AlfalfaGEDB | MsG0180001684.01

M. sativa cultivar ZhongmuNo.1 / MsG0180001684.01

KEGG: -
GO: GO:0003676
PFAM: PF13456

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001684.01.T01	XP_024630883.1	75.862	116	28	0	2	117	71	186	1.64E-56	185
MsG0180001684.01.T02	XP_024630883.1	74.51	102	26	0	1	102	85	186	6.19E-48	163

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001684.01.T01	G7IF75	67.273	110	36	0	2	111	73	182	5.10e-42	146
MsG0180001684.01.T02	G7IGN2	69.880	83	25	0	1	83	1	83	4.95e-36	127

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0180001684.01	MsG0280009322.01	PPI
MsG0180001684.01	MsG0780041116.01	PPI
MsG0180001684.01	MsG0780041116.01	PPI
MsG0180001684.01	MsG0780041116.01	PPI
MsG0180001684.01	MsG0780040274.01	PPI
MsG0180001684.01	MsG0380013578.01	PPI
MsG0180001684.01	MsG0780040274.01	PPI
MsG0180001684.01	MsG0280010449.01	PPI
MsG0180001684.01	MsG0380013578.01	PPI
MsG0180001684.01	MsG0280010449.01	PPI
MsG0180001684.01	MsG0280009322.01	PPI
MsG0180001684.01	MsG0780041116.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001684.01.T01	MTR_1g088650	67.273	110	36	0	2	111	73	182	1.29e-45	146
MsG0180001684.01.T01	MTR_5g085210	53.968	126	48	1	2	117	106	231	8.18e-40	133
MsG0180001684.01.T01	MTR_2g059470	69.880	83	25	0	16	98	1	83	1.76e-39	127
MsG0180001684.01.T01	MTR_1g034430	54.000	100	46	0	2	101	82	181	9.65e-35	118
MsG0180001684.01.T01	MTR_8g022750	53.636	110	34	2	2	111	192	284	2.20e-32	115
MsG0180001684.01.T01	MTR_5g075610	53.608	97	43	1	21	117	1	95	2.80e-32	109
MsG0180001684.01.T01	MTR_8g031800	57.895	95	39	1	3	97	19	112	6.06e-32	109
MsG0180001684.01.T01	MTR_7g063280	41.739	115	64	1	1	115	61	172	4.36e-30	106
MsG0180001684.01.T01	MTR_4g008270	57.317	82	35	0	17	98	12	93	3.68e-29	101
MsG0180001684.01.T01	MTR_6g089560	49.495	99	50	0	3	101	104	202	6.54e-29	105
MsG0180001684.01.T01	MTR_6g016265	48.000	100	52	0	2	101	26	125	2.15e-28	100
MsG0180001684.01.T01	MTR_1g074240	61.111	72	28	0	16	87	1	72	7.21e-27	95.1
MsG0180001684.01.T01	MTR_7g013520	52.222	90	43	0	2	91	57	146	8.23e-27	98.2
MsG0180001684.01.T01	MTR_3g116210	45.455	99	54	0	1	99	83	181	1.89e-26	97.4
MsG0180001684.01.T01	MTR_6g453270	47.253	91	48	0	3	93	288	378	5.86e-26	100
MsG0180001684.01.T01	MTR_1g050488	52.564	78	37	0	3	80	86	163	6.29e-26	95.5
MsG0180001684.01.T01	MTR_5g049680	52.809	89	41	1	2	89	18	106	6.65e-26	93.6
MsG0180001684.01.T01	MTR_2g047100	48.214	112	43	1	2	113	5	101	3.46e-25	91.7
MsG0180001684.01.T01	MTR_0015s0120	54.118	85	39	0	2	86	280	364	9.96e-25	96.7
MsG0180001684.01.T01	MTR_1g017840	51.042	96	47	0	3	98	66	161	1.36e-24	92.0
MsG0180001684.01.T01	MTR_1g074090	51.250	80	39	0	1	80	67	146	1.89e-24	91.3
