AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048956.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048956.01.T01 MTR_3g117880 95.884 413 12 3 1 409 1 412 0.0 805
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048956.01.T01 AT2G20980 52.141 397 168 7 17 408 17 396 6.86e-125 367

Find 47 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAAGCGGGAGGGGTTTC+AGG 0.144299 contig567end:+14469 MsG0080048956.01.T01:intergenic
AGGGGTTTGGTAATGGATTT+AGG 0.166281 contig567end:+14325 MsG0080048956.01.T01:intergenic
TTGGTAATGGATTTAGGGTT+AGG 0.247428 contig567end:+14331 MsG0080048956.01.T01:intergenic
GGATTTAGGGTTAGGGTTAG+AGG 0.317608 contig567end:+14339 MsG0080048956.01.T01:intergenic
ACCAGAGAATTTGTCAAGTT+GGG 0.333949 contig567end:+14291 MsG0080048956.01.T01:intergenic
GGGGTTTGGTAATGGATTTA+GGG 0.358994 contig567end:+14326 MsG0080048956.01.T01:intergenic
AGGGTTAGGGTTAGAGGGTT+GGG 0.369684 contig567end:+14345 MsG0080048956.01.T01:intergenic
GGGATCGTCGGTGAGGGGTT+TGG 0.378542 contig567end:+14312 MsG0080048956.01.T01:intergenic
GTCGGTGAGGGGTTTGGTAA+TGG 0.386273 contig567end:+14318 MsG0080048956.01.T01:intergenic
GACCAGAGAATTTGTCAAGT+TGG 0.402451 contig567end:+14290 MsG0080048956.01.T01:intergenic
GTCGTCAAACCACGAAGATC+TGG 0.403762 contig567end:-14521 MsG0080048956.01.T01:exon
GTTTAACCCCTGCTGAGCTT+AGG 0.407094 contig567end:-14249 MsG0080048956.01.T01:exon
TTTAACCCCTGCTGAGCTTA+GGG 0.429241 contig567end:-14248 MsG0080048956.01.T01:exon
GTGTTGTGTATCAAAGAAAA+AGG 0.429986 contig567end:-14546 MsG0080048956.01.T01:exon
TTGAACGGCGTCTCTGAAAA+CGG 0.430849 contig567end:+14381 MsG0080048956.01.T01:intergenic
GATTTAGGGTTAGGGTTAGA+GGG 0.445132 contig567end:+14340 MsG0080048956.01.T01:intergenic
TAGGGTTAGGGTTAGAGGGT+TGG 0.445470 contig567end:+14344 MsG0080048956.01.T01:intergenic
TGGTAATGGATTTAGGGTTA+GGG 0.451006 contig567end:+14332 MsG0080048956.01.T01:intergenic
CCCCAACTTGACAAATTCTC+TGG 0.465454 contig567end:-14292 MsG0080048956.01.T01:exon
CGGAGAAGGAGAAGCGGGAG+GGG 0.466441 contig567end:+14462 MsG0080048956.01.T01:intergenic
AAGTTGGGGATCGTCGGTGA+GGG 0.467511 contig567end:+14306 MsG0080048956.01.T01:intergenic
ACAGATTCCCTAAGCTCAGC+AGG 0.478207 contig567end:+14241 MsG0080048956.01.T01:intergenic
TAGGGTTAGAGGGTTGGGTA+TGG 0.478263 contig567end:+14350 MsG0080048956.01.T01:intergenic
TACACAACACACGATGACTT+TGG 0.481449 contig567end:+14559 MsG0080048956.01.T01:intergenic
TCTCTGAAAACGGACATATC+AGG 0.488594 contig567end:+14391 MsG0080048956.01.T01:intergenic
ATCAAGCGGAGAAGGAGAAG+CGG 0.493496 contig567end:+14456 MsG0080048956.01.T01:intergenic
TCAAGCGGAGAAGGAGAAGC+GGG 0.501964 contig567end:+14457 MsG0080048956.01.T01:intergenic
GCGGAGAAGGAGAAGCGGGA+GGG 0.505756 contig567end:+14461 MsG0080048956.01.T01:intergenic
AGCAGGGGTTAAACATTGGT+TGG 0.526618 contig567end:+14258 MsG0080048956.01.T01:intergenic
GAAGAAGAATACTTAATGAC+GGG 0.529158 contig567end:+14193 MsG0080048956.01.T01:intergenic
ATGCTGTGTCTTACAAGCAT+AGG 0.536682 contig567end:-14420 MsG0080048956.01.T01:exon
TCATCAGCATCAAGCGGAGA+AGG 0.537477 contig567end:+14448 MsG0080048956.01.T01:intergenic
TGCTGTGTCTTACAAGCATA+GGG 0.548195 contig567end:-14419 MsG0080048956.01.T01:exon
CCAGAGAATTTGTCAAGTTG+GGG 0.563311 contig567end:+14292 MsG0080048955.01.T01:intergenic
TTTGTCAAGTTGGGGATCGT+CGG 0.563964 contig567end:+14300 MsG0080048955.01.T01:intergenic
CAAGTTGGGGATCGTCGGTG+AGG 0.565523 contig567end:+14305 MsG0080048955.01.T01:intergenic
AGAAGAAGAATACTTAATGA+CGG 0.565529 contig567end:+14192 MsG0080048955.01.T01:intergenic
AGTTGGGGATCGTCGGTGAG+GGG 0.571103 contig567end:+14307 MsG0080048955.01.T01:intergenic
CTCTGTCGTGAAGAGAAAGC+AGG 0.575382 contig567end:+14494 MsG0080048955.01.T01:intergenic
GCAGGAGATCCAGATCTTCG+TGG 0.577212 contig567end:+14512 MsG0080048955.01.T01:intergenic
AGCGGAGAAGGAGAAGCGGG+AGG 0.584047 contig567end:+14460 MsG0080048955.01.T01:intergenic
GCTCAGCAGGGGTTAAACAT+TGG 0.588791 contig567end:+14254 MsG0080048955.01.T01:intergenic
AAGAATACTTAATGACGGGT+AGG 0.592247 contig567end:+14197 MsG0080048955.01.T01:intergenic
CAGATTCCCTAAGCTCAGCA+GGG 0.634673 contig567end:+14242 MsG0080048955.01.T01:intergenic
TCATCGTCATCAGCATCAAG+CGG 0.640174 contig567end:+14442 MsG0080048955.01.T01:intergenic
GGTATGGAGACAATCTTGAA+CGG 0.675223 contig567end:+14366 MsG0080048955.01.T01:intergenic
AGATTCCCTAAGCTCAGCAG+GGG 0.676546 contig567end:+14243 MsG0080048955.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATATGAAATAATTAAA+TGG + contig567end:11865-11884 MsG0080048956.01.T01:intergenic 10.0%
!! AAATAAATTCTTTATTATGC+AGG + contig567end:12983-13002 MsG0080048956.01.T01:intergenic 15.0%
!! ACTTTACAAAAGTAATAAAA+AGG + contig567end:11442-11461 MsG0080048956.01.T01:intergenic 15.0%
