AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024317.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024317.01.T01 MTR_5g008900 96.802 688 13 2 1 682 1 685 0.0 1364
MsG0580024317.01.T01 MTR_3g436060 42.755 697 336 23 1 672 1 659 3.59e-136 416
MsG0580024317.01.T01 MTR_0005s0130 44.796 538 246 19 158 677 128 632 8.28e-116 362
MsG0580024317.01.T01 MTR_4g043660 44.796 538 246 19 158 677 128 632 8.28e-116 362
MsG0580024317.01.T01 MTR_5g094700 34.190 389 188 12 178 521 111 476 1.37e-48 179
MsG0580024317.01.T01 MTR_3g056160 36.533 323 144 10 232 521 159 453 5.77e-45 169
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 1 620 2.87e-134 409
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 1 620 2.87e-134 409
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 1 620 2.87e-134 409
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 1 620 2.87e-134 409
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 1 620 2.87e-134 409
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 1 620 2.87e-134 409
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 1 620 2.87e-134 409
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 32 651 5.58e-134 410
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 32 651 5.58e-134 410
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 32 651 5.58e-134 410
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 32 651 5.58e-134 410
MsG0580024317.01.T01 AT5G12440 43.155 672 305 28 1 647 32 651 5.58e-134 410
MsG0580024317.01.T01 AT3G21100 43.798 653 262 27 7 641 7 572 2.85e-132 403
MsG0580024317.01.T01 AT3G21100 43.798 653 262 27 7 641 7 572 2.85e-132 403
MsG0580024317.01.T01 AT3G21100 43.578 654 263 27 7 641 7 573 1.36e-131 401
MsG0580024317.01.T01 AT3G21100 43.578 654 263 27 7 641 7 573 1.36e-131 401
MsG0580024317.01.T01 AT3G51950 41.102 472 184 18 210 670 126 514 5.44e-79 262
MsG0580024317.01.T01 AT3G51950 41.489 94 49 3 1 92 1 90 1.46e-11 67.8
MsG0580024317.01.T01 AT3G51950 41.102 472 184 18 210 670 126 514 5.44e-79 262
MsG0580024317.01.T01 AT3G51950 41.489 94 49 3 1 92 1 90 1.46e-11 67.8
MsG0580024317.01.T01 AT3G51950 41.102 472 184 18 210 670 126 514 5.44e-79 262
MsG0580024317.01.T01 AT3G51950 41.489 94 49 3 1 92 1 90 1.46e-11 67.8
MsG0580024317.01.T01 AT3G51950 41.102 472 184 18 210 670 126 514 5.44e-79 262
MsG0580024317.01.T01 AT3G51950 41.489 94 49 3 1 92 1 90 1.46e-11 67.8
MsG0580024317.01.T01 AT1G51520 34.259 648 262 25 7 647 7 497 1.88e-75 251
MsG0580024317.01.T01 AT1G51520 37.354 514 211 20 7 515 7 414 2.73e-73 243
MsG0580024317.01.T01 AT3G63450 50.233 215 72 5 329 543 16 195 3.58e-54 188
MsG0580024317.01.T01 AT3G63450 49.778 225 77 6 319 543 117 305 1.19e-53 190
MsG0580024317.01.T01 AT3G63450 49.778 225 77 6 319 543 117 305 1.19e-53 190
MsG0580024317.01.T01 AT3G63450 49.778 225 77 6 319 543 117 305 1.19e-53 190
MsG0580024317.01.T01 AT3G63450 49.778 225 75 6 319 543 117 303 1.36e-53 189
MsG0580024317.01.T01 AT3G63450 49.778 225 75 6 319 543 117 303 1.36e-53 189
MsG0580024317.01.T01 AT3G63450 49.778 225 77 6 319 543 117 305 1.40e-53 189
MsG0580024317.01.T01 AT2G05160 37.751 249 109 7 232 444 157 395 1.02e-37 148
MsG0580024317.01.T01 AT2G05160 37.751 249 109 7 232 444 157 395 1.02e-37 148
MsG0580024317.01.T01 AT2G05160 37.751 249 109 7 232 444 157 395 1.76e-37 146
MsG0580024317.01.T01 AT3G52980 37.443 219 91 10 232 424 165 363 8.38e-27 113
MsG0580024317.01.T01 AT1G51530 37.931 174 85 4 377 548 185 337 5.55e-21 96.3

Find 215 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTTTCTTGCTATGGTTTC+TGG 0.060082 5:+3312896 MsG0580024317.01.T01:CDS
GACTCTTCAGCCTCCTTTCT+TGG 0.133175 5:-3315031 None:intergenic
GTTTGTCACCTTTGTCTTTC+CGG 0.179944 5:+3314487 MsG0580024317.01.T01:CDS
CTCACTTCTGCTGGTTCTTT+AGG 0.186781 5:+3315294 MsG0580024317.01.T01:CDS
GGATTAAACTTTGGACTAAT+AGG 0.200781 5:-3312094 None:intergenic
CTATGATGAATAACATAAAA+TGG 0.205709 5:-3316214 None:intergenic
TTTGGACTAATAGGGTTCTT+TGG 0.231605 5:-3312085 None:intergenic
TCTTCATAACCTTGCTATTA+GGG 0.243813 5:+3311868 MsG0580024317.01.T01:CDS
GCAAGAAACTCATTCCTTTC+GGG 0.247828 5:-3312884 None:intergenic
CCTTCACCTCTTAACCCTAT+TGG 0.270082 5:+3311932 MsG0580024317.01.T01:CDS
TTCTTCATAACCTTGCTATT+AGG 0.270313 5:+3311867 MsG0580024317.01.T01:CDS
GCCTCCTTTCTTGGAGTTCA+AGG 0.288088 5:-3315022 None:intergenic
GGTTGATCCGCGTCTTGAAA+TGG 0.288113 5:+3312282 MsG0580024317.01.T01:CDS
GAAGAATATTTCAACATTAC+TGG 0.303045 5:+3312851 MsG0580024317.01.T01:CDS
ATATTCTCATAAGACATTAA+AGG 0.311072 5:-3312115 None:intergenic
TATCTTATTGAGAAGGAAAA+TGG 0.311434 5:+3314971 MsG0580024317.01.T01:CDS
TCTCTCTGTTGGTGCTCCTT+TGG 0.323983 5:+3315103 MsG0580024317.01.T01:CDS
ATCGGATTATTCTTGAAATC+TGG 0.325085 5:-3315062 None:intergenic
TCTGCAAATGATGCTAGTTT+TGG 0.328687 5:+3312373 MsG0580024317.01.T01:CDS
GCTGTTGGTGGCAGTGGTGC+TGG 0.330637 5:+3312145 MsG0580024317.01.T01:CDS
CATCACCTTCTGGTAATGTT+TGG 0.334098 5:+3312047 MsG0580024317.01.T01:CDS
AGCAAGAAACTCATTCCTTT+CGG 0.335824 5:-3312885 None:intergenic
TACCAGCAAAAGCGCATGTT+TGG 0.336745 5:+3314464 MsG0580024317.01.T01:CDS
TGCTGAGAGTGGGAATTTAA+AGG 0.339269 5:+3315386 MsG0580024317.01.T01:CDS
GATTAAACTTTGGACTAATA+GGG 0.340959 5:-3312093 None:intergenic
AAGATGTTTCGGAGTACTTC+AGG 0.343875 5:+3312987 MsG0580024317.01.T01:CDS
GTCGTCTAACGGCGATGATT+TGG 0.347901 5:+3312261 MsG0580024317.01.T01:CDS
TTACCAGTAGCCGTAGGTTT+TGG 0.348499 5:-3311588 None:intergenic
AGTTTCTTGCTATGGTTTCT+GGG 0.349367 5:+3312897 MsG0580024317.01.T01:CDS
TTTAAGTTCTTTACAATTCA+AGG 0.357372 5:+3315710 MsG0580024317.01.T01:exon
GATGAAGTGATTCTTCCAAT+AGG 0.362935 5:-3311947 None:intergenic
CACGTGAGTCACATATGAAA+TGG 0.366446 5:-3314544 None:intergenic
AAATCTCCTTGGATGTTATC+AGG 0.366797 5:-3315173 None:intergenic
GATGAAAGTGGATTGGGATT+TGG 0.371765 5:+3312400 MsG0580024317.01.T01:CDS
TTCACCCAAGTTTGAGGGAT+TGG 0.382468 5:+3312528 MsG0580024317.01.T01:CDS
ATTCAAAGATGAAGATGTTT+CGG 0.383022 5:+3312976 MsG0580024317.01.T01:CDS
AATAATTTGTTGTCTCAGAT+TGG 0.396338 5:-3316249 None:intergenic
ACCATGAACAAACTTACAAT+TGG 0.396580 5:-3312470 None:intergenic
CTCTCTGACGCTTCAAAGAT+AGG 0.396969 5:+3311477 MsG0580024317.01.T01:five_prime_UTR
GACATTAAAGGATTAAACTT+TGG 0.397652 5:-3312103 None:intergenic
AAATCTTCTCCTAGAGGAAC+TGG 0.399520 5:+3311989 MsG0580024317.01.T01:CDS