MsG0180001684.01.T01	MTR_1g069475	45.652	92	50	0	3	94	152	243	2.38e-24	93.6
MsG0180001684.01.T01	MTR_8g098925	47.312	93	49	0	19	111	69	161	3.28e-24	90.9
MsG0180001684.01.T01	MTR_1g045340	40.367	109	65	0	3	111	72	180	5.39e-24	91.3
MsG0180001684.01.T01	MTR_5g083200	39.450	109	66	0	3	111	86	194	1.07e-23	90.5
MsG0180001684.01.T01	MTR_0002s1220	39.450	109	66	0	3	111	86	194	1.07e-23	90.5
MsG0180001684.01.T01	MTR_5g036320	51.250	80	39	0	2	81	66	145	1.51e-23	89.0
MsG0180001684.01.T01	MTR_4g029360	43.860	114	64	0	2	115	114	227	1.88e-23	90.9
MsG0180001684.01.T01	MTR_8g099580	52.083	96	46	0	3	98	194	289	2.68e-23	92.0
MsG0180001684.01.T01	MTR_3g111390	37.615	109	68	0	3	111	86	194	2.40e-22	87.0
MsG0180001684.01.T01	MTR_1g070820	37.615	109	68	0	3	111	86	194	2.40e-22	87.0
MsG0180001684.01.T01	MTR_8g036780	48.780	82	42	0	2	83	21	102	4.52e-22	84.3
MsG0180001684.01.T01	MTR_5g037920	42.727	110	61	2	3	111	86	194	1.46e-21	85.9
MsG0180001684.01.T01	MTR_5g034450	51.282	78	38	0	2	79	36	113	1.48e-21	82.8
MsG0180001684.01.T01	MTR_4g046027	67.857	56	18	0	2	57	114	169	1.52e-21	84.3
MsG0180001684.01.T01	MTR_0093s0070	51.250	80	39	0	18	97	126	205	1.61e-21	85.1
MsG0180001684.01.T01	MTR_1g081930	44.000	100	56	0	2	101	25	124	1.85e-21	83.2
MsG0180001684.01.T01	MTR_2g027020	45.283	106	50	2	3	104	16	117	7.56e-21	83.2
MsG0180001684.01.T01	MTR_4g094370	64.912	57	20	0	1	57	21	77	3.67e-20	78.2
MsG0180001684.01.T01	MTR_8g079540	44.186	86	48	0	3	88	36	121	8.35e-20	78.6
MsG0180001684.01.T01	MTR_6g046670	55.224	67	30	0	2	68	110	176	1.37e-19	80.1
MsG0180001684.01.T01	MTR_1g099430	52.055	73	33	1	2	72	112	184	1.40e-19	80.1
MsG0180001684.01.T01	MTR_8g038340	52.113	71	34	0	2	72	176	246	6.52e-19	79.3
MsG0180001684.01.T01	MTR_1g022215	42.683	82	47	0	3	84	2	83	7.69e-19	75.1
MsG0180001684.01.T01	MTR_8g059135	37.500	104	64	1	5	108	19	121	1.66e-18	75.5
MsG0180001684.01.T01	MTR_6g033225	45.679	81	44	0	3	83	58	138	4.86e-18	74.7
MsG0180001684.01.T01	MTR_2g017550	52.239	67	32	0	2	68	95	161	5.14e-18	75.1
MsG0180001684.01.T01	MTR_6g016355	44.595	74	41	0	1	74	102	175	1.14e-17	74.7
MsG0180001684.01.T01	MTR_4g094272	56.667	60	25	1	3	62	82	140	3.99e-17	72.4
MsG0180001684.01.T01	MTR_1g109000	49.315	73	37	0	3	75	14	86	1.34e-16	69.3
MsG0180001684.01.T01	MTR_1g018300	41.071	112	60	1	2	113	50	155	1.79e-16	72.8
MsG0180001684.01.T01	MTR_8g031080	58.824	51	21	0	3	53	277	327	1.82e-15	71.2
MsG0180001684.01.T01	MTR_6g034915	32.479	117	49	1	3	89	13	129	1.94e-15	68.9
MsG0180001684.01.T01	MTR_3g462490	56.897	58	25	0	3	60	89	146	8.04e-15	69.7
MsG0180001684.01.T01	MTR_7g078610	55.357	56	25	0	2	57	38	93	1.14e-14	64.7
