AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001711.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001711.01.T01 MTR_1g041465 90.972 1152 94 3 1 1142 1 1152 0.0 2086
MsG0180001711.01.T01 MTR_1g075740 57.518 1257 389 26 1 1142 1 1227 0.0 1222
MsG0180001711.01.T01 MTR_2g079850 33.805 565 258 21 1 496 1 518 5.97e-64 237
MsG0180001711.01.T01 MTR_2g012990 32.830 530 276 18 1 477 1 503 1.12e-60 225
MsG0180001711.01.T01 MTR_8g022280 34.583 240 121 5 1 239 1 205 5.30e-31 132
MsG0180001711.01.T01 MTR_2g079850 28.760 379 189 17 186 496 1 366 5.09e-19 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001711.01.T01 AT5G43310 39.984 1233 528 37 1 1132 1 1122 0.0 663
MsG0180001711.01.T01 AT5G43310 39.984 1233 528 37 1 1132 1 1122 0.0 662
MsG0180001711.01.T01 AT5G43310 39.984 1233 528 37 1 1132 1 1122 0.0 662
MsG0180001711.01.T01 AT5G43310 38.539 1287 528 38 1 1132 1 1179 0.0 652
MsG0180001711.01.T01 AT5G43310 42.664 1036 418 31 1 940 1 956 0.0 627
MsG0180001711.01.T01 AT1G61100 39.521 334 169 8 1 321 1 314 6.15e-61 224
MsG0180001711.01.T01 AT1G61100 39.521 334 168 8 1 321 1 313 7.52e-61 224
MsG0180001711.01.T01 AT3G14172 35.685 241 115 4 1 239 1 203 8.75e-34 142
MsG0180001711.01.T01 AT1G17360 29.876 241 113 3 1 237 1 189 1.34e-27 121
MsG0180001711.01.T01 AT3G14172 33.195 241 113 5 1 239 1 195 4.81e-27 120
MsG0180001711.01.T01 AT1G72410 29.536 237 126 3 1 237 1 196 2.55e-26 117
MsG0180001711.01.T01 AT1G72410 29.536 237 126 3 1 237 1 196 2.79e-26 117
MsG0180001711.01.T01 AT3G14172 32.292 192 90 4 50 239 12 165 1.69e-17 89.0

Find 307 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTTTCAATAAATAATTT+TGG 0.125059 1:-25858558 None:intergenic
GCAATACTGATTCCGAAAAT+TGG 0.139663 1:+25858218 MsG0180001711.01.T01:CDS
GTGAAGAACCGCCTACATTT+TGG 0.144291 1:-25858984 None:intergenic
CATGGTGGCTTCTATGTTTA+AGG 0.158280 1:-25862640 None:intergenic
CCTTTATCAGCTCCTCTTTC+AGG 0.158311 1:-25858919 None:intergenic
TTCCCTATCAGAACTGTTTC+TGG 0.176787 1:+25859560 MsG0180001711.01.T01:CDS
TTTATGGCACTTTCTAAAAT+AGG 0.206662 1:+25861333 MsG0180001711.01.T01:three_prime_UTR
TTCGGTTTACCCCTTCTTAT+TGG 0.223545 1:-25859126 None:intergenic
AAAGTAGAACCTTGAGAATA+TGG 0.244404 1:-25860984 None:intergenic
TTCCAAAATCTAAAATATTT+AGG 0.244899 1:+25862114 MsG0180001711.01.T01:three_prime_UTR
TTGCTATGTAATTGATATTT+CGG 0.254052 1:-25858366 None:intergenic
GCATTTCCCTCAATATTTAC+TGG 0.254633 1:-25858817 None:intergenic
CAATTCAGCTGGTTGATAAT+TGG 0.258877 1:-25858887 None:intergenic
TTTCCATTTCAAACCGGTTT+TGG 0.268707 1:-25858606 None:intergenic
TCAGATCATGCCAATGAAAT+TGG 0.279170 1:+25861245 MsG0180001711.01.T01:CDS
GGGTACCATATTTGTTCTTA+AGG 0.285305 1:-25860221 None:intergenic
AACTGGTTTAGTTCGAATTC+AGG 0.288151 1:-25862163 None:intergenic
CAGTTCTGATAGGGAATCTT+TGG 0.290351 1:-25859553 None:intergenic
TTGATCTTGACATCTGAATA+TGG 0.292499 1:+25861576 MsG0180001711.01.T01:three_prime_UTR
TTTAGATTATCTGGTTGATT+AGG 0.300864 1:+25862266 MsG0180001711.01.T01:three_prime_UTR
CCACTTGAAATTACTTCATT+GGG 0.301632 1:-25862436 None:intergenic
TCCAATGGACTAGGTTTATT+CGG 0.311582 1:-25859144 None:intergenic
TCCACTTGAAATTACTTCAT+TGG 0.314627 1:-25862437 None:intergenic
ATGTTATTCAAACACTGATT+TGG 0.314913 1:+25858732 MsG0180001711.01.T01:CDS
TTTAGGTGATTGTGTTGATT+TGG 0.316692 1:+25862131 MsG0180001711.01.T01:three_prime_UTR
CACAGATTTGTGAACTTCTT+CGG 0.318693 1:-25858440 None:intergenic
TAGTTTATGATGAGGACTTT+AGG 0.320768 1:-25862339 None:intergenic
TTCATCCTTAAGAACAAATA+TGG 0.322487 1:+25860216 MsG0180001711.01.T01:CDS
AGTCAAATCTAAAGGATCTT+TGG 0.322673 1:-25858665 None:intergenic
ATAGTGTTACCTACAGTATT+TGG 0.324808 1:-25862044 None:intergenic
TTTCTCAGGAAGGAAGATTA+AGG 0.327949 1:+25856253 MsG0180001711.01.T01:intron
TTTCTCAAGTGTAGAGTTCC+TGG 0.329903 1:-25861111 None:intergenic
CTCAGCTACTGGGCACAATA+TGG 0.331389 1:+25861220 MsG0180001711.01.T01:CDS
TACAATGTACCAACGTATAT+TGG 0.332728 1:+25862360 MsG0180001711.01.T01:three_prime_UTR
TTAAGACGGCTGTTAAAGTT+TGG 0.332890 1:+25861182 MsG0180001711.01.T01:CDS
AACCGGTTTGAAATGGAAAA+AGG 0.335540 1:+25858610 MsG0180001711.01.T01:CDS
ACTCAGTTACAAGCAAATTA+AGG 0.335824 1:+25859642 MsG0180001711.01.T01:CDS
CTGCTTGTTATTGATGCCTT+AGG 0.339662 1:-25859722 None:intergenic
TGTGTAAATTAGGTTTGATT+TGG 0.342294 1:+25854790 MsG0180001711.01.T01:intron
CGTTAGCACACCTGAGATAC+TGG 0.344479 1:+25855587 MsG0180001711.01.T01:CDS
TGATGGCATGGTTGACTTGA+TGG 0.344805 1:-25859435 None:intergenic
CAACTCAAACCAAGTATAAC+TGG 0.344865 1:-25862180 None:intergenic
GTAGAAAATTCATGTCTCTA+TGG 0.351433 1:+25857111 MsG0180001711.01.T01:CDS
AACAGCCGTCTTAACCCTTT+CGG 0.352684 1:-25861173 None:intergenic
TTATCCAACATCTTAGATCT+TGG 0.354724 1:-25859048 None:intergenic
CTTATTTAGATAGATACTAA+TGG 0.356695 1:-25861995 None:intergenic
GCCTTCAAGTGGCATAGAAA+TGG 0.356780 1:-25854863 None:intergenic
TGCATAAATGCACTGTTTCC+TGG 0.360729 1:-25858109 None:intergenic
GGTTGACTTGATGGTTGATT+TGG 0.363027 1:-25859426 None:intergenic
ACCATTCGCTCCAATTTCAT+TGG 0.370041 1:-25861255 None:intergenic
CTACAGTATTTGGTCTTGTT+CGG 0.374959 1:-25862034 None:intergenic
ATCGACTGGTCTTCTTCCTT+CGG 0.376420 1:-25858312 None:intergenic
AACGGTGGGAAAACAAATTC+AGG 0.377594 1:+25857248 MsG0180001711.01.T01:CDS
AATCAAAATATGATGGTGTT+AGG 0.379885 1:-25861426 None:intergenic
CCCATTTCTATGCCACTTGA+AGG 0.382899 1:+25854862 MsG0180001711.01.T01:CDS
TTAGGTGATTGTGTTGATTT+GGG 0.385723 1:+25862132 MsG0180001711.01.T01:three_prime_UTR
TAACCAAAACCGGTTTGAAA+TGG 0.386324 1:+25858603 MsG0180001711.01.T01:CDS
GCAAAGACTGAACATTCTTC+TGG 0.387326 1:+25858385 MsG0180001711.01.T01:CDS
CGAACTAAACCAGTTATACT+TGG 0.389762 1:+25862171 MsG0180001711.01.T01:three_prime_UTR
AAATACATCCCACACTGAAA+TGG 0.391049 1:+25857214 MsG0180001711.01.T01:CDS
CGTGCACGAAATTCTGAGTA+TGG 0.391898 1:+25861017 MsG0180001711.01.T01:CDS
ACAGATTAGTTCTGTTTAAC+CGG 0.395301 1:+25862401 MsG0180001711.01.T01:three_prime_UTR
GACATGCCATTAACCAAAAC+CGG 0.398101 1:+25858593 MsG0180001711.01.T01:CDS
TTGGTTCTCCAAGGTTCCTA+TGG 0.398407 1:-25860242 None:intergenic
CCTGAAAGAGGAGCTGATAA+AGG 0.399892 1:+25858919 MsG0180001711.01.T01:CDS
GTTTCTCATCGTTGATATCA+AGG 0.404605 1:-25860093 None:intergenic
CCACCAGAAACAGTTCTGAT+AGG 0.414129 1:-25859563 None:intergenic
GTGATGTCACGTGGTTTACC+AGG 0.414225 1:+25854945 MsG0180001711.01.T01:CDS
CCACCACCCTTCTCTTGCTT+AGG 0.415701 1:-25859689 None:intergenic
AAGAATCACAACTCAGCTAC+TGG 0.415755 1:+25861209 MsG0180001711.01.T01:CDS
AGCATGCTTGCAACTTCTAT+AGG 0.416620 1:-25862594 None:intergenic
GCATGCTTGCAACTTCTATA+GGG 0.416993 1:-25862593 None:intergenic
TTTGCACGTGCTGTTGCTGC+AGG 0.417654 1:+25856879 MsG0180001711.01.T01:CDS
TATGCTTCTATAGGTTTGTT+CGG 0.418446 1:+25855562 MsG0180001711.01.T01:intron
CTCATCATGGATTCTCCCCA+TGG 0.420344 1:+25858008 MsG0180001711.01.T01:CDS
TCAAGACCTCCAACCTTGTA+AGG 0.420661 1:-25856305 None:intergenic
TGCTCAAGATCAAATGGATA+AGG 0.428238 1:+25854886 MsG0180001711.01.T01:CDS
CAACATCTTAGATCTTGGTT+TGG 0.430532 1:-25859043 None:intergenic
AAGAATCACACTACCTTCAT+TGG 0.433393 1:-25861282 None:intergenic
CCCTACTATCCGACTTATCC+AGG 0.434192 1:+25858091 MsG0180001711.01.T01:CDS
TGTTTCTTTGTTTGCAGTGA+TGG 0.434867 1:-25859452 None:intergenic
CGTGCTTCATCCAATGGACT+AGG 0.435666 1:-25859153 None:intergenic
CACTTGTGATTGGTTCTCCA+AGG 0.436342 1:-25860251 None:intergenic
GGTACGCCTTCGACTGCATA+TGG 0.437770 1:-25858070 None:intergenic
CAATACTGATTCCGAAAATT+GGG 0.438108 1:+25858219 MsG0180001711.01.T01:CDS
AATATAATATCAACATGTAT+TGG 0.440200 1:+25862459 MsG0180001711.01.T01:three_prime_UTR
GAGAAGACACAGAAGCTTAG+TGG 0.447249 1:+25859932 MsG0180001711.01.T01:CDS
ATTGTTCTTGTGCCTGAGAA+TGG 0.448018 1:+25854920 MsG0180001711.01.T01:CDS
AGGGAATCTTTGGAAGGGTA+AGG 0.449155 1:-25859543 None:intergenic
AATTCAATCAATTAAGTCGC+TGG 0.450958 1:-25862498 None:intergenic
TTCTGAGTCCATTTCAGTGT+GGG 0.450980 1:-25857222 None:intergenic
GAAGAGGCAATTGCAATTCA+AGG 0.453910 1:+25855648 MsG0180001711.01.T01:CDS
GTAGAGAAGTCTGCACGATT+AGG 0.454317 1:-25857188 None:intergenic
CTTTGTTTGCAGTGATGGCA+TGG 0.455953 1:-25859447 None:intergenic
ATACGTGCTTCACTTGTGAT+TGG 0.456390 1:-25860261 None:intergenic
CCTTCAAGTGGCATAGAAAT+GGG 0.457201 1:-25854862 None:intergenic
GCACCTTCTGAATTCATAGA+AGG 0.457846 1:-25859962 None:intergenic
TGGAACACTGGCAAAGCACC+TGG 0.458080 1:-25858046 None:intergenic
GAAGGCTGCTCAAGATCAAA+TGG 0.458794 1:+25854880 MsG0180001711.01.T01:CDS
GGAAATAATTCCATAGGGAT+TGG 0.461155 1:+25855669 MsG0180001711.01.T01:CDS
ACAAAGGGCCATTGGAGCTC+AGG 0.461912 1:-25861768 None:intergenic
ATATTCTCAAGGTTCTACTT+TGG 0.462744 1:+25860986 MsG0180001711.01.T01:CDS
TTCCAAAATTATTTATTGAA+AGG 0.463711 1:+25858556 MsG0180001711.01.T01:CDS
GATTTGGTCATAACTGTGAA+TGG 0.465222 1:+25854806 MsG0180001711.01.T01:CDS
ACTTTGATCAGCATTTAGTC+GGG 0.465297 1:-25858158 None:intergenic
CAAGGTTCTACTTTGGAAGA+TGG 0.467240 1:+25860993 MsG0180001711.01.T01:CDS
ATTGACCTTGAATATTAGCT+TGG 0.467631 1:-25857982 None:intergenic
AAGTAGAACCTTGAGAATAT+GGG 0.468607 1:-25860983 None:intergenic
GGAAACCAAGCTAATATTCA+AGG 0.469213 1:+25857977 MsG0180001711.01.T01:intron
TACTTTGATCAGCATTTAGT+CGG 0.469913 1:-25858159 None:intergenic