TATTAGGGTAAAGACCCATT+TGG 0.399912 5:+3311883 MsG0580024317.01.T01:CDS
GAACAAGTTCATATTCTTCA+AGG 0.400230 5:-3311820 None:intergenic
AGATCCACACTACAAAGAAT+TGG 0.402875 5:-3311443 None:intergenic
TGAATCGACAACATCTGCTT+CGG 0.405313 5:+3315669 MsG0580024317.01.T01:CDS
AGGAACCCTTCATCACCTTC+TGG 0.405702 5:+3312037 MsG0580024317.01.T01:CDS
TCCAATTGTAAGTTTGTTCA+TGG 0.406070 5:+3312469 MsG0580024317.01.T01:CDS
GTTGATCCGCGTCTTGAAAT+GGG 0.407371 5:+3312283 MsG0580024317.01.T01:CDS
TGGGCGTTGGTGGTCAGAAT+TGG 0.414377 5:+3312302 MsG0580024317.01.T01:CDS
TTAAGAGGTGAAGGTGAAGA+AGG 0.415332 5:-3311923 None:intergenic
ATTAGGGTAAAGACCCATTT+GGG 0.415903 5:+3311884 MsG0580024317.01.T01:CDS
GTACTCTCATTAGCCACTTC+CGG 0.418314 5:-3315616 None:intergenic
ATGCTTCTCTAGGATGATCT+AGG 0.420612 5:-3316048 None:intergenic
ATATTTCAACATTACTGGTC+GGG 0.426560 5:+3312856 MsG0580024317.01.T01:CDS
CGCAAATGCTGCCGCAGCCA+CGG 0.428719 5:-3312822 None:intergenic
TGAATTGTAAAGAACTTAAA+CGG 0.431400 5:-3315707 None:intergenic
GAATCGACAACATCTGCTTC+GGG 0.431778 5:+3315670 MsG0580024317.01.T01:CDS
GATTCGATTGATGCAAATTC+CGG 0.432753 5:+3312493 MsG0580024317.01.T01:CDS
TTGTTCCAATCCCTCAAACT+TGG 0.434886 5:-3312533 None:intergenic
ACGTGAGTCACATATGAAAT+GGG 0.436440 5:-3314543 None:intergenic
GAGTAAAGGGTATCAAGAAA+TGG 0.437128 5:-3311635 None:intergenic
CAAGGTGCTGTTGGTGGCAG+TGG 0.437766 5:+3312139 MsG0580024317.01.T01:CDS
ATGAAGTGATTCTTCCAATA+GGG 0.438078 5:-3311946 None:intergenic
CAAATTGCTGCTGCTGATGT+TGG 0.441947 5:-3314698 None:intergenic
TGTTGGTTCACCCAAGTTTG+AGG 0.444572 5:+3312522 MsG0580024317.01.T01:CDS
GGTGTTGATGAAAGTGGATT+GGG 0.445623 5:+3312394 MsG0580024317.01.T01:CDS
ATTCTTCCAATAGGGTTAAG+AGG 0.447622 5:-3311938 None:intergenic
ACCAGCAAAAGCGCATGTTT+GGG 0.448689 5:+3314465 MsG0580024317.01.T01:CDS
GTTGGTTCACCCAAGTTTGA+GGG 0.449991 5:+3312523 MsG0580024317.01.T01:CDS
AAGAGGCAAGCAAGGGGAGG+GGG 0.450881 5:+3315833 MsG0580024317.01.T01:three_prime_UTR
AATGCTTGAAAGAGAGTAAA+GGG 0.455379 5:-3311648 None:intergenic
TCTTTGAATGTGCTTTCAGC+AGG 0.457800 5:-3312962 None:intergenic
TGGTGTTGATGAAAGTGGAT+TGG 0.458084 5:+3312393 MsG0580024317.01.T01:CDS
GGTAAGGAATTCTCACATCT+TGG 0.459599 5:-3314445 None:intergenic
GCTGCATCACAACTTGCTGC+TGG 0.462022 5:+3312607 MsG0580024317.01.T01:CDS
TAGATAGGTTCATACCCAAA+TGG 0.462403 5:-3311898 None:intergenic
CGTCTTGAAATGGGCGTTGG+TGG 0.465802 5:+3312292 MsG0580024317.01.T01:CDS
TATGATGAATAACATAAAAT+GGG 0.467432 5:-3316213 None:intergenic
TAAGAGGTGAAGGTGAAGAA+GGG 0.469413 5:-3311922 None:intergenic
TGATTTCTCTCCACCGGAAG+TGG 0.471635 5:+3315603 MsG0580024317.01.T01:CDS
AATAGGGTTCTTTGGAAAAG+AGG 0.473814 5:-3312077 None:intergenic
ATCTGCCGCGAAGCCGAGTT+AGG 0.473872 5:-3312926 None:intergenic
AAGGAATGAGTTTCTTGCTA+TGG 0.474746 5:+3312889 MsG0580024317.01.T01:CDS
GCTACTGCTGCTGCTGAGAG+TGG 0.476207 5:+3315375 MsG0580024317.01.T01:CDS
AAGGTGAAGAAGGGGTAGAT+AGG 0.478323 5:-3311913 None:intergenic
AGTGGCAGCCTCACTTCTGC+TGG 0.479574 5:+3315285 MsG0580024317.01.T01:CDS
TTTAGCATGTTGTCCTGACC+AGG 0.479663 5:+3311844 MsG0580024317.01.T01:CDS
AGGTTATGAAGAACCTGGTC+AGG 0.480573 5:-3311857 None:intergenic
CCACCAAAACCTACGGCTAC+TGG 0.483036 5:+3311585 MsG0580024317.01.T01:five_prime_UTR
GAGAAGGAAAATGGAGGAGC+AGG 0.484754 5:+3314980 MsG0580024317.01.T01:CDS
CTAGAGAAGCATCAAAACTA+AGG 0.485524 5:+3316059 MsG0580024317.01.T01:three_prime_UTR
CTGCGCTGGTGGTGGTGAAT+CGG 0.486467 5:-3315080 None:intergenic
GGTGAAGCAAAGAGACTGTC+AGG 0.486964 5:-3315553 None:intergenic
AAGATGTCAACTTACTTGTC+AGG 0.488252 5:-3314602 None:intergenic
TCCGTCTGATTTCTCTCCAC+CGG 0.488582 5:+3315597 MsG0580024317.01.T01:CDS
AGGTGCTGCATCTGAGCAGC+AGG 0.492634 5:+3315314 MsG0580024317.01.T01:CDS
AGAAAATAGGTACATAATGA+TGG 0.493862 5:-3316298 None:intergenic
ATGTACTTGTCGTACGATAC+CGG 0.495797 5:-3312640 None:intergenic
ACAAGAGGCAAGCAAGGGGA+GGG 0.496163 5:+3315831 MsG0580024317.01.T01:three_prime_UTR
GCAAATTCCGGTGCTGTTGT+TGG 0.496350 5:+3312505 MsG0580024317.01.T01:CDS
GAGAAATTTGATTACCAGGA+TGG 0.500480 5:-3314785 None:intergenic
TTACCAGGATGGAAATCAAA+AGG 0.503183 5:-3314774 None:intergenic
GCTTCACCAACAAAAGCAGC+TGG 0.504326 5:+3315568 MsG0580024317.01.T01:CDS
CAAGAGGCAAGCAAGGGGAG+GGG 0.506271 5:+3315832 MsG0580024317.01.T01:three_prime_UTR
ACTAACCTGTAAAATCTCCT+TGG 0.506306 5:-3315184 None:intergenic
AGATAGGTTCATACCCAAAT+GGG 0.506648 5:-3311897 None:intergenic
CATGTCTTTACTTTGCTAGA+GGG 0.506660 5:+3312431 MsG0580024317.01.T01:CDS
AATATGACTCTCACTGTCTC+CGG 0.508178 5:-3314506 None:intergenic
TCAACATTACTGGTCGGGGC+AGG 0.511014 5:+3312861 MsG0580024317.01.T01:CDS
ATAGGGTTCTTTGGAAAAGA+GGG 0.511296 5:-3312076 None:intergenic
GGTGGTCAGAATTGGATCTC+TGG 0.511430 5:+3312310 MsG0580024317.01.T01:CDS
CTACTGCTGCTGCTGAGAGT+GGG 0.512956 5:+3315376 MsG0580024317.01.T01:CDS
TAATCACCATTATTAACCCT+TGG 0.513837 5:-3312187 None:intergenic
TGTTCCAATCCCTCAAACTT+GGG 0.514806 5:-3312532 None:intergenic
ACATTACCAGAAGGTGATGA+AGG 0.516499 5:-3312043 None:intergenic
GAATGTGCTTTCAGCAGGAA+AGG 0.517326 5:-3312957 None:intergenic
TGAAGAGTTCATGAGGTTCA+AGG 0.521920 5:+3312558 MsG0580024317.01.T01:CDS
TTTCTCAATGAGTCGTCTAA+CGG 0.522774 5:+3312250 MsG0580024317.01.T01:CDS
TAACATGGCTATGAAGTTGA+TGG 0.523547 5:-3315133 None:intergenic
CCATGTCTTTACTTTGCTAG+AGG 0.529183 5:+3312430 MsG0580024317.01.T01:CDS
TGCTGCTGGTGGAACATCAC+CGG 0.530369 5:+3312621 MsG0580024317.01.T01:CDS
AGAGGAACTGGACTTAGTAA+TGG 0.530744 5:+3312001 MsG0580024317.01.T01:CDS
AAGAGGTGAAGGTGAAGAAG+GGG 0.530887 5:-3311921 None:intergenic
TGCAATATGTATTGCTTGGT+CGG 0.533943 5:-3316125 None:intergenic
CTGGTCGGGGCAGGCCCGAA+AGG 0.534386 5:+3312870 MsG0580024317.01.T01:CDS
AACATGGCTATGAAGTTGAT+GGG 0.534397 5:-3315132 None:intergenic
CTTCTCAATAAGATATCATG+TGG 0.536105 5:-3314963 None:intergenic
TTACTAAGTCCAGTTCCTCT+AGG 0.536989 5:-3311998 None:intergenic
TTATCCAATTCTTTGTAGTG+TGG 0.538684 5:+3311439 MsG0580024317.01.T01:five_prime_UTR
AAAACCTACGGCTACTGGTA+AGG 0.538757 5:+3311590 MsG0580024317.01.T01:five_prime_UTR
ATGCTCATAATATTCATAAG+AGG 0.539122 5:+3312344 MsG0580024317.01.T01:CDS
GGCTGCGGCAGCATTTGCGA+TGG 0.539812 5:+3312826 MsG0580024317.01.T01:CDS
AAGGATGTTGCAAAGTCTGA+AGG 0.540390 5:+3315405 MsG0580024317.01.T01:CDS
TATTTCAACATTACTGGTCG+GGG 0.542341 5:+3312857 MsG0580024317.01.T01:CDS
GCATCACAACTTGCTGCTGG+TGG 0.543311 5:+3312610 MsG0580024317.01.T01:CDS
