AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001759.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001759.01.T01 MTR_1g042280 100.000 326 0 0 1 326 1 326 0.0 682
MsG0180001759.01.T01 MTR_1g075870 92.049 327 26 0 1 327 1 327 0.0 636
MsG0180001759.01.T01 MTR_1g075870 92.025 326 26 0 1 326 1 326 0.0 630
MsG0180001759.01.T01 MTR_1g042280 99.659 293 1 0 41 333 9 301 0.0 608
MsG0180001759.01.T01 MTR_7g097160 89.297 327 33 2 2 326 1 327 0.0 603
MsG0180001759.01.T01 MTR_1g069720 89.508 305 32 0 2 306 1 305 0.0 581
MsG0180001759.01.T01 MTR_0492s0030 81.651 327 58 1 2 326 1 327 0.0 550
MsG0180001759.01.T01 MTR_0543s0020 81.651 327 58 1 2 326 1 327 0.0 550
MsG0180001759.01.T01 MTR_2g099670 77.477 333 65 3 2 327 1 330 0.0 544
MsG0180001759.01.T01 MTR_1g075870 91.727 278 23 0 58 335 1 278 0.0 540
MsG0180001759.01.T01 MTR_4g126010 82.828 297 51 0 2 298 1 297 0.0 539
MsG0180001759.01.T01 MTR_8g018310 79.180 317 63 2 2 318 1 314 0.0 537
MsG0180001759.01.T01 MTR_8g018310 79.180 317 63 2 2 318 1 314 0.0 532
MsG0180001759.01.T01 MTR_6g087070 75.625 320 75 2 2 321 1 317 0.0 514
MsG0180001759.01.T01 MTR_8g102930 74.132 317 79 2 2 318 1 314 1.17e-178 502
MsG0180001759.01.T01 MTR_2g039930 73.186 317 83 1 2 318 1 315 1.89e-178 503
MsG0180001759.01.T01 MTR_1g004990 66.667 327 104 1 2 323 1 327 2.81e-164 465
MsG0180001759.01.T01 MTR_3g110180 71.186 295 85 0 2 296 1 295 1.03e-163 464
MsG0180001759.01.T01 MTR_3g110180 71.186 295 84 1 2 296 1 294 2.80e-162 461
MsG0180001759.01.T01 MTR_2g099670 76.471 272 54 3 63 327 10 278 5.66e-155 442
MsG0180001759.01.T01 MTR_2g039930 74.576 236 58 1 83 318 1 234 3.66e-133 385
MsG0180001759.01.T01 MTR_7g097160 87.500 184 21 2 145 326 25 208 4.51e-113 332
MsG0180001759.01.T01 MTR_7g006030 39.100 289 157 6 6 278 31 316 1.05e-60 205
MsG0180001759.01.T01 MTR_1g116210 38.028 284 162 6 6 278 113 393 2.94e-57 197
MsG0180001759.01.T01 MTR_3g110240 38.434 281 160 6 4 274 113 390 4.06e-57 197
MsG0180001759.01.T01 MTR_1g007150 37.276 279 162 6 6 274 118 393 1.04e-55 193
MsG0180001759.01.T01 MTR_7g085540 37.234 282 161 5 10 278 147 425 4.48e-55 191
MsG0180001759.01.T01 MTR_8g014050 37.234 282 155 6 10 274 128 404 2.17e-51 181
MsG0180001759.01.T01 MTR_7g116400 64.179 67 23 1 81 146 1 67 3.31e-22 89.7
MsG0180001759.01.T01 MTR_4g132860 27.305 282 175 10 12 282 82 344 1.15e-13 71.6
MsG0180001759.01.T01 MTR_5g007590 47.297 74 31 1 73 146 54 119 1.60e-13 67.4
MsG0180001759.01.T01 MTR_3g466480 31.050 219 129 8 6 215 17 222 1.93e-13 71.2
MsG0180001759.01.T01 MTR_5g022030 25.000 224 151 6 9 224 98 312 4.23e-12 67.4
MsG0180001759.01.T01 MTR_5g022030 25.000 224 151 6 9 224 98 312 6.53e-12 67.0
MsG0180001759.01.T01 MTR_4g128820 28.704 216 130 7 8 214 8 208 1.12e-11 65.9
MsG0180001759.01.T01 MTR_7g073520 34.426 122 67 4 110 229 252 362 2.02e-11 65.5
MsG0180001759.01.T01 MTR_7g106710 27.189 217 134 8 10 216 135 337 2.09e-11 65.1
MsG0180001759.01.T01 MTR_7g106710 27.189 217 134 8 10 216 135 337 3.23e-11 64.7
MsG0180001759.01.T01 MTR_7g106710 27.189 217 134 8 10 216 135 337 3.41e-11 64.7
MsG0180001759.01.T01 MTR_4g006970 28.700 223 133 10 5 216 15 222 5.21e-11 63.9
MsG0180001759.01.T01 MTR_7g106710 27.189 217 134 8 10 216 135 337 6.00e-11 63.9
MsG0180001759.01.T01 MTR_8g095440 26.009 223 146 8 10 224 30 241 6.04e-11 63.5
MsG0180001759.01.T02 MTR_1g042280 100.000 326 0 0 1 326 1 326 0.0 682
MsG0180001759.01.T02 MTR_1g075870 92.049 327 26 0 1 327 1 327 0.0 636
MsG0180001759.01.T02 MTR_1g075870 92.025 326 26 0 1 326 1 326 0.0 630
MsG0180001759.01.T02 MTR_1g042280 99.659 293 1 0 41 333 9 301 0.0 608
MsG0180001759.01.T02 MTR_7g097160 89.297 327 33 2 2 326 1 327 0.0 603
MsG0180001759.01.T02 MTR_1g069720 89.508 305 32 0 2 306 1 305 0.0 581
MsG0180001759.01.T02 MTR_0492s0030 81.651 327 58 1 2 326 1 327 0.0 550
MsG0180001759.01.T02 MTR_0543s0020 81.651 327 58 1 2 326 1 327 0.0 550
MsG0180001759.01.T02 MTR_2g099670 77.477 333 65 3 2 327 1 330 0.0 544
MsG0180001759.01.T02 MTR_1g075870 91.727 278 23 0 58 335 1 278 0.0 540
MsG0180001759.01.T02 MTR_4g126010 82.828 297 51 0 2 298 1 297 0.0 539
MsG0180001759.01.T02 MTR_8g018310 79.180 317 63 2 2 318 1 314 0.0 537
MsG0180001759.01.T02 MTR_8g018310 79.180 317 63 2 2 318 1 314 0.0 532
MsG0180001759.01.T02 MTR_6g087070 75.625 320 75 2 2 321 1 317 0.0 514
MsG0180001759.01.T02 MTR_8g102930 74.132 317 79 2 2 318 1 314 1.17e-178 502
