + contig389end:23726-23745 MsG0080048650.01.T01:intron 25.0%
!!! ATCATCTTTTTATTTCACTG+TGG - contig389end:23042-23061 None:intergenic 25.0%
!!! ATTCATTTGTTGGAAAGTTT+TGG + contig389end:20506-20525 MsG0080048650.01.T01:intron 25.0%
!!! ATTTTGCCTAGTTTTATTCT+TGG + contig389end:22800-22819 MsG0080048650.01.T01:intron 25.0%
!!! TCCCATTTTTTATTTGGAAT+AGG - contig389end:21348-21367 None:intergenic 25.0%
!!! TGTTTTAACGAAATTTCCTT+TGG + contig389end:22070-22089 MsG0080048650.01.T01:intron 25.0%
!!! TTCATTTGTTGGAAAGTTTT+GGG + contig389end:20507-20526 MsG0080048650.01.T01:intron 25.0%
!!! TTTATTTAGCCTTTTGTGAA+AGG - contig389end:22177-22196 None:intergenic 25.0%
AAAATGCTAAGGTTTATGAG+AGG + contig389end:20962-20981 MsG0080048650.01.T01:intron 30.0%
AAACTACTAAAGTTGGCAAA+TGG + contig389end:23552-23571 MsG0080048650.01.T01:intron 30.0%
AACATAAATATCATGCCACA+CGG - contig389end:24853-24872 None:intergenic 30.0%
AAGAAATGGTAGGTAATCAA+TGG + contig389end:22981-23000 MsG0080048650.01.T01:intron 30.0%
AAGTTCGATTTCACTAAAAG+TGG + contig389end:23493-23512 MsG0080048650.01.T01:intron 30.0%
ACTAGATGTATTTGTTCTTG+AGG + contig389end:21716-21735 MsG0080048650.01.T01:CDS 30.0%
ACTTTATGTATATTATCCCG+AGG + contig389end:22443-22462 MsG0080048650.01.T01:CDS 30.0%
AGAAGACCTGAATTTGAATT+AGG - contig389end:21517-21536 None:intergenic 30.0%
ATAACCCAACTTTCATCATA+TGG - contig389end:22668-22687 None:intergenic 30.0%
ATAATGAGGACGATGAAAAT+TGG + contig389end:21748-21767 MsG0080048650.01.T01:CDS 30.0%
ATACCTTAAGGCTTAAAGTA+AGG - contig389end:20828-20847 None:intergenic 30.0%
ATTACCGTTACAGATCATAA+CGG - contig389end:24372-24391 None:intergenic 30.0%
ATTAGTATTCTGTGATTGCA+TGG - contig389end:23829-23848 None:intergenic 30.0%
CAACTTCAAAGAAGTGAAAA+TGG + contig389end:23924-23943 MsG0080048650.01.T01:CDS 30.0%
CGATCTGCAAGTTATATTAA+AGG + contig389end:21836-21855 MsG0080048650.01.T01:CDS 30.0%
CTAGATGTATTTGTTCTTGA+GGG + contig389end:21717-21736 MsG0080048650.01.T01:CDS 30.0%
CTGCAAGTTATATTAAAGGA+TGG + contig389end:21840-21859 MsG0080048650.01.T01:CDS 30.0%
GAAGACCTGAATTTGAATTA+GGG - contig389end:21516-21535 None:intergenic 30.0%
GCACAACTGATTAAGAATTA+TGG - contig389end:24537-24556 None:intergenic 30.0%
GCTTACTTGGCAAAAAATTT+GGG + contig389end:21281-21300 MsG0080048650.01.T01:intron 30.0%
GTCTCTACTAAATTACAATC+AGG + contig389end:23166-23185 MsG0080048650.01.T01:CDS 30.0%
GTTATATTAAAGGATGGTGT+AGG + contig389end:21846-21865 MsG0080048650.01.T01:CDS 30.0%
TAAAGTTGGCAAATGGTATT+TGG + contig389end:23559-23578 MsG0080048650.01.T01:intron 30.0%
TAATCCGTTATGATCTGTAA+CGG + contig389end:24365-24384 MsG0080048650.01.T01:three_prime_UTR 30.0%
TACCTTAAGGCTTAAAGTAA+GGG - contig389end:20827-20846 None:intergenic 30.0%
TAGATGTATTTGTTCTTGAG+GGG + contig389end:21718-21737 MsG0080048650.01.T01:CDS 30.0%
TTCTGATGACATTTCATCAT+GGG - contig389end:23633-23652 None:intergenic 30.0%
! ATCTGTAACGGTAATTTTTC+TGG + contig389end:24377-24396 MsG0080048650.01.T01:three_prime_UTR 30.0%
! GTAAGTAGAATTTGAAATGC+TGG - contig389end:23997-24016 None:intergenic 30.0%
! TAATGTTGAGAAATTAGCCT+TGG - contig389end:24412-24431 None:intergenic 30.0%
!! TCATTTGTTGGAAAGTTTTG+GGG + contig389end:20508-20527 MsG0080048650.01.T01:intron 30.0%
!!! AACGGTAATTTTTCTGGTTA+GGG + contig389end:24383-24402 MsG0080048650.01.T01:three_prime_UTR 30.0%
!!! GCATTTTTTGTTTGAATGTG+TGG - contig389end:20949-20968 None:intergenic 30.0%
!!! GGTTTTAATTTGGACCATAT+TGG + contig389end:22603-22622 MsG0080048650.01.T01:intron 30.0%
!!! TAACGGTAATTTTTCTGGTT+AGG + contig389end:24382-24401 MsG0080048650.01.T01:three_prime_UTR 30.0%
AAACCTGCAATAGAAACCAT+TGG - contig389end:23082-23101 None:intergenic 35.0%
