AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001145.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001145.01.T01 MTR_1g031910 96.976 496 14 1 1 495 1 496 0.0 991
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001145.01.T01 AT1G23230 62.205 508 165 8 1 504 1 485 0.0 613
MsG0180001145.01.T01 AT1G23230 62.525 499 160 8 1 495 1 476 0.0 605
MsG0180001145.01.T01 AT1G23230 62.525 499 160 8 1 495 1 476 0.0 605

Find 135 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCGTAATAATTCATAAA+AGG 0.197545 1:-16535702 None:intergenic
CTCTATTCAGAAGGGAAGTT+TGG 0.248471 1:+16536804 MsG0180001145.01.T01:CDS
CAGACAACACCTATTATTTC+AGG 0.259031 1:+16535878 MsG0180001145.01.T01:CDS
ATTGAATGAAAGCGTGAAAA+TGG 0.260457 1:+16532824 MsG0180001145.01.T01:exon
GCGGTATTGGGTGCATTAAC+TGG 0.280209 1:+16535099 MsG0180001145.01.T01:CDS
TGCTGAACTGGCTGGTGAAT+TGG 0.281696 1:+16535546 MsG0180001145.01.T01:CDS
CAGCATATGGTTGAAGATTT+CGG 0.285469 1:-16535528 None:intergenic
TAATAGGTGTTGTCTGATTC+AGG 0.316918 1:-16535871 None:intergenic
CATCTACATTGCCCTACATT+TGG 0.317457 1:+16535836 MsG0180001145.01.T01:CDS
CTATTGAAATTAACAAATTC+AGG 0.317771 1:+16537006 MsG0180001145.01.T01:CDS
TACGGAGCTTGTGCGGTATT+GGG 0.320918 1:+16535087 MsG0180001145.01.T01:CDS
AGCATTATTTACACTTATCT+TGG 0.336956 1:+16535760 MsG0180001145.01.T01:CDS
GAATTAGCAATTGTGCTTGC+CGG 0.342254 1:-16535242 None:intergenic
TTGACTTCTGTCCATACTAT+TGG 0.345476 1:+16535296 MsG0180001145.01.T01:CDS
TTACGGAGCTTGTGCGGTAT+TGG 0.363197 1:+16535086 MsG0180001145.01.T01:CDS
GAATTGGGACCAGGGACAAC+AGG 0.364032 1:+16535562 MsG0180001145.01.T01:CDS
TGGTTTCTGGGTTTAAGCTT+TGG 0.371899 1:-16532793 None:intergenic
ATCTCATATTTAAGTGTCCT+TGG 0.376457 1:+16535932 MsG0180001145.01.T01:CDS
GTAAATAATGCTTCATCATC+AGG 0.376613 1:-16535749 None:intergenic
ATCTACATTGCCCTACATTT+GGG 0.379558 1:+16535837 MsG0180001145.01.T01:CDS
TGGAGTGTTGTAGCGGAAGC+TGG 0.392032 1:-16532773 None:intergenic
TGGTTCGCGGATTGTGTCAT+CGG 0.396967 1:-16533067 None:intergenic
GCTGAACTGGCTGGTGAATT+GGG 0.401652 1:+16535547 MsG0180001145.01.T01:CDS
TCTCATATTTAAGTGTCCTT+GGG 0.410005 1:+16535933 MsG0180001145.01.T01:CDS
GCGGTAGGCCCTTGAGTTGA+AGG 0.410729 1:-16536925 None:intergenic
GTGCAGGGGAGCCAATAGTA+TGG 0.413309 1:-16535307 None:intergenic
TCACCAGCCAGTTCAGCATA+TGG 0.415275 1:-16535541 None:intergenic
TCTTCAACCATATGCTGAAC+TGG 0.423141 1:+16535534 MsG0180001145.01.T01:CDS
GCTAGACTCGTTTGACCAAC+CGG 0.423830 1:-16535170 None:intergenic
TCATCTGATATTTCCTCGGC+TGG 0.428031 1:+16535377 MsG0180001145.01.T01:CDS
TAGTTCTACGATTCTATCAA+TGG 0.430450 1:-16536986 None:intergenic
TCAACAATGAATTGCTCATT+CGG 0.435161 1:-16533256 None:intergenic
TAACTGGGACACCTTTCTTC+CGG 0.439863 1:+16535115 MsG0180001145.01.T01:CDS
ATAGTTGCTTGGATGTGATC+TGG 0.441845 1:+16535648 MsG0180001145.01.T01:CDS
GTCGTACAGTGTAGTGGTCA+TGG 0.447369 1:+16535035 MsG0180001145.01.T01:CDS
AGTTTCTTCAGCAGAAATTC+CGG 0.451123 1:+16535151 MsG0180001145.01.T01:CDS
CATCAACTCCCTGTTGTCCC+TGG 0.455438 1:-16535571 None:intergenic
TTAAATATGAGATCGGTGAT+AGG 0.461484 1:-16535922 None:intergenic
ATATCATTATTTCTAACAGA+TGG 0.462248 1:-16535425 None:intergenic
CACTTATCTTGGAGATCCAC+AGG 0.462866 1:+16535771 MsG0180001145.01.T01:CDS
ACTATGTAGCCATGCAACTA+AGG 0.466878 1:-16535630 None:intergenic
CTGCGTAATAATTCATAAAA+GGG 0.467357 1:-16535701 None:intergenic
AGTGAACTTACGGTGGTTCG+CGG 0.470011 1:-16533080 None:intergenic
GTGGAGACGGGTATTGGTAC+TGG 0.470334 1:+16536888 MsG0180001145.01.T01:CDS
TGATTGGTGGAGACGGGTAT+TGG 0.473708 1:+16536882 MsG0180001145.01.T01:CDS
TGGTACTGGCTTCTCCCTAC+AGG 0.474632 1:+16536902 MsG0180001145.01.T01:CDS
AAATAATCTTGCAACATAGC+TGG 0.477788 1:-16535466 None:intergenic
CTGGCTGGTGAATTGGGACC+AGG 0.478314 1:+16535553 MsG0180001145.01.T01:CDS
AATACCCGTCTCCACCAATC+AGG 0.483719 1:-16536880 None:intergenic
AGAGAGCTGTACGTTGCATC+CGG 0.491485 1:+16536833 MsG0180001145.01.T01:CDS
TTCAGAAGGGAAGTTTGGAC+TGG 0.493491 1:+16536809 MsG0180001145.01.T01:CDS
TTCAACCTCTACTTAGGACT+TGG 0.494614 1:+16532939 MsG0180001145.01.T01:CDS
CATGCAACTAAGGATTTGTC+AGG 0.495591 1:-16535620 None:intergenic
GCACTACACCTTCACCTGAT+TGG 0.497484 1:+16536866 MsG0180001145.01.T01:CDS
GGTTCGCGGATTGTGTCATC+GGG 0.499260 1:-16533066 None:intergenic