!! CTTTACAAAAGTAATAAAAA+GGG + contig567end:11642-11661 MsG0080048956.01.T01:intergenic 15.0%
!!! TTATTTTGATTATTTAACTG+TGG - contig567end:10969-10988 MsG0080048956.01.T01:intron 15.0%
!!! TTTATTTCTCTTAGTTATAT+TGG - contig567end:12996-13015 MsG0080048956.01.T01:intron 15.0%
!! AAAAAAAAAAGAGATTTCAG+AGG + contig567end:10773-10792 MsG0080048956.01.T01:intergenic 20.0%
!! AAATCATCTTCTGTTAATAT+GGG - contig567end:12646-12665 MsG0080048956.01.T01:CDS 20.0%
!! AAATTGCATATACAATGATT+GGG + contig567end:11028-11047 MsG0080048956.01.T01:intergenic 20.0%
!! CTATAATGTCTTTGTAAATA+TGG + contig567end:11408-11427 MsG0080048956.01.T01:intergenic 20.0%
!! GATAATAAATAACATGTAAC+AGG + contig567end:12620-12639 MsG0080048956.01.T01:intergenic 20.0%
!! TAAATTGCATATACAATGAT+TGG + contig567end:11029-11048 MsG0080048956.01.T01:intergenic 20.0%
!! TATTTATCTTGATGTTGTAT+AGG - contig567end:14269-14288 MsG0080048956.01.T01:exon 20.0%
!! TCAATGAATATATCATTCAA+GGG - contig567end:13136-13155 MsG0080048956.01.T01:intron 20.0%
!! TGAATTAGATCTTATTAGTT+CGG - contig567end:12771-12790 MsG0080048956.01.T01:CDS 20.0%
!!! AACTTACTATTTAAAACAGT+TGG - contig567end:13171-13190 MsG0080048956.01.T01:intron 20.0%
!!! ACATGTTATTTATTATCTTC+AGG - contig567end:12623-12642 MsG0080048956.01.T01:intron 20.0%
!!! AGACTAACTGTTAATTTTAA+TGG - contig567end:12382-12401 MsG0080048956.01.T01:intron 20.0%
!!! ATCAAGATAAATATTCCTTT+TGG + contig567end:14262-14281 MsG0080048956.01.T01:intergenic 20.0%
!!! ATTACTTTTGTAAAGTTTGA+GGG - contig567end:11446-11465 MsG0080048956.01.T01:intron 20.0%
!!! CTTTTATAAGAACTTGAAAT+AGG + contig567end:12001-12020 MsG0080048956.01.T01:intergenic 20.0%
!!! TACTTAACTTATCTTTTGAA+AGG + contig567end:13112-13131 MsG0080048956.01.T01:intergenic 20.0%
!!! TATTACTTTTGTAAAGTTTG+AGG - contig567end:11445-11464 MsG0080048956.01.T01:intron 20.0%
!!! TCAAGATAAATATTCCTTTT+GGG + contig567end:14261-14280 MsG0080048956.01.T01:intergenic 20.0%
!!! TCTTATTTCTGTATAATTAC+TGG - contig567end:13518-13537 MsG0080048956.01.T01:intron 20.0%
! AAAAAGAAACATGGTTTACA+AGG + contig567end:11728-11747 MsG0080048956.01.T01:intergenic 25.0%
! AAAGATTAATGGTTATGTAG+TGG + contig567end:11791-11810 MsG0080048956.01.T01:intergenic 25.0%
! ACTTAGCAATATAAATCAAG+TGG + contig567end:13815-13834 MsG0080048956.01.T01:intergenic 25.0%
! AGAAACAGAATAATAATCCT+GGG + contig567end:11677-11696 MsG0080048956.01.T01:intergenic 25.0%
! AGAAGAAGAATACTTAATGA+CGG + contig567end:10411-10430 MsG0080048956.01.T01:intergenic 25.0%
! ATAAGTCTGATTTAAATGTG+TGG - contig567end:11132-11151 MsG0080048956.01.T01:intron 25.0%
! ATCAGACTTATTTCAGTAAA+TGG + contig567end:11123-11142 MsG0080048956.01.T01:intergenic 25.0%
! ATTCAGAAAACAAGTTCAAA+TGG - contig567end:10561-10580 MsG0080048956.01.T01:intron 25.0%
! CCTGAAATAACAAAGATTAA+TGG + contig567end:11802-11821 MsG0080048956.01.T01:intergenic 25.0%
! GAAATCATCTTCTGTTAATA+TGG - contig567end:12645-12664 MsG0080048956.01.T01:CDS 25.0%
! GGTGACAAATAAAATAAAAG+AGG - contig567end:11220-11239 MsG0080048956.01.T01:intron 25.0%
! GTCAATGAATATATCATTCA+AGG - contig567end:13135-13154 MsG0080048956.01.T01:intron 25.0%
! TATCTACATTGTTATCAGTT+GGG - contig567end:13046-13065 MsG0080048956.01.T01:intron 25.0%
! TGAATCACTATCAAAATACA+TGG - contig567end:13789-13808 MsG0080048956.01.T01:intron 25.0%
! TGTAAGAAGAAAAAGAAACA+TGG + contig567end:11737-11756 MsG0080048956.01.T01:intergenic 25.0%
! TTATCTACATTGTTATCAGT+TGG - contig567end:13045-13064 MsG0080048956.01.T01:intron 25.0%
! TTCAGAAAACAAGTTCAAAT+GGG - contig567end:10562-10581 MsG0080048956.01.T01:intron 25.0%
! TTGACAACTAATTACTTTCT+TGG + contig567end:13637-13656 MsG0080048956.01.T01:intergenic 25.0%
! TTGTATATGCAATTTACCAA+AGG - contig567end:11033-11052 MsG0080048956.01.T01:intron 25.0%
!! AAGTTGATCTCTATTTATGT+TGG - contig567end:14353-14372 MsG0080048956.01.T01:exon 25.0%
!! ATATGTTTTCATCCTAAGAA+AGG + contig567end:14079-14098 MsG0080048956.01.T01:intergenic 25.0%
!! ATTTTTCTCAGAGTACAAAT+AGG + contig567end:14585-14604 MsG0080048956.01.T01:intergenic 25.0%
!! CAAGATAAATATTCCTTTTG+GGG + contig567end:14260-14279 MsG0080048956.01.T01:intergenic 25.0%
!! GTATCTATTTGTACTCTTTT+GGG - contig567end:14551-14570 MsG0080048956.01.T01:exon 25.0%
!! TGTATCTATTTGTACTCTTT+TGG - contig567end:14550-14569 MsG0080048956.01.T01:exon 25.0%
!! TTATGATTCTTTTAGCAGAT+TGG - contig567end:14103-14122 MsG0080048956.01.T01:CDS 25.0%
!!! ACTATTTCTCTTTTCTTGTT+TGG - contig567end:10627-10646 MsG0080048956.01.T01:intron 25.0%
!!! ACTTTGGTTAGTTTTGTTTA+GGG + contig567end:10028-10047 MsG0080048956.01.T01:intergenic 25.0%
!!! AGCTTTTAATTGAATTGAAC+TGG - contig567end:13453-13472 MsG0080048956.01.T01:intron 25.0%