MsG0180001684.01.T01	MTR_1g062840	40.000	80	41	1	38	117	3	75	1.73e-14	64.3
MsG0180001684.01.T01	MTR_6g045427	35.849	106	40	1	2	107	160	237	8.30e-14	65.5
MsG0180001684.01.T01	MTR_1g054905	52.632	57	27	0	2	58	88	144	8.55e-14	64.3
MsG0180001684.01.T01	MTR_1g045560	35.052	97	47	1	21	117	1	81	8.63e-14	62.4
MsG0180001684.01.T01	MTR_2g055490	50.847	59	29	0	20	78	12	70	1.02e-13	62.8
MsG0180001684.01.T01	MTR_8g088220	43.421	76	43	0	23	98	2	77	1.44e-13	61.6
MsG0180001684.01.T01	MTR_8g028785	33.333	114	52	1	3	116	270	359	2.11e-13	65.5
MsG0180001684.01.T01	MTR_7g053400	42.424	66	36	1	19	82	179	244	4.16e-13	63.9
MsG0180001684.01.T01	MTR_4g035890	53.061	49	23	0	2	50	101	149	5.91e-13	61.6
MsG0180001684.01.T01	MTR_5g068115	61.702	47	18	0	2	48	21	67	7.39e-13	59.3
MsG0180001684.01.T01	MTR_7g082130	31.858	113	54	1	5	117	34	123	7.83e-13	61.2
MsG0180001684.01.T01	MTR_1g087480	63.043	46	17	0	2	47	175	220	9.24e-13	62.4
MsG0180001684.01.T01	MTR_5g069700	45.161	62	34	0	40	101	6	67	3.16e-12	58.2
MsG0180001684.01.T01	MTR_6g016135	43.333	60	34	0	19	78	383	442	9.67e-12	60.8
MsG0180001684.01.T01	MTR_8g076740	56.000	50	22	0	51	100	53	102	1.91e-11	59.7
MsG0180001684.01.T01	MTR_3g072290	59.524	42	17	0	7	48	3	44	4.15e-11	54.7
MsG0180001684.01.T01	MTR_6g013970	33.708	89	59	0	7	95	91	179	5.40e-11	57.8
MsG0180001684.01.T02	MTR_2g059470	69.880	83	25	0	1	83	1	83	1.25e-39	127
MsG0180001684.01.T02	MTR_1g088650	65.625	96	33	0	1	96	87	182	2.48e-38	127
MsG0180001684.01.T02	MTR_5g085210	52.679	112	43	1	1	102	120	231	6.05e-34	117
MsG0180001684.01.T02	MTR_5g075610	53.608	97	43	1	6	102	1	95	2.41e-32	109
MsG0180001684.01.T02	MTR_4g008270	57.317	82	35	0	2	83	12	93	2.40e-29	101
MsG0180001684.01.T02	MTR_7g063280	44.444	99	55	0	2	100	74	172	1.01e-28	102
MsG0180001684.01.T02	MTR_1g074240	61.111	72	28	0	1	72	1	72	4.80e-27	95.1
MsG0180001684.01.T02	MTR_1g034430	49.412	85	43	0	2	86	97	181	8.86e-26	95.1
MsG0180001684.01.T02	MTR_8g031800	54.321	81	36	1	2	82	33	112	8.54e-25	90.5
MsG0180001684.01.T02	MTR_8g098925	47.312	93	49	0	4	96	69	161	2.75e-24	90.5
MsG0180001684.01.T02	MTR_8g022750	60.294	68	27	0	29	96	217	284	8.36e-23	89.7
MsG0180001684.01.T02	MTR_6g089560	48.235	85	44	0	2	86	118	202	1.16e-22	88.2
MsG0180001684.01.T02	MTR_0093s0070	51.250	80	39	0	3	82	126	205	1.25e-21	85.1
MsG0180001684.01.T02	MTR_6g016265	44.186	86	48	0	1	86	40	125	2.83e-20	79.3
MsG0180001684.01.T02	MTR_7g013520	49.333	75	38	0	2	76	72	146	1.02e-19	79.3
MsG0180001684.01.T02	MTR_6g453270	45.333	75	41	0	4	78	304	378	2.37e-19	81.6
MsG0180001684.01.T02	MTR_4g029360	43.434	99	56	0	2	100	129	227	1.18e-18	77.8
MsG0180001684.01.T02	MTR_8g059135	40.659	91	54	0	3	93	31	121	1.32e-18	75.1