AAGATTTCGGCATATGTCAC+GGG 0.499977 1:-16535515 None:intergenic
TCCTCTAGCTTATCACAGTC+GGG 0.500394 1:+16535209 MsG0180001145.01.T01:CDS
AGGTTGAAGAGATCGAGAAT+TGG 0.502064 1:-16532924 None:intergenic
TCGAGAATTGGAACACGCGC+TGG 0.503782 1:-16532912 None:intergenic
CCCTACAGGCCTTCAACTCA+AGG 0.507514 1:+16536916 MsG0180001145.01.T01:CDS
GATCTCTTCAACCTCTACTT+AGG 0.515335 1:+16532933 MsG0180001145.01.T01:CDS
TTCACCTGATTGGTGGAGAC+GGG 0.520606 1:+16536876 MsG0180001145.01.T01:CDS
CCACAGGAGACGAGATATGA+TGG 0.522092 1:+16535787 MsG0180001145.01.T01:CDS
AGAAACAAGGGCCGGAAGAA+AGG 0.522367 1:-16535126 None:intergenic
GCCCTACATTTGGGACTCAT+CGG 0.523737 1:+16535846 MsG0180001145.01.T01:CDS
CCTTGAGTTGAAGGCCTGTA+GGG 0.524688 1:-16536916 None:intergenic
GGCTCAATAGATGACTGTGC+AGG 0.527156 1:-16535323 None:intergenic
CTCCTCTAGCTTATCACAGT+CGG 0.527889 1:+16535208 MsG0180001145.01.T01:CDS
TCCGATGAGTCCCAAATGTA+GGG 0.530554 1:-16535847 None:intergenic
GGAGTGTTGTAGCGGAAGCT+GGG 0.533143 1:-16532772 None:intergenic
TCAACTCAAGGGCCTACCGC+TGG 0.534144 1:+16536928 MsG0180001145.01.T01:CDS
CAACCATATGCTGAACTGGC+TGG 0.537291 1:+16535538 MsG0180001145.01.T01:CDS
GAAGATTTCGGCATATGTCA+CGG 0.542377 1:-16535516 None:intergenic
TATCATTATTTCTAACAGAT+GGG 0.543733 1:-16535424 None:intergenic
CTGAAGAAACTGAAGAAACA+AGG 0.543767 1:-16535139 None:intergenic
ACAGTCGGGAATGCTGCCTC+CGG 0.545120 1:+16535223 MsG0180001145.01.T01:CDS
AGTTGATGAGGGAAAATGCC+GGG 0.546946 1:+16535676 MsG0180001145.01.T01:CDS
TGCATGGCTACATAGTTGCT+TGG 0.551203 1:+16535637 MsG0180001145.01.T01:CDS
ACAGAAGTCAATGGAGATGC+GGG 0.555309 1:-16535284 None:intergenic
CTTCACCTGATTGGTGGAGA+CGG 0.555583 1:+16536875 MsG0180001145.01.T01:CDS
ATGTAGGGCAATGTAGATGC+TGG 0.557196 1:-16535832 None:intergenic
CTACACCTTCACCTGATTGG+TGG 0.560395 1:+16536869 MsG0180001145.01.T01:CDS
AGTGTAGTGGTCATGGGCCA+CGG 0.561886 1:+16535042 MsG0180001145.01.T01:CDS
AGAAGCTATTCTTATACCGC+TGG 0.562263 1:+16535013 MsG0180001145.01.T01:CDS
AAAATCATCTGATATTTCCT+CGG 0.563815 1:+16535373 MsG0180001145.01.T01:CDS
ATCCGATGAGTCCCAAATGT+AGG 0.564551 1:-16535848 None:intergenic
TCGTACAGTGTAGTGGTCAT+GGG 0.568388 1:+16535036 MsG0180001145.01.T01:CDS
TATTGCAATCTCTATTCAGA+AGG 0.569377 1:+16536795 MsG0180001145.01.T01:CDS
ATGAATTGCTCATTCGGTGG+CGG 0.570741 1:-16533250 None:intergenic
GCTCAATAGATGACTGTGCA+GGG 0.574014 1:-16535322 None:intergenic
CCCTTGAGTTGAAGGCCTGT+AGG 0.574313 1:-16536917 None:intergenic
CGGTATTGGGTGCATTAACT+GGG 0.575299 1:+16535100 MsG0180001145.01.T01:CDS
TCACGGAACGCAATTGCTCA+TGG 0.575566 1:-16534989 None:intergenic
TTTAGACTGTTGTCCAGCCG+AGG 0.579695 1:-16535390 None:intergenic
ATAGTATGGACAGAAGTCAA+TGG 0.580734 1:-16535293 None:intergenic
GACAGAAGTCAATGGAGATG+CGG 0.591142 1:-16535285 None:intergenic
TCAGAAGGGAAGTTTGGACT+GGG 0.592081 1:+16536810 MsG0180001145.01.T01:CDS
GTGTAGTGCGGAGAGCATGC+CGG 0.593195 1:-16536852 None:intergenic
TTTCAAACTGAACTCAAGAC+CGG 0.596602 1:-16535492 None:intergenic
CCATCATATCTCGTCTCCTG+TGG 0.601245 1:-16535787 None:intergenic
CGAGAATTGGAACACGCGCT+GGG 0.605840 1:-16532911 None:intergenic
CTCATATTTAAGTGTCCTTG+GGG 0.606099 1:+16535934 MsG0180001145.01.T01:CDS
GTCCTTGGGGAACCATTGAA+CGG 0.607015 1:+16535947 MsG0180001145.01.T01:CDS
AGGACACTTAAATATGAGAT+CGG 0.612191 1:-16535929 None:intergenic
TTAGCAATTGTGCTTGCCGG+AGG 0.612357 1:-16535239 None:intergenic
GAAACTGAAGAAACAAGGGC+CGG 0.612497 1:-16535134 None:intergenic
CTGACAAATCCTTAGTTGCA+TGG 0.613277 1:+16535621 MsG0180001145.01.T01:CDS
GAATTGGAACACGCGCTGGG+TGG 0.614892 1:-16532908 None:intergenic
TCTTCAGCAGAAATTCCGGT+TGG 0.616804 1:+16535155 MsG0180001145.01.T01:CDS
AATTGGGACCAGGGACAACA+GGG 0.618117 1:+16535563 MsG0180001145.01.T01:CDS
CTCCGTTCAATGGTTCCCCA+AGG 0.621258 1:-16535949 None:intergenic
TCTTGCAACATAGCTGGCGA+AGG 0.621503 1:-16535460 None:intergenic
CCGCTGGTCGTACAGTGTAG+TGG 0.622017 1:+16535029 MsG0180001145.01.T01:CDS
ATAATTCATAAAAGGGAACC+CGG 0.623751 1:-16535694 None:intergenic
TTACTCCAAGTCCTAAGTAG+AGG 0.629125 1:-16532944 None:intergenic
CGTCTCCACCAATCAGGTGA+AGG 0.629710 1:-16536874 None:intergenic
TAGTTGATGAGGGAAAATGC+CGG 0.636355 1:+16535675 MsG0180001145.01.T01:CDS
TAAGCTTTGGAGTGTTGTAG+CGG 0.643097 1:-16532780 None:intergenic
TCAAGTTCACTGTATCGCAT+CGG 0.644163 1:-16532738 None:intergenic