CATAGCCATGTTAACCATGC+AGG 0.544634 5:+3315143 MsG0580024317.01.T01:CDS
TTCTGGGGACAAGCCTAACT+CGG 0.544864 5:+3312913 MsG0580024317.01.T01:CDS
TGATTGATGATTGATGATGA+TGG 0.545525 5:-3316085 None:intergenic
AAATGCTTGAAAGAGAGTAA+AGG 0.549806 5:-3311649 None:intergenic
CACCAGCGCAGTCTCTCTGT+TGG 0.552012 5:+3315092 MsG0580024317.01.T01:CDS
AGCAATACATATTGCATACA+TGG 0.552154 5:+3316132 MsG0580024317.01.T01:three_prime_UTR
ACATTTCAGAGCCGTGGCTG+CGG 0.553398 5:+3312811 MsG0580024317.01.T01:intron
ATCTGCTTCGGGTGACAACA+TGG 0.554785 5:+3315681 MsG0580024317.01.T01:CDS
TTGTTGACTCTACAGAAATG+TGG 0.554888 5:+3315519 MsG0580024317.01.T01:intron
TGCTCAGCAGCATCAAAGAA+TGG 0.555393 5:+3312582 MsG0580024317.01.T01:CDS
AAGTCCTTGAACTCCAAGAA+AGG 0.556107 5:+3315018 MsG0580024317.01.T01:CDS
GAAGGCGTAGATCTCGGCAT+GGG 0.556601 5:+3315423 MsG0580024317.01.T01:CDS
AAGTCTGAAGGCGTAGATCT+CGG 0.557200 5:+3315417 MsG0580024317.01.T01:CDS
CACATGATATCTTATTGAGA+AGG 0.557830 5:+3314964 MsG0580024317.01.T01:CDS
CACTGCCACCAACAGCACCT+TGG 0.559329 5:-3312138 None:intergenic
AATATTTCAACATTACTGGT+CGG 0.562602 5:+3312855 MsG0580024317.01.T01:CDS
TACAAGAGGCAAGCAAGGGG+AGG 0.562749 5:+3315830 MsG0580024317.01.T01:three_prime_UTR
ATAACATAAAATGGGAAAGG+AGG 0.563680 5:-3316205 None:intergenic
AAAGACCTGCATGGTTAACA+TGG 0.565559 5:-3315148 None:intergenic
GGAATTCTCACATCTTGGAC+AGG 0.567021 5:-3314440 None:intergenic
GTTTCTTGCTATGGTTTCTG+GGG 0.567026 5:+3312898 MsG0580024317.01.T01:CDS
TATGTTACATTTCAGAGCCG+TGG 0.567197 5:+3312805 MsG0580024317.01.T01:intron
CAACAGAGAGACTGCGCTGG+TGG 0.569130 5:-3315091 None:intergenic
CCAATAGGGTTAAGAGGTGA+AGG 0.570288 5:-3311932 None:intergenic
GACTTTAGCAAGAACCACAT+TGG 0.572181 5:-3311744 None:intergenic
TACATATTGCATACATGGAT+AGG 0.572521 5:+3316137 MsG0580024317.01.T01:three_prime_UTR
TGAATAACATAAAATGGGAA+AGG 0.574733 5:-3316208 None:intergenic
GAGAATATCCAAGGTGCTGT+TGG 0.575381 5:+3312130 MsG0580024317.01.T01:CDS
TTAGACGACTCATTGAGAAA+AGG 0.576395 5:-3312247 None:intergenic
AAAATACAAGAGGCAAGCAA+GGG 0.581659 5:+3315826 MsG0580024317.01.T01:three_prime_UTR
CACTGTCTCCGGAAAGACAA+AGG 0.581924 5:-3314495 None:intergenic
TGTGAAACCCTACAAGGAGA+AGG 0.583303 5:+3314571 MsG0580024317.01.T01:CDS
TCCTTGAACTCCAAGAAAGG+AGG 0.583568 5:+3315021 MsG0580024317.01.T01:CDS
CCGCGTCTTGAAATGGGCGT+TGG 0.584382 5:+3312289 MsG0580024317.01.T01:CDS
ATGTCTTATGAGAATATCCA+AGG 0.586654 5:+3312121 MsG0580024317.01.T01:CDS
CTTTCCATTGCAGGCTACAG+TGG 0.586758 5:+3315267 MsG0580024317.01.T01:intron
CTTTCTCCTGATAACATCCA+AGG 0.587933 5:+3315167 MsG0580024317.01.T01:CDS
CAGAGAGACTGCGCTGGTGG+TGG 0.594991 5:-3315088 None:intergenic
GTTGGTGGCAGTGGTGCTGG+TGG 0.595287 5:+3312148 MsG0580024317.01.T01:CDS
ACAAGCCTAACTCGGCTTCG+CGG 0.597420 5:+3312921 MsG0580024317.01.T01:CDS
GCTGCGGCAGCATTTGCGAT+GGG 0.597928 5:+3312827 MsG0580024317.01.T01:CDS
AAGCAAAGAGACTGTCAGGA+AGG 0.599815 5:-3315549 None:intergenic
TCTTTAGAGTCAAACGCAGA+GGG 0.601397 5:-3314750 None:intergenic
TAGCAAGGTTATGAAGAACC+TGG 0.603647 5:-3311862 None:intergenic
GTGAGAGTCATATTATCGAA+AGG 0.603657 5:+3314515 MsG0580024317.01.T01:CDS
GGGTCTTTACCCTAATAGCA+AGG 0.608257 5:-3311877 None:intergenic
GGGTGAACCAACAACAGCAC+CGG 0.609002 5:-3312512 None:intergenic
TCAGCAGCAGCAATTTGAGA+GGG 0.609147 5:+3314704 MsG0580024317.01.T01:CDS
CCTCTAGCAAAGTAAAGACA+TGG 0.612058 5:-3312430 None:intergenic
GTGAAACCCTACAAGGAGAA+GGG 0.615151 5:+3314572 MsG0580024317.01.T01:CDS
CATTACCAGAAGGTGATGAA+GGG 0.615959 5:-3312042 None:intergenic
AGCAGCACAGTGATAATCAA+AGG 0.615972 5:+3312677 MsG0580024317.01.T01:CDS
TGTATGCAATATGTATTGCT+TGG 0.617673 5:-3316129 None:intergenic
CTCTCATTAGCCACTTCCGG+TGG 0.619392 5:-3315613 None:intergenic
AGCAAAGAGACTGTCAGGAA+GGG 0.620621 5:-3315548 None:intergenic
AATTGGATCTCTGGTAACAA+TGG 0.622958 5:+3312319 MsG0580024317.01.T01:CDS
ATCAGCAGCAGCAATTTGAG+AGG 0.624147 5:+3314703 MsG0580024317.01.T01:CDS
TGTGCTTGTGAAACCCTACA+AGG 0.627297 5:+3314565 MsG0580024317.01.T01:CDS
TGTATAGCCACCAAAACCTA+CGG 0.627885 5:+3311578 MsG0580024317.01.T01:five_prime_UTR
TCCGGTGGAGAGAAATCAGA+CGG 0.628112 5:-3315598 None:intergenic
GTAGCAGCATCAATGCAAGA+TGG 0.631513 5:-3315357 None:intergenic
CACCAACAGAGAGACTGCGC+TGG 0.632218 5:-3315094 None:intergenic
CTAAAGAACCAGCAGAAGTG+AGG 0.639544 5:-3315293 None:intergenic
AACAACATGAAGAGTTCATG+AGG 0.641597 5:+3312551 MsG0580024317.01.T01:CDS
TTCTTTAGAGTCAAACGCAG+AGG 0.643087 5:-3314751 None:intergenic
AATATCCAAGGTGCTGTTGG+TGG 0.644306 5:+3312133 MsG0580024317.01.T01:CDS
TGAAGGCGTAGATCTCGGCA+TGG 0.644522 5:+3315422 MsG0580024317.01.T01:CDS
CTTATTGAGAAGGAAAATGG+AGG 0.653298 5:+3314974 MsG0580024317.01.T01:CDS
ACATGGCTATGAAGTTGATG+GGG 0.654909 5:-3315131 None:intergenic
TTCTTATGAAGCAACCAATG+TGG 0.670186 5:+3311730 MsG0580024317.01.T01:CDS
AAGGCGTAGATCTCGGCATG+GGG 0.671195 5:+3315424 MsG0580024317.01.T01:CDS
TCAGCAGCATCAAAGAATGG+TGG 0.671588 5:+3312585 MsG0580024317.01.T01:CDS
CGTGAGTCACATATGAAATG+GGG 0.678147 5:-3314542 None:intergenic
AAATACAAGAGGCAAGCAAG+GGG 0.680528 5:+3315827 MsG0580024317.01.T01:three_prime_UTR
AACGCAGAGGGACTTAAACA+TGG 0.682483 5:-3314738 None:intergenic
CCAACGCCCATTTCAAGACG+CGG 0.684511 5:-3312289 None:intergenic
CAGCAGCAGCAATTTGAGAG+GGG 0.685988 5:+3314705 MsG0580024317.01.T01:CDS
TATCAGGAGAAAGACCTGCA+TGG 0.700183 5:-3315157 None:intergenic
TGTGACCAAACATTACCAGA+AGG 0.700366 5:-3312052 None:intergenic
CATACCTTACCAGTAGCCGT+AGG 0.703434 5:-3311594 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGTTTTAATATTATGTA+TGG + Chr5:3312781-3312800 MsG0580024317.01.T01:intron 10.0%
!!! TATTTATGTATTTATTTCTT+AGG + Chr5:3315763-3315782 MsG0580024317.01.T01:intron 10.0%
!! GATCGTATTTATATTTATAT+CGG + Chr5:3315473-3315492 MsG0580024317.01.T01:intron 15.0%
!! TATGATGAATAACATAAAAT+GGG - Chr5:3316216-3316235 None:intergenic 15.0%
!! TTGTTAATGTTATTCTTATT+TGG + Chr5:3313755-3313774 MsG0580024317.01.T01:intron 15.0%
!!! ATTACGATTTTATGAATAAT+AGG + Chr5:3314079-3314098 MsG0580024317.01.T01:intron 15.0%
!! AAGGTATATTTCTTATAGAT+GGG + Chr5:3312696-3312715 MsG0580024317.01.T01:intron 20.0%
!! ATATTCTCATAAGACATTAA+AGG - Chr5:3312118-3312137 None:intergenic 20.0%
!! CTATGATGAATAACATAAAA+TGG - Chr5:3316217-3316236 None:intergenic 20.0%
!! TGAATTGTAAAGAACTTAAA+CGG - Chr5:3315710-3315729 None:intergenic 20.0%
!! TTAAATTGCATAATGATGAA+GGG - Chr5:3313385-3313404 None:intergenic 20.0%