AACAGTGAAAGCTTCTGATT+TGG - contig389end:21985-22004 None:intergenic 35.0%
AATTAGATGACTCTTGATCC+TGG + contig389end:24333-24352 MsG0080048650.01.T01:exon 35.0%
ACTATGAGTGAAACAGTCTA+TGG - contig389end:23709-23728 None:intergenic 35.0%
ACTTGGCAAAAAATTTGGGT+TGG + contig389end:21285-21304 MsG0080048650.01.T01:intron 35.0%
AGATGTATTTGTTCTTGAGG+GGG + contig389end:21719-21738 MsG0080048650.01.T01:CDS 35.0%
ATAAAACCCTGTGCAAAGTT+AGG - contig389end:22867-22886 None:intergenic 35.0%
ATAACAGGTTAGTGAAGAAG+TGG + contig389end:21136-21155 MsG0080048650.01.T01:intron 35.0%
ATACAACAATGTTCAGTGCT+TGG + contig389end:22769-22788 MsG0080048650.01.T01:intron 35.0%
ATCAGAAGCTTTCACTGTTA+AGG + contig389end:21986-22005 MsG0080048650.01.T01:CDS 35.0%
ATGAAAGAAAGACGCCAATA+TGG - contig389end:22620-22639 None:intergenic 35.0%
ATGCACGTTATTGAGTATGA+TGG + contig389end:23140-23159 MsG0080048650.01.T01:CDS 35.0%
ATTATACCTCCCATTAAGCT+TGG - contig389end:21189-21208 None:intergenic 35.0%
CACAAAAGGCTAAATAAAGC+AGG + contig389end:22179-22198 MsG0080048650.01.T01:CDS 35.0%
CAGAGTCCAAGAATAAAACT+AGG - contig389end:22809-22828 None:intergenic 35.0%
CATATTGTGAAAGAACGTGA+AGG + contig389end:21792-21811 MsG0080048650.01.T01:CDS 35.0%
CATTCTGCTAATACCTTGTT+TGG - contig389end:20114-20133 None:intergenic 35.0%
CGTCAATTGCTTGATTGAAT+AGG + contig389end:24791-24810 MsG0080048650.01.T01:three_prime_UTR 35.0%
CTTCAAGCAAAAATTGCCTT+CGG - contig389end:24680-24699 None:intergenic 35.0%
CTTCTGATGACATTTCATCA+TGG - contig389end:23634-23653 None:intergenic 35.0%
GAGACCATATGATGAAAGTT+GGG + contig389end:22661-22680 MsG0080048650.01.T01:intron 35.0%
GGCTTACTTGGCAAAAAATT+TGG + contig389end:21280-21299 MsG0080048650.01.T01:intron 35.0%
GTTTCTATTGCAGGTTTATG+TGG + contig389end:23085-23104 MsG0080048650.01.T01:intron 35.0%
TGAAAGAACGTGAAGGAAAA+AGG + contig389end:21799-21818 MsG0080048650.01.T01:CDS 35.0%
TGAGACCATATGATGAAAGT+TGG + contig389end:22660-22679 MsG0080048650.01.T01:intron 35.0%
TGCACGTTATTGAGTATGAT+GGG + contig389end:23141-23160 MsG0080048650.01.T01:CDS 35.0%
TTACATTACGCAATCTCTGA+GGG - contig389end:22247-22266 None:intergenic 35.0%
TTGCTCCGTATGTTTAACAT+GGG + contig389end:24098-24117 MsG0080048650.01.T01:CDS 35.0%
TTTGCTCCGTATGTTTAACA+TGG + contig389end:24097-24116 MsG0080048650.01.T01:CDS 35.0%
! AAACAGTCTATGGATTGACA+TGG - contig389end:23699-23718 None:intergenic 35.0%
! AATTGAAAGAAGCATGTGCA+TGG - contig389end:24127-24146 None:intergenic 35.0%
! AGGCAATTTTTGCTTGAAGT+TGG + contig389end:24681-24700 MsG0080048650.01.T01:three_prime_UTR 35.0%
! ATGTGCTACTAAGAAATGGT+AGG + contig389end:22971-22990 MsG0080048650.01.T01:intron 35.0%
! ATTTTTGCTTGAAGTTGGCA+AGG + contig389end:24686-24705 MsG0080048650.01.T01:three_prime_UTR 35.0%
! TCCAGGGCTAATCTTAATTT+TGG + contig389end:21317-21336 MsG0080048650.01.T01:intron 35.0%
! TTATTGTCTTTTAGCCTGGT+AGG + contig389end:20871-20890 MsG0080048650.01.T01:intron 35.0%
!! AAGTAAGGGTGCATTTGTTT+TGG - contig389end:20813-20832 None:intergenic 35.0%
!! GAAACCTGGATTGGTTTATT+TGG + contig389end:24482-24501 MsG0080048650.01.T01:three_prime_UTR 35.0%
!! GGGTATTTTTGTTAGGAAGA+AGG + contig389end:24283-24302 MsG0080048650.01.T01:CDS 35.0%
!! GTGAGCTCACCATTTTTAAA+AGG - contig389end:23738-23757 None:intergenic 35.0%
!! TGAGATGGGGTATTTTTGTT+AGG + contig389end:24276-24295 MsG0080048650.01.T01:CDS 35.0%
!! TTTACACGTTAATGATGGGT+GGG - contig389end:24623-24642 None:intergenic 35.0%
!! TTTCTTGCTTGCTGTATAAC+AGG + contig389end:21121-21140 MsG0080048650.01.T01:intron 35.0%
!! TTTTACACGTTAATGATGGG+TGG - contig389end:24624-24643 None:intergenic 35.0%