TCCCGACTGTGATAAGCTAG+AGG 0.649251 1:-16535210 None:intergenic
TGAAGAAACTGAAGAAACAA+GGG 0.652367 1:-16535138 None:intergenic
ATTGCAATCTCTATTCAGAA+GGG 0.652631 1:+16536796 MsG0180001145.01.T01:CDS
TATAAGAATAGCTTCTGTCA+CGG 0.654080 1:-16535006 None:intergenic
TGGCTGGTGAATTGGGACCA+GGG 0.656718 1:+16535554 MsG0180001145.01.T01:CDS
ACAATGAATTGCTCATTCGG+TGG 0.658730 1:-16533253 None:intergenic
CCTACAGGCCTTCAACTCAA+GGG 0.661794 1:+16536917 MsG0180001145.01.T01:CDS
CTCAATAGATGACTGTGCAG+GGG 0.662614 1:-16535321 None:intergenic
GGACAACAGTCTAAACAAAG+AGG 0.668121 1:+16535398 MsG0180001145.01.T01:CDS
CGACTGTGATAAGCTAGAGG+AGG 0.678629 1:-16535207 None:intergenic
AATCAGGTGAAGGTGTAGTG+CGG 0.682060 1:-16536864 None:intergenic
CCACTACACTGTACGACCAG+CGG 0.683644 1:-16535029 None:intergenic
GATAGAGCTGCACAAGACAA+CGG 0.684011 1:-16535344 None:intergenic
TTCTACGGAGATGATCTGTG+AGG 0.702947 1:+16536960 MsG0180001145.01.T01:CDS
AAAAGCAGAAAGTCTGACCG+TGG 0.705810 1:-16535059 None:intergenic
TGGGGAACCATTGAACGGAG+AGG 0.716670 1:+16535952 MsG0180001145.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAATATTATATGAATTAA+AGG + Chr1:16534370-16534389 MsG0180001145.01.T01:intron 10.0%
!! TTATTAATAGTTTATTTATG+TGG + Chr1:16536293-16536312 MsG0180001145.01.T01:intron 10.0%
!! TTTCAAAATATTAATGATTT+AGG - Chr1:16534724-16534743 None:intergenic 10.0%
!!! TTATTAAAATAAAAAGTGTT+TGG + Chr1:16534069-16534088 MsG0180001145.01.T01:intron 10.0%
!! AAATATAAATTGACGTAAAA+GGG + Chr1:16534117-16534136 MsG0180001145.01.T01:intron 15.0%
!! ATTAAACTGTTTATTTAAGT+AGG + Chr1:16533875-16533894 MsG0180001145.01.T01:intron 15.0%
!! TAAATATAAATTGACGTAAA+AGG + Chr1:16534116-16534135 MsG0180001145.01.T01:intron 15.0%
!! TAAATTAACAAGGTTAAAAT+TGG + Chr1:16534522-16534541 MsG0180001145.01.T01:intron 15.0%
!! TTAAACTGTTTATTTAAGTA+GGG + Chr1:16533876-16533895 MsG0180001145.01.T01:intron 15.0%
!!! ATATTTTAGAGAATTTGTTT+AGG + Chr1:16533148-16533167 MsG0180001145.01.T01:intron 15.0%
!!! TATTTTAGAGAATTTGTTTA+GGG + Chr1:16533149-16533168 MsG0180001145.01.T01:intron 15.0%
!! AATCATATTTAATGCATGTT+CGG + Chr1:16534750-16534769 MsG0180001145.01.T01:intron 20.0%
!! AATCTGATATTCAAAAAACA+TGG + Chr1:16535594-16535613 MsG0180001145.01.T01:CDS 20.0%
!! ATAATAGTTGACATTCAAAT+TGG - Chr1:16536652-16536671 None:intergenic 20.0%
!! CATAAGATAAAAACAATTCA+TGG - Chr1:16533764-16533783 None:intergenic 20.0%
!! CTATTGAAATTAACAAATTC+AGG + Chr1:16537006-16537025 MsG0180001145.01.T01:CDS 20.0%
!! CTTATCTACTATATATTGTT+TGG + Chr1:16533436-16533455 MsG0180001145.01.T01:intron 20.0%
!! GTTGTATTTGTTTATGTTAA+CGG + Chr1:16534948-16534967 MsG0180001145.01.T01:intron 20.0%
!! TATACATATTGTTATGTAAG+TGG - Chr1:16536433-16536452 None:intergenic 20.0%
!! TATTATATGAATTAAAGGGA+AGG + Chr1:16534375-16534394 MsG0180001145.01.T01:intron 20.0%
!!! ATATCATTATTTCTAACAGA+TGG - Chr1:16535428-16535447 None:intergenic 20.0%
!!! ATCTATATGATTGATTCTAA+TGG + Chr1:16536558-16536577 MsG0180001145.01.T01:intron 20.0%
!!! TATCATTATTTCTAACAGAT+GGG - Chr1:16535427-16535446 None:intergenic 20.0%
!!! TATCTACTGTCATAATTTTT+TGG + Chr1:16533476-16533495 MsG0180001145.01.T01:intron 20.0%
!!! TTTTAACAAGAGATGAAAAA+GGG - Chr1:16536083-16536102 None:intergenic 20.0%
!!! TTTTGTGAATTTTTGATTTC+AGG + Chr1:16533185-16533204 MsG0180001145.01.T01:intron 20.0%
!!! TTTTTAACAAGAGATGAAAA+AGG - Chr1:16536084-16536103 None:intergenic 20.0%
! AAAATCATCTGATATTTCCT+CGG + Chr1:16535373-16535392 MsG0180001145.01.T01:CDS 25.0%
! AAGAAACGAAAACAAAATGA+GGG - Chr1:16533025-16533044 None:intergenic 25.0%
! ACTGCGTAATAATTCATAAA+AGG - Chr1:16535705-16535724 None:intergenic 25.0%
! AGCATTATTTACACTTATCT+TGG + Chr1:16535760-16535779 MsG0180001145.01.T01:CDS 25.0%
! CTATACAGATAGAATATTAG+TGG + Chr1:16536486-16536505 MsG0180001145.01.T01:intron 25.0%
! CTGCGTAATAATTCATAAAA+GGG - Chr1:16535704-16535723 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + Chr1:16533698-16533717 MsG0180001145.01.T01:intron 25.0%
!! CTTTCATTCAATTTTCGTTT+TGG - Chr1:16532816-16532835 None:intergenic 25.0%
!! GAAATATCAGATGATTTTAC+AGG - Chr1:16535371-16535390 None:intergenic 25.0%
!! TTTTCTTCACCTGAAATAAT+AGG - Chr1:16535890-16535909 None:intergenic 25.0%