TCAGCTAGACAAAGGGCCAT+TGG 0.470944 1:-25861776 None:intergenic
AGATGACAAAGATAAAGAAA+TGG 0.471735 1:+25860147 MsG0180001711.01.T01:CDS
GGAAGATATAAAACGTATAG+AGG 0.473176 1:+25859352 MsG0180001711.01.T01:CDS
AGAAAGTAAATTCCTCAAAG+TGG 0.473440 1:-25861468 None:intergenic
ACAACAGTCTTATCAATCAT+AGG 0.474737 1:-25860040 None:intergenic
AAGATCTAAGATGTTGGATA+AGG 0.475169 1:+25859050 MsG0180001711.01.T01:CDS
TCCTGGATAAGTCGGATAGT+AGG 0.475381 1:-25858092 None:intergenic
AAACAAGTGGAAAGCAATGA+AGG 0.479950 1:+25855793 MsG0180001711.01.T01:CDS
AGAAGTGATTCTGCTATTTG+AGG 0.480061 1:+25861699 MsG0180001711.01.T01:three_prime_UTR
TAAAGCACCTCCCACGAGCT+TGG 0.483432 1:+25861040 MsG0180001711.01.T01:CDS
ATTCAAGGAAATAATTCCAT+AGG 0.484407 1:+25855663 MsG0180001711.01.T01:CDS
TGGAAGGGTAAGGATGATCT+TGG 0.485146 1:-25859533 None:intergenic
GCAGCCAGGTTGTCCGCCTA+TGG 0.485231 1:+25858129 MsG0180001711.01.T01:CDS
AGCTTGGAAACTACATCAAT+CGG 0.485272 1:+25861056 MsG0180001711.01.T01:CDS
GTTATGAAGACACACCTTTG+AGG 0.485989 1:-25860284 None:intergenic
AAAGATCCTTTAGATTTGAC+TGG 0.486545 1:+25858667 MsG0180001711.01.T01:CDS
TAGTTAAACCACGGAGCTCT+AGG 0.487681 1:+25859792 MsG0180001711.01.T01:CDS
ACTGCCAGCACTCAGTCTGC+TGG 0.488091 1:-25859615 None:intergenic
TTAAACAGAACTAATCTGTC+TGG 0.488115 1:-25862397 None:intergenic
AGACCGTTGGGCCAATAAGA+AGG 0.489549 1:+25859115 MsG0180001711.01.T01:CDS
TTGTACTGCTGTCTGTGCAC+TGG 0.490019 1:+25860192 MsG0180001711.01.T01:CDS
GAAAGCAGTTGTTCCTTACA+AGG 0.498826 1:+25856292 MsG0180001711.01.T01:CDS
GGCAACAAGCTCAATTCAGC+TGG 0.500888 1:-25858898 None:intergenic
AACAGTGCATTTATGCAGCC+AGG 0.501107 1:+25858115 MsG0180001711.01.T01:CDS
TATACACGTTCCAGTATCTC+AGG 0.501233 1:-25855597 None:intergenic
TCAGATGTGGCTGCTGTCAA+TGG 0.501499 1:+25858706 MsG0180001711.01.T01:CDS
ACTTACAGTGCCAATCCCTA+TGG 0.501968 1:-25855679 None:intergenic
CATTGGGGTCACTAGTTCAC+CGG 0.504870 1:-25862420 None:intergenic
TGCAAGCATGCTTCACAGAC+GGG 0.504970 1:+25862605 MsG0180001711.01.T01:three_prime_UTR
CTGAAAGAGGAGCTGATAAA+GGG 0.505391 1:+25858920 MsG0180001711.01.T01:CDS
ACCGAATAAACCTAGTCCAT+TGG 0.505979 1:+25859143 MsG0180001711.01.T01:CDS
AATGAACTCTTCAACAAGGT+TGG 0.506439 1:+25853971 None:intergenic
AAATGTAGGCGGTTCTTCAC+AGG 0.507600 1:+25858987 MsG0180001711.01.T01:CDS
GAGAGGGAAGGTTTACAGAC+TGG 0.508456 1:+25858286 MsG0180001711.01.T01:CDS
TGGCCTATTCATTCTCTCCC+AGG 0.508548 1:+25858028 MsG0180001711.01.T01:CDS
TTGAGCTTGTTGCCTGAAAG+AGG 0.509072 1:+25858907 MsG0180001711.01.T01:CDS
GTGACATCACATCCATTCTC+AGG 0.509497 1:-25854932 None:intergenic
TGAGGATTCTCATTTACCTC+GGG 0.511001 1:-25861137 None:intergenic
GCCAATGAAATTGGAGCGAA+TGG 0.511612 1:+25861254 MsG0180001711.01.T01:CDS
CTATCAGAACTACTTGGTGT+AGG 0.513355 1:-25859087 None:intergenic
CGTGCTCGTGCTTCATCCAA+TGG 0.516240 1:-25859159 None:intergenic
AATGATCCAGTAAATATTGA+GGG 0.517326 1:+25858811 MsG0180001711.01.T01:CDS
GACCGTTGGGCCAATAAGAA+GGG 0.517785 1:+25859116 MsG0180001711.01.T01:CDS
TGGTTCTCCAAGGTTCCTAT+GGG 0.517790 1:-25860241 None:intergenic
CATAACTGTGAATGGAAAGA+AGG 0.518280 1:+25854814 MsG0180001711.01.T01:CDS
ACCCCTTCTTATTGGCCCAA+CGG 0.519584 1:-25859118 None:intergenic
TAGGACAATTTCAAGGACTA+AGG 0.519801 1:+25859811 MsG0180001711.01.T01:CDS
CGCCTTCGACTGCATATGGA+TGG 0.520970 1:-25858066 None:intergenic
GCGAATGGTTCCACCAATGA+AGG 0.521501 1:+25861269 MsG0180001711.01.T01:CDS
GCTCAAGATCAAATGGATAA+GGG 0.523028 1:+25854887 MsG0180001711.01.T01:CDS
CATAACAAATCAAAATATGA+TGG 0.523411 1:-25861433 None:intergenic
TTTACGTCTGTCTGATCGAC+TGG 0.523536 1:-25858326 None:intergenic
GCTTCGAAACGGCGATAACA+AGG 0.525377 1:-25861642 None:intergenic
TCCTCCATAGGCGGACAACC+TGG 0.526889 1:-25858133 None:intergenic
CCCAATGAAGTAATTTCAAG+TGG 0.527275 1:+25862436 MsG0180001711.01.T01:three_prime_UTR
CCTGGATAAGTCGGATAGTA+GGG 0.528333 1:-25858091 None:intergenic
TGAAAATTTGTGAATGGTCA+CGG 0.529827 1:-25861728 None:intergenic
CACCAGAAACAGTTCTGATA+GGG 0.533084 1:-25859562 None:intergenic
TATGGTACCCATAGGAACCT+TGG 0.533109 1:+25860234 MsG0180001711.01.T01:CDS
GATTAAGGAGGATAGTAATG+TGG 0.534555 1:+25856268 MsG0180001711.01.T01:CDS
CAATGATCCAGTAAATATTG+AGG 0.535175 1:+25858810 MsG0180001711.01.T01:CDS
GCACCTGGGAGAGAATGAAT+AGG 0.537417 1:-25858031 None:intergenic
TTCGGTGAGTCCTTCACCTG+AGG 0.539668 1:-25861155 None:intergenic
AATCACACTACCTTCATTGG+TGG 0.540126 1:-25861279 None:intergenic
AACCTTGAGAATATGGGGTG+CGG 0.540426 1:-25860977 None:intergenic
TGCTTAGGTTCATGCAGAAG+AGG 0.540945 1:-25859674 None:intergenic
GGAGCTCTAGGACAATTTCA+AGG 0.540976 1:+25859804 MsG0180001711.01.T01:CDS
TCGACACAGAAGACATTCCA+TGG 0.541792 1:+25858183 MsG0180001711.01.T01:CDS
GGGAGAGAATGAATAGGCCA+TGG 0.542238 1:-25858025 None:intergenic
AGTTCCCGAATGAAGGAAAA+CGG 0.542855 1:+25858857 MsG0180001711.01.T01:CDS
CCTATCAGAACTGTTTCTGG+TGG 0.542960 1:+25859563 MsG0180001711.01.T01:CDS
ACGTGACACTTATAAAGTAA+AGG 0.543431 1:-25861876 None:intergenic
CCATTGGAGCTCAGGAAAAG+AGG 0.544156 1:-25861760 None:intergenic
TTCAAGGAAATAATTCCATA+GGG 0.544467 1:+25855664 MsG0180001711.01.T01:CDS
ACGTATAGAGGCTTTAAAGA+AGG 0.544709 1:+25859364 MsG0180001711.01.T01:CDS
ACCTTGAGAATATGGGGTGC+GGG 0.545773 1:-25860976 None:intergenic
CAAACCAAGATCTAAGATGT+TGG 0.546643 1:+25859044 MsG0180001711.01.T01:CDS
AAAATGCAGGCCCAAAATGT+AGG 0.547274 1:+25858973 MsG0180001711.01.T01:CDS
TCTCGGCTGTTGCTTCGAAA+CGG 0.548968 1:-25861653 None:intergenic
TGATGTAGTTTCCAAGCTCG+TGG 0.550135 1:-25861051 None:intergenic
GACTCCGAGTTCCCGAATGA+AGG 0.550593 1:+25858850 MsG0180001711.01.T01:CDS
TCTCCAGGACTCTCAAAACC+TGG 0.550815 1:-25856818 None:intergenic
AAGAAGGAGAAAATTGCCTC+AGG 0.552161 1:+25854830 MsG0180001711.01.T01:CDS
TGGGGTGCGGGATGTTTCCT+CGG 0.554213 1:-25860964 None:intergenic
GACTTACCAGTCAAATCTAA+AGG 0.554520 1:-25858673 None:intergenic
AAACTTTGATCCTTTATGCA+CGG 0.554780 1:-25859498 None:intergenic
CGAGGTAAATGAGAATCCTC+AGG 0.557311 1:+25861139 MsG0180001711.01.T01:CDS
ACACCTTTCGATAGTTCCCC+TGG 0.558995 1:-25854963 None:intergenic
GAACCGACTTACGTGTCTCC+AGG 0.559003 1:-25856833 None:intergenic
AGAGCTCCGTGGTTTAACTA+AGG 0.560859 1:-25859789 None:intergenic
CTTCTCCCCTCTGAGAGCCA+TGG 0.561875 1:-25862658 None:intergenic
CTGAGGATTCTCATTTACCT+CGG 0.562427 1:-25861138 None:intergenic
AAGACTGTTGTGATGCTTGA+GGG 0.563067 1:+25860052 MsG0180001711.01.T01:CDS
GATCTTGAGCAGCCTTCAAG+TGG 0.564742 1:-25854874 None:intergenic
TGCACTAGACTACAAAATGC+AGG 0.565964 1:+25858960 MsG0180001711.01.T01:CDS
GGATGAAATGGATATAGAGA+GGG 0.567513 1:+25858270 MsG0180001711.01.T01:CDS
GCACTGTTTCCTGGATAAGT+CGG 0.567853 1:-25858100 None:intergenic
CTCCCCTCTGAGAGCCATGG+TGG 0.568945 1:-25862655 None:intergenic
TGAAATCTTACAAATTGAAG+AGG 0.569859 1:+25855632 MsG0180001711.01.T01:CDS
TTTCTCATCGTTGATATCAA+GGG 0.570208 1:-25860092 None:intergenic
AAGCCACCATGGCTCTCAGA+GGG 0.570668 1:+25862652 MsG0180001711.01.T01:three_prime_UTR
GAATGTTACCTAGTTCTAGT+TGG 0.570813 1:-25854017 None:intergenic
GGAAACTACATCAATCGGTA+TGG 0.573073 1:+25861061 MsG0180001711.01.T01:CDS
GAAAGCATGAGAGTGGCCTA+TGG 0.573218 1:+25857138 MsG0180001711.01.T01:CDS
AGGTGAAGGACTCACCGAAA+GGG 0.574266 1:+25861159 MsG0180001711.01.T01:CDS
TCTGATAGGGAATCTTTGGA+AGG 0.574354 1:-25859549 None:intergenic
AGGATGAAATGGATATAGAG+AGG 0.574373 1:+25858269 MsG0180001711.01.T01:CDS
TTTAGTCGGGGATCCTCCAT+AGG 0.574800 1:-25858145 None:intergenic
AAAACCAGCAGACTGAGTGC+TGG 0.575311 1:+25859611 MsG0180001711.01.T01:CDS
GTACATTGTAGTTTATGATG+AGG 0.575431 1:-25862347 None:intergenic
GAAAGTAAATTCCTCAAAGT+GGG 0.576384 1:-25861467 None:intergenic
CGGGTAAGGCATCTTTGAAG+AGG 0.578595 1:+25858485 MsG0180001711.01.T01:CDS
GCATGAACCTAAGCAAGAGA+AGG 0.580604 1:+25859682 MsG0180001711.01.T01:CDS
AGAAAACCAAATAAAACAAG+TGG 0.581755 1:+25855780 MsG0180001711.01.T01:CDS
GCCAGGTTGTCCGCCTATGG+AGG 0.582828 1:+25858132 MsG0180001711.01.T01:CDS
GTGAACTTCTTCGGTTTCAG+TGG 0.583630 1:-25858431 None:intergenic
GGAGAGAATGAATAGGCCAT+GGG 0.584111 1:-25858024 None:intergenic
GAGCACACGTGTCTGACACC+AGG 0.585272 1:+25861093 MsG0180001711.01.T01:CDS
GATGTAGTTTCCAAGCTCGT+GGG 0.585892 1:-25861050 None:intergenic
ACTGCATATGGATGGAACAC+TGG 0.586089 1:-25858058 None:intergenic
ATTGCCGTGTCTATTATCCA+TGG 0.587443 1:-25858200 None:intergenic
TGGTGGTGCAAACAATCCTA+AGG 0.589944 1:+25859706 MsG0180001711.01.T01:CDS
ACAGCAGCCACATCTGATGA+AGG 0.590451 1:-25858700 None:intergenic
AACTAAGGAAGTCGGACGAA+TGG 0.590497 1:-25859774 None:intergenic
AAGCTTCGATTTCAAGCCAT+AGG 0.590742 1:-25857154 None:intergenic
AGAATCACAACTCAGCTACT+GGG 0.592893 1:+25861210 MsG0180001711.01.T01:CDS
CCTAAGCAAGAGAAGGGTGG+TGG 0.593232 1:+25859689 MsG0180001711.01.T01:CDS
TTGCAAGCATGCTTCACAGA+CGG 0.597444 1:+25862604 MsG0180001711.01.T01:three_prime_UTR
AAGAAACATACGGAGGACAT+TGG 0.599203 1:+25858527 MsG0180001711.01.T01:CDS
TCAGCAAATGACATCAAAGC+CGG 0.600657 1:-25856921 None:intergenic
GACAAAAGAGAATCGCTGCT+AGG 0.600959 1:+25859390 MsG0180001711.01.T01:CDS
AAATGACATCAAAGCCGGTA+TGG 0.601021 1:-25856916 None:intergenic
AAATGAGAATCCTCAGGTGA+AGG 0.601096 1:+25861145 MsG0180001711.01.T01:CDS
TTCCATCCATATGCAGTCGA+AGG 0.602144 1:+25858064 MsG0180001711.01.T01:CDS
CTCAGGAAGGAAGATTAAGG+AGG 0.603054 1:+25856256 MsG0180001711.01.T01:intron