AAATACAGGCCAACCTTCAA+TGG + contig389end:23289-23308 MsG0080048650.01.T01:CDS 40.0%
AAGCCAATGGTTTCTATTGC+AGG + contig389end:23076-23095 MsG0080048650.01.T01:intron 40.0%
AAGGAGTAGGAAGTTCAGAT+TGG + contig389end:21911-21930 MsG0080048650.01.T01:CDS 40.0%
AAGGTTTATGAGAGGCTTTC+TGG + contig389end:20970-20989 MsG0080048650.01.T01:intron 40.0%
AATGACAAGAAAATTGGGGC+AGG - contig389end:23531-23550 None:intergenic 40.0%
ACGTTGATCATCATGTAGCT+AGG + contig389end:20144-20163 MsG0080048650.01.T01:CDS 40.0%
AGCACCAAATAAACCAATCC+AGG - contig389end:24489-24508 None:intergenic 40.0%
AGGAGTAGGAAGTTCAGATT+GGG + contig389end:21912-21931 MsG0080048650.01.T01:CDS 40.0%
AGGATGGTTCCTTTCACAAA+AGG + contig389end:22165-22184 MsG0080048650.01.T01:CDS 40.0%
AGTGAAAATGGGATGATGCT+TGG + contig389end:23936-23955 MsG0080048650.01.T01:CDS 40.0%
ATACAAGAAACACTACCCAC+CGG + contig389end:22103-22122 MsG0080048650.01.T01:CDS 40.0%
ATCATATGGTCTCAGAAGTC+AGG - contig389end:22654-22673 None:intergenic 40.0%
ATGACAAGAAAATTGGGGCA+GGG - contig389end:23530-23549 None:intergenic 40.0%
ATGCCACAAACAGTAACACA+CGG + contig389end:23960-23979 MsG0080048650.01.T01:CDS 40.0%
ATGTCTGCAGGTTATCATGA+TGG + contig389end:23786-23805 MsG0080048650.01.T01:intron 40.0%
CAAAATGAGTCAGGGTAGAT+TGG + contig389end:21246-21265 MsG0080048650.01.T01:intron 40.0%
CACCCTTACTTTAAGCCTTA+AGG + contig389end:20822-20841 MsG0080048650.01.T01:intron 40.0%
CAGATGCAAGTGATACCTTA+AGG - contig389end:20840-20859 None:intergenic 40.0%
CATTCCATCACAAAAACCTG+AGG - contig389end:21949-21968 None:intergenic 40.0%
CATTTACTGACAACTCCAGT+TGG + contig389end:21886-21905 MsG0080048650.01.T01:CDS 40.0%
CGGCATGTCAAATAAGATGT+GGG + contig389end:22377-22396 MsG0080048650.01.T01:CDS 40.0%
CGTTAGTCAACGTGTGAATT+TGG + contig389end:21375-21394 MsG0080048650.01.T01:intron 40.0%
CGTTGATCATCATGTAGCTA+GGG + contig389end:20145-20164 MsG0080048650.01.T01:CDS 40.0%
CTGATTACGTATATGTCTGC+AGG + contig389end:23774-23793 MsG0080048650.01.T01:intron 40.0%
CTTACAACTCTGCGTAGAAT+AGG - contig389end:20416-20435 None:intergenic 40.0%
CTTACATTACGCAATCTCTG+AGG - contig389end:22248-22267 None:intergenic 40.0%
CTTATGTAGATTCTTGGGAG+CGG + contig389end:22357-22376 MsG0080048650.01.T01:intron 40.0%
CTTTCAATTCCCACGAAGAT+GGG + contig389end:24138-24157 MsG0080048650.01.T01:CDS 40.0%
GAATTGGTGTGATGACTACT+TGG + contig389end:24881-24900 MsG0080048650.01.T01:three_prime_UTR 40.0%
GAGTGTATTGAACAAAGCGA+GGG - contig389end:23450-23469 None:intergenic 40.0%
GGCTTCCCATGTTAAACATA+CGG - contig389end:24106-24125 None:intergenic 40.0%
GGGTTGGAATTAAAAGTCCA+GGG + contig389end:21301-21320 MsG0080048650.01.T01:intron 40.0%
GGTCTCTGATAACAAGTCTT+AGG - contig389end:22226-22245 None:intergenic 40.0%
TACACTCCTAACTTTGCACA+GGG + contig389end:22858-22877 MsG0080048650.01.T01:intron 40.0%
TACTTTCCCGCCAGTAAAAA+GGG - contig389end:21607-21626 None:intergenic 40.0%
TATTCTTGGACTCTGTCTTG+TGG + contig389end:22814-22833 MsG0080048650.01.T01:intron 40.0%
TCTTTCAATTCCCACGAAGA+TGG + contig389end:24137-24156 MsG0080048650.01.T01:CDS 40.0%
TGAGGGGGATTTCAATAATG+AGG + contig389end:21734-21753 MsG0080048650.01.T01:CDS 40.0%
TGAGTGTATTGAACAAAGCG+AGG - contig389end:23451-23470 None:intergenic 40.0%
TGTGATTGTTGAAGCCTTGA+AGG + contig389end:20355-20374 MsG0080048650.01.T01:CDS 40.0%
TGTTGTGTTGTGTGTGTAGT+AGG - contig389end:20058-20077 None:intergenic 40.0%
TTACACTCCTAACTTTGCAC+AGG + contig389end:22857-22876 MsG0080048650.01.T01:intron 40.0%
TTACTGGATGTGGCAAACTA+TGG - contig389end:23271-23290 None:intergenic 40.0%
TTCACTGTTAAGGATCATCG+TGG + contig389end:21996-22015 MsG0080048650.01.T01:CDS 40.0%
TTCCTGAGATTTCACGCTTT+AGG - contig389end:24713-24732 None:intergenic 40.0%