!!! AAAGATGGAATTGTTGATTT+AGG + Chr1:16533388-16533407 MsG0180001145.01.T01:intron 25.0%
!!! AAGATGGAATTGTTGATTTA+GGG + Chr1:16533389-16533408 MsG0180001145.01.T01:intron 25.0%
!!! ACTTTCTGCTTTTTGTTTTA+CGG + Chr1:16535069-16535088 MsG0180001145.01.T01:CDS 25.0%
!!! TGTTGCAAGATTATTTTAAC+CGG + Chr1:16535473-16535492 MsG0180001145.01.T01:CDS 25.0%
AAAACTGTAGTTGTAGACTA+AGG + Chr1:16533910-16533929 MsG0180001145.01.T01:intron 30.0%
AAACTGTAGTTGTAGACTAA+GGG + Chr1:16533911-16533930 MsG0180001145.01.T01:intron 30.0%
AAATAATCTTGCAACATAGC+TGG - Chr1:16535469-16535488 None:intergenic 30.0%
AATATCGAGGAAAGAAAATG+CGG - Chr1:16532995-16533014 None:intergenic 30.0%
ACGTCAAATAAAAAGTTGAC+TGG + Chr1:16536216-16536235 MsG0180001145.01.T01:intron 30.0%
AGAATAAGACTGCAGAATAT+TGG - Chr1:16536694-16536713 None:intergenic 30.0%
AGGACACTTAAATATGAGAT+CGG - Chr1:16535932-16535951 None:intergenic 30.0%
ATAATTCATAAAAGGGAACC+CGG - Chr1:16535697-16535716 None:intergenic 30.0%
ATCTCATATTTAAGTGTCCT+TGG + Chr1:16535932-16535951 MsG0180001145.01.T01:CDS 30.0%
ATTGCAATCTCTATTCAGAA+GGG + Chr1:16536796-16536815 MsG0180001145.01.T01:CDS 30.0%
CATAGCAAAAATCTTAGTAC+AGG - Chr1:16536140-16536159 None:intergenic 30.0%
GAAGAAACGAAAACAAAATG+AGG - Chr1:16533026-16533045 None:intergenic 30.0%
GTAAATAATGCTTCATCATC+AGG - Chr1:16535752-16535771 None:intergenic 30.0%
TATAAGAATAGCTTCTGTCA+CGG - Chr1:16535009-16535028 None:intergenic 30.0%
TATCCAAACAGGAACTATTT+AGG + Chr1:16533709-16533728 MsG0180001145.01.T01:intron 30.0%
TATTGCAATCTCTATTCAGA+AGG + Chr1:16536795-16536814 MsG0180001145.01.T01:CDS 30.0%
TCAACAATGAATTGCTCATT+CGG - Chr1:16533259-16533278 None:intergenic 30.0%
TCACTGTTTATTTCATGTAG+AGG + Chr1:16536581-16536600 MsG0180001145.01.T01:intron 30.0%
TCTCATATTTAAGTGTCCTT+GGG + Chr1:16535933-16535952 MsG0180001145.01.T01:CDS 30.0%
TCTGAACAGATACATCAAAT+GGG - Chr1:16536319-16536338 None:intergenic 30.0%
TGAAGAAACTGAAGAAACAA+GGG - Chr1:16535141-16535160 None:intergenic 30.0%
TTAAATATGAGATCGGTGAT+AGG - Chr1:16535925-16535944 None:intergenic 30.0%
TTAATGATTTAGGCTGTGTT+TGG - Chr1:16534714-16534733 None:intergenic 30.0%
TTCTATCTGTATAGTAGATC+TGG - Chr1:16536480-16536499 None:intergenic 30.0%
TTCTGAACAGATACATCAAA+TGG - Chr1:16536320-16536339 None:intergenic 30.0%
! ACTGGAAAGTTGTTTAAAGT+AGG + Chr1:16536234-16536253 MsG0180001145.01.T01:intron 30.0%
! ATTGAATGAAAGCGTGAAAA+TGG + Chr1:16532824-16532843 MsG0180001145.01.T01:exon 30.0%
! CTGGAAAGTTGTTTAAAGTA+GGG + Chr1:16536235-16536254 MsG0180001145.01.T01:intron 30.0%
! GAACTATTTAGGACAACTTA+TGG + Chr1:16533720-16533739 MsG0180001145.01.T01:intron 30.0%
! GAATTAGCTTATAAGCTTGT+TGG - Chr1:16534661-16534680 None:intergenic 30.0%
! TAGTTCTACGATTCTATCAA+TGG - Chr1:16536989-16537008 None:intergenic 30.0%
!! AGATTTTTGCTATGAAAGTG+AGG + Chr1:16536146-16536165 MsG0180001145.01.T01:intron 30.0%
!! TAACGGTGCATTTTAATATC+AGG + Chr1:16534965-16534984 MsG0180001145.01.T01:intron 30.0%
!! TTTTATTTGACGTGTTGTGA+AGG - Chr1:16536209-16536228 None:intergenic 30.0%
!!! AGGTAGTGTTGATTTTAAGA+CGG - Chr1:16536120-16536139 None:intergenic 30.0%
!!! CAATTTTCGTTTTGGTTTCT+GGG - Chr1:16532808-16532827 None:intergenic 30.0%
!!! CGTGAATCGTTTTTTGTTTT+TGG + Chr1:16533121-16533140 MsG0180001145.01.T01:intron 30.0%
!!! GTTTTTTCTTCCTCGAATTA+CGG + Chr1:16533311-16533330 MsG0180001145.01.T01:intron 30.0%
!!! TCAATTTTCGTTTTGGTTTC+TGG - Chr1:16532809-16532828 None:intergenic 30.0%
AGGAGAGATTGGAAAAATCA+TGG - Chr1:16534865-16534884 None:intergenic 35.0%
AGTTTCTTCAGCAGAAATTC+CGG + Chr1:16535151-16535170 MsG0180001145.01.T01:CDS 35.0%
ATAGTATGGACAGAAGTCAA+TGG - Chr1:16535296-16535315 None:intergenic 35.0%
ATCAACAATTCCATCTTTGC+AGG - Chr1:16533386-16533405 None:intergenic 35.0%
ATCTACATTGCCCTACATTT+GGG + Chr1:16535837-16535856 MsG0180001145.01.T01:CDS 35.0%
ATGACCACTAAGTGAATGTT+TGG - Chr1:16534898-16534917 None:intergenic 35.0%
ATGTATATAAGCTGTGAGTG+TGG + Chr1:16534435-16534454 MsG0180001145.01.T01:intron 35.0%
CAAACCAAACATTCACTTAG+TGG + Chr1:16534891-16534910 MsG0180001145.01.T01:intron 35.0%
CAGACAACACCTATTATTTC+AGG + Chr1:16535878-16535897 MsG0180001145.01.T01:CDS 35.0%
CAGATAGAATATTAGTGGCA+TGG + Chr1:16536491-16536510 MsG0180001145.01.T01:intron 35.0%
CAGCATATGGTTGAAGATTT+CGG - Chr1:16535531-16535550 None:intergenic 35.0%