MsG0180001759.01.T02 MTR_2g039930 73.186 317 83 1 2 318 1 315 1.89e-178 503
MsG0180001759.01.T02 MTR_1g004990 66.667 327 104 1 2 323 1 327 2.81e-164 465
MsG0180001759.01.T02 MTR_3g110180 71.186 295 85 0 2 296 1 295 1.03e-163 464
MsG0180001759.01.T02 MTR_3g110180 71.186 295 84 1 2 296 1 294 2.80e-162 461
MsG0180001759.01.T02 MTR_2g099670 76.471 272 54 3 63 327 10 278 5.66e-155 442
MsG0180001759.01.T02 MTR_2g039930 74.576 236 58 1 83 318 1 234 3.66e-133 385
MsG0180001759.01.T02 MTR_7g097160 87.500 184 21 2 145 326 25 208 4.51e-113 332
MsG0180001759.01.T02 MTR_7g006030 39.100 289 157 6 6 278 31 316 1.05e-60 205
MsG0180001759.01.T02 MTR_1g116210 38.028 284 162 6 6 278 113 393 2.94e-57 197
MsG0180001759.01.T02 MTR_3g110240 38.434 281 160 6 4 274 113 390 4.06e-57 197
MsG0180001759.01.T02 MTR_1g007150 37.276 279 162 6 6 274 118 393 1.04e-55 193
MsG0180001759.01.T02 MTR_7g085540 37.234 282 161 5 10 278 147 425 4.48e-55 191
MsG0180001759.01.T02 MTR_8g014050 37.234 282 155 6 10 274 128 404 2.17e-51 181
MsG0180001759.01.T02 MTR_7g116400 64.179 67 23 1 81 146 1 67 3.31e-22 89.7
MsG0180001759.01.T02 MTR_4g132860 27.305 282 175 10 12 282 82 344 1.15e-13 71.6
MsG0180001759.01.T02 MTR_5g007590 47.297 74 31 1 73 146 54 119 1.60e-13 67.4
MsG0180001759.01.T02 MTR_3g466480 31.050 219 129 8 6 215 17 222 1.93e-13 71.2
MsG0180001759.01.T02 MTR_5g022030 25.000 224 151 6 9 224 98 312 4.23e-12 67.4
MsG0180001759.01.T02 MTR_5g022030 25.000 224 151 6 9 224 98 312 6.53e-12 67.0
MsG0180001759.01.T02 MTR_4g128820 28.704 216 130 7 8 214 8 208 1.12e-11 65.9
MsG0180001759.01.T02 MTR_7g073520 34.426 122 67 4 110 229 252 362 2.02e-11 65.5
MsG0180001759.01.T02 MTR_7g106710 27.189 217 134 8 10 216 135 337 2.09e-11 65.1
MsG0180001759.01.T02 MTR_7g106710 27.189 217 134 8 10 216 135 337 3.23e-11 64.7
MsG0180001759.01.T02 MTR_7g106710 27.189 217 134 8 10 216 135 337 3.41e-11 64.7
MsG0180001759.01.T02 MTR_4g006970 28.700 223 133 10 5 216 15 222 5.21e-11 63.9
MsG0180001759.01.T02 MTR_7g106710 27.189 217 134 8 10 216 135 337 6.00e-11 63.9
MsG0180001759.01.T02 MTR_8g095440 26.009 223 146 8 10 224 30 241 6.04e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001759.01.T01 AT3G23340 89.846 325 32 1 2 325 1 325 0.0 617
MsG0180001759.01.T01 AT4G14340 86.196 326 44 1 2 326 7 332 0.0 600
MsG0180001759.01.T01 AT4G14340 84.985 333 49 1 2 333 7 339 0.0 600
MsG0180001759.01.T01 AT1G03930 84.036 332 47 1 2 327 1 332 0.0 583
MsG0180001759.01.T01 AT3G23340 86.154 325 30 2 2 325 1 311 0.0 582
MsG0180001759.01.T01 AT1G04440 83.587 329 49 2 2 325 1 329 0.0 582
MsG0180001759.01.T01 AT5G43320 83.988 331 48 2 2 327 1 331 0.0 575
MsG0180001759.01.T01 AT5G44100 85.106 329 42 2 2 324 1 328 0.0 574
MsG0180001759.01.T01 AT5G44100 85.106 329 42 2 2 324 1 328 0.0 574
MsG0180001759.01.T01 AT4G28540 81.928 332 51 2 2 326 5 334 0.0 570
MsG0180001759.01.T01 AT5G43320 79.603 353 58 3 2 346 1 347 0.0 568
MsG0180001759.01.T01 AT5G43320 79.603 353 58 3 2 346 1 347 0.0 568
MsG0180001759.01.T01 AT1G72710 75.758 330 75 2 2 327 1 329 0.0 533
MsG0180001759.01.T01 AT4G26100 75.841 327 74 3 2 328 1 322 0.0 531
MsG0180001759.01.T01 AT5G57015 77.143 315 69 1 2 316 1 312 0.0 526
MsG0180001759.01.T01 AT2G19470 74.224 322 69 1 2 309 1 322 0.0 518
MsG0180001759.01.T01 AT4G28860 72.188 320 84 2 2 321 1 315 1.52e-175 492
MsG0180001759.01.T01 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T01 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T01 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T01 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T01 AT4G28860 72.188 320 84 2 2 321 1 315 6.56e-175 492
MsG0180001759.01.T01 AT4G08800 66.107 298 69 2 2 299 1 266 1.76e-146 415
MsG0180001759.01.T01 AT2G25760 40.357 280 152 4 10 274 107 386 4.13e-62 210
MsG0180001759.01.T01 AT2G25760 39.643 280 151 5 10 274 107 383 6.04e-59 201
MsG0180001759.01.T01 AT3G13670 35.640 289 167 6 6 278 131 416 1.88e-54 190
MsG0180001759.01.T01 AT5G18190 36.170 282 164 5 10 278 130 408 9.58e-54 188
MsG0180001759.01.T01 AT5G18190 36.170 282 164 5 10 278 130 408 9.58e-54 188
MsG0180001759.01.T01 AT3G03940 36.170 282 164 5 10 278 140 418 1.27e-53 187
MsG0180001759.01.T01 AT1G62400 26.761 284 174 11 12 282 88 350 2.63e-12 67.8
MsG0180001759.01.T01 AT3G50530 28.194 227 138 8 7 220 145 359 3.32e-12 68.2
MsG0180001759.01.T01 AT1G30270 27.064 218 136 7 8 215 29 233 4.92e-11 64.3