MsG0180001684.01.T02	MTR_1g017840	51.250	80	39	0	4	83	82	161	1.59e-18	75.9
MsG0180001684.01.T02	MTR_3g116210	40.964	83	49	0	2	84	99	181	2.91e-18	75.9
MsG0180001684.01.T02	MTR_8g099580	51.250	80	39	0	4	83	210	289	4.78e-18	77.4
MsG0180001684.01.T02	MTR_1g069475	42.308	78	45	0	2	79	166	243	6.52e-18	76.3
MsG0180001684.01.T02	MTR_1g050488	46.875	64	34	0	2	65	100	163	8.51e-18	73.9
MsG0180001684.01.T02	MTR_1g074090	48.438	64	33	0	2	65	83	146	3.25e-17	72.4
MsG0180001684.01.T02	MTR_5g049680	47.297	74	38	1	2	74	33	106	4.40e-17	70.9
MsG0180001684.01.T02	MTR_0015s0120	50.000	70	35	0	2	71	295	364	6.28e-17	74.7
MsG0180001684.01.T02	MTR_5g037920	42.553	94	52	2	4	96	102	194	1.06e-16	72.4
MsG0180001684.01.T02	MTR_5g036320	50.769	65	32	0	2	66	81	145	2.39e-16	69.7
MsG0180001684.01.T02	MTR_5g083200	35.417	96	62	0	1	96	99	194	2.74e-16	70.9
MsG0180001684.01.T02	MTR_0002s1220	35.417	96	62	0	1	96	99	194	2.74e-16	70.9
MsG0180001684.01.T02	MTR_1g045340	35.417	96	62	0	1	96	85	180	3.33e-16	70.5
MsG0180001684.01.T02	MTR_2g047100	43.299	97	40	1	2	98	20	101	4.23e-16	68.2
MsG0180001684.01.T02	MTR_3g111390	34.375	96	63	0	1	96	99	194	1.17e-15	69.3
MsG0180001684.01.T02	MTR_1g070820	34.375	96	63	0	1	96	99	194	1.17e-15	69.3
MsG0180001684.01.T02	MTR_2g027020	43.478	92	44	2	2	89	30	117	1.93e-15	68.6
MsG0180001684.01.T02	MTR_8g036780	46.269	67	36	0	2	68	36	102	6.85e-15	65.5
MsG0180001684.01.T02	MTR_1g062840	40.000	80	41	1	23	102	3	75	1.30e-14	63.9
MsG0180001684.01.T02	MTR_5g034450	47.619	63	33	0	2	64	51	113	3.05e-14	63.5
MsG0180001684.01.T02	MTR_1g045560	35.052	97	47	1	6	102	1	81	4.90e-14	62.8
MsG0180001684.01.T02	MTR_2g055490	50.847	59	29	0	5	63	12	70	7.20e-14	62.8
MsG0180001684.01.T02	MTR_8g088220	43.421	76	43	0	8	83	2	77	1.02e-13	61.2
MsG0180001684.01.T02	MTR_1g022215	41.791	67	39	0	3	69	17	83	1.02e-13	61.6
MsG0180001684.01.T02	MTR_6g034915	38.028	71	44	0	4	74	59	129	1.46e-13	63.2
MsG0180001684.01.T02	MTR_7g053400	42.424	66	36	1	4	67	179	244	3.29e-13	63.5
MsG0180001684.01.T02	MTR_1g081930	38.824	85	52	0	2	86	40	124	3.76e-13	61.2
MsG0180001684.01.T02	MTR_8g079540	40.278	72	43	0	2	73	50	121	4.41e-13	60.8
MsG0180001684.01.T02	MTR_7g082130	33.663	101	44	1	2	102	46	123	8.67e-13	60.5
MsG0180001684.01.T02	MTR_6g033225	44.615	65	36	0	4	68	74	138	9.32e-13	60.5
MsG0180001684.01.T02	MTR_5g069700	45.161	62	34	0	25	86	6	67	2.19e-12	57.8
MsG0180001684.01.T02	MTR_4g046027	63.415	41	15	0	2	42	129	169	2.77e-12	59.7
MsG0180001684.01.T02	MTR_6g046670	51.923	52	25	0	2	53	125	176	2.79e-12	60.1
MsG0180001684.01.T02	MTR_6g016135	43.333	60	34	0	4	63	383	442	4.30e-12	61.2
MsG0180001684.01.T02	MTR_6g045427	43.421	76	33	1	27	92	162	237	5.77e-12	60.1