CATTGTTGTGAGTGAACTTA+CGG - Chr1:16533093-16533112 None:intergenic 35.0%
CTCATATTTAAGTGTCCTTG+GGG + Chr1:16535934-16535953 MsG0180001145.01.T01:CDS 35.0%
CTGAAGAAACTGAAGAAACA+AGG - Chr1:16535142-16535161 None:intergenic 35.0%
TGTCCTAAATAGTTCCTGTT+TGG - Chr1:16533715-16533734 None:intergenic 35.0%
TTGACTTCTGTCCATACTAT+TGG + Chr1:16535296-16535315 MsG0180001145.01.T01:CDS 35.0%
TTTCAAACTGAACTCAAGAC+CGG - Chr1:16535495-16535514 None:intergenic 35.0%
TTTGTAGCCTCACAAAATCA+CGG - Chr1:16534810-16534829 None:intergenic 35.0%
! TAATAGGTGTTGTCTGATTC+AGG - Chr1:16535874-16535893 None:intergenic 35.0%
!! GAATGTTTGGTTTGCATAAG+AGG - Chr1:16534885-16534904 None:intergenic 35.0%
!! GCAGTCTTATTCTATCTTGT+TGG + Chr1:16536701-16536720 MsG0180001145.01.T01:intron 35.0%
!! TTGTTGATTTAGGGCATGTT+TGG + Chr1:16533398-16533417 MsG0180001145.01.T01:intron 35.0%
!!! ATCTGGCTTTTAGTTGATGA+GGG + Chr1:16535665-16535684 MsG0180001145.01.T01:CDS 35.0%
!!! TTTTTTACCTCTCCGTTCAA+TGG - Chr1:16535962-16535981 None:intergenic 35.0%
AAGATTTCGGCATATGTCAC+GGG - Chr1:16535518-16535537 None:intergenic 40.0%
AAGCGAAAATCCGTAATTCG+AGG - Chr1:16533324-16533343 None:intergenic 40.0%
AAGTAACCACTTGATCAACC+AGG + Chr1:16536183-16536202 MsG0180001145.01.T01:intron 40.0%
ACAATGAATTGCTCATTCGG+TGG - Chr1:16533256-16533275 None:intergenic 40.0%
ACTATGTAGCCATGCAACTA+AGG - Chr1:16535633-16535652 None:intergenic 40.0%
AGAAGCTATTCTTATACCGC+TGG + Chr1:16535013-16535032 MsG0180001145.01.T01:CDS 40.0%
AGGTTGAAGAGATCGAGAAT+TGG - Chr1:16532927-16532946 None:intergenic 40.0%
AGTGTCTTGATGTTGTCTGT+AGG + Chr1:16536771-16536790 MsG0180001145.01.T01:intron 40.0%
ATAGTTGCTTGGATGTGATC+TGG + Chr1:16535648-16535667 MsG0180001145.01.T01:CDS 40.0%
ATATAAGCTGTGAGTGTGGT+TGG + Chr1:16534439-16534458 MsG0180001145.01.T01:intron 40.0%
ATGCGGAGAAAGAAAGAGAA+TGG - Chr1:16532978-16532997 None:intergenic 40.0%
CATCTACATTGCCCTACATT+TGG + Chr1:16535836-16535855 MsG0180001145.01.T01:CDS 40.0%
CATGCAACTAAGGATTTGTC+AGG - Chr1:16535623-16535642 None:intergenic 40.0%
CCACTGTCATAATGTATGCT+CGG + Chr1:16533517-16533536 MsG0180001145.01.T01:intron 40.0%
CTCTATTCAGAAGGGAAGTT+TGG + Chr1:16536804-16536823 MsG0180001145.01.T01:CDS 40.0%
CTGACAAATCCTTAGTTGCA+TGG + Chr1:16535621-16535640 MsG0180001145.01.T01:CDS 40.0%
GAAGATTTCGGCATATGTCA+CGG - Chr1:16535519-16535538 None:intergenic 40.0%
GAATTAGCAATTGTGCTTGC+CGG - Chr1:16535245-16535264 None:intergenic 40.0%
GATCTCTTCAACCTCTACTT+AGG + Chr1:16532933-16532952 MsG0180001145.01.T01:CDS 40.0%
GCTATGAAAGTGAGGCAAAA+TGG + Chr1:16536154-16536173 MsG0180001145.01.T01:intron 40.0%
GGACAACAGTCTAAACAAAG+AGG + Chr1:16535398-16535417 MsG0180001145.01.T01:CDS 40.0%
GGATCAAAATGTGACGTGTT+TGG - Chr1:16534640-16534659 None:intergenic 40.0%
GTATACATGTACCGTGTTTC+TGG + Chr1:16536448-16536467 MsG0180001145.01.T01:intron 40.0%
GTTATAAGCTAGCTGATAGC+TGG + Chr1:16533952-16533971 MsG0180001145.01.T01:intron 40.0%
GTTTGCATAAGAGGAGAGAT+TGG - Chr1:16534876-16534895 None:intergenic 40.0%
TATAGCTGATGACTGATAGC+TGG + Chr1:16534023-16534042 MsG0180001145.01.T01:intron 40.0%
TCGAGGAAGAAAAAACTCAC+AGG - Chr1:16533307-16533326 None:intergenic 40.0%
TCTAGTTACCCTGTTTGCTT+CGG + Chr1:16536369-16536388 MsG0180001145.01.T01:intron 40.0%
TCTGGAAAAAGCCAGAAACA+CGG - Chr1:16536462-16536481 None:intergenic 40.0%
TCTTCAACCATATGCTGAAC+TGG + Chr1:16535534-16535553 MsG0180001145.01.T01:CDS 40.0%
TGACATAAGCACTTGTGAGA+CGG + Chr1:16533564-16533583 MsG0180001145.01.T01:intron 40.0%
TGAGACTGTACTTGAATGCT+CGG + Chr1:16536018-16536037 MsG0180001145.01.T01:intron 40.0%
TGAGGGAGATGAAAATATCG+AGG - Chr1:16533008-16533027 None:intergenic 40.0%
TGGTTGATCAAGTGGTTACT+TGG - Chr1:16536184-16536203 None:intergenic 40.0%
TTAATGCATGTTCGGATGAC+TGG + Chr1:16534758-16534777 MsG0180001145.01.T01:intron 40.0%
TTACTCCAAGTCCTAAGTAG+AGG - Chr1:16532947-16532966 None:intergenic 40.0%
TTCAACCTCTACTTAGGACT+TGG + Chr1:16532939-16532958 MsG0180001145.01.T01:CDS 40.0%
! TGGTTTCTGGGTTTAAGCTT+TGG - Chr1:16532796-16532815 None:intergenic 40.0%
! TTGTAGACTAAGGGTGTGTT+TGG + Chr1:16533920-16533939 MsG0180001145.01.T01:intron 40.0%
!! TAAGCTTTGGAGTGTTGTAG+CGG - Chr1:16532783-16532802 None:intergenic 40.0%