MsG0180001759.01.T01 AT1G30270 27.064 218 136 7 8 215 29 233 7.27e-11 63.5
MsG0180001759.01.T02 AT3G23340 89.846 325 32 1 2 325 1 325 0.0 617
MsG0180001759.01.T02 AT4G14340 86.196 326 44 1 2 326 7 332 0.0 600
MsG0180001759.01.T02 AT4G14340 84.985 333 49 1 2 333 7 339 0.0 600
MsG0180001759.01.T02 AT1G03930 84.036 332 47 1 2 327 1 332 0.0 583
MsG0180001759.01.T02 AT3G23340 86.154 325 30 2 2 325 1 311 0.0 582
MsG0180001759.01.T02 AT1G04440 83.587 329 49 2 2 325 1 329 0.0 582
MsG0180001759.01.T02 AT5G43320 83.988 331 48 2 2 327 1 331 0.0 575
MsG0180001759.01.T02 AT5G44100 85.106 329 42 2 2 324 1 328 0.0 574
MsG0180001759.01.T02 AT5G44100 85.106 329 42 2 2 324 1 328 0.0 574
MsG0180001759.01.T02 AT4G28540 81.928 332 51 2 2 326 5 334 0.0 570
MsG0180001759.01.T02 AT5G43320 79.603 353 58 3 2 346 1 347 0.0 568
MsG0180001759.01.T02 AT5G43320 79.603 353 58 3 2 346 1 347 0.0 568
MsG0180001759.01.T02 AT1G72710 75.758 330 75 2 2 327 1 329 0.0 533
MsG0180001759.01.T02 AT4G26100 75.841 327 74 3 2 328 1 322 0.0 531
MsG0180001759.01.T02 AT5G57015 77.143 315 69 1 2 316 1 312 0.0 526
MsG0180001759.01.T02 AT2G19470 74.224 322 69 1 2 309 1 322 0.0 518
MsG0180001759.01.T02 AT4G28860 72.188 320 84 2 2 321 1 315 1.52e-175 492
MsG0180001759.01.T02 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T02 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T02 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T02 AT4G28880 72.930 314 85 0 2 315 1 314 2.11e-175 493
MsG0180001759.01.T02 AT4G28860 72.188 320 84 2 2 321 1 315 6.56e-175 492
MsG0180001759.01.T02 AT4G08800 66.107 298 69 2 2 299 1 266 1.76e-146 415
MsG0180001759.01.T02 AT2G25760 40.357 280 152 4 10 274 107 386 4.13e-62 210
MsG0180001759.01.T02 AT2G25760 39.643 280 151 5 10 274 107 383 6.04e-59 201
MsG0180001759.01.T02 AT3G13670 35.640 289 167 6 6 278 131 416 1.88e-54 190
MsG0180001759.01.T02 AT5G18190 36.170 282 164 5 10 278 130 408 9.58e-54 188
MsG0180001759.01.T02 AT5G18190 36.170 282 164 5 10 278 130 408 9.58e-54 188
MsG0180001759.01.T02 AT3G03940 36.170 282 164 5 10 278 140 418 1.27e-53 187
MsG0180001759.01.T02 AT1G62400 26.761 284 174 11 12 282 88 350 2.63e-12 67.8
MsG0180001759.01.T02 AT3G50530 28.194 227 138 8 7 220 145 359 3.32e-12 68.2
MsG0180001759.01.T02 AT1G30270 27.064 218 136 7 8 215 29 233 4.92e-11 64.3
MsG0180001759.01.T02 AT1G30270 27.064 218 136 7 8 215 29 233 7.27e-11 63.5

Find 28 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAGTAAAATTCTGAATTT+TGG 0.082557 1:+26472837 MsG0180001759.01.T01:five_prime_UTR
CTGGAGTAGAACAAAGTAAA+AGG 0.196975 1:+26472700 MsG0180001759.01.T01:five_prime_UTR
TTCAAACTTGGGAGGAAAAT+TGG 0.201290 1:+26472911 MsG0180001759.01.T01:CDS
GTCATTTGGAGAAATTTATT+TGG 0.224733 1:+26472940 MsG0180001759.01.T01:CDS
CTACAAAATCTCTACAATTT+CGG 0.245113 1:+26472545 MsG0180001759.01.T01:five_prime_UTR
CAGAGAGAAGAGTGAGGATT+TGG 0.297213 1:-26472603 None:intergenic
TTTGTAGGAAAGAAGGAAAA+TGG 0.298975 1:-26472529 None:intergenic
GTTATGATGGATCTTGTTAT+TGG 0.304007 1:+26472881 MsG0180001759.01.T01:exon
AATCGAAGTAAGAACGAATC+TGG 0.333823 1:-26472739 None:intergenic
TCATTTGGAGAAATTTATTT+GGG 0.336755 1:+26472941 MsG0180001759.01.T01:CDS
AAAATTGGAAGTGGGTCATT+TGG 0.351862 1:+26472926 MsG0180001759.01.T01:CDS
ATTGGTGGAAAATTCAAACT+TGG 0.459721 1:+26472899 MsG0180001759.01.T01:CDS
TGGAGTAGAACAAAGTAAAA+GGG 0.480649 1:+26472701 MsG0180001759.01.T01:five_prime_UTR
TACTTCGATTCAACTAGTGA+TGG 0.500913 1:+26472752 MsG0180001759.01.T01:five_prime_UTR
AGAAGGAAAATGGATGAGAA+TGG 0.508280 1:-26472519 None:intergenic
TTGGTGGAAAATTCAAACTT+GGG 0.528933 1:+26472900 MsG0180001759.01.T01:CDS
ATGATGGATCTTGTTATTGG+TGG 0.549805 1:+26472884 MsG0180001759.01.T01:CDS
ACTTCGATTCAACTAGTGAT+GGG 0.554162 1:+26472753 MsG0180001759.01.T01:five_prime_UTR
CTTGGGAGGAAAATTGGAAG+TGG 0.565797 1:+26472917 MsG0180001759.01.T01:CDS
ATCGAAGTAAGAACGAATCT+GGG 0.569725 1:-26472738 None:intergenic
GGATCTGTGCGTGGAGGTGA+AGG 0.579945 1:-26472582 None:intergenic
GTGGAAAATTCAAACTTGGG+AGG 0.601354 1:+26472903 MsG0180001759.01.T01:CDS
AATGGAAGTGTGAATGATTG+TGG 0.614836 1:-26472501 None:intergenic
TTGGGAGGAAAATTGGAAGT+GGG 0.646604 1:+26472918 MsG0180001759.01.T01:CDS
TTGACGCAGAGAGAAGAGTG+AGG 0.681665 1:-26472609 None:intergenic
GGAAGTGTGAATGATTGTGG+TGG 0.685924 1:-26472498 None:intergenic
TGAGGATTTGGATCTGTGCG+TGG 0.687525 1:-26472591 None:intergenic