TTGATTAACCTAGCCAAAGC+AGG - contig389end:20230-20249 None:intergenic 40.0%
TTGCCACATCCAGTAAATAC+AGG + contig389end:23275-23294 MsG0080048650.01.T01:CDS 40.0%
TTGTGGTTACAAGCACTTCA+TGG + contig389end:22702-22721 MsG0080048650.01.T01:intron 40.0%
TTTGTCTGAGGAACCAAACA+AGG + contig389end:20098-20117 MsG0080048650.01.T01:five_prime_UTR 40.0%
! AATTTGAAATGCTGGCAGTC+TGG - contig389end:23989-24008 None:intergenic 40.0%
! CAAGGTATTAGCAGAATGCA+CGG + contig389end:20116-20135 MsG0080048650.01.T01:exon 40.0%
! GAAGGGTTCTTCAGTTGTTT+TGG + contig389end:23378-23397 MsG0080048650.01.T01:intron 40.0%
! GCAAATGGTATTTGGAACAC+TGG + contig389end:23567-23586 MsG0080048650.01.T01:intron 40.0%
! GCCAAAATTAAGATTAGCCC+TGG - contig389end:21321-21340 None:intergenic 40.0%
! GCTTGAAAGATCGCATGTTT+TGG + contig389end:24653-24672 MsG0080048650.01.T01:three_prime_UTR 40.0%
! GGCAGCCATACATATTGTTT+TGG + contig389end:21641-21660 MsG0080048650.01.T01:CDS 40.0%
! GTTTCCTCAGGTTTTTGTGA+TGG + contig389end:21942-21961 MsG0080048650.01.T01:CDS 40.0%
! TGGGTTGGAATTAAAAGTCC+AGG + contig389end:21300-21319 MsG0080048650.01.T01:intron 40.0%
! TTCTCTCTCTGAGAGTCAAA+AGG + contig389end:22548-22567 MsG0080048650.01.T01:CDS 40.0%
! TTGTAGCTCATGTTGTTTGC+AGG - contig389end:24188-24207 None:intergenic 40.0%
!! ACTCTGAGATACAGACTTTC+AGG - contig389end:21006-21025 None:intergenic 40.0%
!! CACTTCTTTGAAGTTGAGCT+TGG - contig389end:23920-23939 None:intergenic 40.0%
!! GCATGTATGCAGATGGATTA+GGG - contig389end:24166-24185 None:intergenic 40.0%
!! GGTAGATTGGTTTGTCTTGT+CGG + contig389end:21259-21278 MsG0080048650.01.T01:intron 40.0%
!! TCTTTGAAGTTGAGCTTGGT+GGG - contig389end:23916-23935 None:intergenic 40.0%
!! TTCTTTGAAGTTGAGCTTGG+TGG - contig389end:23917-23936 None:intergenic 40.0%
!!! GTTTTGGTTGATGCAAACAC+AGG + contig389end:21657-21676 MsG0080048650.01.T01:CDS 40.0%
AAAAAGGGGAAGGGATAGTC+TGG - contig389end:21592-21611 None:intergenic 45.0%
AAAGGATGGTGTAGGAACAC+TGG + contig389end:21854-21873 MsG0080048650.01.T01:CDS 45.0%
AACATCTCACCTCCTAAGTG+AGG - contig389end:22314-22333 None:intergenic 45.0%
AAGGATGGTGTAGGAACACT+GGG + contig389end:21855-21874 MsG0080048650.01.T01:CDS 45.0%
AAGTCTTCGCATGCTCAACA+AGG - contig389end:22407-22426 None:intergenic 45.0%
ACATCTCACCTCCTAAGTGA+GGG - contig389end:22313-22332 None:intergenic 45.0%
ACTCCAGTTGGATAAGGAGT+AGG + contig389end:21898-21917 MsG0080048650.01.T01:CDS 45.0%
ACTTTCCCGCCAGTAAAAAG+GGG - contig389end:21606-21625 None:intergenic 45.0%
ATACCTCCCATTAAGCTTGG+TGG - contig389end:21186-21205 None:intergenic 45.0%
ATGGATACAGGAGCAACAGT+TGG + contig389end:23308-23327 MsG0080048650.01.T01:CDS 45.0%
CTACTTTCCCGCCAGTAAAA+AGG - contig389end:21608-21627 None:intergenic 45.0%
CTAGTTTGGCACATGACTCT+GGG - contig389end:21701-21720 None:intergenic 45.0%
CTCCTGTATCCATTGAAGGT+TGG - contig389end:23301-23320 None:intergenic 45.0%
CTGACAACTCCAGTTGGATA+AGG + contig389end:21892-21911 MsG0080048650.01.T01:CDS 45.0%
CTGCATACTATCCACCTTCA+AGG - contig389end:20372-20391 None:intergenic 45.0%
CTGGAGAAGATTGGTAAGGA+TGG + contig389end:22149-22168 MsG0080048650.01.T01:CDS 45.0%
CTTCCTACTCCTTATCCAAC+TGG - contig389end:21904-21923 None:intergenic 45.0%
GAAAGTAGAAGGTGAGCAAG+GGG + contig389end:21620-21639 MsG0080048650.01.T01:CDS 45.0%
GAAGAGAATAACAGTGCCAC+CGG + contig389end:23650-23669 MsG0080048650.01.T01:intron 45.0%
GAGAATCAGCTGAGTGATAC+TGG - contig389end:22533-22552 None:intergenic 45.0%
GAGACTGGAGAAGATTGGTA+AGG + contig389end:22145-22164 MsG0080048650.01.T01:CDS 45.0%
GATTCCACTTCTGCTGAAGA+TGG + contig389end:20185-20204 MsG0080048650.01.T01:CDS 45.0%
GATTGACATGGATTTCGAGC+AGG - contig389end:23687-23706 None:intergenic 45.0%