!!! AAAGGTATATTTCTTATAGA+TGG + Chr5:3312695-3312714 MsG0580024317.01.T01:intron 20.0%
!!! AAATGAATATTGATTTGTCA+AGG + Chr5:3313852-3313871 MsG0580024317.01.T01:intron 20.0%
!!! AAGATTTGATTTTTCACTAA+TGG + Chr5:3311706-3311725 MsG0580024317.01.T01:exon 20.0%
!!! AATGAATATTGATTTGTCAA+GGG + Chr5:3313853-3313872 MsG0580024317.01.T01:intron 20.0%
!!! AATTTTTTGTACCTATCATT+AGG + Chr5:3314238-3314257 MsG0580024317.01.T01:intron 20.0%
!!! AGATTTGATTTTTCACTAAT+GGG + Chr5:3311707-3311726 MsG0580024317.01.T01:exon 20.0%
!!! TTGTTATTTTGAAGCAAATT+TGG + Chr5:3314416-3314435 MsG0580024317.01.T01:intron 20.0%
!!! TTTAAGTTCTTTACAATTCA+AGG + Chr5:3315710-3315729 MsG0580024317.01.T01:exon 20.0%
! AAAAGACACATTACTTAGTT+AGG - Chr5:3313311-3313330 None:intergenic 25.0%
! AAGGATAAATGAGTGAAAAA+AGG - Chr5:3315892-3315911 None:intergenic 25.0%
! AAGTAAACAACAAACTAAAG+AGG - Chr5:3312727-3312746 None:intergenic 25.0%
! AATATTTCAACATTACTGGT+CGG + Chr5:3312855-3312874 MsG0580024317.01.T01:CDS 25.0%
! AGAGGAAAAAGGAAAATTTA+TGG - Chr5:3314867-3314886 None:intergenic 25.0%
! ATATTGCCATTAATTATTCC+AGG + Chr5:3313133-3313152 MsG0580024317.01.T01:intron 25.0%
! ATGCTCATAATATTCATAAG+AGG + Chr5:3312344-3312363 MsG0580024317.01.T01:CDS 25.0%
! ATTCAAAGATGAAGATGTTT+CGG + Chr5:3312976-3312995 MsG0580024317.01.T01:CDS 25.0%
! ATTCCCGAATTGATATTATT+GGG + Chr5:3314652-3314671 MsG0580024317.01.T01:intron 25.0%
! CTTAAATTGCATAATGATGA+AGG - Chr5:3313386-3313405 None:intergenic 25.0%
! GAAAATGCTTCAAAAATCAT+GGG + Chr5:3311782-3311801 MsG0580024317.01.T01:CDS 25.0%
! GAAGAATATTTCAACATTAC+TGG + Chr5:3312851-3312870 MsG0580024317.01.T01:CDS 25.0%
! GACATTAAAGGATTAAACTT+TGG - Chr5:3312106-3312125 None:intergenic 25.0%
! GATTAAACTTTGGACTAATA+GGG - Chr5:3312096-3312115 None:intergenic 25.0%
! GTAGGTAATAAAAATACAAG+AGG + Chr5:3315816-3315835 MsG0580024317.01.T01:intron 25.0%
! TACTTCATTTGTAACTAACA+TGG - Chr5:3313966-3313985 None:intergenic 25.0%
! TAGTCCCAATAATATCAATT+CGG - Chr5:3314659-3314678 None:intergenic 25.0%
! TATATCACCTTATCATAGAT+AGG + Chr5:3313062-3313081 MsG0580024317.01.T01:intron 25.0%
! TATCTTATTGAGAAGGAAAA+TGG + Chr5:3314971-3314990 MsG0580024317.01.T01:CDS 25.0%
! TATTCCCGAATTGATATTAT+TGG + Chr5:3314651-3314670 MsG0580024317.01.T01:intron 25.0%
! TGAAAATGCTTCAAAAATCA+TGG + Chr5:3311781-3311800 MsG0580024317.01.T01:CDS 25.0%
! TGAATAACATAAAATGGGAA+AGG - Chr5:3316211-3316230 None:intergenic 25.0%
!! AAATAGATTTTCCGTGTATT+TGG - Chr5:3313885-3313904 None:intergenic 25.0%
!! CGATTTTATGAATAATAGGA+TGG + Chr5:3314083-3314102 MsG0580024317.01.T01:intron 25.0%
!! TGAGTTTGCTTGATAATTAA+GGG + Chr5:3313348-3313367 MsG0580024317.01.T01:intron 25.0%
!! TGTAACGTTCTTTTTGTATT+AGG + Chr5:3313474-3313493 MsG0580024317.01.T01:intron 25.0%
!! TTGAGTTTGCTTGATAATTA+AGG + Chr5:3313347-3313366 MsG0580024317.01.T01:intron 25.0%
!! TTTAAAATGTTACCTTCTGA+GGG - Chr5:3314143-3314162 None:intergenic 25.0%
!!! AATAATTTGTTGTCTCAGAT+TGG - Chr5:3316252-3316271 None:intergenic 25.0%
!!! ACATTTATTTTCACCTGTAA+AGG - Chr5:3315911-3315930 None:intergenic 25.0%
!!! AGATTTTGAAAAAGGGTTAT+TGG - Chr5:3311975-3311994 None:intergenic 25.0%
!!! ATGAATATTGATTTGTCAAG+GGG + Chr5:3313854-3313873 MsG0580024317.01.T01:intron 25.0%
!!! ATGATTTTTGAAGCATTTTC+AGG - Chr5:3311782-3311801 None:intergenic 25.0%
!!! CATCTAAGATTTTGAATTGT+AGG + Chr5:3315798-3315817 MsG0580024317.01.T01:intron 25.0%
!!! TAGGAGAAGATTTTGAAAAA+GGG - Chr5:3311982-3312001 None:intergenic 25.0%
!!! TGATTTTTGAAGCATTTTCA+GGG - Chr5:3311781-3311800 None:intergenic 25.0%
AAACTCAAATCAATCAAGGA+TGG - Chr5:3313335-3313354 None:intergenic 30.0%
AAATGCTTGAAAGAGAGTAA+AGG - Chr5:3311652-3311671 None:intergenic 30.0%
AAGCAAACTCAAATCAATCA+AGG - Chr5:3313339-3313358 None:intergenic 30.0%
AATGCTTGAAAGAGAGTAAA+GGG - Chr5:3311651-3311670 None:intergenic 30.0%
AATTTAAGCTCAGTAATCAC+TGG + Chr5:3313398-3313417 MsG0580024317.01.T01:intron 30.0%
ACCATGAACAAACTTACAAT+TGG - Chr5:3312473-3312492 None:intergenic 30.0%
AGAACGTTACACATAAAACA+CGG - Chr5:3313465-3313484 None:intergenic 30.0%
AGCAATACATATTGCATACA+TGG + Chr5:3316132-3316151 MsG0580024317.01.T01:three_prime_UTR 30.0%
AGTCCCAATAATATCAATTC+GGG - Chr5:3314658-3314677 None:intergenic 30.0%
ATAACATAAAATGGGAAAGG+AGG - Chr5:3316208-3316227 None:intergenic 30.0%
ATAACTATTAAGCGTTCTTG+CGG + Chr5:3314184-3314203 MsG0580024317.01.T01:intron 30.0%
ATATTTCAACATTACTGGTC+GGG + Chr5:3312856-3312875 MsG0580024317.01.T01:CDS 30.0%
ATCGGATTATTCTTGAAATC+TGG - Chr5:3315065-3315084 None:intergenic 30.0%
ATGAAGTGATTCTTCCAATA+GGG - Chr5:3311949-3311968 None:intergenic 30.0%
ATGTCTTATGAGAATATCCA+AGG + Chr5:3312121-3312140 MsG0580024317.01.T01:CDS 30.0%
ATTTCCAACTGAAAGAACAT+TGG + Chr5:3313901-3313920 MsG0580024317.01.T01:intron 30.0%
CACATGATATCTTATTGAGA+AGG + Chr5:3314964-3314983 MsG0580024317.01.T01:CDS 30.0%
CGAATAACCTATCTATGATA+AGG - Chr5:3313072-3313091 None:intergenic 30.0%
CTTCTCAATAAGATATCATG+TGG - Chr5:3314966-3314985 None:intergenic 30.0%
GAACAAGTTCATATTCTTCA+AGG - Chr5:3311823-3311842 None:intergenic 30.0%
GACTTCTAAACTATGTTAAC+AGG - Chr5:3313821-3313840 None:intergenic 30.0%
GGATTAAACTTTGGACTAAT+AGG - Chr5:3312097-3312116 None:intergenic 30.0%
GTGTTTATTTGTGAACCATA+GGG + Chr5:3314110-3314129 MsG0580024317.01.T01:intron 30.0%
TAATCACCATTATTAACCCT+TGG - Chr5:3312190-3312209 None:intergenic 30.0%
TACATATTGCATACATGGAT+AGG + Chr5:3316137-3316156 MsG0580024317.01.T01:three_prime_UTR 30.0%
TCTTATTGCATCTTTACAGA+AGG + Chr5:3314369-3314388 MsG0580024317.01.T01:intron 30.0%
TGTATGCAATATGTATTGCT+TGG - Chr5:3316132-3316151 None:intergenic 30.0%
TGTGTTTATTTGTGAACCAT+AGG + Chr5:3314109-3314128 MsG0580024317.01.T01:intron 30.0%
TTAGGTAGGTTCTTACTTAT+AGG + Chr5:3314256-3314275 MsG0580024317.01.T01:intron 30.0%
TTATCCAATTCTTTGTAGTG+TGG + Chr5:3311439-3311458 MsG0580024317.01.T01:five_prime_UTR 30.0%
TTCACTCATTTATCCTTTAC+AGG + Chr5:3315895-3315914 MsG0580024317.01.T01:intron 30.0%
TTGTTCATTTATGTGTCAGA+AGG - Chr5:3314220-3314239 None:intergenic 30.0%
! CTCAGAAGGTAACATTTTAA+AGG + Chr5:3314142-3314161 MsG0580024317.01.T01:intron 30.0%
! GATAATTAAGGGTTTTCAAC+TGG + Chr5:3313359-3313378 MsG0580024317.01.T01:intron 30.0%
! TCCAATTGTAAGTTTGTTCA+TGG + Chr5:3312469-3312488 MsG0580024317.01.T01:CDS 30.0%
! TCTTTACAATTCAAGGTACT+TGG + Chr5:3315717-3315736 MsG0580024317.01.T01:intron 30.0%