GGATTTGGATCTGTGCGTGG+AGG 0.708930 1:-26472588 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGTTATATTTGAATAATT+TGG + Chr1:26473011-26473030 MsG0180001759.01.T01:intron 10.0%
!!! AATCCAATTTTTATAAAAAT+AGG - Chr1:26472805-26472824 None:intergenic 10.0%
!! AAGTTCTCATTTAAATAAAT+TGG + Chr1:26476101-26476120 MsG0180001759.01.T01:intron 15.0%
!! AGTTCTCATTTAAATAAATT+GGG + Chr1:26476102-26476121 MsG0180001759.01.T01:intron 15.0%
!! ATAAATTACATATAACTAGT+AGG - Chr1:26473672-26473691 None:intergenic 15.0%
!! ATGAATAATAATATTCTACT+TGG + Chr1:26476409-26476428 MsG0180001759.01.T01:intron 15.0%
!! ATTCATATATAAATTCTGTT+CGG - Chr1:26473924-26473943 None:intergenic 15.0%
!! GTAATTTATGTACTTATTTA+TGG + Chr1:26473683-26473702 MsG0180001759.01.T01:intron 15.0%
!! TAAAAATCATGTAAACTTAA+AGG - Chr1:26475645-26475664 None:intergenic 15.0%
!! TATAAAAATAGGATGAAAAA+TGG - Chr1:26472794-26472813 None:intergenic 15.0%
!!! CATCCTATTTTTATAAAAAT+TGG + Chr1:26472799-26472818 MsG0180001759.01.T01:five_prime_UTR 15.0%
!!! TTTATTTCAAGTAAAGAATA+TGG - Chr1:26476591-26476610 None:intergenic 15.0%
!! AAAAATAATAAAGGCCTATT+TGG - Chr1:26475373-26475392 None:intergenic 20.0%
!! AAATTGAACTGGTATAAATT+AGG - Chr1:26474490-26474509 None:intergenic 20.0%
!! AATCTTGATAGAAATAGAAT+AGG + Chr1:26474026-26474045 MsG0180001759.01.T01:intron 20.0%
!! ATATTGAAATATCCACAAAT+TGG + Chr1:26476956-26476975 MsG0180001759.01.T01:CDS 20.0%
!! ATCTTGATAGAAATAGAATA+GGG + Chr1:26474027-26474046 MsG0180001759.01.T01:intron 20.0%
!! TCATTTGGAGAAATTTATTT+GGG + Chr1:26472941-26472960 MsG0180001759.01.T01:CDS 20.0%
!! TCTCTTAAGATATGAATAAT+CGG - Chr1:26476784-26476803 None:intergenic 20.0%
!! TTATTGAATAAATAGGGAAA+TGG - Chr1:26474147-26474166 None:intergenic 20.0%
!! TTTGAATAATTTGGAAACTT+TGG + Chr1:26473020-26473039 MsG0180001759.01.T01:intron 20.0%
!!! AAATAGGCCTTTATTATTTT+TGG + Chr1:26475372-26475391 MsG0180001759.01.T01:intron 20.0%
!!! AAGATTTGTTTACTTCTATT+AGG + Chr1:26473879-26473898 MsG0180001759.01.T01:intron 20.0%
!!! ACTTTAAAATATGCAAGTTT+TGG + Chr1:26474267-26474286 MsG0180001759.01.T01:intron 20.0%
!!! AGTAGTAAAATTCTGAATTT+TGG + Chr1:26472837-26472856 MsG0180001759.01.T01:five_prime_UTR 20.0%
!!! CTAGTTGTTATTTTTGTTAA+CGG + Chr1:26473292-26473311 MsG0180001759.01.T01:intron 20.0%
!!! GATTTTCTTGTAATTATTAC+AGG + Chr1:26475459-26475478 MsG0180001759.01.T01:intron 20.0%
!!! GTAGTAAAATTCTGAATTTT+GGG + Chr1:26472838-26472857 MsG0180001759.01.T01:five_prime_UTR 20.0%
!!! TAGTAAAATTCTGAATTTTG+GGG + Chr1:26472839-26472858 MsG0180001759.01.T01:five_prime_UTR 20.0%
!!! TAGTTGTTATTTTTGTTAAC+GGG + Chr1:26473293-26473312 MsG0180001759.01.T01:intron 20.0%
!!! TAGTTTAGTTGACTTTTAAA+TGG + Chr1:26473263-26473282 MsG0180001759.01.T01:intron 20.0%
!!! TGTTAATTTATATTTGAAGC+TGG + Chr1:26474769-26474788 MsG0180001759.01.T01:intron 20.0%
!!! TTCTGCATTTATTGTTATTT+AGG + Chr1:26475147-26475166 MsG0180001759.01.T01:intron 20.0%
!!! TTTTGTATAAATTCGTTTTC+TGG + Chr1:26472681-26472700 MsG0180001759.01.T01:five_prime_UTR 20.0%
! AAATATGATGTGAATTCTGT+TGG - Chr1:26476726-26476745 None:intergenic 25.0%
! AAATTGTATATGCTTCTTCA+AGG + Chr1:26474439-26474458 MsG0180001759.01.T01:CDS 25.0%
! AATAGAAATGGAAACCAAAT+AGG + Chr1:26475356-26475375 MsG0180001759.01.T01:intron 25.0%
! AATAGATTTCAACTTGCAAT+AGG - Chr1:26477155-26477174 None:intergenic 25.0%
! AATGTAAAGAGATGAAAAAC+TGG - Chr1:26475750-26475769 None:intergenic 25.0%
! ACCTAATATGAAATTTGGTT+GGG + Chr1:26475554-26475573 MsG0180001759.01.T01:intron 25.0%
! AGGCAGTTATTGAATAAATA+GGG - Chr1:26474153-26474172 None:intergenic 25.0%
! AGTTTGACTATGTATTTGAT+TGG + Chr1:26476930-26476949 MsG0180001759.01.T01:CDS 25.0%
! ATAGTTTGGATTTCTGTAAT+AGG + Chr1:26476683-26476702 MsG0180001759.01.T01:intron 25.0%
! ATGGAAGTAGAAAATAGAAA+TGG + Chr1:26475344-26475363 MsG0180001759.01.T01:intron 25.0%
! CCAAATTAAGAAATCCAAAA+GGG - Chr1:26475695-26475714 None:intergenic 25.0%
! CTACAAAATCTCTACAATTT+CGG + Chr1:26472545-26472564 MsG0180001759.01.T01:five_prime_UTR 25.0%
! CTCTTAAGATATGAATAATC+GGG - Chr1:26476783-26476802 None:intergenic 25.0%
! GAAAATCAGAAAACTTACAT+AGG - Chr1:26475446-26475465 None:intergenic 25.0%
! GAATTGTGAAAGATGAAAAT+TGG - Chr1:26476652-26476671 None:intergenic 25.0%
! GATGCATTGTATTGAATTAA+TGG + Chr1:26473190-26473209 MsG0180001759.01.T01:intron 25.0%
! GTCATTTGGAGAAATTTATT+TGG + Chr1:26472940-26472959 MsG0180001759.01.T01:CDS 25.0%