TTTCTGAGTCCATTTCAGTG+TGG 0.604849 1:-25857223 None:intergenic
TCGGTTCTGCAGAAAGAGCA+AGG 0.606081 1:+25856849 MsG0180001711.01.T01:CDS
CATGAACCTAAGCAAGAGAA+GGG 0.607805 1:+25859683 MsG0180001711.01.T01:CDS
AGTGAAGCACGTATCCTCAA+AGG 0.609556 1:+25860270 MsG0180001711.01.T01:CDS
GTCACATCCTTCATCAGATG+TGG 0.610196 1:+25858693 MsG0180001711.01.T01:CDS
CTGATAGGGAATCTTTGGAA+GGG 0.610358 1:-25859548 None:intergenic
AACAAGTGGAAAGCAATGAA+GGG 0.611055 1:+25855794 MsG0180001711.01.T01:CDS
TGTGAATGATGACTCAATCA+TGG 0.612634 1:+25858774 MsG0180001711.01.T01:CDS
ATCAACGATGAGAAACCAAG+AGG 0.613605 1:+25860100 MsG0180001711.01.T01:CDS
CAGGTGAAGGACTCACCGAA+AGG 0.614742 1:+25861158 MsG0180001711.01.T01:CDS
CACTTGAAATTACTTCATTG+GGG 0.615237 1:-25862435 None:intergenic
AGAACAAATATGGTACCCAT+AGG 0.615784 1:+25860226 MsG0180001711.01.T01:CDS
ATGCCTTCTATGAATTCAGA+AGG 0.616561 1:+25859959 MsG0180001711.01.T01:CDS
AGCTCACACCAACTAGAACT+AGG 0.617680 1:+25854009 MsG0180001711.01.T01:CDS
CGAACAAGACCAAATACTGT+AGG 0.620633 1:+25862035 MsG0180001711.01.T01:three_prime_UTR
AATTTCATCTCTATCATCAG+TGG 0.620734 1:-25860017 None:intergenic
TCAACGATGAGAAACCAAGA+GGG 0.623201 1:+25860101 MsG0180001711.01.T01:CDS
GAGGTTGAATTCAACTGACA+AGG 0.623706 1:+25858504 MsG0180001711.01.T01:CDS
TCCCGCACCCCATATTCTCA+AGG 0.624442 1:+25860975 MsG0180001711.01.T01:CDS
ACTCACCGAAAGGGTTAAGA+CGG 0.629491 1:+25861168 MsG0180001711.01.T01:CDS
CTTAAACATAGAAGCCACCA+TGG 0.630109 1:+25862641 MsG0180001711.01.T01:three_prime_UTR
ACCGTTGGGCCAATAAGAAG+GGG 0.632454 1:+25859117 MsG0180001711.01.T01:CDS
ATCTAGCAGTCACACTGCCG+AGG 0.633660 1:+25860947 MsG0180001711.01.T01:CDS
CTTTGATCAGCATTTAGTCG+GGG 0.633784 1:-25858157 None:intergenic
TGATGTCACGTGGTTTACCA+GGG 0.635405 1:+25854946 MsG0180001711.01.T01:CDS
TGGAAAAGAAAGCATGAGAG+TGG 0.636097 1:+25857131 MsG0180001711.01.T01:CDS
AGTAGAACCTTGAGAATATG+GGG 0.636460 1:-25860982 None:intergenic
GTAGTTTCCAAGCTCGTGGG+AGG 0.639898 1:-25861047 None:intergenic
ACTGACAAGGAAGAAACATA+CGG 0.640382 1:+25858517 MsG0180001711.01.T01:CDS
CAGCAATGAACTCTTCAACA+AGG 0.641291 1:+25853967 None:intergenic
TAAGACTGTTGTGATGCTTG+AGG 0.642521 1:+25860051 MsG0180001711.01.T01:CDS
TGAGGGAAATGCTATTGACA+TGG 0.646419 1:+25858828 MsG0180001711.01.T01:CDS
GAAATGGATATAGAGAGGGA+AGG 0.651048 1:+25858274 MsG0180001711.01.T01:CDS
TCTGCAGAAAGAGCAAGGAA+TGG 0.655915 1:+25856854 MsG0180001711.01.T01:CDS
CATTCCATGGATAATAGACA+CGG 0.656178 1:+25858196 MsG0180001711.01.T01:CDS
TGGACTCAGAAAGTAACGGT+GGG 0.657200 1:+25857234 MsG0180001711.01.T01:CDS
ATGGACTCAGAAAGTAACGG+TGG 0.657320 1:+25857233 MsG0180001711.01.T01:CDS
GAAATTGTCCTAGAGCTCCG+TGG 0.662085 1:-25859800 None:intergenic
TCGTTGATATCAAGGGCACA+AGG 0.664969 1:-25860085 None:intergenic
GGAACACTGGCAAAGCACCT+GGG 0.665869 1:-25858045 None:intergenic
CAAGATCAAATGGATAAGGG+TGG 0.666245 1:+25854890 MsG0180001711.01.T01:CDS
AGTCCTGGAGACACGTAAGT+CGG 0.667114 1:+25856830 MsG0180001711.01.T01:CDS
AGTCGGGGATCCTCCATAGG+CGG 0.668800 1:-25858142 None:intergenic
CGTGGTTTAACTAAGGAAGT+CGG 0.669786 1:-25859782 None:intergenic
TTACCAGGGGAACTATCGAA+AGG 0.671985 1:+25854960 MsG0180001711.01.T01:CDS
CATACTCAGAATTTCGTGCA+CGG 0.675649 1:-25861016 None:intergenic
GTTTACAGACTGGAGACCGA+AGG 0.676522 1:+25858296 MsG0180001711.01.T01:CDS
AGACAGACGTAAATCTAGCA+CGG 0.677192 1:+25858336 MsG0180001711.01.T01:CDS
CGACTTCCTTAGTTAAACCA+CGG 0.680430 1:+25859783 MsG0180001711.01.T01:CDS
GAAGCCACCATGGCTCTCAG+AGG 0.680793 1:+25862651 MsG0180001711.01.T01:three_prime_UTR
GAACCTAAGCAAGAGAAGGG+TGG 0.688918 1:+25859686 MsG0180001711.01.T01:CDS
TACACTTGAGAAAATTCCCG+AGG 0.691658 1:+25861121 MsG0180001711.01.T01:CDS
ATGCAGGCCCAAAATGTAGG+CGG 0.696884 1:+25858976 MsG0180001711.01.T01:CDS
AAATGGGCTGAGCAAACCTG+AGG 0.708672 1:-25854846 None:intergenic
GAAATGGACTCAGAAAGTAA+CGG 0.722926 1:+25857230 MsG0180001711.01.T01:CDS
AGCCACCATGGCTCTCAGAG+GGG 0.724670 1:+25862653 MsG0180001711.01.T01:three_prime_UTR
AGAATGGATGTGATGTCACG+TGG 0.726374 1:+25854936 MsG0180001711.01.T01:CDS
GATGTCACGTGGTTTACCAG+GGG 0.727270 1:+25854947 MsG0180001711.01.T01:CDS
GAGAGAATGAATAGGCCATG+GGG 0.737460 1:-25858023 None:intergenic
GACAAGGAAGAAACATACGG+AGG 0.765301 1:+25858520 MsG0180001711.01.T01:CDS
GCTCTAGTATTATCACGACG+AGG 0.796052 1:+25862557 MsG0180001711.01.T01:three_prime_UTR
CAGACGTAAATCTAGCACGG+TGG 0.815638 1:+25858339 MsG0180001711.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTTATAAATAAAGTTAA+TGG - Chr1:25854079-25854098 None:intergenic 10.0%
!! TTCTATTATTTATAATAATC+AGG + Chr1:25859325-25859344 MsG0180001711.01.T01:intron 10.0%
!!! ATATAGATATTCAATTTTTA+TGG + Chr1:25861317-25861336 MsG0180001711.01.T01:exon 10.0%
!!! TTAGAATTTTTTTTTAACAA+AGG - Chr1:25862312-25862331 None:intergenic 10.0%
!! AAAAAATGAAAATTTGTGAA+TGG - Chr1:25861737-25861756 None:intergenic 15.0%
!! AAAATAATCTACATACATTA+AGG - Chr1:25857913-25857932 None:intergenic 15.0%
!! AAATAATCTACATACATTAA+GGG - Chr1:25857912-25857931 None:intergenic 15.0%
!! AATATAATATCAACATGTAT+TGG + Chr1:25862459-25862478 MsG0180001711.01.T01:three_prime_UTR 15.0%
!! TGATAAATCAATATAAGTTT+AGG - Chr1:25856334-25856353 None:intergenic 15.0%
!! TTCCAAAATTATTTATTGAA+AGG + Chr1:25858556-25858575 MsG0180001711.01.T01:CDS 15.0%
!!! AATTAGTCTATATTTTACAT+AGG + Chr1:25862517-25862536 MsG0180001711.01.T01:three_prime_UTR 15.0%
!!! ATTGCAAGATATATATTTTT+TGG + Chr1:25854115-25854134 MsG0180001711.01.T01:intron 15.0%
!!! ATTTTTTCATTTAGATTATC+TGG + Chr1:25862257-25862276 MsG0180001711.01.T01:three_prime_UTR 15.0%
!!! CATTTTCATTAGTTTAAATT+TGG + Chr1:25854497-25854516 MsG0180001711.01.T01:intron 15.0%
!!! TACAAAAACAAAAATCATTT+TGG - Chr1:25854459-25854478 None:intergenic 15.0%
!!! TCTAATTTTTTCATATTTCA+GGG + Chr1:25857082-25857101 MsG0180001711.01.T01:intron 15.0%
!!! TTAAATTGATTTAAGTTCTT+TGG + Chr1:25854542-25854561 MsG0180001711.01.T01:intron 15.0%
!!! TTCCAAAATCTAAAATATTT+AGG + Chr1:25862114-25862133 MsG0180001711.01.T01:three_prime_UTR 15.0%
!!! TTCTAATTTTTTCATATTTC+AGG + Chr1:25857081-25857100 MsG0180001711.01.T01:intron 15.0%
!!! TTTTTTCTTTTATAGATTAG+TGG + Chr1:25857523-25857542 MsG0180001711.01.T01:intron 15.0%
!! AAATGAATGAGTGAAAAAAT+TGG + Chr1:25862079-25862098 MsG0180001711.01.T01:three_prime_UTR 20.0%
!! AAGTCACATAATCTTTATAA+TGG + Chr1:25857748-25857767 MsG0180001711.01.T01:intron 20.0%
!! AATAATCTACATACATTAAG+GGG - Chr1:25857911-25857930 None:intergenic 20.0%
!! AATGAATGAGTGAAAAAATT+GGG + Chr1:25862080-25862099 MsG0180001711.01.T01:three_prime_UTR 20.0%
!! ACCAATGATTAAGTAAAAAA+TGG - Chr1:25856994-25857013 None:intergenic 20.0%
!! ACTATGTGAAAGAATTATTA+AGG + Chr1:25857633-25857652 MsG0180001711.01.T01:intron 20.0%
!! ATATATTATCTTCCAAATTC+AGG + Chr1:25860884-25860903 MsG0180001711.01.T01:intron 20.0%
!! CAAATTCTATATATAAGCAT+TGG - Chr1:25860649-25860668 None:intergenic 20.0%
!! CAATGCTTATATATAGAATT+TGG + Chr1:25860647-25860666 MsG0180001711.01.T01:intron 20.0%
!! CATAACAAATCAAAATATGA+TGG - Chr1:25861436-25861455 None:intergenic 20.0%
!! CTAAATGTGAAAATTAAGTT+TGG - Chr1:25857418-25857437 None:intergenic 20.0%
!! CTTATTTAGATAGATACTAA+TGG - Chr1:25861998-25862017 None:intergenic 20.0%
!! GAATGATCATTGATAAAAAA+AGG - Chr1:25861830-25861849 None:intergenic 20.0%
!! GACAAATAATATGCATTTAA+TGG - Chr1:25857047-25857066 None:intergenic 20.0%
!! TAAATTGTTAAAATTGCATC+AGG + Chr1:25860581-25860600 MsG0180001711.01.T01:intron 20.0%
!! TATGAACAATTTAATTGTTG+TGG - Chr1:25855733-25855752 None:intergenic 20.0%
!! TATTTATAATAATCAGGAAG+AGG + Chr1:25859331-25859350 MsG0180001711.01.T01:intron 20.0%
!! TGGATTAACAACTTAATTAA+GGG + Chr1:25855962-25855981 MsG0180001711.01.T01:intron 20.0%
!! TTGCTATGTAATTGATATTT+CGG - Chr1:25858369-25858388 None:intergenic 20.0%
!! TTGGATTAACAACTTAATTA+AGG + Chr1:25855961-25855980 MsG0180001711.01.T01:intron 20.0%
!! TTTATTTGAATTCTGTGTAT+GGG + Chr1:25860831-25860850 MsG0180001711.01.T01:intron 20.0%
!!! AACTTCAAAAACAAGTTTTA+AGG + Chr1:25858249-25858268 MsG0180001711.01.T01:CDS 20.0%
!!! AATCTATTTTTAGCTTTCAA+AGG - Chr1:25855443-25855462 None:intergenic 20.0%
!!! AATTTTCAAAGATATGCTTT+AGG - Chr1:25857327-25857346 None:intergenic 20.0%
!!! ACCATTTTTTACTTAATCAT+TGG + Chr1:25856990-25857009 MsG0180001711.01.T01:intron 20.0%
!!! ATAAGTTATAACTCTAAGAT+TGG + Chr1:25855471-25855490 MsG0180001711.01.T01:intron 20.0%
!!! ATTTCCTTATTTCTTAAACT+CGG - Chr1:25854626-25854645 None:intergenic 20.0%
!!! ATTTTCTACAAATGTAAAAG+TGG + Chr1:25856695-25856714 MsG0180001711.01.T01:intron 20.0%
!!! ATTTTTGTTTTTGTAACTAG+TGG + Chr1:25854464-25854483 MsG0180001711.01.T01:intron 20.0%
!!! CACCTAAATATTTTAGATTT+TGG - Chr1:25862119-25862138 None:intergenic 20.0%
!!! CACCTTTCAATAAATAATTT+TGG - Chr1:25858561-25858580 None:intergenic 20.0%
!!! GTTTTTTGTTTAATACAAGT+TGG - Chr1:25855897-25855916 None:intergenic 20.0%
!!! TATTCATTTTAACCTGAATT+TGG - Chr1:25860899-25860918 None:intergenic 20.0%
!!! TATTTGTTGATAATTCTTGT+TGG + Chr1:25855007-25855026 MsG0180001711.01.T01:intron 20.0%
!!! TTAATTTTCTATGCTTCTAT+AGG + Chr1:25855553-25855572 MsG0180001711.01.T01:intron 20.0%
!!! TTTTAGACCTTTAAGTTTAA+CGG + Chr1:25860756-25860775 MsG0180001711.01.T01:intron 20.0%