!!! CCATTAATCTTTGTTATTTC+AGG - contig567end:11799-11818 MsG0080048956.01.T01:exon 25.0%
!!! CTTCTTCAAATTTGTTTTGT+CGG + contig567end:12162-12181 MsG0080048956.01.T01:intergenic 25.0%
!!! CTTTTTGTTTTGTTTTGACT+TGG - contig567end:14483-14502 MsG0080048956.01.T01:exon 25.0%
!!! GGTTCTTTTTTCATCATTTT+TGG + contig567end:12486-12505 MsG0080048956.01.T01:intergenic 25.0%
!!! GTTGTTGTTAATTTTCTTCA+CGG - contig567end:13301-13320 MsG0080048956.01.T01:intron 25.0%
!!! TTACTTTTGTAAAGTTTGAG+GGG - contig567end:11447-11466 MsG0080048956.01.T01:intron 25.0%
!!! TTATTTCTCTTGCTTTTGAA+GGG - contig567end:10798-10817 MsG0080048956.01.T01:intron 25.0%
!!! TTGTTGTTAATTTTCTTCAC+GGG - contig567end:13302-13321 MsG0080048956.01.T01:intron 25.0%
!!! TTTATTTCTCTTGCTTTTGA+AGG - contig567end:10797-10816 MsG0080048956.01.T01:intron 25.0%
!!! TTTTGATTTCATATGACATG+TGG - contig567end:12033-12052 MsG0080048956.01.T01:intron 25.0%
AAAAAAGGAAGCAGATGATA+AGG + contig567end:10740-10759 MsG0080048955.01.T01:intergenic 30.0%
AAATAAATTGTCAGCTCAGT+AGG + contig567end:14298-14317 MsG0080048956.01.T01:intergenic 30.0%
AAGTGAATAAATACAGCAAG+TGG + contig567end:13741-13760 MsG0080048956.01.T01:intergenic 30.0%
AAGTGCAATTTAACATGACT+TGG + contig567end:13253-13272 MsG0080048956.01.T01:intergenic 30.0%
AATAGATACAAAACCACAGA+CGG + contig567end:14540-14559 MsG0080048956.01.T01:intergenic 30.0%
ACAACAACGAAAAACATTGA+TGG + contig567end:13289-13308 MsG0080048956.01.T01:intergenic 30.0%
ACATTATTTATATCCGTCTG+TGG - contig567end:14524-14543 MsG0080048956.01.T01:exon 30.0%
AGATTACTGAGGTAGATAAA+TGG + contig567end:14213-14232 MsG0080048956.01.T01:intergenic 30.0%
AGCTATTGCATATGGAAAAT+TGG - contig567end:10588-10607 MsG0080048956.01.T01:intron 30.0%
AGTGAATAAATACAGCAAGT+GGG + contig567end:13740-13759 MsG0080048956.01.T01:intergenic 30.0%
AGTGAGATCAAATACAGATT+TGG + contig567end:13683-13702 MsG0080048956.01.T01:intergenic 30.0%
ATAATAATCCTGGGACATAA+TGG + contig567end:11668-11687 MsG0080048956.01.T01:intergenic 30.0%
ATCAGTATTCTATTGTAGCA+AGG - contig567end:11886-11905 MsG0080048956.01.T01:CDS 30.0%
ATCCACTAACCTATAACTTA+TGG - contig567end:11914-11933 MsG0080048956.01.T01:CDS 30.0%
ATCTACATTGTTATCAGTTG+GGG - contig567end:13047-13066 MsG0080048956.01.T01:intron 30.0%
CAAAGCAAATAAGATTACTG+AGG + contig567end:14224-14243 MsG0080048956.01.T01:intergenic 30.0%
CAGAAACAGAATAATAATCC+TGG + contig567end:11678-11697 MsG0080048956.01.T01:intergenic 30.0%
CAGATGTGAATTATGATTCA+TGG + contig567end:11301-11320 MsG0080048956.01.T01:intergenic 30.0%
CATCTTCATAATTTGGTTAG+GGG + contig567end:10850-10869 MsG0080048956.01.T01:intergenic 30.0%
CCATCTTCATAATTTGGTTA+GGG + contig567end:10851-10870 MsG0080048956.01.T01:intergenic 30.0%
CCTAACCAAATTATGAAGAT+GGG - contig567end:10849-10868 MsG0080048956.01.T01:intron 30.0%
CTGATTTAAATGTGTGGAAT+TGG - contig567end:11138-11157 MsG0080048956.01.T01:intron 30.0%
GAAATCATGCAAAAGTGAAA+GGG + contig567end:14155-14174 MsG0080048956.01.T01:intergenic 30.0%
GAAGAAGAATACTTAATGAC+GGG + contig567end:10410-10429 MsG0080048956.01.T01:intergenic 30.0%
GTAGATAACCTAGTAAGATT+TGG + contig567end:13033-13052 MsG0080048956.01.T01:intergenic 30.0%
GTGTTGTGTATCAAAGAAAA+AGG - contig567end:10054-10073 MsG0080048956.01.T01:exon 30.0%
GTTGGATGTAAAAAGAGTAA+AGG - contig567end:12696-12715 MsG0080048956.01.T01:intron 30.0%
TCTGCTAAAAGAATCATAAC+AGG + contig567end:14102-14121 MsG0080048956.01.T01:intergenic 30.0%
TCTGTGTATATTCAGGAATT+TGG - contig567end:10479-10498 MsG0080048956.01.T01:intron 30.0%
TCTTAGTTATATTGGCAGTA+GGG - contig567end:13004-13023 MsG0080048956.01.T01:intron 30.0%
TGAAATCATGCAAAAGTGAA+AGG + contig567end:14156-14175 MsG0080048956.01.T01:intergenic 30.0%
TGAATATATCATTCAAGGGT+TGG - contig567end:13140-13159 MsG0080048956.01.T01:intron 30.0%
TTCTTTATTATGCAGGACTT+TGG + contig567end:12976-12995 MsG0080048956.01.T01:intergenic 30.0%
TTGATCTCTATTTATGTTGG+AGG - contig567end:14356-14375 MsG0080048956.01.T01:exon 30.0%
TTTAACTGTGGAATTGCAAT+AGG - contig567end:10981-11000 MsG0080048956.01.T01:intron 30.0%
TTTGCATGATTTCAATTCCT+TGG - contig567end:14162-14181 MsG0080048956.01.T01:intron 30.0%
! ATATTCAGGAATTTGGTGAA+TGG - contig567end:10486-10505 MsG0080048956.01.T01:intron 30.0%
! CATATGGAAAATTGGTTCTT+TGG - contig567end:10596-10615 MsG0080048956.01.T01:intron 30.0%
! CATTTTGTTAAAAGATCGAG+AGG + contig567end:13900-13919 MsG0080048956.01.T01:intergenic 30.0%
! TCGTTCTTTTTACAGTTGAT+AGG + contig567end:13612-13631 MsG0080048956.01.T01:intergenic 30.0%
! TGTTTTCTGCCATAAGTTAT+AGG + contig567end:11926-11945 MsG0080048956.01.T01:intergenic 30.0%
!! GAAAAGTATTAATCGAAGTC+TGG + contig567end:11706-11725 MsG0080048956.01.T01:intergenic 30.0%