MsG0180001684.01.T02	MTR_8g076740	56.000	50	22	0	36	85	53	102	1.17e-11	59.7
MsG0180001684.01.T02	MTR_6g016355	43.103	58	33	0	2	59	118	175	1.63e-11	58.2
MsG0180001684.01.T02	MTR_6g013970	38.356	73	45	0	8	80	107	179	5.20e-11	57.4
MsG0180001684.01.T02	MTR_4g094370	58.537	41	17	0	2	42	37	77	5.60e-11	54.3
MsG0180001684.01.T02	MTR_3g465840	39.130	69	42	0	27	95	2	70	9.49e-11	55.5
MsG0180001684.01.T02	MTR_2g017550	50.000	52	26	0	2	53	110	161	9.52e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 26 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTCTCCCCTTCTTTGAATA+TGG	0.227616	1:-25185853	MsG0180001684.01.T01:CDS
TCACTTTACGTCTAATATAA+AGG	0.319753	1:-25185646	MsG0180001684.01.T01:CDS
AGGAGAGAAACAATATTTCT+TGG	0.340414	1:+25185782	None:intergenic
CATATGTCTTCGCGATGATT+TGG	0.353660	1:-25185820	MsG0180001684.01.T01:CDS
CGAAATCTACATTATCATAA+TGG	0.374773	1:+25185694	None:intergenic
TCTTTGAATATGGTGGGTAT+TGG	0.395975	1:-25185843	MsG0180001684.01.T01:CDS
CTCCCCTTCTTTGAATATGG+TGG	0.406440	1:-25185850	MsG0180001684.01.T01:CDS
ATATGTCTTCGCGATGATTT+GGG	0.419249	1:-25185819	MsG0180001684.01.T01:CDS
TCCCCTTCTTTGAATATGGT+GGG	0.450203	1:-25185849	MsG0180001684.01.T01:CDS
ATAAAGGATAATAGTGAGCT+AGG	0.468768	1:-25185630	MsG0180001684.01.T01:CDS
AAAGTGATCAACAAATGTCT+TGG	0.500441	1:+25185662	None:intergenic
GTTGATGTGGGCGAGGCCGT+TGG	0.509783	1:-25185750	MsG0180001684.01.T01:CDS
TCCTACTTGTGATGTTGATG+TGG	0.510813	1:-25185763	MsG0180001684.01.T01:CDS
TCCACTTCAACATCGTATAG+AGG	0.515817	1:+25185727	None:intergenic
CTATACGATGTTGAAGTGGA+TGG	0.531133	1:-25185724	MsG0180001684.01.T01:CDS
TGATAATGTAGATTTCGCTC+TGG	0.537638	1:-25185688	MsG0180001684.01.T01:CDS
ATACCCACCATATTCAAAGA+AGG	0.543896	1:+25185846	None:intergenic
ATTCAAAGAAGGGGAGAATG+AGG	0.549744	1:+25185857	None:intergenic
TACCCACCATATTCAAAGAA+GGG	0.567200	1:+25185847	None:intergenic
TTGTGATGTTGATGTGGGCG+AGG	0.596999	1:-25185757	MsG0180001684.01.T01:CDS
ACCCACCATATTCAAAGAAG+GGG	0.597271	1:+25185848	None:intergenic
CCTACTTGTGATGTTGATGT+GGG	0.600405	1:-25185762	MsG0180001684.01.T01:CDS
AGAAACAATATTTCTTGGCG+AGG	0.610570	1:+25185787	None:intergenic
GCCTCTATACGATGTTGAAG+TGG	0.612172	1:-25185728	MsG0180001684.01.T01:CDS
CCCACATCAACATCACAAGT+AGG	0.681874	1:+25185762	None:intergenic
CAACATCGTATAGAGGCCAA+CGG	0.700871	1:+25185734	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CGAAATCTACATTATCATAA+TGG	+	Chr1:25185727-25185746	None:intergenic	25.0%
!	TCACTTTACGTCTAATATAA+AGG	-	Chr1:25185772-25185791	MsG0180001684.01.T01:CDS	25.0%
	AAAGTGATCAACAAATGTCT+TGG	+	Chr1:25185759-25185778	None:intergenic	30.0%
	AGGAGAGAAACAATATTTCT+TGG	+	Chr1:25185639-25185658	None:intergenic	30.0%