! AAAAACAAAAAACCTTCACA+TGG - Chr1:25857494-25857513 None:intergenic 25.0%
! AAATAAGGAAATTTACTGAG+GGG + Chr1:25854634-25854653 MsG0180001711.01.T01:intron 25.0%
! AAATATCAAAGCAACAAATC+AGG - Chr1:25854762-25854781 None:intergenic 25.0%
! AAATGACTTATATCTAGCAT+AGG + Chr1:25854271-25854290 MsG0180001711.01.T01:intron 25.0%
! AACTAGAGTAGATTTATCAT+TGG + Chr1:25860304-25860323 MsG0180001711.01.T01:intron 25.0%
! AAGCAACAAAATAGACTTAA+AGG - Chr1:25855374-25855393 None:intergenic 25.0%
! AATGATCCAGTAAATATTGA+GGG + Chr1:25858811-25858830 MsG0180001711.01.T01:CDS 25.0%
! AGAAAACCAAATAAAACAAG+TGG + Chr1:25855780-25855799 MsG0180001711.01.T01:CDS 25.0%
! AGAAATAAGGAAATTTACTG+AGG + Chr1:25854632-25854651 MsG0180001711.01.T01:intron 25.0%
! AGAGAAAAATTCTATGAAAG+TGG - Chr1:25860622-25860641 None:intergenic 25.0%
! AGATGACAAAGATAAAGAAA+TGG + Chr1:25860147-25860166 MsG0180001711.01.T01:CDS 25.0%
! AGCAACAAAATAGACTTAAA+GGG - Chr1:25855373-25855392 None:intergenic 25.0%
! AGTCTTACCAATAATTGTTT+CGG + Chr1:25854170-25854189 MsG0180001711.01.T01:intron 25.0%
! ATAAGCACTTATCATATAAG+TGG + Chr1:25855993-25856012 MsG0180001711.01.T01:intron 25.0%
! ATAATCTACATACATTAAGG+GGG - Chr1:25857910-25857929 None:intergenic 25.0%
! ATTCAAGGAAATAATTCCAT+AGG + Chr1:25855663-25855682 MsG0180001711.01.T01:CDS 25.0%
! ATTTGAAGATGTGTTTCATA+TGG + Chr1:25857937-25857956 MsG0180001711.01.T01:intron 25.0%
! CAAACCTAATTTACACAAAA+GGG - Chr1:25854787-25854806 None:intergenic 25.0%
! CTTAATCCATTTATGAAAGT+AGG - Chr1:25857663-25857682 None:intergenic 25.0%
! GAAACTATTATTGATATGGT+TGG + Chr1:25856568-25856587 MsG0180001711.01.T01:intron 25.0%
! GAAATAAGGAAATTTACTGA+GGG + Chr1:25854633-25854652 MsG0180001711.01.T01:intron 25.0%
! GATATTTCGACAAATGAAAA+TGG - Chr1:25855338-25855357 None:intergenic 25.0%
! GTTATATATCCTTCAGTAAT+CGG + Chr1:25854591-25854610 MsG0180001711.01.T01:intron 25.0%
! GTTTATTTGAATTCTGTGTA+TGG + Chr1:25860830-25860849 MsG0180001711.01.T01:intron 25.0%
! TAATTCTTGTTGGCATATAT+TGG + Chr1:25855017-25855036 MsG0180001711.01.T01:intron 25.0%
! TAGAAGTTTGTCAATTTCAT+AGG + Chr1:25857808-25857827 MsG0180001711.01.T01:intron 25.0%
! TATGATGAATAAAGTGACAT+TGG + Chr1:25856632-25856651 MsG0180001711.01.T01:intron 25.0%
! TCAAACCTAATTTACACAAA+AGG - Chr1:25854788-25854807 None:intergenic 25.0%
! TCAAATAACTTAATCACAAC+AGG + Chr1:25856210-25856229 MsG0180001711.01.T01:intron 25.0%
! TCATGCAACAAATTCAAATT+GGG + Chr1:25854307-25854326 MsG0180001711.01.T01:intron 25.0%
! TCGAGAAACTATTATTGATA+TGG + Chr1:25856564-25856583 MsG0180001711.01.T01:intron 25.0%
! TCTTAGTACTTCAGTTAATT+TGG + Chr1:25860860-25860879 MsG0180001711.01.T01:intron 25.0%
! TGAAATCTTACAAATTGAAG+AGG + Chr1:25855632-25855651 MsG0180001711.01.T01:CDS 25.0%
! TGTGTAAATTAGGTTTGATT+TGG + Chr1:25854790-25854809 MsG0180001711.01.T01:intron 25.0%
! TTATTCATCATAAAGCAGTT+GGG - Chr1:25856624-25856643 None:intergenic 25.0%
! TTCAAGGAAATAATTCCATA+GGG + Chr1:25855664-25855683 MsG0180001711.01.T01:CDS 25.0%
! TTCATCCTTAAGAACAAATA+TGG + Chr1:25860216-25860235 MsG0180001711.01.T01:CDS 25.0%
! TTTAGATTATCTGGTTGATT+AGG + Chr1:25862266-25862285 MsG0180001711.01.T01:three_prime_UTR 25.0%
! TTTATTCATCATAAAGCAGT+TGG - Chr1:25856625-25856644 None:intergenic 25.0%
!! AATCAAAATATGATGGTGTT+AGG - Chr1:25861429-25861448 None:intergenic 25.0%
!! ATGTTATTCAAACACTGATT+TGG + Chr1:25858732-25858751 MsG0180001711.01.T01:CDS 25.0%
!! TGTTTTCTATAGTTTATGCT+TGG + Chr1:25860509-25860528 MsG0180001711.01.T01:intron 25.0%
!! TTTAGGAAGTGACTAATTTT+TGG + Chr1:25854341-25854360 MsG0180001711.01.T01:intron 25.0%
!!! AACAAGTTTTAAGGATGAAA+TGG + Chr1:25858258-25858277 MsG0180001711.01.T01:CDS 25.0%
!!! ATTCTATATATAAGCATTGG+TGG - Chr1:25860646-25860665 None:intergenic 25.0%
!!! GAGTATAGAATTTTAGTTGA+TGG + Chr1:25856487-25856506 MsG0180001711.01.T01:intron 25.0%
!!! TGTTTTCAGCTTATTTCTAT+AGG - Chr1:25856116-25856135 None:intergenic 25.0%
!!! TTGTCGTTATCTTTTTTTCT+CGG - Chr1:25861673-25861692 None:intergenic 25.0%
!!! TTTATGGCACTTTCTAAAAT+AGG + Chr1:25861333-25861352 MsG0180001711.01.T01:three_prime_UTR 25.0%
!!! TTTGTTTAATACAAGTTGGT+TGG - Chr1:25855893-25855912 None:intergenic 25.0%
!!! TTTTTTCTATCAGAACTACT+TGG - Chr1:25859096-25859115 None:intergenic 25.0%
AAAAGCAACAAGTTCTCTTA+GGG - Chr1:25856236-25856255 None:intergenic 30.0%
AAACTTTGATCCTTTATGCA+CGG - Chr1:25859501-25859520 None:intergenic 30.0%
AAAGATCCTTTAGATTTGAC+TGG + Chr1:25858667-25858686 MsG0180001711.01.T01:CDS 30.0%
AAAGTAGAACCTTGAGAATA+TGG - Chr1:25860987-25861006 None:intergenic 30.0%
AAGTAGAACCTTGAGAATAT+GGG - Chr1:25860986-25861005 None:intergenic 30.0%
AATTAGCATAGCAACTGTAT+TGG + Chr1:25854569-25854588 MsG0180001711.01.T01:intron 30.0%
AATTCAATCAATTAAGTCGC+TGG - Chr1:25862501-25862520 None:intergenic 30.0%
AATTTCATCTCTATCATCAG+TGG - Chr1:25860020-25860039 None:intergenic 30.0%
ACAGGATAAAAAGAACAAAG+GGG + Chr1:25859005-25859024 MsG0180001711.01.T01:CDS 30.0%
ACGTGACACTTATAAAGTAA+AGG - Chr1:25861879-25861898 None:intergenic 30.0%
ACTCAGTTACAAGCAAATTA+AGG + Chr1:25859642-25859661 MsG0180001711.01.T01:CDS 30.0%
AGAAAGTAAATTCCTCAAAG+TGG - Chr1:25861471-25861490 None:intergenic 30.0%
AGTCAAATCTAAAGGATCTT+TGG - Chr1:25858668-25858687 None:intergenic 30.0%
ATAGTGTTACCTACAGTATT+TGG - Chr1:25862047-25862066 None:intergenic 30.0%
ATATTCTCAAGGTTCTACTT+TGG + Chr1:25860986-25861005 MsG0180001711.01.T01:CDS 30.0%
ATTCATCATTCATTACTCAC+TGG + Chr1:25857344-25857363 MsG0180001711.01.T01:intron 30.0%
ATTGACCTTGAATATTAGCT+TGG - Chr1:25857985-25858004 None:intergenic 30.0%
CAATGATCCAGTAAATATTG+AGG + Chr1:25858810-25858829 MsG0180001711.01.T01:CDS 30.0%
CACAGGATAAAAAGAACAAA+GGG + Chr1:25859004-25859023 MsG0180001711.01.T01:CDS 30.0%
CACTTGAAATTACTTCATTG+GGG - Chr1:25862438-25862457 None:intergenic 30.0%
CCACTTGAAATTACTTCATT+GGG - Chr1:25862439-25862458 None:intergenic 30.0%
CTTTGTACTAAATAGCGTAA+TGG - Chr1:25855104-25855123 None:intergenic 30.0%
GAAACCGAGTTTAAGAAATA+AGG + Chr1:25854619-25854638 MsG0180001711.01.T01:intron 30.0%
GAAAGTAAATTCCTCAAAGT+GGG - Chr1:25861470-25861489 None:intergenic 30.0%
GACATTTATAACCATACTCA+CGG - Chr1:25860401-25860420 None:intergenic 30.0%
GCTGAAATTCATAATCTGAT+TGG + Chr1:25855942-25855961 MsG0180001711.01.T01:intron 30.0%
GGAAGATATAAAACGTATAG+AGG + Chr1:25859352-25859371 MsG0180001711.01.T01:CDS 30.0%
GTACATTGTAGTTTATGATG+AGG - Chr1:25862350-25862369 None:intergenic 30.0%
GTAGAAAATTCATGTCTCTA+TGG + Chr1:25857111-25857130 MsG0180001711.01.T01:CDS 30.0%
GTCATGCAACAAATTCAAAT+TGG + Chr1:25854306-25854325 MsG0180001711.01.T01:intron 30.0%
TAAAAAGATCACATGCTGTT+AGG - Chr1:25860431-25860450 None:intergenic 30.0%
TACAATGTACCAACGTATAT+TGG + Chr1:25862360-25862379 MsG0180001711.01.T01:three_prime_UTR 30.0%
TACTTTGATCAGCATTTAGT+CGG - Chr1:25858162-25858181 None:intergenic 30.0%
TAGCCTCAAAACTCTAATAA+CGG - Chr1:25855257-25855276 None:intergenic 30.0%
TAGTTTATGATGAGGACTTT+AGG - Chr1:25862342-25862361 None:intergenic 30.0%
TCAATCACAGATTGCAAAAA+TGG - Chr1:25855191-25855210 None:intergenic 30.0%
TCACAGGATAAAAAGAACAA+AGG + Chr1:25859003-25859022 MsG0180001711.01.T01:CDS 30.0%
TCCACTTGAAATTACTTCAT+TGG - Chr1:25862440-25862459 None:intergenic 30.0%
TCGTTTGGTATTCTTTCTTA+TGG + Chr1:25855277-25855296 MsG0180001711.01.T01:intron 30.0%
TCTTTAATTGTCAAGTGCAT+TGG + Chr1:25854391-25854410 MsG0180001711.01.T01:intron 30.0%
TGAAAATTTGTGAATGGTCA+CGG - Chr1:25861731-25861750 None:intergenic 30.0%
TGAAATTCATTAAGTGCCAA+TGG + Chr1:25856525-25856544 MsG0180001711.01.T01:intron 30.0%
TGATAGTTCACTGAAAACAT+TGG + Chr1:25854719-25854738 MsG0180001711.01.T01:intron 30.0%
TTAAACAGAACTAATCTGTC+TGG - Chr1:25862400-25862419 None:intergenic 30.0%
TTATCCAACATCTTAGATCT+TGG - Chr1:25859051-25859070 None:intergenic 30.0%
TTGATCTTGACATCTGAATA+TGG + Chr1:25861576-25861595 MsG0180001711.01.T01:three_prime_UTR 30.0%
TTTACAAGATCAGAATTTGC+TGG - Chr1:25857286-25857305 None:intergenic 30.0%
TTTCTCATCGTTGATATCAA+GGG - Chr1:25860095-25860114 None:intergenic 30.0%
! AAGATCTAAGATGTTGGATA+AGG + Chr1:25859050-25859069 MsG0180001711.01.T01:CDS 30.0%
! ACAACAGTCTTATCAATCAT+AGG - Chr1:25860043-25860062 None:intergenic 30.0%
! ACAATATATAAGAGCATGAG+TGG + Chr1:25857720-25857739 MsG0180001711.01.T01:intron 30.0%
! ACCTTTAAGTTTAACGGTAT+TGG + Chr1:25860762-25860781 MsG0180001711.01.T01:intron 30.0%
! AGTTTCAATGTCCCAATTTT+CGG - Chr1:25858233-25858252 None:intergenic 30.0%
! ATTTTCCGTTTTCCTTCATT+CGG - Chr1:25858865-25858884 None:intergenic 30.0%
! CAATCTCTCATTTTCAAATC+CGG - Chr1:25854197-25854216 None:intergenic 30.0%
! CAATTTCATAGGTTTTTGTG+TGG + Chr1:25857819-25857838 MsG0180001711.01.T01:intron 30.0%
! GATATTCTGATTTTCAGTTC+TGG - Chr1:25859908-25859927 None:intergenic 30.0%
! GGTTTTCCTACTTTCATAAA+TGG + Chr1:25857654-25857673 MsG0180001711.01.T01:intron 30.0%
! TACTTTTGACAATGCAAAAC+AGG + Chr1:25856746-25856765 MsG0180001711.01.T01:intron 30.0%
! TATGCTTCTATAGGTTTGTT+CGG + Chr1:25855562-25855581 MsG0180001711.01.T01:intron 30.0%
! TTCTCCCTTTTGTGTAAATT+AGG + Chr1:25854780-25854799 MsG0180001711.01.T01:intron 30.0%
!! AATTTCACTTTTCTTCAGCA+AGG - Chr1:25859987-25860006 None:intergenic 30.0%