!!! GACTTTGGTTAGTTTTGTTT+AGG + contig567end:10029-10048 MsG0080048956.01.T01:intergenic 30.0%
!!! GTTAGTTTTGTTTAGGGTTT+TGG + contig567end:10022-10041 MsG0080048956.01.T01:intergenic 30.0%
AACAATAAACCATGGTCAAG+TGG - contig567end:14186-14205 MsG0080048956.01.T01:intron 35.0%
AACCACTTGATTTAGATCGT+AGG - contig567end:13856-13875 MsG0080048956.01.T01:intron 35.0%
AAGTAATAAAAAGGGCAACC+CGG + contig567end:11634-11653 MsG0080048956.01.T01:intergenic 35.0%
AATGTAGCAGATGAAATGAG+TGG + contig567end:13942-13961 MsG0080048956.01.T01:intergenic 35.0%
ACAACCTCTTGTGTAAAAAC+CGG - contig567end:11536-11555 MsG0080048956.01.T01:intron 35.0%
ACCAGAGAATTTGTCAAGTT+GGG + contig567end:10312-10331 MsG0080048956.01.T01:intergenic 35.0%
ACCATGGTTTATTGTTTCCA+AGG + contig567end:14182-14201 MsG0080048956.01.T01:intergenic 35.0%
AGAAAATAAATACTACCGCG+TGG - contig567end:12865-12884 MsG0080048956.01.T01:intron 35.0%
AGAGATTATCTCAAGTCAGA+AGG - contig567end:12113-12132 MsG0080048956.01.T01:CDS 35.0%
AGTGAACCTTCGAAACTATA+TGG + contig567end:12925-12944 MsG0080048956.01.T01:intergenic 35.0%
ATAGGATCTTTAGTCACGTT+TGG + contig567end:13594-13613 MsG0080048956.01.T01:intergenic 35.0%
ATATATCATTCAAGGGTTGG+TGG - contig567end:13143-13162 MsG0080048956.01.T01:intron 35.0%
ATATTCAGTTTGACCCCAAA+AGG - contig567end:14244-14263 MsG0080048956.01.T01:exon 35.0%
CATAACAAGAAACCTAGCAT+GGG + contig567end:11367-11386 MsG0080048956.01.T01:intergenic 35.0%
CCCATCTTCATAATTTGGTT+AGG + contig567end:10852-10871 MsG0080048956.01.T01:intergenic 35.0%
CCCTAACCAAATTATGAAGA+TGG - contig567end:10848-10867 MsG0080048956.01.T01:intron 35.0%
CGTTAAGATTCTCATTGATG+TGG + contig567end:14132-14151 MsG0080048956.01.T01:intergenic 35.0%
CTCTTAGTTATATTGGCAGT+AGG - contig567end:13003-13022 MsG0080048956.01.T01:intron 35.0%
GAAACTTAAGAACAGCATTC+AGG - contig567end:12087-12106 MsG0080048956.01.T01:CDS 35.0%
GATTCTGTCTGTGTATATTC+AGG - contig567end:10472-10491 MsG0080048956.01.T01:intron 35.0%
GTAGTTACTCTTAACTCCTT+TGG + contig567end:11052-11071 MsG0080048956.01.T01:intergenic 35.0%
GTGAAATTGTTATCTGTGGA+TGG - contig567end:12191-12210 MsG0080048956.01.T01:intron 35.0%
GTGAACCTTCGAAACTATAT+GGG + contig567end:12924-12943 MsG0080048956.01.T01:intergenic 35.0%
GTGCATTTGCTTTGATCATT+TGG + contig567end:12516-12535 MsG0080048956.01.T01:intergenic 35.0%
GTGGATGTAACATATACATG+TGG - contig567end:12052-12071 MsG0080048956.01.T01:intron 35.0%
GTTGTCAACAAAATTACCGT+TGG - contig567end:13649-13668 MsG0080048956.01.T01:intron 35.0%
TAAAAAGAGTAAAGGCAGAG+AGG - contig567end:12704-12723 MsG0080048956.01.T01:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - contig567end:11488-11507 MsG0080048956.01.T01:intron 35.0%
TAAAGTTTCCATTATGTCCC+AGG - contig567end:11657-11676 MsG0080048956.01.T01:intron 35.0%
TAGGGATACCAAATCTTACT+AGG - contig567end:13022-13041 MsG0080048956.01.T01:intron 35.0%
TCCACAGATAACAATTTCAC+TGG + contig567end:12191-12210 MsG0080048956.01.T01:intergenic 35.0%
TCCTTGGAAACAATAAACCA+TGG - contig567end:14178-14197 MsG0080048956.01.T01:intron 35.0%
TGAGATGCTAAAAAGGATTC+AGG - contig567end:12546-12565 MsG0080048956.01.T01:intron 35.0%
TGCCATAAGTTATAGGTTAG+TGG + contig567end:11919-11938 MsG0080048956.01.T01:intergenic 35.0%
TTCTGCTGACAAAATTGATG+TGG + contig567end:13564-13583 MsG0080048956.01.T01:intergenic 35.0%
TTGATTACGGAGTTTGCAAA+GGG - contig567end:10880-10899 MsG0080048956.01.T01:intron 35.0%
! AAAACATGGTTGATGTTGTG+TGG - contig567end:13391-13410 MsG0080048956.01.T01:intron 35.0%
! ACACAACATCAACCATGTTT+TGG + contig567end:13392-13411 MsG0080048956.01.T01:intergenic 35.0%
! AGAATTGAAGAGTGCAAAGA+CGG + contig567end:10691-10710 MsG0080048956.01.T01:intergenic 35.0%
! AGATTCTTTCTCTGGAAGTT+GGG - contig567end:10509-10528 MsG0080048956.01.T01:intron 35.0%
! CTTTGATCATTTGGAGTCTT+TGG + contig567end:12507-12526 MsG0080048956.01.T01:intergenic 35.0%
! TCTGACTTGAGATAATCTCT+TGG + contig567end:12113-12132 MsG0080048956.01.T01:intergenic 35.0%
! TTGATAGCCATTCAATAGCT+TGG - contig567end:11268-11287 MsG0080048956.01.T01:intron 35.0%
! TTTAACATGACTTGGATCAC+AGG + contig567end:13245-13264 MsG0080048956.01.T01:intergenic 35.0%
!! AAGAATACTTAATGACGGGT+AGG + contig567end:10406-10425 MsG0080048956.01.T01:intergenic 35.0%
!! AATTTTGATACCAGCAATGC+AGG - contig567end:12297-12316 MsG0080048956.01.T01:intron 35.0%
!! AGATTTCTTTCTGAGATTGC+AGG - contig567end:12354-12373 MsG0080048956.01.T01:intron 35.0%
!! TGGTAATGGATTTAGGGTTA+GGG + contig567end:10271-10290 MsG0080048956.01.T01:intergenic 35.0%
!! TGTTTGGTAATGCTTATCAG+AGG - contig567end:10643-10662 MsG0080048956.01.T01:intron 35.0%
!! TTGGTAATGGATTTAGGGTT+AGG + contig567end:10272-10291 MsG0080048956.01.T01:intergenic 35.0%