GATTGTTGAAGCCTTGAAGG+TGG + contig389end:20358-20377 MsG0080048650.01.T01:CDS 45.0%
GCGGCATGTCAAATAAGATG+TGG + contig389end:22376-22395 MsG0080048650.01.T01:CDS 45.0%
GCTACGAAGTTTGAGCAAGA+TGG - contig389end:24442-24461 None:intergenic 45.0%
GGAAAGTAGAAGGTGAGCAA+GGG + contig389end:21619-21638 MsG0080048650.01.T01:CDS 45.0%
GGAGTAGGAAGTTCAGATTG+GGG + contig389end:21913-21932 MsG0080048650.01.T01:CDS 45.0%
GTAACCACAACCAGATCTCA+GGG - contig389end:22692-22711 None:intergenic 45.0%
GTATTAGCAGAATGCACGGA+AGG + contig389end:20120-20139 MsG0080048650.01.T01:exon 45.0%
GTCCTAAAGCGTGAAATCTC+AGG + contig389end:24708-24727 MsG0080048650.01.T01:three_prime_UTR 45.0%
GTTGCTCCTGTATCCATTGA+AGG - contig389end:23305-23324 None:intergenic 45.0%
GTTTGGAGACTGGAGAAGAT+TGG + contig389end:22140-22159 MsG0080048650.01.T01:CDS 45.0%
TACCTCCCATTAAGCTTGGT+GGG - contig389end:21185-21204 None:intergenic 45.0%
TAGATGACTCTTGATCCTGG+AGG + contig389end:24336-24355 MsG0080048650.01.T01:exon 45.0%
TAGGTCCCACCAAGCTTAAT+GGG + contig389end:21177-21196 MsG0080048650.01.T01:CDS 45.0%
TCTCCAAACCTCATCATGCA+AGG - contig389end:22129-22148 None:intergenic 45.0%
TCTTCTCCAAAGCGCATAGA+AGG + contig389end:21531-21550 MsG0080048650.01.T01:CDS 45.0%
TGAACAAAGCGAGGGAAAAG+TGG - contig389end:23442-23461 None:intergenic 45.0%
TGACAAGAAAATTGGGGCAG+GGG - contig389end:23529-23548 None:intergenic 45.0%
TGATCATCATGTAGCTAGGG+CGG + contig389end:20148-20167 MsG0080048650.01.T01:CDS 45.0%
TGCCACAAACAGTAACACAC+GGG + contig389end:23961-23980 MsG0080048650.01.T01:CDS 45.0%
TGGCCTGTATTTACTGGATG+TGG - contig389end:23281-23300 None:intergenic 45.0%
TGTAACCACAACCAGATCTC+AGG - contig389end:22693-22712 None:intergenic 45.0%
TTTACTGGCGGGAAAGTAGA+AGG + contig389end:21609-21628 MsG0080048650.01.T01:CDS 45.0%
TTTGCAGGCATGTATGCAGA+TGG - contig389end:24173-24192 None:intergenic 45.0%
! AACCCGTGTGTTACTGTTTG+TGG - contig389end:23966-23985 None:intergenic 45.0%
! ATTAGGGTACCCATCTTCGT+GGG - contig389end:24150-24169 None:intergenic 45.0%
! CTATCCCTTCCCCTTTTTAC+TGG + contig389end:21594-21613 MsG0080048650.01.T01:CDS 45.0%
! GGCATGTATGCAGATGGATT+AGG - contig389end:24167-24186 None:intergenic 45.0%
! TCTAGTTTGGCACATGACTC+TGG - contig389end:21702-21721 None:intergenic 45.0%
! TCTTTTAGCCTGGTAGGTCT+TGG + contig389end:20877-20896 MsG0080048650.01.T01:intron 45.0%
!! AACGGATTAGCAATTCCTCC+AGG - contig389end:24354-24373 None:intergenic 45.0%
!! AGCTTAAGGCAGCTTTGAGA+TGG + contig389end:24261-24280 MsG0080048650.01.T01:CDS 45.0%
!! AGGGGTGTCAAAATGAGTCA+GGG + contig389end:21238-21257 MsG0080048650.01.T01:intron 45.0%
!! CTTAAGGCAGCTTTGAGATG+GGG + contig389end:24263-24282 MsG0080048650.01.T01:CDS 45.0%
!! CTTTGAAGTTGAGCTTGGTG+GGG - contig389end:23915-23934 None:intergenic 45.0%
!! GAAGGTTGGCCTGTATTTAC+TGG - contig389end:23287-23306 None:intergenic 45.0%
!! GCTTAAGGCAGCTTTGAGAT+GGG + contig389end:24262-24281 MsG0080048650.01.T01:CDS 45.0%
!! GTTTGTCTTGTCGGCTTACT+TGG + contig389end:21268-21287 MsG0080048650.01.T01:intron 45.0%
!!! TTTTCTGGTTAGGGCATCCA+AGG + contig389end:24392-24411 MsG0080048650.01.T01:three_prime_UTR 45.0%
AAAGCAGGTCGTTTCCGATC+AGG - contig389end:20215-20234 None:intergenic 50.0%
ACAGGCCATATTGTCACGTC+AGG + contig389end:21675-21694 MsG0080048650.01.T01:CDS 50.0%
AGCTGAGTGATACTGGTCGT+TGG - contig389end:22526-22545 None:intergenic 50.0%
AGGATGGTGTAGGAACACTG+GGG + contig389end:21856-21875 MsG0080048650.01.T01:CDS 50.0%
CAAACCTCATCATGCAAGGC+CGG - contig389end:22125-22144 None:intergenic 50.0%
CCCACATTTCTTGCATCCTC+GGG - contig389end:22462-22481 None:intergenic 50.0%