! TAAGATATGAACTAAGTTGT+TGG + Chr1:26473824-26473843 MsG0180001759.01.T01:intron 25.0%
! TACCTAATATGAAATTTGGT+TGG + Chr1:26475553-26475572 MsG0180001759.01.T01:intron 25.0%
! TAGGCAGTTATTGAATAAAT+AGG - Chr1:26474154-26474173 None:intergenic 25.0%
! TCCAAATTAAGAAATCCAAA+AGG - Chr1:26475696-26475715 None:intergenic 25.0%
! TGTACTTGTGTACTTATTTA+TGG + Chr1:26473712-26473731 MsG0180001759.01.T01:intron 25.0%
! TTTATTCCTGTAATTGACAT+CGG - Chr1:26475281-26475300 None:intergenic 25.0%
!! AAACAAATCACTATTTTCTG+CGG + Chr1:26474659-26474678 MsG0180001759.01.T01:intron 25.0%
!! ACTTTTCTCTATGTTTTCAT+TGG + Chr1:26474366-26474385 MsG0180001759.01.T01:intron 25.0%
!! ATCTTTTATTGCACATTCAT+TGG - Chr1:26475812-26475831 None:intergenic 25.0%
!! TTGAAGAAGCATATACAATT+TGG - Chr1:26474440-26474459 None:intergenic 25.0%
!! TTTTACCGAAAAACAAGAAA+TGG + Chr1:26475325-26475344 MsG0180001759.01.T01:intron 25.0%
!!! AGTTGTTATTTTTGTTAACG+GGG + Chr1:26473294-26473313 MsG0180001759.01.T01:intron 25.0%
!!! CACAATAAATTTTAGTGAAC+GGG - Chr1:26475412-26475431 None:intergenic 25.0%
!!! GCACAATAAATTTTAGTGAA+CGG - Chr1:26475413-26475432 None:intergenic 25.0%
!!! GCACTATTTTTCTTTCAATA+GGG + Chr1:26475950-26475969 MsG0180001759.01.T01:intron 25.0%
!!! TACTTCCATTTCTTGTTTTT+CGG - Chr1:26475333-26475352 None:intergenic 25.0%
!!! TATATCGACTTTTTCTAACT+TGG + Chr1:26475831-26475850 MsG0180001759.01.T01:intron 25.0%
!!! TGCACTATTTTTCTTTCAAT+AGG + Chr1:26475949-26475968 MsG0180001759.01.T01:intron 25.0%
!!! TTAGCTTGCTGTTAAAAATA+TGG - Chr1:26474967-26474986 None:intergenic 25.0%
!!! TTTGGGGTGTTTTTTTTATT+GGG + Chr1:26472855-26472874 MsG0180001759.01.T01:five_prime_UTR 25.0%
!!! TTTTATTGGGTTTGTTATGA+TGG + Chr1:26472868-26472887 MsG0180001759.01.T01:exon 25.0%
!!! TTTTGGGGTGTTTTTTTTAT+TGG + Chr1:26472854-26472873 MsG0180001759.01.T01:five_prime_UTR 25.0%
AAAGTGGTAAATCACATTGA+AGG - Chr1:26475007-26475026 None:intergenic 30.0%
AAATAGTGATCGGAGTAATA+AGG - Chr1:26473338-26473357 None:intergenic 30.0%
AAGAATGATTCTCAAAACAG+AGG + Chr1:26473974-26473993 MsG0180001759.01.T01:intron 30.0%
AATATTCTACTTGGATGCTT+TGG + Chr1:26476418-26476437 MsG0180001759.01.T01:intron 30.0%
AATCAGATTCTTAGAACTTG+AGG - Chr1:26475223-26475242 None:intergenic 30.0%
AGAATGATTCTCAAAACAGA+GGG + Chr1:26473975-26473994 MsG0180001759.01.T01:intron 30.0%
AGTAAACAAATCTTGAAGCA+AGG - Chr1:26473873-26473892 None:intergenic 30.0%
ATTACTCCGATCACTATTTA+GGG + Chr1:26473339-26473358 MsG0180001759.01.T01:intron 30.0%
ATTAGGTAGCAGTTACTATT+AGG - Chr1:26474173-26474192 None:intergenic 30.0%
ATTGGTGGAAAATTCAAACT+TGG + Chr1:26472899-26472918 MsG0180001759.01.T01:CDS 30.0%
CAAAAGGGAAAAAAACACAA+AGG - Chr1:26475680-26475699 None:intergenic 30.0%
CAGGTACCTAATATGAAATT+TGG + Chr1:26475549-26475568 MsG0180001759.01.T01:intron 30.0%
CTCTGTTTATCTAGTTAAAG+TGG - Chr1:26475023-26475042 None:intergenic 30.0%
GCTTTATGATGGTTATTTGT+TGG + Chr1:26474296-26474315 MsG0180001759.01.T01:intron 30.0%
GTAAACAAATCTTGAAGCAA+GGG - Chr1:26473872-26473891 None:intergenic 30.0%
TAAACCCATCAGAAAATTGT+CGG - Chr1:26475091-26475110 None:intergenic 30.0%
TATTACTCCGATCACTATTT+AGG + Chr1:26473338-26473357 MsG0180001759.01.T01:intron 30.0%
TCCCAACCAAATTTCATATT+AGG - Chr1:26475558-26475577 None:intergenic 30.0%
TGAACTGGTATAAATTAGGA+AGG - Chr1:26474486-26474505 None:intergenic 30.0%
TGGAGTAGAACAAAGTAAAA+GGG + Chr1:26472701-26472720 MsG0180001759.01.T01:five_prime_UTR 30.0%
TTAAATAAGTCTTCGAGACT+CGG - Chr1:26474862-26474881 None:intergenic 30.0%
TTCGCAACGAATTTATAGTT+TGG + Chr1:26476669-26476688 MsG0180001759.01.T01:intron 30.0%
TTGGTGGAAAATTCAAACTT+GGG + Chr1:26472900-26472919 MsG0180001759.01.T01:CDS 30.0%
TTTCATATTAGGTACCTGTA+TGG - Chr1:26475547-26475566 None:intergenic 30.0%
TTTGGAAGAACTTTCAACTA+AGG - Chr1:26476866-26476885 None:intergenic 30.0%
TTTGGATAATTGGTTATGTC+AGG + Chr1:26476436-26476455 MsG0180001759.01.T01:intron 30.0%
TTTGTAGGAAAGAAGGAAAA+TGG - Chr1:26472532-26472551 None:intergenic 30.0%
! ACTTTGGATTTGTTTGTTTC+AGG + Chr1:26473036-26473055 MsG0180001759.01.T01:intron 30.0%
! ATAAGGTACTTTCAAAGCTT+TGG - Chr1:26476884-26476903 None:intergenic 30.0%
! ATTAGAAATTGCGCTTTTGT+AGG + Chr1:26476902-26476921 MsG0180001759.01.T01:intron 30.0%
! CAAAAGCGCAATTTCTAATA+AGG - Chr1:26476901-26476920 None:intergenic 30.0%
! CAGGTATACATTATTGACTA+CGG + Chr1:26475478-26475497 MsG0180001759.01.T01:intron 30.0%