!! TTTGTTATTTCAGGCGTCAA+GGG - contig567end:11808-11827 MsG0080048956.01.T01:exon 35.0%
!!! TGTTGCTCTTGTTTTACTGT+GGG - contig567end:14454-14473 MsG0080048956.01.T01:exon 35.0%
AAAAGAGATTTCAGAGGCGA+TGG + contig567end:10767-10786 MsG0080048955.01.T01:intergenic 40.0%
AAAGCAAATGCACAACGAAG+AGG - contig567end:12523-12542 MsG0080048956.01.T01:intron 40.0%
AAATAAATACTACCGCGTGG+TGG - contig567end:12868-12887 MsG0080048956.01.T01:intron 40.0%
ACCAACTAACCTCCTATTGA+AGG + contig567end:14416-14435 MsG0080048956.01.T01:intergenic 40.0%
AGAGGCGATGGTTGAAAAAA+AGG + contig567end:10755-10774 MsG0080048956.01.T01:intergenic 40.0%
AGATCTTATTAGTTCGGACG+AGG - contig567end:12777-12796 MsG0080048956.01.T01:CDS 40.0%
AGGTGCCCATCTTCATAATT+TGG + contig567end:10857-10876 MsG0080048956.01.T01:intergenic 40.0%
AGTCATCTTGTCAAGCATCA+TGG + contig567end:14050-14069 MsG0080048956.01.T01:intergenic 40.0%
ATAAATGGACCACTTGACCA+TGG + contig567end:14198-14217 MsG0080048956.01.T01:intergenic 40.0%
ATCAAGTGGTTGAGAGAAAC+TGG + contig567end:13847-13866 MsG0080048956.01.T01:intergenic 40.0%
ATCTGTGGATGGTATCAGAA+AGG - contig567end:12202-12221 MsG0080048956.01.T01:intron 40.0%
ATGACTCTGTAGCCTTTCTT+AGG - contig567end:14064-14083 MsG0080048956.01.T01:CDS 40.0%
ATGCTGTGTCTTACAAGCAT+AGG - contig567end:10180-10199 MsG0080048956.01.T01:exon 40.0%
ATGGGAAGAGCTATTGCATA+TGG - contig567end:10580-10599 MsG0080048956.01.T01:intron 40.0%
ATTGCGACCAAGCTATTGAA+TGG + contig567end:11278-11297 MsG0080048956.01.T01:intergenic 40.0%
ATTTGTCACCACAAAGTGAC+AGG + contig567end:11210-11229 MsG0080048956.01.T01:intergenic 40.0%
CAACCTCTTGTGTAAAAACC+GGG - contig567end:11537-11556 MsG0080048956.01.T01:intron 40.0%
CAACTAACCTCCTATTGAAG+GGG + contig567end:14414-14433 MsG0080048956.01.T01:intergenic 40.0%
CCAACTAACCTCCTATTGAA+GGG + contig567end:14415-14434 MsG0080048956.01.T01:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - contig567end:11568-11587 MsG0080048956.01.T01:intron 40.0%
CTCTATTTATGTTGGAGGCT+TGG - contig567end:14361-14380 MsG0080048956.01.T01:exon 40.0%
CTTATGCATGTGTCCATTAG+AGG - contig567end:12585-12604 MsG0080048956.01.T01:intron 40.0%
GAAGAGGTGAGATGCTAAAA+AGG - contig567end:12539-12558 MsG0080048956.01.T01:intron 40.0%
GACCAGAGAATTTGTCAAGT+TGG + contig567end:10313-10332 MsG0080048956.01.T01:intergenic 40.0%
GCAGATGATAAGGAATACCT+TGG + contig567end:10730-10749 MsG0080048956.01.T01:intergenic 40.0%
GCATAACAAGAAACCTAGCA+TGG + contig567end:11368-11387 MsG0080048956.01.T01:intergenic 40.0%
GCATATCAAACCCCTTCAAT+AGG - contig567end:14401-14420 MsG0080048956.01.T01:exon 40.0%
GCCAGTGAAATTGTTATCTG+TGG - contig567end:12187-12206 MsG0080048956.01.T01:intron 40.0%
GGTATGGAGACAATCTTGAA+CGG + contig567end:10237-10256 MsG0080048956.01.T01:intergenic 40.0%
GTGAATGGAGATTCTTTCTC+TGG - contig567end:10501-10520 MsG0080048956.01.T01:intron 40.0%
GTTGATTACGGAGTTTGCAA+AGG - contig567end:10879-10898 MsG0080048956.01.T01:intron 40.0%
GTTGCGTACAATACACCAAA+TGG - contig567end:11564-11583 MsG0080048956.01.T01:intron 40.0%
TAAAGTTTGAGGGGTAACCT+TGG - contig567end:11456-11475 MsG0080048956.01.T01:intron 40.0%
TACACAACACACGATGACTT+TGG + contig567end:10044-10063 MsG0080048956.01.T01:intergenic 40.0%
TAGTGCCCATATAGTTTCGA+AGG - contig567end:12916-12935 MsG0080048956.01.T01:intron 40.0%
TATCAAACCCCTTCAATAGG+AGG - contig567end:14404-14423 MsG0080048956.01.T01:exon 40.0%
TCAAGTGGTTGAGAGAAACT+GGG + contig567end:13846-13865 MsG0080048956.01.T01:intergenic 40.0%
TCTTGTGTAAAAACCGGGTT+AGG - contig567end:11542-11561 MsG0080048956.01.T01:intron 40.0%
TGCTGTGTCTTACAAGCATA+GGG - contig567end:10181-10200 MsG0080048956.01.T01:exon 40.0%
TGTCATAAGAAACCAGCAGT+TGG - contig567end:12678-12697 MsG0080048956.01.T01:intron 40.0%
TTCCTGTAAACAGCCGTAAA+GGG + contig567end:12455-12474 MsG0080048956.01.T01:intergenic 40.0%
TTGCAGAGAAAGAACTCAAG+TGG + contig567end:12264-12283 MsG0080048956.01.T01:intergenic 40.0%
TTTCCTGTAAACAGCCGTAA+AGG + contig567end:12456-12475 MsG0080048956.01.T01:intergenic 40.0%
! CCAGAGAATTTGTCAAGTTG+GGG + contig567end:10311-10330 MsG0080048956.01.T01:intergenic 40.0%
! CTCTTTTTACATCCAACTGC+TGG + contig567end:12693-12712 MsG0080048956.01.T01:intergenic 40.0%
! GAGATTCTTTCTCTGGAAGT+TGG - contig567end:10508-10527 MsG0080048956.01.T01:intron 40.0%
! GAGCACTATCAGCTTTAACA+TGG - contig567end:11329-11348 MsG0080048956.01.T01:intron 40.0%
! GATAAAGCCACAAAGAGTAC+AGG - contig567end:12739-12758 MsG0080048956.01.T01:intron 40.0%
! GATTTAGGGTTAGGGTTAGA+GGG + contig567end:10263-10282 MsG0080048956.01.T01:intergenic 40.0%
! GTTGGAGTGTTAACTGAGAA+GGG - contig567end:10537-10556 MsG0080048956.01.T01:intron 40.0%
! TAACCCGGTTTTTACACAAG+AGG + contig567end:11543-11562 MsG0080048956.01.T01:intergenic 40.0%