CCCCACATTTCTTGCATCCT+CGG - contig389end:22463-22482 None:intergenic 50.0%
CCCGAGGATGCAAGAAATGT+GGG + contig389end:22459-22478 MsG0080048650.01.T01:CDS 50.0%
CCGAGGATGCAAGAAATGTG+GGG + contig389end:22460-22479 MsG0080048650.01.T01:CDS 50.0%
CGAGCAGGTCACTATTTGTC+CGG - contig389end:23672-23691 None:intergenic 50.0%
CGAGGATGCAAGAAATGTGG+GGG + contig389end:22461-22480 MsG0080048650.01.T01:CDS 50.0%
CGATGAGCCAAAAAGCTCCT+CGG + contig389end:24214-24233 MsG0080048650.01.T01:CDS 50.0%
CGTAGCACGACTTTGAGCAA+GGG + contig389end:24456-24475 MsG0080048650.01.T01:three_prime_UTR 50.0%
CTAGGTCCCACCAAGCTTAA+TGG + contig389end:21176-21195 MsG0080048650.01.T01:CDS 50.0%
CTGAAGATGGTCAGCCTGAT+CGG + contig389end:20198-20217 MsG0080048650.01.T01:CDS 50.0%
CTGACCATCTTCAGCAGAAG+TGG - contig389end:20192-20211 None:intergenic 50.0%
CTGTGATTGCATGGAGAAGC+TGG - contig389end:23820-23839 None:intergenic 50.0%
GAGCGTGCTTTGGCAAAACT+AGG + contig389end:21158-21177 MsG0080048650.01.T01:CDS 50.0%
GATACAGGAGCAACAGTTGG+AGG + contig389end:23311-23330 MsG0080048650.01.T01:CDS 50.0%
GATGAGCCAAAAAGCTCCTC+GGG + contig389end:24215-24234 MsG0080048650.01.T01:CDS 50.0%
GCAGATCCATATTCCTGCAC+CGG - contig389end:24571-24590 None:intergenic 50.0%
GCAGGTTTATGTGGACACGT+TGG + contig389end:23094-23113 MsG0080048650.01.T01:intron 50.0%
GCATGATGAGGTTTGGAGAC+TGG + contig389end:22130-22149 MsG0080048650.01.T01:CDS 50.0%
GCGAAGACTTGTGTTCTCAG+TGG + contig389end:22417-22436 MsG0080048650.01.T01:CDS 50.0%
GGAAAAAGGCCTCTTCTGTC+TGG + contig389end:21813-21832 MsG0080048650.01.T01:CDS 50.0%
GGCCAACCTTCAATGGATAC+AGG + contig389end:23296-23315 MsG0080048650.01.T01:CDS 50.0%
GGGAAAGTAGAAGGTGAGCA+AGG + contig389end:21618-21637 MsG0080048650.01.T01:CDS 50.0%
TAGGGCGGAGAAGAGAAGTT+TGG + contig389end:20163-20182 MsG0080048650.01.T01:CDS 50.0%
TATGCCCTGAGATCTGGTTG+TGG + contig389end:22685-22704 MsG0080048650.01.T01:intron 50.0%
TCCCGAGGATGCAAGAAATG+TGG + contig389end:22458-22477 MsG0080048650.01.T01:CDS 50.0%
TCGTAGCACGACTTTGAGCA+AGG + contig389end:24455-24474 MsG0080048650.01.T01:three_prime_UTR 50.0%
TGAAGAAGTGGAGCGTGCTT+TGG + contig389end:21148-21167 MsG0080048650.01.T01:CDS 50.0%
TGATCGGAAACGACCTGCTT+TGG + contig389end:20214-20233 MsG0080048650.01.T01:CDS 50.0%
TTGGGGCTGAAAGTTTCCTC+AGG + contig389end:21930-21949 MsG0080048650.01.T01:CDS 50.0%
TTGGGTTATGCCCTGAGATC+TGG + contig389end:22679-22698 MsG0080048650.01.T01:intron 50.0%
! AGTTGATGCCAAGACCTACC+AGG - contig389end:20888-20907 None:intergenic 50.0%
! CAAGGGCATGAAACCTGGAT+TGG + contig389end:24473-24492 MsG0080048650.01.T01:three_prime_UTR 50.0%
! GATTAGGGTACCCATCTTCG+TGG - contig389end:24151-24170 None:intergenic 50.0%
! TCCCTTCCCCTTTTTACTGG+CGG + contig389end:21597-21616 MsG0080048650.01.T01:CDS 50.0%
! TTGAGCAAGGGCATGAAACC+TGG + contig389end:24468-24487 MsG0080048650.01.T01:three_prime_UTR 50.0%
! TTTGGAACCTGCTCATCCTC+AGG + contig389end:23196-23215 MsG0080048650.01.T01:CDS 50.0%
!! CAGGGGTGTCAAAATGAGTC+AGG + contig389end:21237-21256 MsG0080048650.01.T01:intron 50.0%
!! GATCGCATGTTTTGGACCGA+AGG + contig389end:24661-24680 MsG0080048650.01.T01:three_prime_UTR 50.0%
!! TGTCGACTCTTCCCTCACTT+AGG + contig389end:22299-22318 MsG0080048650.01.T01:intron 50.0%
AGTTGTGCAGAGAGACCTGC+CGG + contig389end:24549-24568 MsG0080048650.01.T01:three_prime_UTR 55.0%
ATGAGAGCCTGAGGATGAGC+AGG - contig389end:23206-23225 None:intergenic 55.0%
CAAGAAAATTGGGGCAGGGG+TGG - contig389end:23526-23545 None:intergenic 55.0%
CCCGCCAGTAAAAAGGGGAA+GGG - contig389end:21601-21620 None:intergenic 55.0%
CGACTCTTCCCTCACTTAGG+AGG + contig389end:22302-22321 MsG0080048650.01.T01:intron 55.0%