!! ACAGATTAGTTCTGTTTAAC+CGG + Chr1:25862401-25862420 MsG0180001711.01.T01:three_prime_UTR 30.0%
!! ATGAAAATGGACTACTAACA+TGG - Chr1:25855325-25855344 None:intergenic 30.0%
!! CAATACTGATTCCGAAAATT+GGG + Chr1:25858219-25858238 MsG0180001711.01.T01:CDS 30.0%
!! CTCTAGATTCTTTGAAGTAT+AGG - Chr1:25857471-25857490 None:intergenic 30.0%
!! GTTTTTCAACCAATATACGT+TGG - Chr1:25862372-25862391 None:intergenic 30.0%
!! TGAAAGTGGACTAATGTTTA+AGG - Chr1:25860608-25860627 None:intergenic 30.0%
!! TTAGGTGATTGTGTTGATTT+GGG + Chr1:25862132-25862151 MsG0180001711.01.T01:three_prime_UTR 30.0%
!! TTTAGGTGATTGTGTTGATT+TGG + Chr1:25862131-25862150 MsG0180001711.01.T01:three_prime_UTR 30.0%
!!! TCTGAACGTTCTGAAAATTT+TGG + Chr1:25857782-25857801 MsG0180001711.01.T01:intron 30.0%
!!! TGAGGGTTTTAAAGAATCAT+TGG - Chr1:25859591-25859610 None:intergenic 30.0%
!!! TGCTTTCCACTTGTTTTATT+TGG - Chr1:25855789-25855808 None:intergenic 30.0%
AAACAAGTGGAAAGCAATGA+AGG + Chr1:25855793-25855812 MsG0180001711.01.T01:CDS 35.0%
AAATACATCCCACACTGAAA+TGG + Chr1:25857214-25857233 MsG0180001711.01.T01:CDS 35.0%
AACAAGTGGAAAGCAATGAA+GGG + Chr1:25855794-25855813 MsG0180001711.01.T01:CDS 35.0%
AAGAATCACACTACCTTCAT+TGG - Chr1:25861285-25861304 None:intergenic 35.0%
ACTGACAAGGAAGAAACATA+CGG + Chr1:25858517-25858536 MsG0180001711.01.T01:CDS 35.0%
ACTTTGATCAGCATTTAGTC+GGG - Chr1:25858161-25858180 None:intergenic 35.0%
AGAACAAATATGGTACCCAT+AGG + Chr1:25860226-25860245 MsG0180001711.01.T01:CDS 35.0%
AGCTTGGAAACTACATCAAT+CGG + Chr1:25861056-25861075 MsG0180001711.01.T01:CDS 35.0%
AGGATGAAATGGATATAGAG+AGG + Chr1:25858269-25858288 MsG0180001711.01.T01:CDS 35.0%
AGTAGAACCTTGAGAATATG+GGG - Chr1:25860985-25861004 None:intergenic 35.0%
AGTTATTTGAGCTTATCGAC+TGG - Chr1:25856200-25856219 None:intergenic 35.0%
ATATGCATTTAATGGCCAGA+TGG - Chr1:25857039-25857058 None:intergenic 35.0%
ATGCCTTCTATGAATTCAGA+AGG + Chr1:25859959-25859978 MsG0180001711.01.T01:CDS 35.0%
CAACATCTTAGATCTTGGTT+TGG - Chr1:25859046-25859065 None:intergenic 35.0%
CAACTCAAACCAAGTATAAC+TGG - Chr1:25862183-25862202 None:intergenic 35.0%
CACAGATTTGTGAACTTCTT+CGG - Chr1:25858443-25858462 None:intergenic 35.0%
CATAACTGTGAATGGAAAGA+AGG + Chr1:25854814-25854833 MsG0180001711.01.T01:CDS 35.0%
CATTCCATGGATAATAGACA+CGG + Chr1:25858196-25858215 MsG0180001711.01.T01:CDS 35.0%
CCAAAAACTGAAGAAAGAGA+AGG + Chr1:25859215-25859234 MsG0180001711.01.T01:CDS 35.0%
CCCAATGAAGTAATTTCAAG+TGG + Chr1:25862436-25862455 MsG0180001711.01.T01:three_prime_UTR 35.0%
CGAACTAAACCAGTTATACT+TGG + Chr1:25862171-25862190 MsG0180001711.01.T01:three_prime_UTR 35.0%
CTAATCATAATCAGTCTGTG+TGG + Chr1:25856358-25856377 MsG0180001711.01.T01:intron 35.0%
CTGATAGAAAAAAGACCGTT+GGG + Chr1:25859103-25859122 MsG0180001711.01.T01:CDS 35.0%
GAAAAGCAACAAGTTCTCTT+AGG - Chr1:25856237-25856256 None:intergenic 35.0%
GACTTACCAGTCAAATCTAA+AGG - Chr1:25858676-25858695 None:intergenic 35.0%
GATTAAGGAGGATAGTAATG+TGG + Chr1:25856268-25856287 MsG0180001711.01.T01:CDS 35.0%
GCAACAAATTCAAATTGGGA+TGG + Chr1:25854311-25854330 MsG0180001711.01.T01:intron 35.0%
GCATTTCCCTCAATATTTAC+TGG - Chr1:25858820-25858839 None:intergenic 35.0%
GCCAATACCGTTAAACTTAA+AGG - Chr1:25860766-25860785 None:intergenic 35.0%
GCTCAAGATCAAATGGATAA+GGG + Chr1:25854887-25854906 MsG0180001711.01.T01:CDS 35.0%
GGAAAACAAATTCAGGTACA+TGG + Chr1:25857255-25857274 MsG0180001711.01.T01:intron 35.0%
GGAAACCAAGCTAATATTCA+AGG + Chr1:25857977-25857996 MsG0180001711.01.T01:intron 35.0%
GGAAATAATTCCATAGGGAT+TGG + Chr1:25855669-25855688 MsG0180001711.01.T01:CDS 35.0%
GGATGAAATGGATATAGAGA+GGG + Chr1:25858270-25858289 MsG0180001711.01.T01:CDS 35.0%
GGGTACCATATTTGTTCTTA+AGG - Chr1:25860224-25860243 None:intergenic 35.0%
GTCTCAATGATTGTTCGATT+CGG + Chr1:25854137-25854156 MsG0180001711.01.T01:intron 35.0%
GTTTCTCATCGTTGATATCA+AGG - Chr1:25860096-25860115 None:intergenic 35.0%
TAAGCGTAGAAAGTTGTTTG+AGG + Chr1:25857679-25857698 MsG0180001711.01.T01:intron 35.0%
TACCAATAATTGTTTCGGTC+CGG + Chr1:25854175-25854194 MsG0180001711.01.T01:intron 35.0%
TAGGACAATTTCAAGGACTA+AGG + Chr1:25859811-25859830 MsG0180001711.01.T01:CDS 35.0%
TCAGATCATGCCAATGAAAT+TGG + Chr1:25861245-25861264 MsG0180001711.01.T01:CDS 35.0%
TCTGATAGAAAAAAGACCGT+TGG + Chr1:25859102-25859121 MsG0180001711.01.T01:CDS 35.0%
TGCTCAAGATCAAATGGATA+AGG + Chr1:25854886-25854905 MsG0180001711.01.T01:CDS 35.0%
TGTGAATGATGACTCAATCA+TGG + Chr1:25858774-25858793 MsG0180001711.01.T01:CDS 35.0%
TGTGGAAGGAAGATTAAACT+GGG + Chr1:25857837-25857856 MsG0180001711.01.T01:intron 35.0%
TTAAGACGGCTGTTAAAGTT+TGG + Chr1:25861182-25861201 MsG0180001711.01.T01:CDS 35.0%
TTAAGCACTTGTGAGACTTT+AGG - Chr1:25856176-25856195 None:intergenic 35.0%
TTAAGTAACGTAACTCTTGC+AGG - Chr1:25860487-25860506 None:intergenic 35.0%
TTATTATCTTCTGTGCCTGT+AGG + Chr1:25855753-25855772 MsG0180001711.01.T01:intron 35.0%
TTTCTCAGGAAGGAAGATTA+AGG + Chr1:25856253-25856272 MsG0180001711.01.T01:intron 35.0%
! AACTGGTTTAGTTCGAATTC+AGG - Chr1:25862166-25862185 None:intergenic 35.0%
! AGAAGTGATTCTGCTATTTG+AGG + Chr1:25861699-25861718 MsG0180001711.01.T01:three_prime_UTR 35.0%
! AGTGGTCATGTTAGTTTCTA+GGG + Chr1:25857541-25857560 MsG0180001711.01.T01:intron 35.0%
! CAAACCAAGATCTAAGATGT+TGG + Chr1:25859044-25859063 MsG0180001711.01.T01:CDS 35.0%
! CAAGGTCAATTTTCTCATCA+TGG + Chr1:25857995-25858014 MsG0180001711.01.T01:CDS 35.0%
! CACCTTTTTCCATTTCAAAC+CGG - Chr1:25858615-25858634 None:intergenic 35.0%
! CCTTCTCTTTCTTCAGTTTT+TGG - Chr1:25859218-25859237 None:intergenic 35.0%
! CTGCTAGATGATGATTTTGA+AGG - Chr1:25860936-25860955 None:intergenic 35.0%
! GAAATGGACTCAGAAAGTAA+CGG + Chr1:25857230-25857249 MsG0180001711.01.T01:CDS 35.0%
! GATGTTTTCAGCTAGACAAA+GGG - Chr1:25861786-25861805 None:intergenic 35.0%
! GATTTGGTCATAACTGTGAA+TGG + Chr1:25854806-25854825 MsG0180001711.01.T01:CDS 35.0%
! TAAAAAGAACAAAGGGGCAT+TGG + Chr1:25859011-25859030 MsG0180001711.01.T01:CDS 35.0%
! TAGTGGTCATGTTAGTTTCT+AGG + Chr1:25857540-25857559 MsG0180001711.01.T01:intron 35.0%
! TGATGTTTTCAGCTAGACAA+AGG - Chr1:25861787-25861806 None:intergenic 35.0%
! TGTTTCTTTGTTTGCAGTGA+TGG - Chr1:25859455-25859474 None:intergenic 35.0%
! TTCATAGGTTTTTGTGTGGA+AGG + Chr1:25857823-25857842 MsG0180001711.01.T01:intron 35.0%
! TTGAATTGCTTACGCTTTTG+AGG - Chr1:25861524-25861543 None:intergenic 35.0%
! TTTCTATCACCGATTACTGA+AGG - Chr1:25854603-25854622 None:intergenic 35.0%
! TTTTCCGTTTTCCTTCATTC+GGG - Chr1:25858864-25858883 None:intergenic 35.0%
! TTTTTGTCAACCGTGCATAA+AGG + Chr1:25859488-25859507 MsG0180001711.01.T01:CDS 35.0%
!! AACCGGTTTGAAATGGAAAA+AGG + Chr1:25858610-25858629 MsG0180001711.01.T01:CDS 35.0%
!! ACGTATAGAGGCTTTAAAGA+AGG + Chr1:25859364-25859383 MsG0180001711.01.T01:CDS 35.0%
!! CAATTCAGCTGGTTGATAAT+TGG - Chr1:25858890-25858909 None:intergenic 35.0%
!! CTACAGTATTTGGTCTTGTT+CGG - Chr1:25862037-25862056 None:intergenic 35.0%
!! CTCACTCAAGTTGAAGTAAT+TGG + Chr1:25859240-25859259 MsG0180001711.01.T01:intron 35.0%
!! CTTATTTCTATAGGTTCTCC+TGG - Chr1:25856107-25856126 None:intergenic 35.0%
!! CTTTGATTTTCCTTGTGACA+AGG - Chr1:25856429-25856448 None:intergenic 35.0%
!! GAATGTTACCTAGTTCTAGT+TGG - Chr1:25854020-25854039 None:intergenic 35.0%
!! GCAATACTGATTCCGAAAAT+TGG + Chr1:25858218-25858237 MsG0180001711.01.T01:CDS 35.0%
!! TAACCAAAACCGGTTTGAAA+TGG + Chr1:25858603-25858622 MsG0180001711.01.T01:CDS 35.0%
!! TACAAAGTGTTGTCAGATAG+AGG + Chr1:25855117-25855136 MsG0180001711.01.T01:intron 35.0%
!! TCCAATGGACTAGGTTTATT+CGG - Chr1:25859147-25859166 None:intergenic 35.0%
!! TTTCCATTTCAAACCGGTTT+TGG - Chr1:25858609-25858628 None:intergenic 35.0%
!!! ATTGGGATGGTTGCTATTTT+AGG + Chr1:25854324-25854343 MsG0180001711.01.T01:intron 35.0%
!!! TTCAAACCGGTTTTGGTTAA+TGG - Chr1:25858602-25858621 None:intergenic 35.0%
AAAAAGAAGAGGATCGGGTA+AGG + Chr1:25858471-25858490 MsG0180001711.01.T01:CDS 40.0%
AAAATGCAGGCCCAAAATGT+AGG + Chr1:25858973-25858992 MsG0180001711.01.T01:CDS 40.0%
AAAGATCACATGCTGTTAGG+CGG - Chr1:25860428-25860447 None:intergenic 40.0%
AAATGACATCAAAGCCGGTA+TGG - Chr1:25856919-25856938 None:intergenic 40.0%
AAATGAGAATCCTCAGGTGA+AGG + Chr1:25861145-25861164 MsG0180001711.01.T01:CDS 40.0%
AACCCGTACATACACATACT+TGG + Chr1:25857391-25857410 MsG0180001711.01.T01:intron 40.0%
AACGGTGGGAAAACAAATTC+AGG + Chr1:25857248-25857267 MsG0180001711.01.T01:CDS 40.0%
AAGAAACATACGGAGGACAT+TGG + Chr1:25858527-25858546 MsG0180001711.01.T01:CDS 40.0%
AAGAAGGAGAAAATTGCCTC+AGG + Chr1:25854830-25854849 MsG0180001711.01.T01:CDS 40.0%
AAGAATCACAACTCAGCTAC+TGG + Chr1:25861209-25861228 MsG0180001711.01.T01:CDS 40.0%
AAGACTGTTGTGATGCTTGA+GGG + Chr1:25860052-25860071 MsG0180001711.01.T01:CDS 40.0%
AAGCTTCGATTTCAAGCCAT+AGG - Chr1:25857157-25857176 None:intergenic 40.0%
AATCACACTACCTTCATTGG+TGG - Chr1:25861282-25861301 None:intergenic 40.0%
AATTAGCGACTATAGCGTAG+TGG + Chr1:25855053-25855072 MsG0180001711.01.T01:intron 40.0%
ACCATTCGCTCCAATTTCAT+TGG - Chr1:25861258-25861277 None:intergenic 40.0%
ACCGAATAAACCTAGTCCAT+TGG + Chr1:25859143-25859162 MsG0180001711.01.T01:CDS 40.0%
ACCTCAAAAAGAAGAGGATC+GGG + Chr1:25858466-25858485 MsG0180001711.01.T01:CDS 40.0%