! TAATTTTTACCACCACCACG+CGG + contig567end:12883-12902 MsG0080048956.01.T01:intergenic 40.0%
! TAGGAGGTTAGTTGGTATTC+TGG - contig567end:14420-14439 MsG0080048956.01.T01:exon 40.0%
! TCTCTGAAAACGGACATATC+AGG + contig567end:10212-10231 MsG0080048956.01.T01:intergenic 40.0%
! TGTTGGAGTGTTAACTGAGA+AGG - contig567end:10536-10555 MsG0080048956.01.T01:intron 40.0%
! TTAATTTTCTTCACGGGCAG+AGG - contig567end:13308-13327 MsG0080048956.01.T01:intron 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + contig567end:11532-11551 MsG0080048956.01.T01:intergenic 40.0%
! TTGGAGTGTTAACTGAGAAG+GGG - contig567end:10538-10557 MsG0080048956.01.T01:intron 40.0%
!! AAGTGGGCTAGTAAACAGTA+AGG + contig567end:13724-13743 MsG0080048956.01.T01:intergenic 40.0%
!! AGCTGACTTTTAGCCCTTTA+CGG - contig567end:12439-12458 MsG0080048956.01.T01:CDS 40.0%
!! AGGGGTTTGGTAATGGATTT+AGG + contig567end:10278-10297 MsG0080048956.01.T01:intergenic 40.0%
!! ATGGTATCAGAAAGGCATTG+AGG - contig567end:12210-12229 MsG0080048956.01.T01:intron 40.0%
!! CTCTTGCTTTTGAAGGGTAA+TGG - contig567end:10804-10823 MsG0080048956.01.T01:intron 40.0%
!! CTTTGTTATTTCAGGCGTCA+AGG - contig567end:11807-11826 MsG0080048956.01.T01:exon 40.0%
!! GGGGTTTGGTAATGGATTTA+GGG + contig567end:10277-10296 MsG0080048956.01.T01:intergenic 40.0%
!! TATGGCGTGCTCTGAAAAAA+TGG + contig567end:11390-11409 MsG0080048956.01.T01:intergenic 40.0%
!!! AAATTTGTTTTGTCGGCGAG+AGG + contig567end:12155-12174 MsG0080048956.01.T01:intergenic 40.0%
!!! AACCATGTTTTGGTCGTGAT+TGG + contig567end:13382-13401 MsG0080048956.01.T01:intergenic 40.0%
!!! AATTTGTTTTGTCGGCGAGA+GGG + contig567end:12154-12173 MsG0080048956.01.T01:intergenic 40.0%
!!! ATGTTTTGGTCGTGATTGGT+GGG + contig567end:13378-13397 MsG0080048956.01.T01:intergenic 40.0%
!!! GTGTTGCTCTTGTTTTACTG+TGG - contig567end:14453-14472 MsG0080048956.01.T01:exon 40.0%
!!! TGTTACTTTTCCTGCATTGC+TGG + contig567end:12310-12329 MsG0080048956.01.T01:intergenic 40.0%
ACTGTACGAACTGAGCTCAA+GGG - contig567end:11961-11980 MsG0080048956.01.T01:intron 45.0%
AGCAGGGGTTAAACATTGGT+TGG + contig567end:10345-10364 MsG0080048956.01.T01:intergenic 45.0%
AGGAACTGTCAAGAGAAGGA+AGG - contig567end:10663-10682 MsG0080048956.01.T01:intron 45.0%
AGGAGGCTCCAAGTAGAAAT+GGG - contig567end:13328-13347 MsG0080048956.01.T01:intron 45.0%
ATACATGTGCTTCCCATGCT+AGG - contig567end:11352-11371 MsG0080048956.01.T01:intron 45.0%
CACCAATCACGACCAAAACA+TGG - contig567end:13377-13396 MsG0080048956.01.T01:intron 45.0%
CAGGTGTGTTAAGCCTCTAA+TGG + contig567end:12601-12620 MsG0080048956.01.T01:intergenic 45.0%
CATCTTGCCTGTACTCTTTG+TGG + contig567end:12749-12768 MsG0080048956.01.T01:intergenic 45.0%
CCCCAACTTGACAAATTCTC+TGG - contig567end:10308-10327 MsG0080048956.01.T01:exon 45.0%
CCCTTCAATAGGAGGTTAGT+TGG - contig567end:14412-14431 MsG0080048956.01.T01:exon 45.0%
CGCCTACGATCTAAATCAAG+TGG + contig567end:13861-13880 MsG0080048956.01.T01:intergenic 45.0%
CTTCAATTCTACTGTCCGCA+AGG - contig567end:10701-10720 MsG0080048956.01.T01:intron 45.0%
GCAAACTCCGTAATCAACAG+AGG + contig567end:10877-10896 MsG0080048956.01.T01:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - contig567end:11567-11586 MsG0080048956.01.T01:intron 45.0%
GTATTGTACGCAACCTAACC+CGG + contig567end:11558-11577 MsG0080048956.01.T01:intergenic 45.0%
GTGTGGAATTGGACACTAGT+TGG - contig567end:11149-11168 MsG0080048956.01.T01:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - contig567end:11492-11511 MsG0080048956.01.T01:intron 45.0%
TCAGAGGAACTGTCAAGAGA+AGG - contig567end:10659-10678 MsG0080048956.01.T01:intron 45.0%
TCATCGTCATCAGCATCAAG+CGG + contig567end:10161-10180 MsG0080048956.01.T01:intergenic 45.0%
TTTAACCCCTGCTGAGCTTA+GGG - contig567end:10352-10371 MsG0080048956.01.T01:intron 45.0%
! ATGGGCACCTCTGTTGATTA+CGG - contig567end:10867-10886 MsG0080048956.01.T01:intron 45.0%
! GGATTTAGGGTTAGGGTTAG+AGG + contig567end:10264-10283 MsG0080048956.01.T01:intergenic 45.0%
! TTGAACGGCGTCTCTGAAAA+CGG + contig567end:10222-10241 MsG0080048956.01.T01:intergenic 45.0%
!! AGATTTGGTGCATGCTCCAA+CGG + contig567end:13668-13687 MsG0080048956.01.T01:intergenic 45.0%
!! GCATTTGTCCTGTCACTTTG+TGG - contig567end:11199-11218 MsG0080048956.01.T01:intron 45.0%
!! TTTGTCAAGTTGGGGATCGT+CGG + contig567end:10303-10322 MsG0080048956.01.T01:intergenic 45.0%
!!! CATGTTTTGGTCGTGATTGG+TGG + contig567end:13379-13398 MsG0080048956.01.T01:intergenic 45.0%
!!! GCTCTTGTTTTACTGTGGGA+GGG - contig567end:14458-14477 MsG0080048956.01.T01:exon 45.0%
!!! TGCTCTTGTTTTACTGTGGG+AGG - contig567end:14457-14476 MsG0080048956.01.T01:exon 45.0%
AAAGGCAGAGAGGCAAGGTT+TGG - contig567end:12714-12733 MsG0080048956.01.T01:intron 50.0%