!! TAGTTGATGAGGGAAAATGC+CGG + Chr1:16535675-16535694 MsG0180001145.01.T01:CDS 40.0%
!!! GATCTGGCTTTTAGTTGATG+AGG + Chr1:16535664-16535683 MsG0180001145.01.T01:CDS 40.0%
!!! TTTGTTTTACGGAGCTTGTG+CGG + Chr1:16535080-16535099 MsG0180001145.01.T01:CDS 40.0%
AAAAGCAGAAAGTCTGACCG+TGG - Chr1:16535062-16535081 None:intergenic 45.0%
AAGCACTTGTGAGACGGTTT+GGG + Chr1:16533570-16533589 MsG0180001145.01.T01:intron 45.0%
ACAGAAGTCAATGGAGATGC+GGG - Chr1:16535287-16535306 None:intergenic 45.0%
ATCCGATGAGTCCCAAATGT+AGG - Chr1:16535851-16535870 None:intergenic 45.0%
ATGTAGGGCAATGTAGATGC+TGG - Chr1:16535835-16535854 None:intergenic 45.0%
CACTTATCTTGGAGATCCAC+AGG + Chr1:16535771-16535790 MsG0180001145.01.T01:CDS 45.0%
CCGAGCATACATTATGACAG+TGG - Chr1:16533520-16533539 None:intergenic 45.0%
CGTAGAAAAAACAGCACCAG+CGG - Chr1:16536947-16536966 None:intergenic 45.0%
CTCAATAGATGACTGTGCAG+GGG - Chr1:16535324-16535343 None:intergenic 45.0%
GAAACTGAAGAAACAAGGGC+CGG - Chr1:16535137-16535156 None:intergenic 45.0%
GACAGAAGTCAATGGAGATG+CGG - Chr1:16535288-16535307 None:intergenic 45.0%
GATAGAGCTGCACAAGACAA+CGG - Chr1:16535347-16535366 None:intergenic 45.0%
GATGTGAAAGCCTGCAAAGA+TGG + Chr1:16533373-16533392 MsG0180001145.01.T01:intron 45.0%
GCTCAATAGATGACTGTGCA+GGG - Chr1:16535325-16535344 None:intergenic 45.0%
GGAAAAATCATGGTGACTCG+TGG - Chr1:16534855-16534874 None:intergenic 45.0%
GGTTGCTGTAAGCAATACGT+GGG + Chr1:16534460-16534479 MsG0180001145.01.T01:intron 45.0%
GTTGCTGTAAGCAATACGTG+GGG + Chr1:16534461-16534480 MsG0180001145.01.T01:intron 45.0%
TAACTGGGACACCTTTCTTC+CGG + Chr1:16535115-16535134 MsG0180001145.01.T01:CDS 45.0%
TAAGCACTTGTGAGACGGTT+TGG + Chr1:16533569-16533588 MsG0180001145.01.T01:intron 45.0%
TCAGAAGGGAAGTTTGGACT+GGG + Chr1:16536810-16536829 MsG0180001145.01.T01:CDS 45.0%
TCATCTGATATTTCCTCGGC+TGG + Chr1:16535377-16535396 MsG0180001145.01.T01:CDS 45.0%
TCCGATGAGTCCCAAATGTA+GGG - Chr1:16535850-16535869 None:intergenic 45.0%
TCGTACAGTGTAGTGGTCAT+GGG + Chr1:16535036-16535055 MsG0180001145.01.T01:CDS 45.0%
TCTTCAGCAGAAATTCCGGT+TGG + Chr1:16535155-16535174 MsG0180001145.01.T01:CDS 45.0%
TGCATGGCTACATAGTTGCT+TGG + Chr1:16535637-16535656 MsG0180001145.01.T01:CDS 45.0%
TGGTTGCTGTAAGCAATACG+TGG + Chr1:16534459-16534478 MsG0180001145.01.T01:intron 45.0%
TGTTGTGAGTGAACTTACGG+TGG - Chr1:16533090-16533109 None:intergenic 45.0%
TTCAGAAGGGAAGTTTGGAC+TGG + Chr1:16536809-16536828 MsG0180001145.01.T01:CDS 45.0%
TTCTACGGAGATGATCTGTG+AGG + Chr1:16536960-16536979 MsG0180001145.01.T01:CDS 45.0%
! AATCAGGTGAAGGTGTAGTG+CGG - Chr1:16536867-16536886 None:intergenic 45.0%
! ACCCTGTTTGCTTCGGTTTT+GGG + Chr1:16536376-16536395 MsG0180001145.01.T01:intron 45.0%
! ATGAATTGCTCATTCGGTGG+CGG - Chr1:16533253-16533272 None:intergenic 45.0%
! CGGTATTGGGTGCATTAACT+GGG + Chr1:16535100-16535119 MsG0180001145.01.T01:CDS 45.0%
! CTCCTCTAGCTTATCACAGT+CGG + Chr1:16535208-16535227 MsG0180001145.01.T01:CDS 45.0%
! TACCCTGTTTGCTTCGGTTT+TGG + Chr1:16536375-16536394 MsG0180001145.01.T01:intron 45.0%
! TCCTCTAGCTTATCACAGTC+GGG + Chr1:16535209-16535228 MsG0180001145.01.T01:CDS 45.0%
! TGAACCACCGTGATTTTGTG+AGG + Chr1:16534800-16534819 MsG0180001145.01.T01:intron 45.0%
! TGGTGACTCGTGGTGATTTT+TGG - Chr1:16534845-16534864 None:intergenic 45.0%
!! AGTTGATGAGGGAAAATGCC+GGG + Chr1:16535676-16535695 MsG0180001145.01.T01:CDS 45.0%
!!! CGCTGGTGCTGTTTTTTCTA+CGG + Chr1:16536945-16536964 MsG0180001145.01.T01:CDS 45.0%
!! AATATTAGAAAATTTATTAA+TGG - Chr1:16536618-16536637 None:intergenic 5.0%
!! ATAATAAAATTAAATTAACA+AGG + Chr1:16534512-16534531 MsG0180001145.01.T01:intron 5.0%
!! TAAATATTATATGAATTAAA+GGG + Chr1:16534371-16534390 MsG0180001145.01.T01:intron 5.0%
AAGCAATACGTGGGGAACGT+GGG + Chr1:16534469-16534488 MsG0180001145.01.T01:intron 50.0%
AATACCCGTCTCCACCAATC+AGG - Chr1:16536883-16536902 None:intergenic 50.0%
AATTGGGACCAGGGACAACA+GGG + Chr1:16535563-16535582 MsG0180001145.01.T01:CDS 50.0%
AGAAACAAGGGCCGGAAGAA+AGG - Chr1:16535129-16535148 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr1:16537037-16537056 None:intergenic 50.0%
AGAGAGCTGTACGTTGCATC+CGG + Chr1:16536833-16536852 MsG0180001145.01.T01:CDS 50.0%
AGTGAACTTACGGTGGTTCG+CGG - Chr1:16533083-16533102 None:intergenic 50.0%
CAACCATATGCTGAACTGGC+TGG + Chr1:16535538-16535557 MsG0180001145.01.T01:CDS 50.0%