AGAATCACAACTCAGCTACT+GGG + Chr1:25861210-25861229 MsG0180001711.01.T01:CDS 40.0%
AGACAGACGTAAATCTAGCA+CGG + Chr1:25858336-25858355 MsG0180001711.01.T01:CDS 40.0%
AGCATGCTTGCAACTTCTAT+AGG - Chr1:25862597-25862616 None:intergenic 40.0%
AGTTCCCGAATGAAGGAAAA+CGG + Chr1:25858857-25858876 MsG0180001711.01.T01:CDS 40.0%
ATACGTGCTTCACTTGTGAT+TGG - Chr1:25860264-25860283 None:intergenic 40.0%
ATCAACGATGAGAAACCAAG+AGG + Chr1:25860100-25860119 MsG0180001711.01.T01:CDS 40.0%
ATCCGGACCGAAACAATTAT+TGG - Chr1:25854180-25854199 None:intergenic 40.0%
ATTGCCGTGTCTATTATCCA+TGG - Chr1:25858203-25858222 None:intergenic 40.0%
ATTGTTCTTGTGCCTGAGAA+TGG + Chr1:25854920-25854939 MsG0180001711.01.T01:CDS 40.0%
CAAGATCAAATGGATAAGGG+TGG + Chr1:25854890-25854909 MsG0180001711.01.T01:CDS 40.0%
CATAAACATGACCGTGAGTA+TGG + Chr1:25860387-25860406 MsG0180001711.01.T01:intron 40.0%
CATACTCAGAATTTCGTGCA+CGG - Chr1:25861019-25861038 None:intergenic 40.0%
CATGAACCTAAGCAAGAGAA+GGG + Chr1:25859683-25859702 MsG0180001711.01.T01:CDS 40.0%
CATGGTGGCTTCTATGTTTA+AGG - Chr1:25862643-25862662 None:intergenic 40.0%
CCTTCAAGTGGCATAGAAAT+GGG - Chr1:25854865-25854884 None:intergenic 40.0%
CGAACAAGACCAAATACTGT+AGG + Chr1:25862035-25862054 MsG0180001711.01.T01:three_prime_UTR 40.0%
CGACTTCCTTAGTTAAACCA+CGG + Chr1:25859783-25859802 MsG0180001711.01.T01:CDS 40.0%
CGTGGTTTAACTAAGGAAGT+CGG - Chr1:25859785-25859804 None:intergenic 40.0%
CTGAAAGAGGAGCTGATAAA+GGG + Chr1:25858920-25858939 MsG0180001711.01.T01:CDS 40.0%
CTGAGGATTCTCATTTACCT+CGG - Chr1:25861141-25861160 None:intergenic 40.0%
CTGTGATTGACAACATTGCT+TGG + Chr1:25855201-25855220 MsG0180001711.01.T01:intron 40.0%
CTTAAACATAGAAGCCACCA+TGG + Chr1:25862641-25862660 MsG0180001711.01.T01:three_prime_UTR 40.0%
CTTTGATCAGCATTTAGTCG+GGG - Chr1:25858160-25858179 None:intergenic 40.0%
GAAAGCAGTTGTTCCTTACA+AGG + Chr1:25856292-25856311 MsG0180001711.01.T01:CDS 40.0%
GAAATGGATATAGAGAGGGA+AGG + Chr1:25858274-25858293 MsG0180001711.01.T01:CDS 40.0%
GAAGAGGCAATTGCAATTCA+AGG + Chr1:25855648-25855667 MsG0180001711.01.T01:CDS 40.0%
GACATGCCATTAACCAAAAC+CGG + Chr1:25858593-25858612 MsG0180001711.01.T01:CDS 40.0%
GACCTCAAAAAGAAGAGGAT+CGG + Chr1:25858465-25858484 MsG0180001711.01.T01:CDS 40.0%
GAGGTTGAATTCAACTGACA+AGG + Chr1:25858504-25858523 MsG0180001711.01.T01:CDS 40.0%
GCAAAGACTGAACATTCTTC+TGG + Chr1:25858385-25858404 MsG0180001711.01.T01:CDS 40.0%
GCACCTTCTGAATTCATAGA+AGG - Chr1:25859965-25859984 None:intergenic 40.0%
GCATGCTTGCAACTTCTATA+GGG - Chr1:25862596-25862615 None:intergenic 40.0%
GGAAACTACATCAATCGGTA+TGG + Chr1:25861061-25861080 MsG0180001711.01.T01:CDS 40.0%
GGGTCTCCTTAAAACTCTTT+CGG + Chr1:25857574-25857593 MsG0180001711.01.T01:intron 40.0%
GGTCCAAGTATGTGTATGTA+CGG - Chr1:25857397-25857416 None:intergenic 40.0%
GTCCAAGTATGTGTATGTAC+GGG - Chr1:25857396-25857415 None:intergenic 40.0%
GTGAAGACCTCAAAAAGAAG+AGG + Chr1:25858460-25858479 MsG0180001711.01.T01:CDS 40.0%
GTGGAAGGAAGATTAAACTG+GGG + Chr1:25857838-25857857 MsG0180001711.01.T01:intron 40.0%
GTGTGGAAGGAAGATTAAAC+TGG + Chr1:25857836-25857855 MsG0180001711.01.T01:intron 40.0%
GTTATGAAGACACACCTTTG+AGG - Chr1:25860287-25860306 None:intergenic 40.0%
TAAGACTGTTGTGATGCTTG+AGG + Chr1:25860051-25860070 MsG0180001711.01.T01:CDS 40.0%
TACACTTGAGAAAATTCCCG+AGG + Chr1:25861121-25861140 MsG0180001711.01.T01:CDS 40.0%
TATACACGTTCCAGTATCTC+AGG - Chr1:25855600-25855619 None:intergenic 40.0%
TCAACGATGAGAAACCAAGA+GGG + Chr1:25860101-25860120 MsG0180001711.01.T01:CDS 40.0%
TCAGCAAATGACATCAAAGC+CGG - Chr1:25856924-25856943 None:intergenic 40.0%
TCTGATAGGGAATCTTTGGA+AGG - Chr1:25859552-25859571 None:intergenic 40.0%
TCTTTCACATAGTCTCACGT+AGG - Chr1:25857626-25857645 None:intergenic 40.0%
TGAGGATTCTCATTTACCTC+GGG - Chr1:25861140-25861159 None:intergenic 40.0%
TGAGGGAAATGCTATTGACA+TGG + Chr1:25858828-25858847 MsG0180001711.01.T01:CDS 40.0%
TGCATAAATGCACTGTTTCC+TGG - Chr1:25858112-25858131 None:intergenic 40.0%
TTCCCTATCAGAACTGTTTC+TGG + Chr1:25859560-25859579 MsG0180001711.01.T01:CDS 40.0%
TTCGGTTTACCCCTTCTTAT+TGG - Chr1:25859129-25859148 None:intergenic 40.0%
TTCTGAGTCCATTTCAGTGT+GGG - Chr1:25857225-25857244 None:intergenic 40.0%
TTTCTCAAGTGTAGAGTTCC+TGG - Chr1:25861114-25861133 None:intergenic 40.0%
TTTCTGAGTCCATTTCAGTG+TGG - Chr1:25857226-25857245 None:intergenic 40.0%
! AAGAATCTAGAGCCATGTGA+AGG + Chr1:25857479-25857498 MsG0180001711.01.T01:intron 40.0%
! ATCATTGGTTAGTGAGATGC+TGG + Chr1:25857005-25857024 MsG0180001711.01.T01:intron 40.0%
! ATGGACTAAAAACCAACTGC+AGG + Chr1:25857956-25857975 MsG0180001711.01.T01:intron 40.0%
! ATGGACTACTAACATGGCAT+TGG - Chr1:25855319-25855338 None:intergenic 40.0%
! CAAGGTTCTACTTTGGAAGA+TGG + Chr1:25860993-25861012 MsG0180001711.01.T01:CDS 40.0%
! CACCAGAAACAGTTCTGATA+GGG - Chr1:25859565-25859584 None:intergenic 40.0%
! CAGTTCTGATAGGGAATCTT+TGG - Chr1:25859556-25859575 None:intergenic 40.0%
! CTGATAGGGAATCTTTGGAA+GGG - Chr1:25859551-25859570 None:intergenic 40.0%
! GAGCCGTTATTAGAGTTTTG+AGG + Chr1:25855251-25855270 MsG0180001711.01.T01:intron 40.0%
! GCAATGAAGGGACTTTTGAA+AGG + Chr1:25855806-25855825 MsG0180001711.01.T01:CDS 40.0%
! GGACGAATGGTACTCATTTT+AGG - Chr1:25859764-25859783 None:intergenic 40.0%
! TGAAGAACCGCCTACATTTT+GGG - Chr1:25858986-25859005 None:intergenic 40.0%
! TGGAAAAGAAAGCATGAGAG+TGG + Chr1:25857131-25857150 MsG0180001711.01.T01:CDS 40.0%
! TTTTCCTTCATTCGGGAACT+CGG - Chr1:25858857-25858876 None:intergenic 40.0%
! TTTTCTTAGCTCCCACTTTG+AGG + Chr1:25861456-25861475 MsG0180001711.01.T01:three_prime_UTR 40.0%
!! CTATCAGAACTACTTGGTGT+AGG - Chr1:25859090-25859109 None:intergenic 40.0%
!! CTGCTTGTTATTGATGCCTT+AGG - Chr1:25859725-25859744 None:intergenic 40.0%
!! GCTGTTTTCATAAGTCATCC+AGG + Chr1:25856086-25856105 MsG0180001711.01.T01:intron 40.0%
!! GGTTGACTTGATGGTTGATT+TGG - Chr1:25859429-25859448 None:intergenic 40.0%
!! TCAATGATTGTTCGATTCGG+AGG + Chr1:25854140-25854159 MsG0180001711.01.T01:intron 40.0%
!!! AAAGAGTTTTAAGGAGACCC+AGG - Chr1:25857574-25857593 None:intergenic 40.0%
!!! AAGAGTTTTAAGGAGACCCA+GGG - Chr1:25857573-25857592 None:intergenic 40.0%
!!! ACTTGTTGCTTTTCTCAGGA+AGG + Chr1:25856243-25856262 MsG0180001711.01.T01:intron 40.0%
!!! AGAGTTTTGAGGCTATCGTT+TGG + Chr1:25855262-25855281 MsG0180001711.01.T01:intron 40.0%
!!! GAGAACTTGTTGCTTTTCTC+AGG + Chr1:25856239-25856258 MsG0180001711.01.T01:intron 40.0%
!!! GTTGCTTTTTCCAAAGCAGA+GGG + Chr1:25855387-25855406 MsG0180001711.01.T01:intron 40.0%
!!! TACGTACTGTTTTAGAGTCC+AGG + Chr1:25856800-25856819 MsG0180001711.01.T01:CDS 40.0%
!!! TGTTGCTTTTTCCAAAGCAG+AGG + Chr1:25855386-25855405 MsG0180001711.01.T01:intron 40.0%
!!! TTTGGTTTTCTTCCACCTAC+AGG - Chr1:25855771-25855790 None:intergenic 40.0%
!!! TTTTGACATCGACTCCATAC+CGG + Chr1:25856902-25856921 MsG0180001711.01.T01:CDS 40.0%
AAATGTAGGCGGTTCTTCAC+AGG + Chr1:25858987-25859006 MsG0180001711.01.T01:CDS 45.0%
AACAGCCGTCTTAACCCTTT+CGG - Chr1:25861176-25861195 None:intergenic 45.0%
AACAGTGCATTTATGCAGCC+AGG + Chr1:25858115-25858134 MsG0180001711.01.T01:CDS 45.0%
AACCTTGAGAATATGGGGTG+CGG - Chr1:25860980-25860999 None:intergenic 45.0%
AACTAAGGAAGTCGGACGAA+TGG - Chr1:25859777-25859796 None:intergenic 45.0%
ACTCACCGAAAGGGTTAAGA+CGG + Chr1:25861168-25861187 MsG0180001711.01.T01:CDS 45.0%
ACTGCATATGGATGGAACAC+TGG - Chr1:25858061-25858080 None:intergenic 45.0%
ACTTACAGTGCCAATCCCTA+TGG - Chr1:25855682-25855701 None:intergenic 45.0%
AGAATGGATGTGATGTCACG+TGG + Chr1:25854936-25854955 MsG0180001711.01.T01:CDS 45.0%
AGAGCTCCGTGGTTTAACTA+AGG - Chr1:25859792-25859811 None:intergenic 45.0%
AGAGGGATTTACTGGGGAAA+TGG + Chr1:25855404-25855423 MsG0180001711.01.T01:intron 45.0%
AGCTCACACCAACTAGAACT+AGG + Chr1:25854009-25854028 MsG0180001711.01.T01:CDS 45.0%
AGTGAAGCACGTATCCTCAA+AGG + Chr1:25860270-25860289 MsG0180001711.01.T01:CDS 45.0%
ATAGTCTCACGTAGGTAGCT+TGG - Chr1:25857618-25857637 None:intergenic 45.0%
ATGCTGGATTCTTCACCATC+TGG + Chr1:25857021-25857040 MsG0180001711.01.T01:intron 45.0%
ATGGACTCAGAAAGTAACGG+TGG + Chr1:25857233-25857252 MsG0180001711.01.T01:CDS 45.0%
CAAAGCAGAGGGATTTACTG+GGG + Chr1:25855398-25855417 MsG0180001711.01.T01:intron 45.0%
CATAAAGCAGTTGGGCATGT+TGG - Chr1:25856616-25856635 None:intergenic 45.0%
CCAAAGCAGAGGGATTTACT+GGG + Chr1:25855397-25855416 MsG0180001711.01.T01:intron 45.0%
CCTGAAAGAGGAGCTGATAA+AGG + Chr1:25858919-25858938 MsG0180001711.01.T01:CDS 45.0%
CCTGGATAAGTCGGATAGTA+GGG - Chr1:25858094-25858113 None:intergenic 45.0%
CCTTTATCAGCTCCTCTTTC+AGG - Chr1:25858922-25858941 None:intergenic 45.0%
CGAGGTAAATGAGAATCCTC+AGG + Chr1:25861139-25861158 MsG0180001711.01.T01:CDS 45.0%
CGTGCACGAAATTCTGAGTA+TGG + Chr1:25861017-25861036 MsG0180001711.01.T01:CDS 45.0%
CTCAGGAAGGAAGATTAAGG+AGG + Chr1:25856256-25856275 MsG0180001711.01.T01:intron 45.0%
GAAGGCTGCTCAAGATCAAA+TGG + Chr1:25854880-25854899 MsG0180001711.01.T01:CDS 45.0%
GACAAAAGAGAATCGCTGCT+AGG + Chr1:25859390-25859409 MsG0180001711.01.T01:CDS 45.0%
GACAAGGAAGAAACATACGG+AGG + Chr1:25858520-25858539 MsG0180001711.01.T01:CDS 45.0%
GAGAAGACACAGAAGCTTAG+TGG + Chr1:25859932-25859951 MsG0180001711.01.T01:CDS 45.0%
GAGAGAATGAATAGGCCATG+GGG - Chr1:25858026-25858045 None:intergenic 45.0%