ACAACAGCTTCACACTCGCA+AGG - contig567end:12327-12346 MsG0080048956.01.T01:intron 50.0%
ACAGATTCCCTAAGCTCAGC+AGG + contig567end:10362-10381 MsG0080048956.01.T01:intergenic 50.0%
AGAGTAAAGGCAGAGAGGCA+AGG - contig567end:12709-12728 MsG0080048956.01.T01:intron 50.0%
AGATTCCCTAAGCTCAGCAG+GGG + contig567end:10360-10379 MsG0080048956.01.T01:intergenic 50.0%
AGCCCTTTACGGCTGTTTAC+AGG - contig567end:12450-12469 MsG0080048956.01.T01:CDS 50.0%
AGGGTTAGGGTTAGAGGGTT+GGG + contig567end:10258-10277 MsG0080048956.01.T01:intergenic 50.0%
ATCAAGCGGAGAAGGAGAAG+CGG + contig567end:10147-10166 MsG0080048956.01.T01:intergenic 50.0%
CAACAGCTTCACACTCGCAA+GGG - contig567end:12328-12347 MsG0080048956.01.T01:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG + contig567end:11476-11495 MsG0080048956.01.T01:intergenic 50.0%
CACTGTACGAACTGAGCTCA+AGG - contig567end:11960-11979 MsG0080048956.01.T01:intron 50.0%
CAGATTCCCTAAGCTCAGCA+GGG + contig567end:10361-10380 MsG0080048956.01.T01:intergenic 50.0%
CAGTGTACAAGCCATCCCAT+CGG + contig567end:10913-10932 MsG0080048956.01.T01:intergenic 50.0%
CTCTGTCGTGAAGAGAAAGC+AGG + contig567end:10109-10128 MsG0080048956.01.T01:intergenic 50.0%
CTTGAGCTCAGTTCGTACAG+TGG + contig567end:11962-11981 MsG0080048956.01.T01:intergenic 50.0%
GAGGAGGCTCCAAGTAGAAA+TGG - contig567end:13327-13346 MsG0080048956.01.T01:intron 50.0%
GCAAAGGGAAAAGAGCCGAT+GGG - contig567end:10895-10914 MsG0080048956.01.T01:intron 50.0%
GCTCAGCAGGGGTTAAACAT+TGG + contig567end:10349-10368 MsG0080048956.01.T01:intergenic 50.0%
GGAATACCTTGGCATCCTTG+CGG + contig567end:10719-10738 MsG0080048956.01.T01:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - contig567end:11498-11517 MsG0080048956.01.T01:intron 50.0%
GTCGTCAAACCACGAAGATC+TGG - contig567end:10079-10098 MsG0080048956.01.T01:exon 50.0%
GTTTAACCCCTGCTGAGCTT+AGG - contig567end:10351-10370 MsG0080048956.01.T01:exon 50.0%
TAAATACTACCGCGTGGTGG+TGG - contig567end:12871-12890 MsG0080048956.01.T01:intron 50.0%
TACGAACTGAGCTCAAGGGA+GGG - contig567end:11965-11984 MsG0080048956.01.T01:intron 50.0%
TAGGGTTAGAGGGTTGGGTA+TGG + contig567end:10253-10272 MsG0080048956.01.T01:intergenic 50.0%
TAGGGTTAGGGTTAGAGGGT+TGG + contig567end:10259-10278 MsG0080048956.01.T01:intergenic 50.0%
TATGTTGGAGGCTTGGAGCT+AGG - contig567end:14368-14387 MsG0080048956.01.T01:exon 50.0%
TCATCAGCATCAAGCGGAGA+AGG + contig567end:10155-10174 MsG0080048956.01.T01:intergenic 50.0%
TCATGTGACTGGAAGGTCAC+GGG - contig567end:11499-11518 MsG0080048956.01.T01:intron 50.0%
TCTGGAAGTTGGGTCACTGT+TGG - contig567end:10519-10538 MsG0080048956.01.T01:intron 50.0%
TGCAAAGGGAAAAGAGCCGA+TGG - contig567end:10894-10913 MsG0080048956.01.T01:intron 50.0%
! ATTTTCTTCACGGGCAGAGG+AGG - contig567end:13311-13330 MsG0080048956.01.T01:intron 50.0%
! GCTCCAAGTAGAAATGGGCT+GGG - contig567end:13333-13352 MsG0080048956.01.T01:intron 50.0%
AAGTTGGGGATCGTCGGTGA+GGG + contig567end:10297-10316 MsG0080048956.01.T01:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + contig567end:11608-11627 MsG0080048956.01.T01:intergenic 55.0%
AGGGAAAAGAGCCGATGGGA+TGG - contig567end:10899-10918 MsG0080048956.01.T01:intron 55.0%
CCACCCAGCCCATTTCTACT+TGG + contig567end:13339-13358 MsG0080048956.01.T01:intergenic 55.0%
CTAAAGCTCCCGCATACGCA+GGG + contig567end:11607-11626 MsG0080048956.01.T01:intergenic 55.0%
GCAGGAGATCCAGATCTTCG+TGG + contig567end:10091-10110 MsG0080048956.01.T01:intergenic 55.0%
GGCTCCAAGTAGAAATGGGC+TGG - contig567end:13332-13351 MsG0080048956.01.T01:intron 55.0%
GTACGAACTGAGCTCAAGGG+AGG - contig567end:11964-11983 MsG0080048956.01.T01:intron 55.0%
TACTGTCCGCAAGGATGCCA+AGG - contig567end:10710-10729 MsG0080048956.01.T01:intron 55.0%
TCAAGCGGAGAAGGAGAAGC+GGG + contig567end:10146-10165 MsG0080048956.01.T01:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - contig567end:11612-11631 MsG0080048956.01.T01:intron 55.0%
! CGATGGGATGGCTTGTACAC+TGG - contig567end:10911-10930 MsG0080048956.01.T01:intron 55.0%
! GTCGGTGAGGGGTTTGGTAA+TGG + contig567end:10285-10304 MsG0080048956.01.T01:intergenic 55.0%
!! CCAAGTAGAAATGGGCTGGG+TGG - contig567end:13336-13355 MsG0080048956.01.T01:intron 55.0%
AAGGTCACGGGTTCAGGTCC+TGG - contig567end:11511-11530 MsG0080048956.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - contig567end:11465-11484 MsG0080048956.01.T01:intron 60.0%
AGTTGGGGATCGTCGGTGAG+GGG + contig567end:10296-10315 MsG0080048956.01.T01:intergenic 60.0%
GACTGGAAGGTCACGGGTTC+AGG - contig567end:11505-11524 MsG0080048956.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - contig567end:11580-11599 MsG0080048956.01.T01:intron 60.0%
! CAAGTTGGGGATCGTCGGTG+AGG + contig567end:10298-10317 MsG0080048956.01.T01:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - contig567end:11613-11632 MsG0080048956.01.T01:intron 60.0%