	ATAAAGGATAATAGTGAGCT+AGG	-	Chr1:25185788-25185807	MsG0180001684.01.T01:CDS	30.0%
	AGAAACAATATTTCTTGGCG+AGG	+	Chr1:25185634-25185653	None:intergenic	35.0%
	ATACCCACCATATTCAAAGA+AGG	+	Chr1:25185575-25185594	None:intergenic	35.0%
	ATATGTCTTCGCGATGATTT+GGG	-	Chr1:25185599-25185618	MsG0180001684.01.T01:CDS	35.0%
	ATTCTCCCCTTCTTTGAATA+TGG	-	Chr1:25185565-25185584	MsG0180001684.01.T01:CDS	35.0%
	TACCCACCATATTCAAAGAA+GGG	+	Chr1:25185574-25185593	None:intergenic	35.0%
!	TGATAATGTAGATTTCGCTC+TGG	-	Chr1:25185730-25185749	MsG0180001684.01.T01:CDS	35.0%
!!	TCTTTGAATATGGTGGGTAT+TGG	-	Chr1:25185575-25185594	MsG0180001684.01.T01:CDS	35.0%
	ACCCACCATATTCAAAGAAG+GGG	+	Chr1:25185573-25185592	None:intergenic	40.0%
	ATTCAAAGAAGGGGAGAATG+AGG	+	Chr1:25185564-25185583	None:intergenic	40.0%
	CATATGTCTTCGCGATGATT+TGG	-	Chr1:25185598-25185617	MsG0180001684.01.T01:CDS	40.0%
	CCTACTTGTGATGTTGATGT+GGG	-	Chr1:25185656-25185675	MsG0180001684.01.T01:CDS	40.0%
	CTATACGATGTTGAAGTGGA+TGG	-	Chr1:25185694-25185713	MsG0180001684.01.T01:CDS	40.0%
	TCCACTTCAACATCGTATAG+AGG	+	Chr1:25185694-25185713	None:intergenic	40.0%
	TCCCCTTCTTTGAATATGGT+GGG	-	Chr1:25185569-25185588	MsG0180001684.01.T01:CDS	40.0%
	TCCTACTTGTGATGTTGATG+TGG	-	Chr1:25185655-25185674	MsG0180001684.01.T01:CDS	40.0%
	CAACATCGTATAGAGGCCAA+CGG	+	Chr1:25185687-25185706	None:intergenic	45.0%
	CCCACATCAACATCACAAGT+AGG	+	Chr1:25185659-25185678	None:intergenic	45.0%
	CTCCCCTTCTTTGAATATGG+TGG	-	Chr1:25185568-25185587	MsG0180001684.01.T01:CDS	45.0%
	GCCTCTATACGATGTTGAAG+TGG	-	Chr1:25185690-25185709	MsG0180001684.01.T01:CDS	45.0%
	TTGTGATGTTGATGTGGGCG+AGG	-	Chr1:25185661-25185680	MsG0180001684.01.T01:CDS	50.0%
	GTTGATGTGGGCGAGGCCGT+TGG	-	Chr1:25185668-25185687	MsG0180001684.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	25185539	25185901	25185539	ID=MsG0180001684.01;Name=MsG0180001684.01
Chr1	mRNA	25185539	25185901	25185539	ID=MsG0180001684.01.T01;Parent=MsG0180001684.01;Name=MsG0180001684.01.T01;_AED=0.23;_eAED=0.23;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|120
Chr1	exon	25185539	25185901	25185539	ID=MsG0180001684.01.T01:exon:18358;Parent=MsG0180001684.01.T01
Chr1	CDS	25185539	25185901	25185539	ID=MsG0180001684.01.T01:cds;Parent=MsG0180001684.01.T01
Chr1	mRNA	25185539	25185856	25185539	ID=MsG0180001684.01.T02;Parent=MsG0180001684.01;Name=MsG0180001684.01.T02;_AED=0.26;_eAED=0.26;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|105
Chr1	exon	25185539	25185856	25185539	ID=MsG0180001684.01.T02:exon:18359;Parent=MsG0180001684.01.T02
Chr1	CDS	25185539	25185856	25185539	ID=MsG0180001684.01.T02:cds;Parent=MsG0180001684.01.T02