GATGTAGTTTCCAAGCTCGT+GGG - Chr1:25861053-25861072 None:intergenic 45.0%
GCACTGTTTCCTGGATAAGT+CGG - Chr1:25858103-25858122 None:intergenic 45.0%
GCAGTTGTTCCTTACAAGGT+TGG + Chr1:25856296-25856315 MsG0180001711.01.T01:intron 45.0%
GCATGAACCTAAGCAAGAGA+AGG + Chr1:25859682-25859701 MsG0180001711.01.T01:CDS 45.0%
GCCAATGAAATTGGAGCGAA+TGG + Chr1:25861254-25861273 MsG0180001711.01.T01:CDS 45.0%
GCCTTCAAGTGGCATAGAAA+TGG - Chr1:25854866-25854885 None:intergenic 45.0%
GCTCTAGTATTATCACGACG+AGG + Chr1:25862557-25862576 MsG0180001711.01.T01:three_prime_UTR 45.0%
GGAGAGAATGAATAGGCCAT+GGG - Chr1:25858027-25858046 None:intergenic 45.0%
GTAGAGAAGTCTGCACGATT+AGG - Chr1:25857191-25857210 None:intergenic 45.0%
GTCACATCCTTCATCAGATG+TGG + Chr1:25858693-25858712 MsG0180001711.01.T01:CDS 45.0%
GTGAACTTCTTCGGTTTCAG+TGG - Chr1:25858434-25858453 None:intergenic 45.0%
GTGACATCACATCCATTCTC+AGG - Chr1:25854935-25854954 None:intergenic 45.0%
GTGATATCCATGTCTGCCAT+TGG - Chr1:25856544-25856563 None:intergenic 45.0%
GTTGTTCCTTACAAGGTTGG+AGG + Chr1:25856299-25856318 MsG0180001711.01.T01:intron 45.0%
TAGTTAAACCACGGAGCTCT+AGG + Chr1:25859792-25859811 MsG0180001711.01.T01:CDS 45.0%
TATGGTACCCATAGGAACCT+TGG + Chr1:25860234-25860253 MsG0180001711.01.T01:CDS 45.0%
TCAAGACCTCCAACCTTGTA+AGG - Chr1:25856308-25856327 None:intergenic 45.0%
TCCAAAGCAGAGGGATTTAC+TGG + Chr1:25855396-25855415 MsG0180001711.01.T01:intron 45.0%
TCCTGGATAAGTCGGATAGT+AGG - Chr1:25858095-25858114 None:intergenic 45.0%
TCGACACAGAAGACATTCCA+TGG + Chr1:25858183-25858202 MsG0180001711.01.T01:CDS 45.0%
TCTGCAGAAAGAGCAAGGAA+TGG + Chr1:25856854-25856873 MsG0180001711.01.T01:CDS 45.0%
TGATGTAGTTTCCAAGCTCG+TGG - Chr1:25861054-25861073 None:intergenic 45.0%
TGATGTCACGTGGTTTACCA+GGG + Chr1:25854946-25854965 MsG0180001711.01.T01:CDS 45.0%
TGCTTAGGTTCATGCAGAAG+AGG - Chr1:25859677-25859696 None:intergenic 45.0%
TGGAAGGGTAAGGATGATCT+TGG - Chr1:25859536-25859555 None:intergenic 45.0%
TGGACTCAGAAAGTAACGGT+GGG + Chr1:25857234-25857253 MsG0180001711.01.T01:CDS 45.0%
TGGTTCTCCAAGGTTCCTAT+GGG - Chr1:25860244-25860263 None:intergenic 45.0%
TTAAGTGCCAATGGCAGACA+TGG + Chr1:25856534-25856553 MsG0180001711.01.T01:intron 45.0%
TTACCAGGGGAACTATCGAA+AGG + Chr1:25854960-25854979 MsG0180001711.01.T01:CDS 45.0%
TTATCTTCTGTGCCTGTAGG+TGG + Chr1:25855756-25855775 MsG0180001711.01.T01:intron 45.0%
TTCCATCCATATGCAGTCGA+AGG + Chr1:25858064-25858083 MsG0180001711.01.T01:CDS 45.0%
TTGCAAGCATGCTTCACAGA+CGG + Chr1:25862604-25862623 MsG0180001711.01.T01:three_prime_UTR 45.0%
TTTACGTCTGTCTGATCGAC+TGG - Chr1:25858329-25858348 None:intergenic 45.0%
! AAGGTGCTTCCATTTGCTTC+AGG - Chr1:25856410-25856429 None:intergenic 45.0%
! ACCCGATCCTCTTCTTTTTG+AGG - Chr1:25858470-25858489 None:intergenic 45.0%
! AGGGAATCTTTGGAAGGGTA+AGG - Chr1:25859546-25859565 None:intergenic 45.0%
! CACTTGTGATTGGTTCTCCA+AGG - Chr1:25860254-25860273 None:intergenic 45.0%
! CCACCAGAAACAGTTCTGAT+AGG - Chr1:25859566-25859585 None:intergenic 45.0%
! CCCATTTCTATGCCACTTGA+AGG + Chr1:25854862-25854881 MsG0180001711.01.T01:CDS 45.0%
! CTTTGTTTGCAGTGATGGCA+TGG - Chr1:25859450-25859469 None:intergenic 45.0%
! GGGACACCGAAAGAGTTTTA+AGG - Chr1:25857583-25857602 None:intergenic 45.0%
! GTGAAGAACCGCCTACATTT+TGG - Chr1:25858987-25859006 None:intergenic 45.0%
! TCGTTGATATCAAGGGCACA+AGG - Chr1:25860088-25860107 None:intergenic 45.0%
! TGGTGGTGCAAACAATCCTA+AGG + Chr1:25859706-25859725 MsG0180001711.01.T01:CDS 45.0%
! TTAGCTTGGTTTCCTGCAGT+TGG - Chr1:25857971-25857990 None:intergenic 45.0%
! TTGGTTCTCCAAGGTTCCTA+TGG - Chr1:25860245-25860264 None:intergenic 45.0%
!! AATGGAAGCACCTTGTCACA+AGG + Chr1:25856416-25856435 MsG0180001711.01.T01:intron 45.0%
!! ATCGACTGGTCTTCTTCCTT+CGG - Chr1:25858315-25858334 None:intergenic 45.0%
!! CCTATCAGAACTGTTTCTGG+TGG + Chr1:25859563-25859582 MsG0180001711.01.T01:CDS 45.0%
!! GAAGGGACTTTTGAAAGGAC+AGG + Chr1:25855811-25855830 MsG0180001711.01.T01:CDS 45.0%
!! GCTATCGTTGTTTTCCCTCT+TGG - Chr1:25860118-25860137 None:intergenic 45.0%
!! GGAGCTCTAGGACAATTTCA+AGG + Chr1:25859804-25859823 MsG0180001711.01.T01:CDS 45.0%
!! TAGCTTGGTTGGTGAGCTAA+GGG - Chr1:25857603-25857622 None:intergenic 45.0%
!! TGATGGCATGGTTGACTTGA+TGG - Chr1:25859438-25859457 None:intergenic 45.0%
!! TTGAGCTTGTTGCCTGAAAG+AGG + Chr1:25858907-25858926 MsG0180001711.01.T01:CDS 45.0%
!!! ACTCAGTCTGCTGGTTTTTG+AGG - Chr1:25859609-25859628 None:intergenic 45.0%
!!! CTCAGTCTGCTGGTTTTTGA+GGG - Chr1:25859608-25859627 None:intergenic 45.0%
!!! AAATAATAATAATTTTGATT+TGG - Chr1:25862241-25862260 None:intergenic 5.0%
!!! TAGAAAAATAATAATTTTTA+TGG + Chr1:25861369-25861388 MsG0180001711.01.T01:three_prime_UTR 5.0%
AAAACCAGCAGACTGAGTGC+TGG + Chr1:25859611-25859630 MsG0180001711.01.T01:CDS 50.0%
ACACCTTTCGATAGTTCCCC+TGG - Chr1:25854966-25854985 None:intergenic 50.0%
ACAGCAGCCACATCTGATGA+AGG - Chr1:25858703-25858722 None:intergenic 50.0%
ACCCCTTCTTATTGGCCCAA+CGG - Chr1:25859121-25859140 None:intergenic 50.0%
ACCGTTGGGCCAATAAGAAG+GGG + Chr1:25859117-25859136 MsG0180001711.01.T01:CDS 50.0%
ACCTTGAGAATATGGGGTGC+GGG - Chr1:25860979-25860998 None:intergenic 50.0%
AGACCGTTGGGCCAATAAGA+AGG + Chr1:25859115-25859134 MsG0180001711.01.T01:CDS 50.0%
AGGGGAACTATCGAAAGGTG+TGG + Chr1:25854965-25854984 MsG0180001711.01.T01:intron 50.0%
AGGTGAAGGACTCACCGAAA+GGG + Chr1:25861159-25861178 MsG0180001711.01.T01:CDS 50.0%
AGTCCTGGAGACACGTAAGT+CGG + Chr1:25856830-25856849 MsG0180001711.01.T01:CDS 50.0%
ATGCAGGCCCAAAATGTAGG+CGG + Chr1:25858976-25858995 MsG0180001711.01.T01:CDS 50.0%
CAGACGTAAATCTAGCACGG+TGG + Chr1:25858339-25858358 MsG0180001711.01.T01:CDS 50.0%
CATTGGGGTCACTAGTTCAC+CGG - Chr1:25862423-25862442 None:intergenic 50.0%
CCATTGGAGCTCAGGAAAAG+AGG - Chr1:25861763-25861782 None:intergenic 50.0%
CCCAGTAAATCCCTCTGCTT+TGG - Chr1:25855400-25855419 None:intergenic 50.0%
CCCTACTATCCGACTTATCC+AGG + Chr1:25858091-25858110 MsG0180001711.01.T01:CDS 50.0%
CGTTAGCACACCTGAGATAC+TGG + Chr1:25855587-25855606 MsG0180001711.01.T01:CDS 50.0%
CTCAGCTACTGGGCACAATA+TGG + Chr1:25861220-25861239 MsG0180001711.01.T01:CDS 50.0%
CTCATCATGGATTCTCCCCA+TGG + Chr1:25858008-25858027 MsG0180001711.01.T01:CDS 50.0%
GAAATTGTCCTAGAGCTCCG+TGG - Chr1:25859803-25859822 None:intergenic 50.0%
GAACCTAAGCAAGAGAAGGG+TGG + Chr1:25859686-25859705 MsG0180001711.01.T01:CDS 50.0%
GACCGTTGGGCCAATAAGAA+GGG + Chr1:25859116-25859135 MsG0180001711.01.T01:CDS 50.0%
GAGAGGGAAGGTTTACAGAC+TGG + Chr1:25858286-25858305 MsG0180001711.01.T01:CDS 50.0%
GATCTTGAGCAGCCTTCAAG+TGG - Chr1:25854877-25854896 None:intergenic 50.0%
GATGTCACGTGGTTTACCAG+GGG + Chr1:25854947-25854966 MsG0180001711.01.T01:CDS 50.0%
GCACCTGGGAGAGAATGAAT+AGG - Chr1:25858034-25858053 None:intergenic 50.0%
GCGAATGGTTCCACCAATGA+AGG + Chr1:25861269-25861288 MsG0180001711.01.T01:CDS 50.0%
GCTTCGAAACGGCGATAACA+AGG - Chr1:25861645-25861664 None:intergenic 50.0%
GGCAACAAGCTCAATTCAGC+TGG - Chr1:25858901-25858920 None:intergenic 50.0%
GGGAGAGAATGAATAGGCCA+TGG - Chr1:25858028-25858047 None:intergenic 50.0%
GTGATGTCACGTGGTTTACC+AGG + Chr1:25854945-25854964 MsG0180001711.01.T01:CDS 50.0%
GTGCTTCCATTTGCTTCAGG+CGG - Chr1:25856407-25856426 None:intergenic 50.0%
GTTTACAGACTGGAGACCGA+AGG + Chr1:25858296-25858315 MsG0180001711.01.T01:CDS 50.0%
TCAGATGTGGCTGCTGTCAA+TGG + Chr1:25858706-25858725 MsG0180001711.01.T01:CDS 50.0%
TCAGCTAGACAAAGGGCCAT+TGG - Chr1:25861779-25861798 None:intergenic 50.0%
TCGGTTCTGCAGAAAGAGCA+AGG + Chr1:25856849-25856868 MsG0180001711.01.T01:CDS 50.0%
TCTCACGTAGGTAGCTTGGT+TGG - Chr1:25857614-25857633 None:intergenic 50.0%
TCTCCAGGACTCTCAAAACC+TGG - Chr1:25856821-25856840 None:intergenic 50.0%
TGCAAGCATGCTTCACAGAC+GGG + Chr1:25862605-25862624 MsG0180001711.01.T01:three_prime_UTR 50.0%
TGGCCTATTCATTCTCTCCC+AGG + Chr1:25858028-25858047 MsG0180001711.01.T01:CDS 50.0%
TTGTACTGCTGTCTGTGCAC+TGG + Chr1:25860192-25860211 MsG0180001711.01.T01:CDS 50.0%
TTTAGTCGGGGATCCTCCAT+AGG - Chr1:25858148-25858167 None:intergenic 50.0%
! CCTCTTTTCCTGAGCTCCAA+TGG + Chr1:25861760-25861779 MsG0180001711.01.T01:three_prime_UTR 50.0%
! CGGGTAAGGCATCTTTGAAG+AGG + Chr1:25858485-25858504 MsG0180001711.01.T01:CDS 50.0%
! CGTGCTTCATCCAATGGACT+AGG - Chr1:25859156-25859175 None:intergenic 50.0%
! GAAAGCATGAGAGTGGCCTA+TGG + Chr1:25857138-25857157 MsG0180001711.01.T01:CDS 50.0%
! TCTCGGCTGTTGCTTCGAAA+CGG - Chr1:25861656-25861675 None:intergenic 50.0%
!! AAATGGGCTGAGCAAACCTG+AGG - Chr1:25854849-25854868 None:intergenic 50.0%
!! ACGCTTTTGAGGAGTTGCGT+TGG - Chr1:25861513-25861532 None:intergenic 50.0%
!! AGTTTCTAGGGTTTGAGCCC+TGG + Chr1:25857553-25857572 MsG0180001711.01.T01:intron 50.0%
!! GTAGCTTGGTTGGTGAGCTA+AGG - Chr1:25857604-25857623 None:intergenic 50.0%
!! GTTTCTAGGGTTTGAGCCCT+GGG + Chr1:25857554-25857573 MsG0180001711.01.T01:intron 50.0%
!!! AGTCCAGGTTTTGAGAGTCC+TGG + Chr1:25856815-25856834 MsG0180001711.01.T01:CDS 50.0%
AAGCCACCATGGCTCTCAGA+GGG + Chr1:25862652-25862671 MsG0180001711.01.T01:three_prime_UTR 55.0%
ACAAAGGGCCATTGGAGCTC+AGG - Chr1:25861771-25861790 None:intergenic 55.0%
ACACAGCCGCCTGAAGCAAA+TGG + Chr1:25856398-25856417 MsG0180001711.01.T01:intron 55.0%