! TTTTCAAAATCTTCTCCTAG+AGG + Chr5:3311983-3312002 MsG0580024317.01.T01:CDS 30.0%
! TTTTCACCAAGGGTTAATAA+TGG + Chr5:3312181-3312200 MsG0580024317.01.T01:CDS 30.0%
! TTTTGTACCTATCATTAGGT+AGG + Chr5:3314242-3314261 MsG0580024317.01.T01:intron 30.0%
!! CAAATATTCTCTTTAAAGCG+TGG - Chr5:3313161-3313180 None:intergenic 30.0%
!! CGCTTTAAAGAGAATATTTG+CGG + Chr5:3313161-3313180 MsG0580024317.01.T01:intron 30.0%
!! CTAGGAGAAGATTTTGAAAA+AGG - Chr5:3311983-3312002 None:intergenic 30.0%
!! CTTTAAAATGTTACCTTCTG+AGG - Chr5:3314144-3314163 None:intergenic 30.0%
!! TCTTCATAACCTTGCTATTA+GGG + Chr5:3311868-3311887 MsG0580024317.01.T01:CDS 30.0%
!! TGATTGATGATTGATGATGA+TGG - Chr5:3316088-3316107 None:intergenic 30.0%
!! TTCTTCATAACCTTGCTATT+AGG + Chr5:3311867-3311886 MsG0580024317.01.T01:CDS 30.0%
!!! GTAATGGTTTTGACTTCAAT+AGG + Chr5:3312017-3312036 MsG0580024317.01.T01:CDS 30.0%
AAAAATACAAGAGGCAAGCA+AGG + Chr5:3315825-3315844 MsG0580024317.01.T01:three_prime_UTR 35.0%
AAAATACAAGAGGCAAGCAA+GGG + Chr5:3315826-3315845 MsG0580024317.01.T01:three_prime_UTR 35.0%
AAATCTCCTTGGATGTTATC+AGG - Chr5:3315176-3315195 None:intergenic 35.0%
AACAACATGAAGAGTTCATG+AGG + Chr5:3312551-3312570 MsG0580024317.01.T01:CDS 35.0%
AAGATGTCAACTTACTTGTC+AGG - Chr5:3314605-3314624 None:intergenic 35.0%
AAGGAATGAGTTTCTTGCTA+TGG + Chr5:3312889-3312908 MsG0580024317.01.T01:CDS 35.0%
AAGTTCATGTACTACTAGCA+TGG - Chr5:3313991-3314010 None:intergenic 35.0%
AATTGGATCTCTGGTAACAA+TGG + Chr5:3312319-3312338 MsG0580024317.01.T01:CDS 35.0%
ACAACCAATGTTCTTTCAGT+TGG - Chr5:3313908-3313927 None:intergenic 35.0%
ACATTACTTAGTTAGGAGTC+AGG - Chr5:3313304-3313323 None:intergenic 35.0%
ACGTGAGTCACATATGAAAT+GGG - Chr5:3314546-3314565 None:intergenic 35.0%
ACTAACCTGTAAAATCTCCT+TGG - Chr5:3315187-3315206 None:intergenic 35.0%
AGAACTACACCATAGTATAC+AGG - Chr5:3315210-3315229 None:intergenic 35.0%
AGATAGGTTCATACCCAAAT+GGG - Chr5:3311900-3311919 None:intergenic 35.0%
AGATCCACACTACAAAGAAT+TGG - Chr5:3311446-3311465 None:intergenic 35.0%
AGCAAGAAACTCATTCCTTT+CGG - Chr5:3312888-3312907 None:intergenic 35.0%
AGGTGAGAAATTTGATTACC+AGG - Chr5:3314792-3314811 None:intergenic 35.0%
AGTGATACCTGAAAATGTAC+AGG - Chr5:3313552-3313571 None:intergenic 35.0%
ATCAAAAATCCATCTTCCCT+AGG - Chr5:3313265-3313284 None:intergenic 35.0%
ATTAGGGTAAAGACCCATTT+GGG + Chr5:3311884-3311903 MsG0580024317.01.T01:CDS 35.0%
ATTCTTCCAATAGGGTTAAG+AGG - Chr5:3311941-3311960 None:intergenic 35.0%
CATGTCTTTACTTTGCTAGA+GGG + Chr5:3312431-3312450 MsG0580024317.01.T01:CDS 35.0%
CTTATTGAGAAGGAAAATGG+AGG + Chr5:3314974-3314993 MsG0580024317.01.T01:CDS 35.0%
GAGAAATTTGATTACCAGGA+TGG - Chr5:3314788-3314807 None:intergenic 35.0%
GAGGGGGATCATATTAATTA+GGG + Chr5:3315849-3315868 MsG0580024317.01.T01:three_prime_UTR 35.0%
GATGAAGTGATTCTTCCAAT+AGG - Chr5:3311950-3311969 None:intergenic 35.0%
GATTCGATTGATGCAAATTC+CGG + Chr5:3312493-3312512 MsG0580024317.01.T01:CDS 35.0%
GGTAATCAAATTTCTCACCT+TGG + Chr5:3314792-3314811 MsG0580024317.01.T01:intron 35.0%
GTAAGAACCTACCTAATGAT+AGG - Chr5:3314252-3314271 None:intergenic 35.0%
GTAAGCTGTTAAAACCATGT+TGG - Chr5:3315235-3315254 None:intergenic 35.0%
GTGAGAGTCATATTATCGAA+AGG + Chr5:3314515-3314534 MsG0580024317.01.T01:CDS 35.0%
GTGGAACCTGGAATAATTAA+TGG - Chr5:3313142-3313161 None:intergenic 35.0%
GTTAACATACTTTCCATTGC+AGG + Chr5:3315258-3315277 MsG0580024317.01.T01:intron 35.0%
GTTATTGCAATCATGACATC+TGG + Chr5:3314281-3314300 MsG0580024317.01.T01:intron 35.0%
TAACATGGCTATGAAGTTGA+TGG - Chr5:3315136-3315155 None:intergenic 35.0%
TAGATAGGTTCATACCCAAA+TGG - Chr5:3311901-3311920 None:intergenic 35.0%
TATTAGGGTAAAGACCCATT+TGG + Chr5:3311883-3311902 MsG0580024317.01.T01:CDS 35.0%
TATTTCAACATTACTGGTCG+GGG + Chr5:3312857-3312876 MsG0580024317.01.T01:CDS 35.0%
TCAAAAATCCATCTTCCCTA+GGG - Chr5:3313264-3313283 None:intergenic 35.0%
TGCAATATGTATTGCTTGGT+CGG - Chr5:3316128-3316147 None:intergenic 35.0%
TTACCAGGATGGAAATCAAA+AGG - Chr5:3314777-3314796 None:intergenic 35.0%
TTAGACGACTCATTGAGAAA+AGG - Chr5:3312250-3312269 None:intergenic 35.0%
TTATTCGCGCATACATGAAA+TGG + Chr5:3313085-3313104 MsG0580024317.01.T01:intron 35.0%
TTCTTATGAAGCAACCAATG+TGG + Chr5:3311730-3311749 MsG0580024317.01.T01:CDS 35.0%
TTCTTGTTCCTGCATGAAAT+AGG - Chr5:3314932-3314951 None:intergenic 35.0%
TTGGGACTAATCATGTATAC+AGG + Chr5:3314670-3314689 MsG0580024317.01.T01:intron 35.0%
TTTCTCAATGAGTCGTCTAA+CGG + Chr5:3312250-3312269 MsG0580024317.01.T01:CDS 35.0%
TTTGGACTAATAGGGTTCTT+TGG - Chr5:3312088-3312107 None:intergenic 35.0%
! AACATCCAAGGAGATTTTAC+AGG + Chr5:3315179-3315198 MsG0580024317.01.T01:CDS 35.0%
! AACATGGCTATGAAGTTGAT+GGG - Chr5:3315135-3315154 None:intergenic 35.0%
! AATAGGGTTCTTTGGAAAAG+AGG - Chr5:3312080-3312099 None:intergenic 35.0%
! ACTTTTACAGACAGACACTA+CGG - Chr5:3314349-3314368 None:intergenic 35.0%
! AGTTTCTTGCTATGGTTTCT+GGG + Chr5:3312897-3312916 MsG0580024317.01.T01:CDS 35.0%
! ATAGGGTTCTTTGGAAAAGA+GGG - Chr5:3312079-3312098 None:intergenic 35.0%
! GGTTTATCCTGTACATTTTC+AGG + Chr5:3313542-3313561 MsG0580024317.01.T01:intron 35.0%
!! ATGGTTGCTTTAGAGGAAAA+AGG - Chr5:3314878-3314897 None:intergenic 35.0%
!! CTAGAGAAGCATCAAAACTA+AGG + Chr5:3316059-3316078 MsG0580024317.01.T01:three_prime_UTR 35.0%
!! GAGTAAAGGGTATCAAGAAA+TGG - Chr5:3311638-3311657 None:intergenic 35.0%
!! GCTAGAGGGTTTTGTAAAAA+TGG + Chr5:3312445-3312464 MsG0580024317.01.T01:CDS 35.0%
!! TCTGCAAATGATGCTAGTTT+TGG + Chr5:3312373-3312392 MsG0580024317.01.T01:CDS 35.0%
!! TTGTTGACTCTACAGAAATG+TGG + Chr5:3315519-3315538 MsG0580024317.01.T01:intron 35.0%
!!! AGTTTTGGTGTTGATGAAAG+TGG + Chr5:3312388-3312407 MsG0580024317.01.T01:CDS 35.0%
!!! CTTAGTTTTGATGCTTCTCT+AGG - Chr5:3316061-3316080 None:intergenic 35.0%
!!! TTCTTGTGCTTTTTCACCAA+GGG + Chr5:3312171-3312190 MsG0580024317.01.T01:CDS 35.0%
AAAGACCTGCATGGTTAACA+TGG - Chr5:3315151-3315170 None:intergenic 40.0%
AAATACAAGAGGCAAGCAAG+GGG + Chr5:3315827-3315846 MsG0580024317.01.T01:three_prime_UTR 40.0%
AAATCTTCTCCTAGAGGAAC+TGG + Chr5:3311989-3312008 MsG0580024317.01.T01:CDS 40.0%
AAGGATGTTGCAAAGTCTGA+AGG + Chr5:3315405-3315424 MsG0580024317.01.T01:CDS 40.0%
AAGGGGAGAATCCAAATACA+CGG + Chr5:3313871-3313890 MsG0580024317.01.T01:intron 40.0%
AAGTCCTTGAACTCCAAGAA+AGG + Chr5:3315018-3315037 MsG0580024317.01.T01:CDS 40.0%