CCACAGGAGACGAGATATGA+TGG + Chr1:16535787-16535806 MsG0180001145.01.T01:CDS 50.0%
CCATCATATCTCGTCTCCTG+TGG - Chr1:16535790-16535809 None:intergenic 50.0%
CCTACAGGCCTTCAACTCAA+GGG + Chr1:16536917-16536936 MsG0180001145.01.T01:CDS 50.0%
CGACTGTGATAAGCTAGAGG+AGG - Chr1:16535210-16535229 None:intergenic 50.0%
CTACACCTTCACCTGATTGG+TGG + Chr1:16536869-16536888 MsG0180001145.01.T01:CDS 50.0%
CTGGTAAGCTAGCTGATAGC+TGG + Chr1:16533971-16533990 MsG0180001145.01.T01:intron 50.0%
CTTCACCTGATTGGTGGAGA+CGG + Chr1:16536875-16536894 MsG0180001145.01.T01:CDS 50.0%
GAAAAAACAGCACCAGCGGT+AGG - Chr1:16536943-16536962 None:intergenic 50.0%
GCACTACACCTTCACCTGAT+TGG + Chr1:16536866-16536885 MsG0180001145.01.T01:CDS 50.0%
GCCCAAAACCGAAGCAAACA+GGG - Chr1:16536380-16536399 None:intergenic 50.0%
GCTAGACTCGTTTGACCAAC+CGG - Chr1:16535173-16535192 None:intergenic 50.0%
GCTGAACTGGCTGGTGAATT+GGG + Chr1:16535547-16535566 MsG0180001145.01.T01:CDS 50.0%
GGCTCAATAGATGACTGTGC+AGG - Chr1:16535326-16535345 None:intergenic 50.0%
GTAGCCTCACAAAATCACGG+TGG - Chr1:16534807-16534826 None:intergenic 50.0%
GTCCTTGGGGAACCATTGAA+CGG + Chr1:16535947-16535966 MsG0180001145.01.T01:CDS 50.0%
GTCGTACAGTGTAGTGGTCA+TGG + Chr1:16535035-16535054 MsG0180001145.01.T01:CDS 50.0%
GTTCGGATGACTGGTGACAT+TGG + Chr1:16534767-16534786 MsG0180001145.01.T01:intron 50.0%
TAAGCAATACGTGGGGAACG+TGG + Chr1:16534468-16534487 MsG0180001145.01.T01:intron 50.0%
TACGGAGCTTGTGCGGTATT+GGG + Chr1:16535087-16535106 MsG0180001145.01.T01:CDS 50.0%
TCACCAGCCAGTTCAGCATA+TGG - Chr1:16535544-16535563 None:intergenic 50.0%
TCACGGAACGCAATTGCTCA+TGG - Chr1:16534992-16535011 None:intergenic 50.0%
TCCCGACTGTGATAAGCTAG+AGG - Chr1:16535213-16535232 None:intergenic 50.0%
TCTTGCAACATAGCTGGCGA+AGG - Chr1:16535463-16535482 None:intergenic 50.0%
TGAAGGCCTGGTTGATCAAG+TGG - Chr1:16536192-16536211 None:intergenic 50.0%
TGATTGGTGGAGACGGGTAT+TGG + Chr1:16536882-16536901 MsG0180001145.01.T01:CDS 50.0%
TGCCCAAAACCGAAGCAAAC+AGG - Chr1:16536381-16536400 None:intergenic 50.0%
TGCTGAACTGGCTGGTGAAT+TGG + Chr1:16535546-16535565 MsG0180001145.01.T01:CDS 50.0%
TTACGGAGCTTGTGCGGTAT+TGG + Chr1:16535086-16535105 MsG0180001145.01.T01:CDS 50.0%
TTAGCAATTGTGCTTGCCGG+AGG - Chr1:16535242-16535261 None:intergenic 50.0%
TTCACCTGATTGGTGGAGAC+GGG + Chr1:16536876-16536895 MsG0180001145.01.T01:CDS 50.0%
TTTAGACTGTTGTCCAGCCG+AGG - Chr1:16535393-16535412 None:intergenic 50.0%
TTTGACGTGTTGTGAAGGCC+TGG - Chr1:16536204-16536223 None:intergenic 50.0%
! GCCCTACATTTGGGACTCAT+CGG + Chr1:16535846-16535865 MsG0180001145.01.T01:CDS 50.0%
! GCGGTATTGGGTGCATTAAC+TGG + Chr1:16535099-16535118 MsG0180001145.01.T01:CDS 50.0%
! TGGTTCGCGGATTGTGTCAT+CGG - Chr1:16533070-16533089 None:intergenic 50.0%
!! CCTTGAGTTGAAGGCCTGTA+GGG - Chr1:16536919-16536938 None:intergenic 50.0%
AGTGTAGTGGTCATGGGCCA+CGG + Chr1:16535042-16535061 MsG0180001145.01.T01:CDS 55.0%
CATCAACTCCCTGTTGTCCC+TGG - Chr1:16535574-16535593 None:intergenic 55.0%
CCACTACACTGTACGACCAG+CGG - Chr1:16535032-16535051 None:intergenic 55.0%
CCCTACAGGCCTTCAACTCA+AGG + Chr1:16536916-16536935 MsG0180001145.01.T01:CDS 55.0%
CGAGAATTGGAACACGCGCT+GGG - Chr1:16532914-16532933 None:intergenic 55.0%
CGTCTCCACCAATCAGGTGA+AGG - Chr1:16536877-16536896 None:intergenic 55.0%
CTCCGTTCAATGGTTCCCCA+AGG - Chr1:16535952-16535971 None:intergenic 55.0%
GAATTGGGACCAGGGACAAC+AGG + Chr1:16535562-16535581 MsG0180001145.01.T01:CDS 55.0%
GTGCAGGGGAGCCAATAGTA+TGG - Chr1:16535310-16535329 None:intergenic 55.0%
TCGAGAATTGGAACACGCGC+TGG - Chr1:16532915-16532934 None:intergenic 55.0%
TGGCTGGTGAATTGGGACCA+GGG + Chr1:16535554-16535573 MsG0180001145.01.T01:CDS 55.0%
TGGGGAACCATTGAACGGAG+AGG + Chr1:16535952-16535971 MsG0180001145.01.T01:CDS 55.0%
! GGTTCGCGGATTGTGTCATC+GGG - Chr1:16533069-16533088 None:intergenic 55.0%
! GTGAGACGGTTTGGGAGAAC+TGG + Chr1:16533578-16533597 MsG0180001145.01.T01:intron 55.0%
!! CCCTTGAGTTGAAGGCCTGT+AGG - Chr1:16536920-16536939 None:intergenic 55.0%
!! GGAGTGTTGTAGCGGAAGCT+GGG - Chr1:16532775-16532794 None:intergenic 55.0%
!! GTGGAGACGGGTATTGGTAC+TGG + Chr1:16536888-16536907 MsG0180001145.01.T01:CDS 55.0%
!! TGGAGTGTTGTAGCGGAAGC+TGG - Chr1:16532776-16532795 None:intergenic 55.0%