AGCGGAGAAGGAGAAGCGGG+AGG + contig567end:10143-10162 MsG0080048956.01.T01:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + contig567end:11595-11614 MsG0080048956.01.T01:intergenic 65.0%
CGGAGAAGGAGAAGCGGGAG+GGG + contig567end:10141-10160 MsG0080048956.01.T01:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + contig567end:11582-11601 MsG0080048956.01.T01:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - contig567end:11595-11614 MsG0080048956.01.T01:intron 65.0%
GCATACGCAGGGTCCGGGAA+GGG + contig567end:11596-11615 MsG0080048956.01.T01:intergenic 65.0%
GCGGAGAAGGAGAAGCGGGA+GGG + contig567end:10142-10161 MsG0080048956.01.T01:intergenic 65.0%
GGAGAAGCGGGAGGGGTTTC+AGG + contig567end:10134-10153 MsG0080048956.01.T01:intergenic 65.0%
GGGATCGTCGGTGAGGGGTT+TGG + contig567end:10291-10310 MsG0080048956.01.T01:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG - contig567end:11596-11615 MsG0080048956.01.T01:intron 65.0%
CGCATACGCAGGGTCCGGGA+AGG + contig567end:11597-11616 MsG0080048956.01.T01:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + contig567end:11601-11620 MsG0080048956.01.T01:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + contig567end:11602-11621 MsG0080048956.01.T01:intergenic 70.0%
Chromosome Type Strat End Strand Name
contig567end gene 10001 14621 10001 ID=MsG0080048956.01;
contig567end mRNA 10001 14621 10001 ID=MsG0080048956.01.T01;Parent=MsG0080048956.01
contig567end exon 10001 10370 10001 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end exon 11764 11977 11764 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 11815 11977 11815 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end CDS 12078 12150 12078 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 12078 12150 12078 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 12247 12311 12247 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 12247 12311 12247 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 12391 12534 12391 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 12391 12534 12391 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 12636 12682 12636 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 12636 12682 12636 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 12768 12801 12768 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 12768 12801 12768 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 13679 13803 13679 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 13679 13803 13679 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 13891 14128 13891 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 13891 14128 13891 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
contig567end CDS 14205 14545 14205 ID=MsG0080048956.01.T01.cds;Parent=MsG0080048956.01.T01
contig567end exon 14205 14621 14205 ID=MsG0080048956.01.T01.exon;Parent=MsG0080048956.01.T01
Gene Sequence

>MsG0080048956.01.T01

ATGTCGTCAAACCACGAAGATCTGGATCTCCTGCTTTCTCTTCACGACAGAGTTCCTGAAACCCCTCCCGCTTCTCCTTCTCCGCTTGATGCTGATGACGATGATGCTGTGTCTTACAAGCATAGGGAGAAACCTGATATGTCCGTTTTCAGAGACGCCGTTCAAGATTGTCTCCATACCCAACCCTCTAACCCTAACCCTAAATCCATTACCAAACCCCTCACCGACGATCCCCAACTTGACAAATTCTCTGGTCTTCGCATTACCAACCAATGTTTAACCCCTGCTGAGCTTAGGGAATCTGTTCAAGACATTCGTTTTGTTTGCCTACCCGTCATTAAGAATTTGGTGAATGGAGATTCTTTCTCTGGAAGTTGGGTCACTGTTGGAGTGTTAACTGAGAAGGGGATTCAGAAAACAAGTTCAAATGGGAAGAGCTATTGCATATGGAAAATTGGTTCTTTGGATGAAAATACTATTTCTCTTTTCTTGTTTGGTAATGCTTATCAGAGGAACTGTCAAGAGAAGGAAGGAACCGTCTTTGCACTCTTCAATTCTACTGTCCGCAAGGATGCCAAGGGTAATGGTTTTTCTTTGAGTATATACTCCCCTAACCAAATTATGAAGATGGGCACCTCTGTTGATTACGGAGTTTGCAAAGGGAAAAGAGCCGATGGGATGGCTTGTACACTGGCAATAAATAAGCGTCAAGGGACTTATTGTAAATATCATAAATCAAAAACATCAGAGAAATATTCCACTGTACGAACTGAGCTCAAGGGAGGAAACTTAAGAACAGCATTCAGGCCAAGAGATTATCTCAAGTCAGAAGGAATATACTTAGTTGACCCTCTCGCCGACAAAACAAATTTGAAGAAGTCTAAGCCAGTGAAATTGTTATCTGTGGATGGTATCAGAAAGGCATTGAGCAATGCAGGAAAAGTAACAACAGCTTCACACTCGCAAGGGATTAGATTTCTTTCTGAGATTGCAGGAAAATTTGATCCAAAAATGATGAAAAAAGAACCAAAGACTCCAAATGATCAAAGCAAATGCACAACGAAGAGGAAATCATCTTCTGTTAATATGGGATACTCTTCTGTCATAAGAAACCAGCAGTTGGATGTAAAAAGAGTAAAGGCAGAGAGGCAAGGTTTGGTTGATAAAGCCACAAAGAGTACAGGCAAGATGATTGAATTAGATCTTATTAGTTCGGACGAGGACTTCTGA
Protein sequence

>MsG0080048956.01.T01

MSSNHEDLDLLLSLHDRVPETPPASPSPLDADDDDAVSYKHREKPDMSVFRDAVQDCLHTQPSNPNPKSITKPLTDDPQLDKFSGLRITNQCLTPAELRESVQDIRFVCLPVIKNLVNGDSFSGSWVTVGVLTEKGIQKTSSNGKSYCIWKIGSLDENTISLFLFGNAYQRNCQEKEGTVFALFNSTVRKDAKGNGFSLSIYSPNQIMKMGTSVDYGVCKGKRADGMACTLAINKRQGTYCKYHKSKTSEKYSTVRTELKGGNLRTAFRPRDYLKSEGIYLVDPLADKTNLKKSKPVKLLSVDGIRKALSNAGKVTTASHSQGIRFLSEIAGKFDPKMMKKEPKTPNDQSKCTTKRKSSSVNMGYSSVIRNQQLDVKRVKAERQGLVDKATKSTGKMIELDLISSDEDF*