AATATGACTCTCACTGTCTC+CGG - Chr5:3314509-3314528 None:intergenic 40.0%
ACATTACCAGAAGGTGATGA+AGG - Chr5:3312046-3312065 None:intergenic 40.0%
AGAATCGTGGACATTTAAGC+AGG - Chr5:3313786-3313805 None:intergenic 40.0%
AGAGGAACTGGACTTAGTAA+TGG + Chr5:3312001-3312020 MsG0580024317.01.T01:CDS 40.0%
AGCAGCACAGTGATAATCAA+AGG + Chr5:3312677-3312696 MsG0580024317.01.T01:CDS 40.0%
ATGTACTTGTCGTACGATAC+CGG - Chr5:3312643-3312662 None:intergenic 40.0%
CACGTGAGTCACATATGAAA+TGG - Chr5:3314547-3314566 None:intergenic 40.0%
CATGATATATGTCTCCCATG+AGG + Chr5:3313514-3313533 MsG0580024317.01.T01:intron 40.0%
CATTACCAGAAGGTGATGAA+GGG - Chr5:3312045-3312064 None:intergenic 40.0%
CCATGTCTTTACTTTGCTAG+AGG + Chr5:3312430-3312449 MsG0580024317.01.T01:CDS 40.0%
CCTCTAGCAAAGTAAAGACA+TGG - Chr5:3312433-3312452 None:intergenic 40.0%
CGAGTAGAATAAAGAAGCCA+AGG - Chr5:3314812-3314831 None:intergenic 40.0%
CGTGAGTCACATATGAAATG+GGG - Chr5:3314545-3314564 None:intergenic 40.0%
CTTTCTCCTGATAACATCCA+AGG + Chr5:3315167-3315186 MsG0580024317.01.T01:CDS 40.0%
GACTTTAGCAAGAACCACAT+TGG - Chr5:3311747-3311766 None:intergenic 40.0%
GCAAGAAACTCATTCCTTTC+GGG - Chr5:3312887-3312906 None:intergenic 40.0%
GGAGGGGGATCATATTAATT+AGG + Chr5:3315848-3315867 MsG0580024317.01.T01:three_prime_UTR 40.0%
GGTAAGGAATTCTCACATCT+TGG - Chr5:3314448-3314467 None:intergenic 40.0%
GTTCCTGCATGAAATAGGTT+TGG - Chr5:3314927-3314946 None:intergenic 40.0%
GTTTGTCACCTTTGTCTTTC+CGG + Chr5:3314487-3314506 MsG0580024317.01.T01:CDS 40.0%
TAAGAGGTGAAGGTGAAGAA+GGG - Chr5:3311925-3311944 None:intergenic 40.0%
TAGCAAGGTTATGAAGAACC+TGG - Chr5:3311865-3311884 None:intergenic 40.0%
TATGTTACATTTCAGAGCCG+TGG + Chr5:3312805-3312824 MsG0580024317.01.T01:intron 40.0%
TCACCAAACCTATTTCATGC+AGG + Chr5:3314921-3314940 MsG0580024317.01.T01:intron 40.0%
TCTTTGAATGTGCTTTCAGC+AGG - Chr5:3312965-3312984 None:intergenic 40.0%
TGAAGAGTTCATGAGGTTCA+AGG + Chr5:3312558-3312577 MsG0580024317.01.T01:CDS 40.0%
TGAATCGACAACATCTGCTT+CGG + Chr5:3315669-3315688 MsG0580024317.01.T01:CDS 40.0%
TGCTGAGAGTGGGAATTTAA+AGG + Chr5:3315386-3315405 MsG0580024317.01.T01:CDS 40.0%
TGTATAGCCACCAAAACCTA+CGG + Chr5:3311578-3311597 MsG0580024317.01.T01:five_prime_UTR 40.0%
TGTGACCAAACATTACCAGA+AGG - Chr5:3312055-3312074 None:intergenic 40.0%
TGTTCCAATCCCTCAAACTT+GGG - Chr5:3312535-3312554 None:intergenic 40.0%
TTAAGAGGTGAAGGTGAAGA+AGG - Chr5:3311926-3311945 None:intergenic 40.0%
TTACTAAGTCCAGTTCCTCT+AGG - Chr5:3312001-3312020 None:intergenic 40.0%
TTGTTCCAATCCCTCAAACT+TGG - Chr5:3312536-3312555 None:intergenic 40.0%
TTTGTGAACCATAGGGTTTG+TGG + Chr5:3314117-3314136 MsG0580024317.01.T01:intron 40.0%
! AACTTTTCCCTTCTCCTTGT+AGG - Chr5:3314582-3314601 None:intergenic 40.0%
! AAGATGTTTCGGAGTACTTC+AGG + Chr5:3312987-3313006 MsG0580024317.01.T01:CDS 40.0%
! ACTTTTCCCTTCTCCTTGTA+GGG - Chr5:3314581-3314600 None:intergenic 40.0%
! CAGGTTAGTCCTGTATACTA+TGG + Chr5:3315198-3315217 MsG0580024317.01.T01:intron 40.0%
! CATCACCTTCTGGTAATGTT+TGG + Chr5:3312047-3312066 MsG0580024317.01.T01:CDS 40.0%
! GAGTTTCTTGCTATGGTTTC+TGG + Chr5:3312896-3312915 MsG0580024317.01.T01:CDS 40.0%
! GTTTCTTGCTATGGTTTCTG+GGG + Chr5:3312898-3312917 MsG0580024317.01.T01:CDS 40.0%
!! ACATGGCTATGAAGTTGATG+GGG - Chr5:3315134-3315153 None:intergenic 40.0%
!! AGTTGATGGGGAAAAACCAA+AGG - Chr5:3315122-3315141 None:intergenic 40.0%
!! ATGCTTCTCTAGGATGATCT+AGG - Chr5:3316051-3316070 None:intergenic 40.0%
!! GATGAAAGTGGATTGGGATT+TGG + Chr5:3312400-3312419 MsG0580024317.01.T01:CDS 40.0%
!! GGTGTTGATGAAAGTGGATT+GGG + Chr5:3312394-3312413 MsG0580024317.01.T01:CDS 40.0%
!! TCTTTAGAGTCAAACGCAGA+GGG - Chr5:3314753-3314772 None:intergenic 40.0%
!! TGGTGTAGTTCTAACCAACA+TGG + Chr5:3315218-3315237 MsG0580024317.01.T01:intron 40.0%
!! TGGTGTTGATGAAAGTGGAT+TGG + Chr5:3312393-3312412 MsG0580024317.01.T01:CDS 40.0%
!! TGTTTGTTGTCGTTACCCTA+CGG + Chr5:3314038-3314057 MsG0580024317.01.T01:intron 40.0%
!! TTCTTTAGAGTCAAACGCAG+AGG - Chr5:3314754-3314773 None:intergenic 40.0%
!!! GAACCTTTTGATTTCCATCC+TGG + Chr5:3314771-3314790 MsG0580024317.01.T01:CDS 40.0%
!!! GTTCTTGTGCTTTTTCACCA+AGG + Chr5:3312170-3312189 MsG0580024317.01.T01:CDS 40.0%
!!! TAATCTCCAGCTGCTTTTGT+TGG - Chr5:3315577-3315596 None:intergenic 40.0%
AAAACCTACGGCTACTGGTA+AGG + Chr5:3311590-3311609 MsG0580024317.01.T01:five_prime_UTR 45.0%
AAAACTGAAGCAGCACGAGA+TGG - Chr5:3314897-3314916 None:intergenic 45.0%
AACGCAGAGGGACTTAAACA+TGG - Chr5:3314741-3314760 None:intergenic 45.0%
AAGAGGTGAAGGTGAAGAAG+GGG - Chr5:3311924-3311943 None:intergenic 45.0%
AAGCAAAGAGACTGTCAGGA+AGG - Chr5:3315552-3315571 None:intergenic 45.0%
AAGGTGAAGAAGGGGTAGAT+AGG - Chr5:3311916-3311935 None:intergenic 45.0%
AGCAAAGAGACTGTCAGGAA+GGG - Chr5:3315551-3315570 None:intergenic 45.0%
AGCAATACTATGACTGCCGT+AGG - Chr5:3314057-3314076 None:intergenic 45.0%
AGGATAAACCTGTCTCCTCA+TGG - Chr5:3313532-3313551 None:intergenic 45.0%
AGGTTATGAAGAACCTGGTC+AGG - Chr5:3311860-3311879 None:intergenic 45.0%
ATCAGCAGCAGCAATTTGAG+AGG + Chr5:3314703-3314722 MsG0580024317.01.T01:CDS 45.0%
CAAATTGCTGCTGCTGATGT+TGG - Chr5:3314701-3314720 None:intergenic 45.0%
CACAGGCAAAACCACTTTCA+TGG - Chr5:3313215-3313234 None:intergenic 45.0%
CATAGCCATGTTAACCATGC+AGG + Chr5:3315143-3315162 MsG0580024317.01.T01:CDS 45.0%
CCAATAGGGTTAAGAGGTGA+AGG - Chr5:3311935-3311954 None:intergenic 45.0%
CCTTCACCTCTTAACCCTAT+TGG + Chr5:3311932-3311951 MsG0580024317.01.T01:CDS 45.0%
CTAAAGAACCAGCAGAAGTG+AGG - Chr5:3315296-3315315 None:intergenic 45.0%
CTCTCTGACGCTTCAAAGAT+AGG + Chr5:3311477-3311496 MsG0580024317.01.T01:five_prime_UTR 45.0%
GAATCGACAACATCTGCTTC+GGG + Chr5:3315670-3315689 MsG0580024317.01.T01:CDS 45.0%
GAATGTGCTTTCAGCAGGAA+AGG - Chr5:3312960-3312979 None:intergenic 45.0%
GCAATACTATGACTGCCGTA+GGG - Chr5:3314056-3314075 None:intergenic 45.0%
GGAATTCTCACATCTTGGAC+AGG - Chr5:3314443-3314462 None:intergenic 45.0%
GGATAAACCTGTCTCCTCAT+GGG - Chr5:3313531-3313550 None:intergenic 45.0%
GGGTCTTTACCCTAATAGCA+AGG - Chr5:3311880-3311899 None:intergenic 45.0%
GTACTCTCATTAGCCACTTC+CGG - Chr5:3315619-3315638 None:intergenic 45.0%
GTAGCAGCATCAATGCAAGA+TGG - Chr5:3315360-3315379 None:intergenic 45.0%
GTGAAACCCTACAAGGAGAA+GGG + Chr5:3314572-3314591 MsG0580024317.01.T01:CDS 45.0%
GTTGATCCGCGTCTTGAAAT+GGG + Chr5:3312283-3312302 MsG0580024317.01.T01:CDS 45.0%