!! TGGTACTGGCTTCTCCCTAC+AGG + Chr1:16536902-16536921 MsG0180001145.01.T01:CDS 55.0%
ACAGTCGGGAATGCTGCCTC+CGG + Chr1:16535223-16535242 MsG0180001145.01.T01:CDS 60.0%
CAATACGTGGGGAACGTGGG+TGG + Chr1:16534472-16534491 MsG0180001145.01.T01:intron 60.0%
CCGCTGGTCGTACAGTGTAG+TGG + Chr1:16535029-16535048 MsG0180001145.01.T01:CDS 60.0%
CTGGCTGGTGAATTGGGACC+AGG + Chr1:16535553-16535572 MsG0180001145.01.T01:CDS 60.0%
GAATTGGAACACGCGCTGGG+TGG - Chr1:16532911-16532930 None:intergenic 60.0%
TCAACTCAAGGGCCTACCGC+TGG + Chr1:16536928-16536947 MsG0180001145.01.T01:CDS 60.0%
! GTGTAGTGCGGAGAGCATGC+CGG - Chr1:16536855-16536874 None:intergenic 60.0%
!! GCGGTAGGCCCTTGAGTTGA+AGG - Chr1:16536928-16536947 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 16532740 16537089 16532740 ID=MsG0180001145.01;Name=MsG0180001145.01
Chr1 mRNA 16532740 16537089 16532740 ID=MsG0180001145.01.T01;Parent=MsG0180001145.01;Name=MsG0180001145.01.T01;_AED=0.46;_eAED=0.47;_QI=103|1|0.8|1|0.5|0.6|5|0|515
Chr1 exon 16532740 16532962 16532740 ID=MsG0180001145.01.T01:exon:4984;Parent=MsG0180001145.01.T01
Chr1 exon 16533048 16533091 16533048 ID=MsG0180001145.01.T01:exon:4985;Parent=MsG0180001145.01.T01
Chr1 exon 16533207 16533306 16533207 ID=MsG0180001145.01.T01:exon:4986;Parent=MsG0180001145.01.T01
Chr1 exon 16534987 16535973 16534987 ID=MsG0180001145.01.T01:exon:4987;Parent=MsG0180001145.01.T01
Chr1 exon 16536793 16537089 16536793 ID=MsG0180001145.01.T01:exon:4988;Parent=MsG0180001145.01.T01
Chr1 five_prime_UTR 16532740 16532842 16532740 ID=MsG0180001145.01.T01:five_prime_utr;Parent=MsG0180001145.01.T01
Chr1 CDS 16532843 16532962 16532843 ID=MsG0180001145.01.T01:cds;Parent=MsG0180001145.01.T01
Chr1 CDS 16533048 16533091 16533048 ID=MsG0180001145.01.T01:cds;Parent=MsG0180001145.01.T01
Chr1 CDS 16533207 16533306 16533207 ID=MsG0180001145.01.T01:cds;Parent=MsG0180001145.01.T01
Chr1 CDS 16534987 16535973 16534987 ID=MsG0180001145.01.T01:cds;Parent=MsG0180001145.01.T01
Chr1 CDS 16536793 16537089 16536793 ID=MsG0180001145.01.T01:cds;Parent=MsG0180001145.01.T01
Gene Sequence

>MsG0180001145.01.T01

ATGGATCAATCTCAAAATCAAAGATCAATTACAACAACAACAACACAATCGCGTTCTCTTCAATTCCACCCAGCGCGTGTTCCAATTCTCGATCTCTTCAACCTCTACTTAGGACTTGGAAGAAACAGTCGTAACAAACCCGATGACACAATCCGCGAACCACCGAACAAAACGCAGAAACGTGTGCACGCGATTAACAGAGAGCTTCCGCCACCGAATGAGCAATTCATTGTTGATTTTGAGCAGCTTCAGAGTCAGTTTCCTGACCATGAGCAATTGCGTTCCGTGACAGAAGCTATTCTTATACCGCTGGTCGTACAGTGTAGTGGTCATGGGCCACGGTCAGACTTTCTGCTTTTTGTTTTACGGAGCTTGTGCGGTATTGGGTGCATTAACTGGGACACCTTTCTTCCGGCCCTTGTTTCTTCAGTTTCTTCAGCAGAAATTCCGGTTGGTCAAACGAGTCTAGCAGTGTCAACAGTTACCTCCTCTAGCTTATCACAGTCGGGAATGCTGCCTCCGGCAAGCACAATTGCTAATTCTAATTTTCAGTCTTCAAATCCCGCATCTCCATTGACTTCTGTCCATACTATTGGCTCCCCTGCACAGTCATCTATTGAGCCGTTGTCTTGTGCAGCTCTATCTCCTGTAAAATCATCTGATATTTCCTCGGCTGGACAACAGTCTAAACAAAGAGGTAGCCCATCTGTTAGAAATAATGATATCAGTTACAGTAGCCTTCGCCAGCTATGTTGCAAGATTATTTTAACCGGTCTTGAGTTCAGTTTGAAACCCGTGACATATGCCGAAATCTTCAACCATATGCTGAACTGGCTGGTGAATTGGGACCAGGGACAACAGGGAGTTGATGAATCTGATATTCAAAAAACATGGAGACCTGACAAATCCTTAGTTGCATGGCTACATAGTTGCTTGGATGTGATCTGGCTTTTAGTTGATGAGGGAAAATGCCGGGTTCCCTTTTATGAATTATTACGCAGTGATTTGCAATTCATAGAGAATATACCTGATGATGAAGCATTATTTACACTTATCTTGGAGATCCACAGGAGACGAGATATGATGGCTATGCACATGCAAATGTTAGACCAGCATCTACATTGCCCTACATTTGGGACTCATCGGATCCTGAATCAGACAACACCTATTATTTCAGGTGAAGAAAAAGCACACTTGCGCCTATCACCGATCTCATATTTAAGTGTCCTTGGGGAACCATTGAACGGAGAGGATATTGCAATCTCTATTCAGAAGGGAAGTTTGGACTGGGAGAGAGCTGTACGTTGCATCCGGCATGCTCTCCGCACTACACCTTCACCTGATTGGTGGAGACGGGTATTGGTACTGGCTTCTCCCTACAGGCCTTCAACTCAAGGGCCTACCGCTGGTGCTGTTTTTTCTACGGAGATGATCTGTGAGGCAACCATTGATAGAATCGTAGAACTATTGAAATTAACAAATTCAGGCAATGATCCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATGAGTTAG
Protein sequence

>MsG0180001145.01.T01

MDQSQNQRSITTTTTQSRSLQFHPARVPILDLFNLYLGLGRNSRNKPDDTIREPPNKTQKRVHAINRELPPPNEQFIVDFEQLQSQFPDHEQLRSVTEAILIPLVVQCSGHGPRSDFLLFVLRSLCGIGCINWDTFLPALVSSVSSAEIPVGQTSLAVSTVTSSSLSQSGMLPPASTIANSNFQSSNPASPLTSVHTIGSPAQSSIEPLSCAALSPVKSSDISSAGQQSKQRGSPSVRNNDISYSSLRQLCCKIILTGLEFSLKPVTYAEIFNHMLNWLVNWDQGQQGVDESDIQKTWRPDKSLVAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTTPIISGEEKAHLRLSPISYLSVLGEPLNGEDIAISIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLASPYRPSTQGPTAGAVFSTEMICEATIDRIVELLKLTNSGNDPLSLSLSLYIYIYIYMS*