! CCCTTTTGGATTTCTTAATT+TGG + Chr1:26475692-26475711 MsG0180001759.01.T01:intron 30.0%
! CGAAATTGTAGAGATTTTGT+AGG - Chr1:26472547-26472566 None:intergenic 30.0%
! TAGAGATTTTGTAGGAAAGA+AGG - Chr1:26472539-26472558 None:intergenic 30.0%
! TTTTAGTGAACGGGATTATA+TGG - Chr1:26475403-26475422 None:intergenic 30.0%
!! GTACTAATGTACTTTTTGAG+AGG + Chr1:26476199-26476218 MsG0180001759.01.T01:CDS 30.0%
!! GTTATGATGGATCTTGTTAT+TGG + Chr1:26472881-26472900 MsG0180001759.01.T01:exon 30.0%
!! TAATGTACTTTTTGAGAGGA+AGG + Chr1:26476203-26476222 MsG0180001759.01.T01:CDS 30.0%
!! TTTGACTTGAATTGTGTTAG+TGG + Chr1:26473232-26473251 MsG0180001759.01.T01:intron 30.0%
!!! CTTTGTGTTTTTTTCCCTTT+TGG + Chr1:26475678-26475697 MsG0180001759.01.T01:intron 30.0%
AAAATTGGAAGTGGGTCATT+TGG + Chr1:26472926-26472945 MsG0180001759.01.T01:CDS 35.0%
AAACCCATCAGAAAATTGTC+GGG - Chr1:26475090-26475109 None:intergenic 35.0%
AAATGGAATGAAAAGCCAGT+GGG - Chr1:26474130-26474149 None:intergenic 35.0%
AACTGTAGAAAGATGAGACA+GGG - Chr1:26475621-26475640 None:intergenic 35.0%
AAGTAAACAGATGCAAATCC+TGG - Chr1:26474708-26474727 None:intergenic 35.0%
AATCCAAAATAAGTACCCAC+TGG + Chr1:26474112-26474131 MsG0180001759.01.T01:intron 35.0%
AATCGAAGTAAGAACGAATC+TGG - Chr1:26472742-26472761 None:intergenic 35.0%
AATGACACTGTCTCAAAGTT+GGG + Chr1:26474242-26474261 MsG0180001759.01.T01:intron 35.0%
ACTTCGATTCAACTAGTGAT+GGG + Chr1:26472753-26472772 MsG0180001759.01.T01:five_prime_UTR 35.0%
AGAAGGAAAATGGATGAGAA+TGG - Chr1:26472522-26472541 None:intergenic 35.0%
ATACCTCATATAAAGTGGTC+TGG + Chr1:26474793-26474812 MsG0180001759.01.T01:CDS 35.0%
ATATCTTAAGAGACTCTTCC+GGG + Chr1:26476791-26476810 MsG0180001759.01.T01:CDS 35.0%
ATCGAAGTAAGAACGAATCT+GGG - Chr1:26472741-26472760 None:intergenic 35.0%
ATTAGGCATGTGATAGAAAC+TGG + Chr1:26473896-26473915 MsG0180001759.01.T01:intron 35.0%
CACATAAGCATATACCATAC+AGG + Chr1:26475530-26475549 MsG0180001759.01.T01:CDS 35.0%
CATATCTTAAGAGACTCTTC+CGG + Chr1:26476790-26476809 MsG0180001759.01.T01:CDS 35.0%
CATGTCATGCTTAAATTCTC+TGG - Chr1:26475183-26475202 None:intergenic 35.0%
CGCATGATGCAGAAAAATAA+TGG - Chr1:26476548-26476567 None:intergenic 35.0%
CGTCATTGTACTTTCTAACT+TGG + Chr1:26476265-26476284 MsG0180001759.01.T01:intron 35.0%
CTATTTCCGATGTCAATTAC+AGG + Chr1:26475272-26475291 MsG0180001759.01.T01:intron 35.0%
CTGGAATACCTCATATAAAG+TGG + Chr1:26474788-26474807 MsG0180001759.01.T01:CDS 35.0%
CTGGAGTAGAACAAAGTAAA+AGG + Chr1:26472700-26472719 MsG0180001759.01.T01:five_prime_UTR 35.0%
GAAAATGCTTACTCCAATAG+AGG + Chr1:26476371-26476390 MsG0180001759.01.T01:CDS 35.0%
GATAACCTTCTCGAATGAAT+AGG - Chr1:26476818-26476837 None:intergenic 35.0%
GCACAAAACTCAATGAAAAC+TGG - Chr1:26475790-26475809 None:intergenic 35.0%
TAACTGTAGAAAGATGAGAC+AGG - Chr1:26475622-26475641 None:intergenic 35.0%
TAATGAAGTTGCTACTGATG+CGG - Chr1:26473637-26473656 None:intergenic 35.0%
TAATTGGTTATGTCAGGATG+AGG + Chr1:26476442-26476461 MsG0180001759.01.T01:intron 35.0%
TACTTCGATTCAACTAGTGA+TGG + Chr1:26472752-26472771 MsG0180001759.01.T01:five_prime_UTR 35.0%
TATCTTCAAACCGCAATGAT+CGG - Chr1:26476758-26476777 None:intergenic 35.0%
TGTAACATTTACAGAGCTGA+AGG - Chr1:26473804-26473823 None:intergenic 35.0%
TGTGCTTCGAGAAAAAACTT+AGG - Chr1:26474325-26474344 None:intergenic 35.0%
TGTTAATGTGCAAACTCAAG+AGG + Chr1:26473059-26473078 MsG0180001759.01.T01:CDS 35.0%
TTCAAACTTGGGAGGAAAAT+TGG + Chr1:26472911-26472930 MsG0180001759.01.T01:CDS 35.0%
TTGTATATGCTTCTTCAAGG+AGG + Chr1:26474442-26474461 MsG0180001759.01.T01:CDS 35.0%
! AATGGAAGTGTGAATGATTG+TGG - Chr1:26472504-26472523 None:intergenic 35.0%
! ACAGGTATTTTGTCCAATTG+CGG - Chr1:26473415-26473434 None:intergenic 35.0%
! ACTTGGATGCTTTGGATAAT+TGG + Chr1:26476426-26476445 MsG0180001759.01.T01:intron 35.0%
! AGAGATGATCTAGAATCACT+TGG + Chr1:26476172-26476191 MsG0180001759.01.T01:CDS 35.0%
! ATTCTTTTTCCAGTCTTCCA+TGG + Chr1:26476295-26476314 MsG0180001759.01.T01:intron 35.0%
! CTTTTGATCAAAGACATGTG+CGG + Chr1:26473454-26473473 MsG0180001759.01.T01:intron 35.0%
! GGTGCTGCCAAAAATAATAA+AGG - Chr1:26475382-26475401 None:intergenic 35.0%
! TGGATTCATGTTGCATGTTT+TGG + Chr1:26473115-26473134 MsG0180001759.01.T01:intron 35.0%
!! AAGCATTGAAGTACCTCTAT+TGG - Chr1:26476387-26476406 None:intergenic 35.0%
!! ATGATGGATCTTGTTATTGG+TGG + Chr1:26472884-26472903 MsG0180001759.01.T01:CDS 35.0%
!! GCCAAAAGTGTTGTTAATAG+CGG + Chr1:26474521-26474540 MsG0180001759.01.T01:intron 35.0%