TATCAGGAGAAAGACCTGCA+TGG - Chr5:3315160-3315179 None:intergenic 45.0%
TCAGCAGCAGCAATTTGAGA+GGG + Chr5:3314704-3314723 MsG0580024317.01.T01:CDS 45.0%
TCAGCAGCATCAAAGAATGG+TGG + Chr5:3312585-3312604 MsG0580024317.01.T01:CDS 45.0%
TCCTTGAACTCCAAGAAAGG+AGG + Chr5:3315021-3315040 MsG0580024317.01.T01:CDS 45.0%
TGCTCAGCAGCATCAAAGAA+TGG + Chr5:3312582-3312601 MsG0580024317.01.T01:CDS 45.0%
TGTGAAACCCTACAAGGAGA+AGG + Chr5:3314571-3314590 MsG0580024317.01.T01:CDS 45.0%
TGTGCTTGTGAAACCCTACA+AGG + Chr5:3314565-3314584 MsG0580024317.01.T01:CDS 45.0%
TTCACCCAAGTTTGAGGGAT+TGG + Chr5:3312528-3312547 MsG0580024317.01.T01:CDS 45.0%
TTTAGCATGTTGTCCTGACC+AGG + Chr5:3311844-3311863 MsG0580024317.01.T01:CDS 45.0%
! AACATGCGCTTTTGCTGGTA+AGG - Chr5:3314464-3314483 None:intergenic 45.0%
! AAGTCTGAAGGCGTAGATCT+CGG + Chr5:3315417-3315436 MsG0580024317.01.T01:CDS 45.0%
! ACCAGCAAAAGCGCATGTTT+GGG + Chr5:3314465-3314484 MsG0580024317.01.T01:CDS 45.0%
! GTTGGTTCACCCAAGTTTGA+GGG + Chr5:3312523-3312542 MsG0580024317.01.T01:CDS 45.0%
! TACCAGCAAAAGCGCATGTT+TGG + Chr5:3314464-3314483 MsG0580024317.01.T01:CDS 45.0%
! TTACCAGTAGCCGTAGGTTT+TGG - Chr5:3311591-3311610 None:intergenic 45.0%
!! AATATCCAAGGTGCTGTTGG+TGG + Chr5:3312133-3312152 MsG0580024317.01.T01:CDS 45.0%
!! CTCACTTCTGCTGGTTCTTT+AGG + Chr5:3315294-3315313 MsG0580024317.01.T01:CDS 45.0%
!! GAGAATATCCAAGGTGCTGT+TGG + Chr5:3312130-3312149 MsG0580024317.01.T01:CDS 45.0%
!! TCTCTTTAAAGCGTGGAACC+TGG - Chr5:3313154-3313173 None:intergenic 45.0%
!! TGTTGGTTCACCCAAGTTTG+AGG + Chr5:3312522-3312541 MsG0580024317.01.T01:CDS 45.0%
!! TTCCAAGAAGCATCAGACCA+GGG - Chr5:3313240-3313259 None:intergenic 45.0%
AGGAACCCTTCATCACCTTC+TGG + Chr5:3312037-3312056 MsG0580024317.01.T01:CDS 50.0%
ATCTGCTTCGGGTGACAACA+TGG + Chr5:3315681-3315700 MsG0580024317.01.T01:CDS 50.0%
CACTGTCTCCGGAAAGACAA+AGG - Chr5:3314498-3314517 None:intergenic 50.0%
CACTGTGCACACCATGAAAG+TGG + Chr5:3313201-3313220 MsG0580024317.01.T01:intron 50.0%
CAGCAGCAGCAATTTGAGAG+GGG + Chr5:3314705-3314724 MsG0580024317.01.T01:CDS 50.0%
CATACCTTACCAGTAGCCGT+AGG - Chr5:3311597-3311616 None:intergenic 50.0%
CTTTCCATTGCAGGCTACAG+TGG + Chr5:3315267-3315286 MsG0580024317.01.T01:intron 50.0%
GACTCTTCAGCCTCCTTTCT+TGG - Chr5:3315034-3315053 None:intergenic 50.0%
GAGAAGGAAAATGGAGGAGC+AGG + Chr5:3314980-3314999 MsG0580024317.01.T01:CDS 50.0%
GATGCTTCTTGGAAGCCCTA+GGG + Chr5:3313246-3313265 MsG0580024317.01.T01:intron 50.0%
GCCTCCTTTCTTGGAGTTCA+AGG - Chr5:3315025-3315044 None:intergenic 50.0%
GCTTCACCAACAAAAGCAGC+TGG + Chr5:3315568-3315587 MsG0580024317.01.T01:CDS 50.0%
GGAGTCAGGATCAACATCAG+AGG - Chr5:3313290-3313309 None:intergenic 50.0%
GGTGAAGCAAAGAGACTGTC+AGG - Chr5:3315556-3315575 None:intergenic 50.0%
GGTGGTCAGAATTGGATCTC+TGG + Chr5:3312310-3312329 MsG0580024317.01.T01:CDS 50.0%
GGTGTGCACAGTGAAAATCG+TGG - Chr5:3313194-3313213 None:intergenic 50.0%
GGTTGATCCGCGTCTTGAAA+TGG + Chr5:3312282-3312301 MsG0580024317.01.T01:CDS 50.0%
GTCGTCTAACGGCGATGATT+TGG + Chr5:3312261-3312280 MsG0580024317.01.T01:CDS 50.0%
TATGTCTCCCATGAGGAGAC+AGG + Chr5:3313521-3313540 MsG0580024317.01.T01:intron 50.0%
TCCGGTGGAGAGAAATCAGA+CGG - Chr5:3315601-3315620 None:intergenic 50.0%
TCCGTCTGATTTCTCTCCAC+CGG + Chr5:3315597-3315616 MsG0580024317.01.T01:CDS 50.0%
TGATGCTTCTTGGAAGCCCT+AGG + Chr5:3313245-3313264 MsG0580024317.01.T01:intron 50.0%
TGATTTCTCTCCACCGGAAG+TGG + Chr5:3315603-3315622 MsG0580024317.01.T01:CDS 50.0%
! ACCCAAACATGCGCTTTTGC+TGG - Chr5:3314469-3314488 None:intergenic 50.0%
! GCACGAGATGGTTGCTTTAG+AGG - Chr5:3314885-3314904 None:intergenic 50.0%
! TCTCTCTGTTGGTGCTCCTT+TGG + Chr5:3315103-3315122 MsG0580024317.01.T01:CDS 50.0%
! TTCTGGGGACAAGCCTAACT+CGG + Chr5:3312913-3312932 MsG0580024317.01.T01:CDS 50.0%
!! ACGACTTGCTAATGCTGTGC+AGG + Chr5:3313025-3313044 MsG0580024317.01.T01:intron 50.0%
!! CTTCCAAGAAGCATCAGACC+AGG - Chr5:3313241-3313260 None:intergenic 50.0%
!! GCAAATTCCGGTGCTGTTGT+TGG + Chr5:3312505-3312524 MsG0580024317.01.T01:CDS 50.0%
AAGGCGTAGATCTCGGCATG+GGG + Chr5:3315424-3315443 MsG0580024317.01.T01:CDS 55.0%
ACAAGAGGCAAGCAAGGGGA+GGG + Chr5:3315831-3315850 MsG0580024317.01.T01:three_prime_UTR 55.0%
ACAAGCCTAACTCGGCTTCG+CGG + Chr5:3312921-3312940 MsG0580024317.01.T01:CDS 55.0%
ACATTTCAGAGCCGTGGCTG+CGG + Chr5:3312811-3312830 MsG0580024317.01.T01:intron 55.0%
CCAACGCCCATTTCAAGACG+CGG - Chr5:3312292-3312311 None:intergenic 55.0%
CCACCAAAACCTACGGCTAC+TGG + Chr5:3311585-3311604 MsG0580024317.01.T01:five_prime_UTR 55.0%
CTCCCTGGTCTGATGCTTCT+TGG + Chr5:3313235-3313254 MsG0580024317.01.T01:intron 55.0%
CTCTCATTAGCCACTTCCGG+TGG - Chr5:3315616-3315635 None:intergenic 55.0%
CTTGGAAGCCCTAGGGAAGA+TGG + Chr5:3313253-3313272 MsG0580024317.01.T01:intron 55.0%
GATGTGCACGTGCAGAATCG+TGG - Chr5:3313799-3313818 None:intergenic 55.0%
GGGTGAACCAACAACAGCAC+CGG - Chr5:3312515-3312534 None:intergenic 55.0%
TACAAGAGGCAAGCAAGGGG+AGG + Chr5:3315830-3315849 MsG0580024317.01.T01:three_prime_UTR 55.0%
TAGGGTTTGTGGCCCTCAGA+AGG + Chr5:3314128-3314147 MsG0580024317.01.T01:intron 55.0%
TCAACATTACTGGTCGGGGC+AGG + Chr5:3312861-3312880 MsG0580024317.01.T01:CDS 55.0%
TCTGAGGGCCACAAACCCTA+TGG - Chr5:3314128-3314147 None:intergenic 55.0%
TGCTGCTGGTGGAACATCAC+CGG + Chr5:3312621-3312640 MsG0580024317.01.T01:CDS 55.0%
! GAAGGCGTAGATCTCGGCAT+GGG + Chr5:3315423-3315442 MsG0580024317.01.T01:CDS 55.0%
! TGAAGGCGTAGATCTCGGCA+TGG + Chr5:3315422-3315441 MsG0580024317.01.T01:CDS 55.0%
!! CCAGTAGCCGTAGGTTTTGG+TGG - Chr5:3311588-3311607 None:intergenic 55.0%
!! CGTCTTGAAATGGGCGTTGG+TGG + Chr5:3312292-3312311 MsG0580024317.01.T01:CDS 55.0%
!! GCATCACAACTTGCTGCTGG+TGG + Chr5:3312610-3312629 MsG0580024317.01.T01:CDS 55.0%
!! GCTGCATCACAACTTGCTGC+TGG + Chr5:3312607-3312626 MsG0580024317.01.T01:CDS 55.0%
!! TGGGCGTTGGTGGTCAGAAT+TGG + Chr5:3312302-3312321 MsG0580024317.01.T01:CDS 55.0%
AAGAGGCAAGCAAGGGGAGG+GGG + Chr5:3315833-3315852 MsG0580024317.01.T01:three_prime_UTR 60.0%
AGTGGCAGCCTCACTTCTGC+TGG + Chr5:3315285-3315304 MsG0580024317.01.T01:CDS 60.0%
ATCTGCCGCGAAGCCGAGTT+AGG - Chr5:3312929-3312948 None:intergenic 60.0%
CAACAGAGAGACTGCGCTGG+TGG - Chr5:3315094-3315113 None:intergenic 60.0%
CAAGAGGCAAGCAAGGGGAG+GGG + Chr5:3315832-3315851 MsG0580024317.01.T01:three_prime_UTR 60.0%
CACCAACAGAGAGACTGCGC+TGG - Chr5:3315097-3315116 None:intergenic 60.0%