CGGCCTTGCATGATGAGGTT+TGG + contig389end:22123-22142 MsG0080048650.01.T01:CDS 55.0%
CTGGGCCTGACGTGACAATA+TGG - contig389end:21683-21702 None:intergenic 55.0%
GAAGAAGGCTGCTGACAGAC+GGG + contig389end:24298-24317 MsG0080048650.01.T01:CDS 55.0%
GCAGGTCACTATTTGTCCGG+TGG - contig389end:23669-23688 None:intergenic 55.0%
GCTCATCCTCAGGCTCTCAT+GGG + contig389end:23206-23225 MsG0080048650.01.T01:CDS 55.0%
GGAAACGACCTGCTTTGGCT+AGG + contig389end:20219-20238 MsG0080048650.01.T01:CDS 55.0%
GGAAGAAGGCTGCTGACAGA+CGG + contig389end:24297-24316 MsG0080048650.01.T01:CDS 55.0%
GGATGGTGTAGGAACACTGG+GGG + contig389end:21857-21876 MsG0080048650.01.T01:CDS 55.0%
GTCCCACCAAGCTTAATGGG+AGG + contig389end:21180-21199 MsG0080048650.01.T01:CDS 55.0%
TCCCGCCAGTAAAAAGGGGA+AGG - contig389end:21602-21621 None:intergenic 55.0%
TCCTCGGGCAAAGCTGTTGT+GGG + contig389end:24230-24249 MsG0080048650.01.T01:CDS 55.0%
TCTCTTGTACAGCTGCCGTG+TGG + contig389end:24835-24854 MsG0080048650.01.T01:three_prime_UTR 55.0%
TGCAGATCGCCAGACAGAAG+AGG - contig389end:21825-21844 None:intergenic 55.0%
TGCTCATCCTCAGGCTCTCA+TGG + contig389end:23205-23224 MsG0080048650.01.T01:CDS 55.0%
! ATCCATATTCCTGCACCGGC+AGG - contig389end:24567-24586 None:intergenic 55.0%
! CCCTTCCCCTTTTTACTGGC+GGG + contig389end:21598-21617 MsG0080048650.01.T01:CDS 55.0%
! GCTTTGCCCGAGGAGCTTTT+TGG - contig389end:24224-24243 None:intergenic 55.0%
!! TGTGGGCTGGCTCAAGCTTA+AGG + contig389end:24247-24266 MsG0080048650.01.T01:CDS 55.0%
ACCTCATCATGCAAGGCCGG+TGG - contig389end:22122-22141 None:intergenic 60.0%
CCTCATCATGCAAGGCCGGT+GGG - contig389end:22121-22140 None:intergenic 60.0%
CTCCTCGGGCAAAGCTGTTG+TGG + contig389end:24229-24248 MsG0080048650.01.T01:CDS 60.0%
GACCTGCCGGTGCAGGAATA+TGG + contig389end:24562-24581 MsG0080048650.01.T01:intron 60.0%
GGTGGGGAACACTCATCAGC+TGG - contig389end:23899-23918 None:intergenic 60.0%
TCGGGGCCTTCTATGCGCTT+TGG - contig389end:21540-21559 None:intergenic 60.0%
TGGGAACCCATGAGAGCCTG+AGG - contig389end:23215-23234 None:intergenic 60.0%
CCCACCGGCCTTGCATGATG+AGG + contig389end:22118-22137 MsG0080048650.01.T01:CDS 65.0%
CGGGCAAAGCTGTTGTGGGC+TGG + contig389end:24234-24253 MsG0080048650.01.T01:CDS 65.0%
GCCCACAACAGCTTTGCCCG+AGG - contig389end:24234-24253 None:intergenic 65.0%
GCAGAGAGACCTGCCGGTGC+AGG + contig389end:24555-24574 MsG0080048650.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
contig389end gene 20041 24940 20041 ID=MsG0080048650.01;Name=MsG0080048650.01
contig389end mRNA 20041 24940 20041 ID=MsG0080048650.01.T01;Parent=MsG0080048650.01;Name=MsG0080048650.01.T01;_AED=0.25;_eAED=0.25;_QI=90|1|1|1|0.87|0.77|9|569|630
contig389end exon 20041 20240 20041 ID=MsG0080048650.01.T01:exon:8667;Parent=MsG0080048650.01.T01
contig389end exon 20355 20430 20355 ID=MsG0080048650.01.T01:exon:8668;Parent=MsG0080048650.01.T01
contig389end exon 21143 21201 21143 ID=MsG0080048650.01.T01:exon:8669;Parent=MsG0080048650.01.T01
contig389end exon 21530 22023 21530 ID=MsG0080048650.01.T01:exon:8670;Parent=MsG0080048650.01.T01
contig389end exon 22102 22262 22102 ID=MsG0080048650.01.T01:exon:8671;Parent=MsG0080048650.01.T01
contig389end exon 22366 22569 22366 ID=MsG0080048650.01.T01:exon:8672;Parent=MsG0080048650.01.T01
contig389end exon 23098 23332 23098 ID=MsG0080048650.01.T01:exon:8673;Parent=MsG0080048650.01.T01
contig389end exon 23796 24570 23796 ID=MsG0080048650.01.T01:exon:8674;Parent=MsG0080048650.01.T01
contig389end exon 24593 24940 24593 ID=MsG0080048650.01.T01:exon:8675;Parent=MsG0080048650.01.T01
contig389end five_prime_UTR 20041 20130 20041 ID=MsG0080048650.01.T01:five_prime_utr;Parent=MsG0080048650.01.T01