!! TTTAAGACTGGTTTCACACT+TGG - Chr1:26477087-26477106 None:intergenic 35.0%
!! TTTGGCTTTGTGCTTTATGA+TGG + Chr1:26474285-26474304 MsG0180001759.01.T01:intron 35.0%
!! TTTTTGAGAGGAAGGTTAGT+TGG + Chr1:26476211-26476230 MsG0180001759.01.T01:intron 35.0%
!!! GACAATTTTCTGATGGGTTT+AGG + Chr1:26475090-26475109 MsG0180001759.01.T01:CDS 35.0%
!!! GATCACGATACTTTTTTGCA+AGG - Chr1:26475504-26475523 None:intergenic 35.0%
!!! TATGTTTTCATTGGCTTCTC+AGG + Chr1:26474375-26474394 MsG0180001759.01.T01:intron 35.0%
AACCAAGATGTTCAAGAGCT+TGG + Chr1:26474070-26474089 MsG0180001759.01.T01:intron 40.0%
AAGCTCTTGAACATCTTGGT+TGG - Chr1:26474071-26474090 None:intergenic 40.0%
ACTCCAGACCACTTTATATG+AGG - Chr1:26474799-26474818 None:intergenic 40.0%
ACTGTAGAAAGATGAGACAG+GGG - Chr1:26475620-26475639 None:intergenic 40.0%
AGCACGGAAAGAAATTGAAC+TGG - Chr1:26474501-26474520 None:intergenic 40.0%
AGGGAAAACAAGAATCTCAC+TGG + Chr1:26475969-26475988 MsG0180001759.01.T01:intron 40.0%
AGTAGAGTATATGCACTCTC+GGG + Chr1:26475041-26475060 MsG0180001759.01.T01:CDS 40.0%
ATGAACTACCGACAAAGACA+TGG - Chr1:26473611-26473630 None:intergenic 40.0%
CAATGACACTGTCTCAAAGT+TGG + Chr1:26474241-26474260 MsG0180001759.01.T01:intron 40.0%
CGTCATCCCTAAATAGTGAT+CGG - Chr1:26473348-26473367 None:intergenic 40.0%
CTAGAACTGGATCCAATTTG+TGG - Chr1:26476971-26476990 None:intergenic 40.0%
GAAATGGAATGAAAAGCCAG+TGG - Chr1:26474131-26474150 None:intergenic 40.0%
GAGTAGAGTATATGCACTCT+CGG + Chr1:26475040-26475059 MsG0180001759.01.T01:CDS 40.0%
GATGACGATGAGTAGAGTTT+GGG + Chr1:26473361-26473380 MsG0180001759.01.T01:intron 40.0%
GGTCATGCATATAGACAGAA+GGG - Chr1:26473749-26473768 None:intergenic 40.0%
GTCATGCATATAGACAGAAG+GGG - Chr1:26473748-26473767 None:intergenic 40.0%
GTGGAAAATTCAAACTTGGG+AGG + Chr1:26472903-26472922 MsG0180001759.01.T01:CDS 40.0%
GTTGTCAGTCAGTGCTATAA+CGG + Chr1:26474607-26474626 MsG0180001759.01.T01:intron 40.0%
TCGGAGTAATAAGGAGATCA+TGG - Chr1:26473329-26473348 None:intergenic 40.0%
TGCAATAGGAATACACCTGA+AGG - Chr1:26477141-26477160 None:intergenic 40.0%
TGGTCATGCATATAGACAGA+AGG - Chr1:26473750-26473769 None:intergenic 40.0%
TTCCACTCCTGTTACATGAA+CGG + Chr1:26475925-26475944 MsG0180001759.01.T01:intron 40.0%
TTGGGAGGAAAATTGGAAGT+GGG + Chr1:26472918-26472937 MsG0180001759.01.T01:CDS 40.0%
! AAAGCCCGACAATTTTCTGA+TGG + Chr1:26475083-26475102 MsG0180001759.01.T01:CDS 40.0%
! AAGCCAGTGGGTACTTATTT+TGG - Chr1:26474118-26474137 None:intergenic 40.0%
! AAGCCCGACAATTTTCTGAT+GGG + Chr1:26475084-26475103 MsG0180001759.01.T01:CDS 40.0%
! ATAAAGTGGTCTGGAGTTGA+GGG + Chr1:26474802-26474821 MsG0180001759.01.T01:CDS 40.0%
! ATTTTGTCCAATTGCGGGTA+AGG - Chr1:26473409-26473428 None:intergenic 40.0%
! CAGGTATTTTGTCCAATTGC+GGG - Chr1:26473414-26473433 None:intergenic 40.0%
! GCCGCTATTAACAACACTTT+TGG - Chr1:26474525-26474544 None:intergenic 40.0%
! TAACAACACTTTTGGCAGCA+CGG - Chr1:26474517-26474536 None:intergenic 40.0%
! TAGATACCTGATTTGCCTTG+CGG - Chr1:26475116-26475135 None:intergenic 40.0%
! TATAAAGTGGTCTGGAGTTG+AGG + Chr1:26474801-26474820 MsG0180001759.01.T01:CDS 40.0%
!! CAAAAGTGTCTATGCTACAG+TGG - Chr1:26473440-26473459 None:intergenic 40.0%
!! CAACTTTGAGACAGTGTCAT+TGG - Chr1:26474243-26474262 None:intergenic 40.0%
!! TTGGATCCAGTTCTAGAACA+CGG + Chr1:26476975-26476994 MsG0180001759.01.T01:CDS 40.0%
AACCGTTCATGTAACAGGAG+TGG - Chr1:26475930-26475949 None:intergenic 45.0%
AGTGCAACCGTTCATGTAAC+AGG - Chr1:26475935-26475954 None:intergenic 45.0%
CAGAGAGAAGAGTGAGGATT+TGG - Chr1:26472606-26472625 None:intergenic 45.0%
CATAGTTAAGCAGAGTCGTG+TGG - Chr1:26473775-26473794 None:intergenic 45.0%
CTTCTCGAATGAATAGGTCC+CGG - Chr1:26476812-26476831 None:intergenic 45.0%
CTTGGGAGGAAAATTGGAAG+TGG + Chr1:26472917-26472936 MsG0180001759.01.T01:CDS 45.0%
GACCAAGCTCTTGAACATCT+TGG - Chr1:26474075-26474094 None:intergenic 45.0%
GCAAGTGTTAACACTCACCT+TGG + Chr1:26476005-26476024 MsG0180001759.01.T01:CDS 45.0%
GCTATAGCACTATTGCGTAG+CGG + Chr1:26474631-26474650 MsG0180001759.01.T01:intron 45.0%
GCTGGTGAGTGAAGTTGTTA+TGG + Chr1:26473095-26473114 MsG0180001759.01.T01:intron 45.0%
GGATGACGATGAGTAGAGTT+TGG + Chr1:26473360-26473379 MsG0180001759.01.T01:intron 45.0%
GTAGAGTATATGCACTCTCG+GGG + Chr1:26475042-26475061 MsG0180001759.01.T01:CDS 45.0%
GTCTATGCTACAGTGGATAC+AGG - Chr1:26473433-26473452 None:intergenic 45.0%
GTGAAACCAGTCTTAAACCC+AGG + Chr1:26477090-26477109 MsG0180001759.01.T01:CDS 45.0%