Gene Sequence

>MsG0180001684.01.T01

ATGTATAAATGTAATATTGATGCCTCATTCTCCCCTTCTTTGAATATGGTGGGTATTGGCATATGTCTTCGCGATGATTTGGGTGAGTTTGTCCTCGCCAAGAAATATTGTTTCTCTCCTACTTGTGATGTTGATGTGGGCGAGGCCGTTGGCCTCTATACGATGTTGAAGTGGATGGAAGATTTCCATTATGATAATGTAGATTTCGCTCTGGACTCCAAGACATTTGTTGATCACTTTACGTCTAATATAAAGGATAATAGTGAGCTAGGTTGTATTATTCATGTTTGTAGACAGTTGTTTGATAATAGTTTTCAGAACTCTAATGTCGAGTTGATGTACCGTCATGTATTCGTTTTTTGA

>MsG0180001684.01.T02

ATGGTGGGTATTGGCATATGTCTTCGCGATGATTTGGGTGAGTTTGTCCTCGCCAAGAAATATTGTTTCTCTCCTACTTGTGATGTTGATGTGGGCGAGGCCGTTGGCCTCTATACGATGTTGAAGTGGATGGAAGATTTCCATTATGATAATGTAGATTTCGCTCTGGACTCCAAGACATTTGTTGATCACTTTACGTCTAATATAAAGGATAATAGTGAGCTAGGTTGTATTATTCATGTTTGTAGACAGTTGTTTGATAATAGTTTTCAGAACTCTAATGTCGAGTTGATGTACCGTCATGTATTCGTTTTTTGA

Protein sequence

>MsG0180001684.01.T01

MYKCNIDASFSPSLNMVGIGICLRDDLGEFVLAKKYCFSPTCDVDVGEAVGLYTMLKWMEDFHYDNVDFALDSKTFVDHFTSNIKDNSELGCIIHVCRQLFDNSFQNSNVELMYRHVFVF*

>MsG0180001684.01.T02

MVGIGICLRDDLGEFVLAKKYCFSPTCDVDVGEAVGLYTMLKWMEDFHYDNVDFALDSKTFVDHFTSNIKDNSELGCIIHVCRQLFDNSFQNSNVELMYRHVFVF*