contig389end CDS 20131 20240 20131 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end CDS 20355 20430 20355 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end CDS 21143 21201 21143 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end CDS 21530 22023 21530 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end CDS 22102 22262 22102 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end CDS 22366 22569 22366 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end CDS 23098 23332 23098 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end CDS 23796 24349 23796 ID=MsG0080048650.01.T01:cds;Parent=MsG0080048650.01.T01
contig389end three_prime_UTR 24350 24570 24350 ID=MsG0080048650.01.T01:three_prime_utr;Parent=MsG0080048650.01.T01
contig389end three_prime_UTR 24593 24940 24593 ID=MsG0080048650.01.T01:three_prime_utr;Parent=MsG0080048650.01.T01
Gene Sequence

>MsG0080048650.01.T01

ATGCACGGAAGGTACGTTGATCATCATGTAGCTAGGGCGGAGAAGAGAAGTTTGGATTCCACTTCTGCTGAAGATGGTCAGCCTGATCGGAAACGACCTGCTTTGGCTAGTGTGATTGTTGAAGCCTTGAAGGTGGATAGTATGCAGAAACTGTGTTCATCACTAGAACCTATTCTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGTCCCACCAAGCTTAATGGGAGGTCTTCTCCAAAGCGCATAGAAGGCCCCGATGACAATAATTTACAATTGCACTTCAAGACCAGACTATCCCTTCCCCTTTTTACTGGCGGGAAAGTAGAAGGTGAGCAAGGGGCAGCCATACATATTGTTTTGGTTGATGCAAACACAGGCCATATTGTCACGTCAGGCCCAGAGTCATGTGCCAAACTAGATGTATTTGTTCTTGAGGGGGATTTCAATAATGAGGACGATGAAAATTGGAGTGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAACGTGAAGGAAAAAGGCCTCTTCTGTCTGGCGATCTGCAAGTTATATTAAAGGATGGTGTAGGAACACTGGGGGAGATCTCATTTACTGACAACTCCAGTTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTTCCTCAGGTTTTTGTGATGGAATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAACTATACAAGAAACACTACCCACCGGCCTTGCATGATGAGGTTTGGAGACTGGAGAAGATTGGTAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCAGGAGTATTTAATGTTGAAGACTTCCTAAGACTTGTTATCAGAGACCCTCAGAGATTGCGTAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATCCTTGTTGAGCATGCGAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATATTATCCCGAGGATGCAAGAAATGTGGGGGTTGTTTTCAATCACATTTATGAATTGAGCGGCTTAATTGCCAACGACCAGTATCACTCAGCTGATTCTCTCTCTGAGAGTCAAAAGGTTTATGTGGACACGTTGGTGAAGAAAGCATATGATAATTGGATGCACGTTATTGAGTATGATGGGAAGTCTCTACTAAATTACAATCAGGATAAAAATTTGGAACCTGCTCATCCTCAGGCTCTCATGGGTTCCCATGAGTATTCAAACTTAATACAGCAGACTTCTATCCATAGTTTGCCACATCCAGTAAATACAGGCCAACCTTCAATGGATACAGGAGCAACAGTTGGAGGTTATCATGATGGCACAACTACCAGCTTCTCCATGCAATCACAGAATACTAATCTTAATTCTTCTATCCAATTTGATGATAACGCATTTTCACTACAAAGCCAGCTGATGAGTGTTCCCCACCAAGCTCAACTTCAAAGAAGTGAAAATGGGATGATGCTTGGTATGCCACAAACAGTAACACACGGGTTCCAGACTGCCAGCATTTCAAATTCTACTTACAGAGGAGTTGAAGACTTCTTCCCAGAGGAAGAAATACGTATTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATTTGCTCCGTATGTTTAACATGGGAAGCCATGCACATGCTTCTTTCAATTCCCACGAAGATGGGTACCCTAATCCATCTGCATACATGCCTGCAAACAACATGAGCTACAATTTTGACGATGAGCCAAAAAGCTCCTCGGGCAAAGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGTATTTTTGTTAGGAAGAAGGCTGCTGACAGACGGGCTCAACTCATTGAATTAGATGACTCTTGA
Protein sequence

>MsG0080048650.01.T01

MHGRYVDHHVARAEKRSLDSTSAEDGQPDRKRPALASVIVEALKVDSMQKLCSSLEPILRRVVSEEVERALAKLGPTKLNGRSSPKRIEGPDDNNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLVDANTGHIVTSGPESCAKLDVFVLEGDFNNEDDENWSEEEFESHIVKEREGKRPLLSGDLQVILKDGVGTLGEISFTDNSSWIRSRKFRLGLKVSSGFCDGMRIREAKSEAFTVKDHRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGVFNVEDFLRLVIRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYHSADSLSESQKVYVDTLVKKAYDNWMHVIEYDGKSLLNYNQDKNLEPAHPQALMGSHEYSNLIQQTSIHSLPHPVNTGQPSMDTGATVGGYHDGTTTSFSMQSQNTNLNSSIQFDDNAFSLQSQLMSVPHQAQLQRSENGMMLGMPQTVTHGFQTASISNSTYRGVEDFFPEEEIRIRSHEMLENEDMQHLLRMFNMGSHAHASFNSHEDGYPNPSAYMPANNMSYNFDDEPKSSSGKAVVGWLKLKAALRWGIFVRKKAADRRAQLIELDDS*