ATCTAGCAGTCACACTGCCG+AGG + Chr1:25860947-25860966 MsG0180001711.01.T01:CDS 55.0%
CAGGTGAAGGACTCACCGAA+AGG + Chr1:25861158-25861177 MsG0180001711.01.T01:CDS 55.0%
CCACCACCCTTCTCTTGCTT+AGG - Chr1:25859692-25859711 None:intergenic 55.0%
CCTAAGCAAGAGAAGGGTGG+TGG + Chr1:25859689-25859708 MsG0180001711.01.T01:CDS 55.0%
CGCCTTCGACTGCATATGGA+TGG - Chr1:25858069-25858088 None:intergenic 55.0%
CGTGCTCGTGCTTCATCCAA+TGG - Chr1:25859162-25859181 None:intergenic 55.0%
GACTCCGAGTTCCCGAATGA+AGG + Chr1:25858850-25858869 MsG0180001711.01.T01:CDS 55.0%
GGTACGCCTTCGACTGCATA+TGG - Chr1:25858073-25858092 None:intergenic 55.0%
GTAGTTTCCAAGCTCGTGGG+AGG - Chr1:25861050-25861069 None:intergenic 55.0%
TCCCGCACCCCATATTCTCA+AGG + Chr1:25860975-25860994 MsG0180001711.01.T01:CDS 55.0%
TTCGGTGAGTCCTTCACCTG+AGG - Chr1:25861158-25861177 None:intergenic 55.0%
! GAACCGACTTACGTGTCTCC+AGG - Chr1:25856836-25856855 None:intergenic 55.0%
! GGAACACTGGCAAAGCACCT+GGG - Chr1:25858048-25858067 None:intergenic 55.0%
! TAAAGCACCTCCCACGAGCT+TGG + Chr1:25861040-25861059 MsG0180001711.01.T01:CDS 55.0%
! TGGAACACTGGCAAAGCACC+TGG - Chr1:25858049-25858068 None:intergenic 55.0%
! TTTGCACGTGCTGTTGCTGC+AGG + Chr1:25856879-25856898 MsG0180001711.01.T01:CDS 55.0%
ACTGCCAGCACTCAGTCTGC+TGG - Chr1:25859618-25859637 None:intergenic 60.0%
AGCCACCATGGCTCTCAGAG+GGG + Chr1:25862653-25862672 MsG0180001711.01.T01:three_prime_UTR 60.0%
AGTCGGGGATCCTCCATAGG+CGG - Chr1:25858145-25858164 None:intergenic 60.0%
GAAGCCACCATGGCTCTCAG+AGG + Chr1:25862651-25862670 MsG0180001711.01.T01:three_prime_UTR 60.0%
GAGCACACGTGTCTGACACC+AGG + Chr1:25861093-25861112 MsG0180001711.01.T01:CDS 60.0%
TCCTCCATAGGCGGACAACC+TGG - Chr1:25858136-25858155 None:intergenic 60.0%
TGGGGTGCGGGATGTTTCCT+CGG - Chr1:25860967-25860986 None:intergenic 60.0%
! CTTCTCCCCTCTGAGAGCCA+TGG - Chr1:25862661-25862680 None:intergenic 60.0%
GCAGCCAGGTTGTCCGCCTA+TGG + Chr1:25858129-25858148 MsG0180001711.01.T01:CDS 65.0%
GCCAGGTTGTCCGCCTATGG+AGG + Chr1:25858132-25858151 MsG0180001711.01.T01:CDS 65.0%
! CTCCCCTCTGAGAGCCATGG+TGG - Chr1:25862658-25862677 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 25853972 25862702 25853972 ID=MsG0180001711.01;Name=MsG0180001711.01
Chr1 mRNA 25853972 25862702 25853972 ID=MsG0180001711.01.T01;Parent=MsG0180001711.01;Name=MsG0180001711.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0.77|0.7|1|0.77|0.8|10|1380|1152
Chr1 exon 25853972 25854030 25853972 ID=MsG0180001711.01.T01:exon:40947;Parent=MsG0180001711.01.T01
Chr1 exon 25854802 25854981 25854802 ID=MsG0180001711.01.T01:exon:40948;Parent=MsG0180001711.01.T01
Chr1 exon 25855575 25855695 25855575 ID=MsG0180001711.01.T01:exon:40949;Parent=MsG0180001711.01.T01
Chr1 exon 25855775 25855832 25855775 ID=MsG0180001711.01.T01:exon:40950;Parent=MsG0180001711.01.T01
Chr1 exon 25856261 25856313 25856261 ID=MsG0180001711.01.T01:exon:40951;Parent=MsG0180001711.01.T01
Chr1 exon 25856768 25856967 25856768 ID=MsG0180001711.01.T01:exon:40952;Parent=MsG0180001711.01.T01
Chr1 exon 25857103 25857269 25857103 ID=MsG0180001711.01.T01:exon:40953;Parent=MsG0180001711.01.T01
Chr1 exon 25857978 25859236 25857978 ID=MsG0180001711.01.T01:exon:40954;Parent=MsG0180001711.01.T01
Chr1 exon 25859347 25860291 25859347 ID=MsG0180001711.01.T01:exon:40955;Parent=MsG0180001711.01.T01
Chr1 exon 25860906 25862702 25860906 ID=MsG0180001711.01.T01:exon:40956;Parent=MsG0180001711.01.T01
Chr1 CDS 25853972 25854030 25853972 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25854802 25854981 25854802 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25855575 25855695 25855575 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25855775 25855832 25855775 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25856261 25856313 25856261 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25856768 25856967 25856768 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25857103 25857269 25857103 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25857978 25859236 25857978 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25859347 25860291 25859347 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 CDS 25860906 25861322 25860906 ID=MsG0180001711.01.T01:cds;Parent=MsG0180001711.01.T01
Chr1 three_prime_UTR 25861323 25862702 25861323 ID=MsG0180001711.01.T01:three_prime_utr;Parent=MsG0180001711.01.T01
Gene Sequence

>MsG0180001711.01.T01

ATGAACTCTTCAACAAGGTTGGATTCAGCTTTGTTTCAGCTCACACCAACTAGAACTAGGTTTGATTTGGTCATAACTGTGAATGGAAAGAAGGAGAAAATTGCCTCAGGTTTGCTCAGCCCATTTCTATGCCACTTGAAGGCTGCTCAAGATCAAATGGATAAGGGTGGTTATTCAATTGTTCTTGTGCCTGAGAATGGATGTGATGTCACGTGGTTTACCAGGGGAACTATCGAAAGGTTTGTTCGGTTCGTTAGCACACCTGAGATACTGGAACGTGTATATACTATAGAATCTGAAATCTTACAAATTGAAGAGGCAATTGCAATTCAAGGAAATAATTCCATAGGGATTGGCACTGTGGAAGAAAACCAAATAAAACAAGTGGAAAGCAATGAAGGGACTTTTGAAAGGACAGGAAGGAAGATTAAGGAGGATAGTAATGTGGAGAAAGCAGTTGTTCCTTACAAGGTTGTTAACATCTGTGTCGTATTCACTTTCTTTACGTACTGTTTTAGAGTCCAGGTTTTGAGAGTCCTGGAGACACGTAAGTCGGTTCTGCAGAAAGAGCAAGGAATGGCATTTGCACGTGCTGTTGCTGCAGGTTTTGACATCGACTCCATACCGGCTTTGATGTCATTTGCTGAATGCTTTGAAGCGTCACGCTTGATGGATGCATGTAGAAAATTCATGTCTCTATGGAAAAGAAAGCATGAGAGTGGCCTATGGCTTGAAATCGAAGCTTCTGAAGTGACACCTAATCGTGCAGACTTCTCTACAATAAATACATCCCACACTGAAATGGACTCAGAAAGTAACGGTGGGAAAACAAATTCAGGAAACCAAGCTAATATTCAAGGTCAATTTTCTCATCATGGATTCTCCCCATGGCCTATTCATTCTCTCCCAGGTGCTTTGCCAGTGTTCCATCCATATGCAGTCGAAGGCGTACCCTACTATCCGACTTATCCAGGAAACAGTGCATTTATGCAGCCAGGTTGTCCGCCTATGGAGGATCCCCGACTAAATGCTGATCAAAGTATTCGACACAGAAGACATTCCATGGATAATAGACACGGCAATACTGATTCCGAAAATTGGGACATTGAAACTTCAAAAACAAGTTTTAAGGATGAAATGGATATAGAGAGGGAAGGTTTACAGACTGGAGACCGAAGGAAGAAGACCAGTCGATCAGACAGACGTAAATCTAGCACGGTGGTCGTCCGAAATATCAATTACATAGCAAAGACTGAACATTCTTCTGGCAGTGAATCATATTCTGATTCTGCCACTGAAACCGAAGAAGTTCACAAATCTGTGAAGACCTCAAAAAGAAGAGGATCGGGTAAGGCATCTTTGAAGAGGTTGAATTCAACTGACAAGGAAGAAACATACGGAGGACATTGGCAAGCATTCCAAAATTATTTATTGAAAGGTGTAGATGAAGATAGACATGCCATTAACCAAAACCGGTTTGAAATGGAAAAAGGTGATCATGTGAGAAGAAAAAAACATGTTGTAGCCAAAGATCCTTTAGATTTGACTGGTAAGTCACATCCTTCATCAGATGTGGCTGCTGTCAATGGACAATGTTATTCAAACACTGATTTGGAAAAGAAGTTGTTTCATAATGTGAATGATGACTCAATCATGGTTGAACACAGAGTCAATGATCCAGTAAATATTGAGGGAAATGCTATTGACATGGACTCCGAGTTCCCGAATGAAGGAAAACGGAAAATCTCCAATTATCAACCAGCTGAATTGAGCTTGTTGCCTGAAAGAGGAGCTGATAAAGGGTCAATGCGTTATGACTGTGCACTAGACTACAAAATGCAGGCCCAAAATGTAGGCGGTTCTTCACAGGATAAAAAGAACAAAGGGGCATTGGCTCATCACACCAAACCAAGATCTAAGATGTTGGATAAGGAGCAGAAATCAAAACCTACACCAAGTAGTTCTGATAGAAAAAAGACCGTTGGGCCAATAAGAAGGGGTAAACCGAATAAACCTAGTCCATTGGATGAAGCACGAGCACGTGCTGAAAGACTGCGTAACTACAAAGCAGATCTCCAAAAACTGAAGAAAGAGAAGGAAGAGGAAGATATAAAACGTATAGAGGCTTTAAAGAAGGAGAGACAAAAGAGAATCGCTGCTAGGAGTAGCTCAGTCACCAAATCAACCATCAAGTCAACCATGCCATCACTGCAAACAAAGAAACAGTTTCAAACAAAATTTTTGTCAACCGTGCATAAAGGATCAAAGTTTAGTGATTCAGAGCCAAGATCATCCTTACCCTTCCAAAGATTCCCTATCAGAACTGTTTCTGGTGGATCCAATGATTCTTTAAAACCCTCAAAAACCAGCAGACTGAGTGCTGGCAGTAGCAACTCAGTTACAAGCAAATTAAGGCAATCAGTGCCTCTTCTGCATGAACCTAAGCAAGAGAAGGGTGGTGGTGCAAACAATCCTAAGGCATCAATAACAAGCAGTAGAAGATTCTCAGAACCTAAAATGAGTACCATTCGTCCGACTTCCTTAGTTAAACCACGGAGCTCTAGGACAATTTCAAGGACTAAGGCAGTTGATGAGACTGAGAGAAGAAAGATTTCTGCTATTGTGAATTATGATAAAGACAAGATTGCAACTCTTCCAGAACTGAAAATCAGAATATCTAAAGAGAAGACACAGAAGCTTAGTGGTGACATGCCTTCTATGAATTCAGAAGGTGCCTTGCTGAAGAAAAGTGAAATTGAAATTTCAACCACTGATGATAGAGATGAAATTCCTATGATTGATAAGACTGTTGTGATGCTTGAGGGTGAAAAAAAACCTTGTGCCCTTGATATCAACGATGAGAAACCAAGAGGGAAAACAACGATAGCAAAGAGACAAGATGACAAAGATAAAGAAATGGAGAAAACTGAGAAAGTATCAAGTTGTACTGCTGTCTGTGCACTGGCTTCATCCTTAAGAACAAATATGGTACCCATAGGAACCTTGGAGAACCAATCACAAGTGAAGCACGTATCCTCAAAGGTTAAAATGAATAATACAAAGAATGAACCTTCAAAATCATCATCTAGCAGTCACACTGCCGAGGAAACATCCCGCACCCCATATTCTCAAGGTTCTACTTTGGAAGATGGCCGTGCACGAAATTCTGAGTATGGTAAAGCACCTCCCACGAGCTTGGAAACTACATCAATCGGTATGGAGACTTTCAGAGCACACGTGTCTGACACCAGGAACTCTACACTTGAGAAAATTCCCGAGGTAAATGAGAATCCTCAGGTGAAGGACTCACCGAAAGGGTTAAGACGGCTGTTAAAGTTTGGAAAAAAGAATCACAACTCAGCTACTGGGCACAATATGGAATCAGATCATGCCAATGAAATTGGAGCGAATGGTTCCACCAATGAAGGTAGTGTGATTCTTTCTGATCGCAATATATAG
Protein sequence

>MsG0180001711.01.T01

MNSSTRLDSALFQLTPTRTRFDLVITVNGKKEKIASGLLSPFLCHLKAAQDQMDKGGYSIVLVPENGCDVTWFTRGTIERFVRFVSTPEILERVYTIESEILQIEEAIAIQGNNSIGIGTVEENQIKQVESNEGTFERTGRKIKEDSNVEKAVVPYKVVNICVVFTFFTYCFRVQVLRVLETRKSVLQKEQGMAFARAVAAGFDIDSIPALMSFAECFEASRLMDACRKFMSLWKRKHESGLWLEIEASEVTPNRADFSTINTSHTEMDSESNGGKTNSGNQANIQGQFSHHGFSPWPIHSLPGALPVFHPYAVEGVPYYPTYPGNSAFMQPGCPPMEDPRLNADQSIRHRRHSMDNRHGNTDSENWDIETSKTSFKDEMDIEREGLQTGDRRKKTSRSDRRKSSTVVVRNINYIAKTEHSSGSESYSDSATETEEVHKSVKTSKRRGSGKASLKRLNSTDKEETYGGHWQAFQNYLLKGVDEDRHAINQNRFEMEKGDHVRRKKHVVAKDPLDLTGKSHPSSDVAAVNGQCYSNTDLEKKLFHNVNDDSIMVEHRVNDPVNIEGNAIDMDSEFPNEGKRKISNYQPAELSLLPERGADKGSMRYDCALDYKMQAQNVGGSSQDKKNKGALAHHTKPRSKMLDKEQKSKPTPSSSDRKKTVGPIRRGKPNKPSPLDEARARAERLRNYKADLQKLKKEKEEEDIKRIEALKKERQKRIAARSSSVTKSTIKSTMPSLQTKKQFQTKFLSTVHKGSKFSDSEPRSSLPFQRFPIRTVSGGSNDSLKPSKTSRLSAGSSNSVTSKLRQSVPLLHEPKQEKGGGANNPKASITSSRRFSEPKMSTIRPTSLVKPRSSRTISRTKAVDETERRKISAIVNYDKDKIATLPELKIRISKEKTQKLSGDMPSMNSEGALLKKSEIEISTTDDRDEIPMIDKTVVMLEGEKKPCALDINDEKPRGKTTIAKRQDDKDKEMEKTEKVSSCTAVCALASSLRTNMVPIGTLENQSQVKHVSSKVKMNNTKNEPSKSSSSSHTAEETSRTPYSQGSTLEDGRARNSEYGKAPPTSLETTSIGMETFRAHVSDTRNSTLEKIPEVNENPQVKDSPKGLRRLLKFGKKNHNSATGHNMESDHANEIGANGSTNEGSVILSDRNI*