CACCAGCGCAGTCTCTCTGT+TGG + Chr5:3315092-3315111 MsG0580024317.01.T01:CDS 60.0%
CACTGCCACCAACAGCACCT+TGG - Chr5:3312141-3312160 None:intergenic 60.0%
CCGCGTCTTGAAATGGGCGT+TGG + Chr5:3312289-3312308 MsG0580024317.01.T01:CDS 60.0%
GCTGCCACTGTAGCCTGCAA+TGG - Chr5:3315274-3315293 None:intergenic 60.0%
GCTGCGGCAGCATTTGCGAT+GGG + Chr5:3312827-3312846 MsG0580024317.01.T01:CDS 60.0%
! AGCATCAGACCAGGGAGCAC+AGG - Chr5:3313232-3313251 None:intergenic 60.0%
! AGGTGCTGCATCTGAGCAGC+AGG + Chr5:3315314-3315333 MsG0580024317.01.T01:CDS 60.0%
!! CAAGGTGCTGTTGGTGGCAG+TGG + Chr5:3312139-3312158 MsG0580024317.01.T01:CDS 60.0%
!! CTGCGCTGGTGGTGGTGAAT+CGG - Chr5:3315083-3315102 None:intergenic 60.0%
!! GTGGTTTTGCCTGTGCTCCC+TGG + Chr5:3313220-3313239 MsG0580024317.01.T01:intron 60.0%
CGCAAATGCTGCCGCAGCCA+CGG - Chr5:3312825-3312844 None:intergenic 65.0%
GGCTGCGGCAGCATTTGCGA+TGG + Chr5:3312826-3312845 MsG0580024317.01.T01:CDS 65.0%
! CAGAGAGACTGCGCTGGTGG+TGG - Chr5:3315091-3315110 None:intergenic 65.0%
!! GCTGTTGGTGGCAGTGGTGC+TGG + Chr5:3312145-3312164 MsG0580024317.01.T01:CDS 65.0%
!! GTTGGTGGCAGTGGTGCTGG+TGG + Chr5:3312148-3312167 MsG0580024317.01.T01:CDS 65.0%
CTGGTCGGGGCAGGCCCGAA+AGG + Chr5:3312870-3312889 MsG0580024317.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 3311381 3316311 3311381 ID=MsG0580024317.01;Name=MsG0580024317.01
Chr5 mRNA 3311381 3316311 3311381 ID=MsG0580024317.01.T01;Parent=MsG0580024317.01;Name=MsG0580024317.01.T01;_AED=0.22;_eAED=0.22;_QI=344|1|1|1|0.75|0.66|9|397|682
Chr5 exon 3311381 3312698 3311381 ID=MsG0580024317.01.T01:exon:1035;Parent=MsG0580024317.01.T01
Chr5 exon 3312820 3313008 3312820 ID=MsG0580024317.01.T01:exon:1036;Parent=MsG0580024317.01.T01
Chr5 exon 3314430 3314609 3314430 ID=MsG0580024317.01.T01:exon:1037;Parent=MsG0580024317.01.T01
Chr5 exon 3314692 3314792 3314692 ID=MsG0580024317.01.T01:exon:1038;Parent=MsG0580024317.01.T01
Chr5 exon 3314943 3315200 3314943 ID=MsG0580024317.01.T01:exon:1039;Parent=MsG0580024317.01.T01
Chr5 exon 3315280 3315445 3315280 ID=MsG0580024317.01.T01:exon:1040;Parent=MsG0580024317.01.T01
Chr5 exon 3315534 3315731 3315534 ID=MsG0580024317.01.T01:exon:1041;Parent=MsG0580024317.01.T01
Chr5 exon 3315820 3315870 3315820 ID=MsG0580024317.01.T01:exon:1042;Parent=MsG0580024317.01.T01
Chr5 exon 3315983 3316311 3315983 ID=MsG0580024317.01.T01:exon:1043;Parent=MsG0580024317.01.T01
Chr5 five_prime_UTR 3311381 3311724 3311381 ID=MsG0580024317.01.T01:five_prime_utr;Parent=MsG0580024317.01.T01
Chr5 CDS 3311725 3312698 3311725 ID=MsG0580024317.01.T01:cds;Parent=MsG0580024317.01.T01
Chr5 CDS 3312820 3313008 3312820 ID=MsG0580024317.01.T01:cds;Parent=MsG0580024317.01.T01
Chr5 CDS 3314430 3314609 3314430 ID=MsG0580024317.01.T01:cds;Parent=MsG0580024317.01.T01
Chr5 CDS 3314692 3314792 3314692 ID=MsG0580024317.01.T01:cds;Parent=MsG0580024317.01.T01
Chr5 CDS 3314943 3315200 3314943 ID=MsG0580024317.01.T01:cds;Parent=MsG0580024317.01.T01
Chr5 CDS 3315280 3315445 3315280 ID=MsG0580024317.01.T01:cds;Parent=MsG0580024317.01.T01
Chr5 CDS 3315534 3315714 3315534 ID=MsG0580024317.01.T01:cds;Parent=MsG0580024317.01.T01
Chr5 three_prime_UTR 3315715 3315731 3315715 ID=MsG0580024317.01.T01:three_prime_utr;Parent=MsG0580024317.01.T01
Chr5 three_prime_UTR 3315820 3315870 3315820 ID=MsG0580024317.01.T01:three_prime_utr;Parent=MsG0580024317.01.T01
Chr5 three_prime_UTR 3315983 3316311 3315983 ID=MsG0580024317.01.T01:three_prime_utr;Parent=MsG0580024317.01.T01
Gene Sequence

>MsG0580024317.01.T01

ATGGGTTCTTATGAAGCAACCAATGTGGTTCTTGCTAAAGTCAAAAACTTTGACCCTGAAAATGCTTCAAAAATCATGGGTTTTCTTCTCATGAACCTTGAAGAATATGAACTTGTTCGTTTAGCATGTTGTCCTGACCAGGTTCTTCATAACCTTGCTATTAGGGTAAAGACCCATTTGGGTATGAACCTATCTACCCCTTCTTCACCTTCACCTCTTAACCCTATTGGAAGAATCACTTCATCTTCCAATAACCCTTTTTCAAAATCTTCTCCTAGAGGAACTGGACTTAGTAATGGTTTTGACTTCAATAGGAACCCTTCATCACCTTCTGGTAATGTTTGGTCACAACCCTCTTTTCCAAAGAACCCTATTAGTCCAAAGTTTAATCCTTTAATGTCTTATGAGAATATCCAAGGTGCTGTTGGTGGCAGTGGTGCTGGTGGTTCTTGTGCTTTTTCACCAAGGGTTAATAATGGTGATTATGATTTTGTTGATGAACAACAGCTGAATGAGTGTTTTCCTTTTCTCAATGAGTCGTCTAACGGCGATGATTTGGTTGATCCGCGTCTTGAAATGGGCGTTGGTGGTCAGAATTGGATCTCTGGTAACAATGGCGATGCTCATAATATTCATAAGAGGAGTTTTTCTGCAAATGATGCTAGTTTTGGTGTTGATGAAAGTGGATTGGGATTTGGTTTTAAGCCATGTCTTTACTTTGCTAGAGGGTTTTGTAAAAATGGTTCCAATTGTAAGTTTGTTCATGGTGATTCGATTGATGCAAATTCCGGTGCTGTTGTTGGTTCACCCAAGTTTGAGGGATTGGAACAACATGAAGAGTTCATGAGGTTCAAGGCTGCTCAGCAGCATCAAAGAATGGTGGCTGCATCACAACTTGCTGCTGGTGGAACATCACCGGTATCGTACGACAAGTACATTGATCTTCTGATGCAGCAGCACAGTGATAATCAAAGAGCCGTGGCTGCGGCAGCATTTGCGATGGGTGAAGAATATTTCAACATTACTGGTCGGGGCAGGCCCGAAAGGAATGAGTTTCTTGCTATGGTTTCTGGGGACAAGCCTAACTCGGCTTCGCGGCAGATTTACTTGACCTTTCCTGCTGAAAGCACATTCAAAGATGAAGATGTTTCGGAGTACTTCAGCAAATTTGGACCTGTCCAAGATGTGAGAATTCCTTACCAGCAAAAGCGCATGTTTGGGTTTGTCACCTTTGTCTTTCCGGAGACAGTGAGAGTCATATTATCGAAAGGAAATCCCCATTTCATATGTGACTCACGTGTGCTTGTGAAACCCTACAAGGAGAAGGGAAAAGTTCCTGACAAGAGACACCAACATCAGCAGCAGCAATTTGAGAGGGGAGATTTTTCGCCATGTTTAAGTCCCTCTGCGTTTGACTCTAAAGAACCTTTTGATTTCCATCCTGGAACAAGAATGCTATACAATCCACATGATATCTTATTGAGAAGGAAAATGGAGGAGCAGGCTGCTGACTTTCAGCAAGTCCTTGAACTCCAAGAAAGGAGGCTGAAGAGTCTGCAGCTTCCAGATTTCAAGAATAATCCGATTCACCACCACCAGCGCAGTCTCTCTGTTGGTGCTCCTTTGGTTTTTCCCCATCAACTTCATAGCCATGTTAACCATGCAGGTCTTTCTCCTGATAACATCCAAGGAGATTTTACAGGCTACAGTGGCAGCCTCACTTCTGCTGGTTCTTTAGGTGCTGCATCTGAGCAGCAGGCGCTACACAAAGAAGCTGATCCATCTTGCATTGATGCTGCTACTGCTGCTGCTGAGAGTGGGAATTTAAAGGATGTTGCAAAGTCTGAAGGCGTAGATCTCGGCATGGGAAATGTGGAGCACACCCTTCCTGACAGTCTCTTTGCTTCACCAACAAAAGCAGCTGGAGATTATCCGTCTGATTTCTCTCCACCGGAAGTGGCTAATGAGAGTACTGCATTTTCGACTAGCTTGTCTCAGAAGTTTGAATCGACAACATCTGCTTCGGGTGACAACATGGCTTCCGTTTAA
Protein sequence

>MsG0580024317.01.T01

MGSYEATNVVLAKVKNFDPENASKIMGFLLMNLEEYELVRLACCPDQVLHNLAIRVKTHLGMNLSTPSSPSPLNPIGRITSSSNNPFSKSSPRGTGLSNGFDFNRNPSSPSGNVWSQPSFPKNPISPKFNPLMSYENIQGAVGGSGAGGSCAFSPRVNNGDYDFVDEQQLNECFPFLNESSNGDDLVDPRLEMGVGGQNWISGNNGDAHNIHKRSFSANDASFGVDESGLGFGFKPCLYFARGFCKNGSNCKFVHGDSIDANSGAVVGSPKFEGLEQHEEFMRFKAAQQHQRMVAASQLAAGGTSPVSYDKYIDLLMQQHSDNQRAVAAAAFAMGEEYFNITGRGRPERNEFLAMVSGDKPNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKVPDKRHQHQQQQFERGDFSPCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKMEEQAADFQQVLELQERRLKSLQLPDFKNNPIHHHQRSLSVGAPLVFPHQLHSHVNHAGLSPDNIQGDFTGYSGSLTSAGSLGAASEQQALHKEADPSCIDAATAAAESGNLKDVAKSEGVDLGMGNVEHTLPDSLFASPTKAAGDYPSDFSPPEVANESTAFSTSLSQKFESTTSASGDNMASV*