GTTAACACTCACCTTGGAGT+TGG + Chr1:26476011-26476030 MsG0180001759.01.T01:CDS 45.0%
TCCACTATTGCCGATCATTG+CGG + Chr1:26476745-26476764 MsG0180001759.01.T01:CDS 45.0%
TCTGGTGTCCATGTCTTTGT+CGG + Chr1:26473600-26473619 MsG0180001759.01.T01:intron 45.0%
TGAGGATGCTTTGTCTTCAC+AGG - Chr1:26474403-26474422 None:intergenic 45.0%
TGAGGGTGAGTACAATGTCA+TGG + Chr1:26474819-26474838 MsG0180001759.01.T01:CDS 45.0%
TGTTAATAGCGGCTATAGCG+TGG + Chr1:26474532-26474551 MsG0180001759.01.T01:intron 45.0%
TTGAGGAATGCCAGTTAGAG+AGG - Chr1:26475206-26475225 None:intergenic 45.0%
TTGGACTCGTAGAGAAGTTG+AGG - Chr1:26474421-26474440 None:intergenic 45.0%
! AGAGGAAGTTGCTGTTAAGC+TGG + Chr1:26473077-26473096 MsG0180001759.01.T01:CDS 45.0%
! GGAAGTGTGAATGATTGTGG+TGG - Chr1:26472501-26472520 None:intergenic 45.0%
! TTTTCCAGTCTTCCATGGCA+AGG + Chr1:26476300-26476319 MsG0180001759.01.T01:intron 45.0%
!! TGGATCCAGTTCTAGAACAC+GGG + Chr1:26476976-26476995 MsG0180001759.01.T01:CDS 45.0%
!! AATTTAAAAAAAAAATCTAA+TGG - Chr1:26472648-26472667 None:intergenic 5.0%
!! ATTTAAAAAAAAAATCTAAT+GGG - Chr1:26472647-26472666 None:intergenic 5.0%
!!! AGTATTTTTATTAAATTATT+AGG - Chr1:26474190-26474209 None:intergenic 5.0%
ACCGCAATGATCGGCAATAG+TGG - Chr1:26476749-26476768 None:intergenic 50.0%
ACGATGAGTAGAGTTTGGGC+AGG + Chr1:26473365-26473384 MsG0180001759.01.T01:intron 50.0%
ACTCGGTCCAAGAAGGTCAA+TGG - Chr1:26474845-26474864 None:intergenic 50.0%
AGTCAGACAGTGACACGATG+TGG - Chr1:26473484-26473503 None:intergenic 50.0%
CATCTGGAGAGCGACTAGAA+CGG + Chr1:26477115-26477134 MsG0180001759.01.T01:CDS 50.0%
CATTCCTTGCCATGGAAGAC+TGG - Chr1:26476307-26476326 None:intergenic 50.0%
CCAGCTTTCATTCCTTGCCA+TGG - Chr1:26476315-26476334 None:intergenic 50.0%
CCATGGCAAGGAATGAAAGC+TGG + Chr1:26476312-26476331 MsG0180001759.01.T01:CDS 50.0%
CGATGAGTAGAGTTTGGGCA+GGG + Chr1:26473366-26473385 MsG0180001759.01.T01:intron 50.0%
CGGGACCTATTCATTCGAGA+AGG + Chr1:26476810-26476829 MsG0180001759.01.T01:CDS 50.0%
CTGACACGAACACGTCAACA+CGG - Chr1:26473566-26473585 None:intergenic 50.0%
CTTGTCTCCTTACCCGCAAT+TGG + Chr1:26473399-26473418 MsG0180001759.01.T01:intron 50.0%
GACAGGGGACAACATACTCA+AGG - Chr1:26475605-26475624 None:intergenic 50.0%
GCATGACATGCCTCTCTAAC+TGG + Chr1:26475193-26475212 MsG0180001759.01.T01:intron 50.0%
GTCAGACAGTGACACGATGT+GGG - Chr1:26473483-26473502 None:intergenic 50.0%
GTCATGGCCATTGACCTTCT+TGG + Chr1:26474835-26474854 MsG0180001759.01.T01:CDS 50.0%
GTCTTAAACCCAGGACCATC+TGG + Chr1:26477099-26477118 MsG0180001759.01.T01:CDS 50.0%
TAATAGCGGCTATAGCGTGG+TGG + Chr1:26474535-26474554 MsG0180001759.01.T01:intron 50.0%
TGACACGAACACGTCAACAC+GGG - Chr1:26473565-26473584 None:intergenic 50.0%
TGAGGATTTGGATCTGTGCG+TGG - Chr1:26472594-26472613 None:intergenic 50.0%
TTAAGCAGAGTCGTGTGGTG+TGG - Chr1:26473770-26473789 None:intergenic 50.0%
TTGACGCAGAGAGAAGAGTG+AGG - Chr1:26472612-26472631 None:intergenic 50.0%
TTTAGGCCGCAAGGCAAATC+AGG + Chr1:26475107-26475126 MsG0180001759.01.T01:CDS 50.0%
! GATGGTCCTGGGTTTAAGAC+TGG - Chr1:26477099-26477118 None:intergenic 50.0%
!! ACTCACCCGTGTTCTAGAAC+TGG - Chr1:26476984-26477003 None:intergenic 50.0%
CGGTATGCGATTGACAGCAC+TGG + Chr1:26474679-26474698 MsG0180001759.01.T01:intron 55.0%
CGTTCTAGTCGCTCTCCAGA+TGG - Chr1:26477117-26477136 None:intergenic 55.0%
GGATTTGGATCTGTGCGTGG+AGG - Chr1:26472591-26472610 None:intergenic 55.0%
TGCCTCACTCACCAACTCCA+AGG - Chr1:26476025-26476044 None:intergenic 55.0%
! CTTCGAGACTCGGTCCAAGA+AGG - Chr1:26474852-26474871 None:intergenic 55.0%
! TCAGTGTCGAGTGTCGTGTC+TGG + Chr1:26473582-26473601 MsG0180001759.01.T01:intron 55.0%
!! CACCTTGGAGTTGGTGAGTG+AGG + Chr1:26476020-26476039 MsG0180001759.01.T01:intron 55.0%
!! TCTGATGGGTTTAGGCCGCA+AGG + Chr1:26475098-26475117 MsG0180001759.01.T01:CDS 55.0%
AGTCGCTCTCCAGATGGTCC+TGG - Chr1:26477111-26477130 None:intergenic 60.0%
GAGCGACTAGAACGGCCTTC+AGG + Chr1:26477123-26477142 MsG0180001759.01.T01:CDS 60.0%
GGATCTGTGCGTGGAGGTGA+AGG - Chr1:26472585-26472604 None:intergenic 60.0%
GTCGCTCTCCAGATGGTCCT+GGG - Chr1:26477110-26477129 None:intergenic 60.0%
!! GATTGACAGCACTGGCAGCC+AGG + Chr1:26474687-26474706 MsG0180001759.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 26472469 26477215 26472469 ID=MsG0180001759.01;Name=MsG0180001759.01
Chr1 mRNA 26472469 26477215 26472469 ID=MsG0180001759.01.T01;Parent=MsG0180001759.01;Name=MsG0180001759.01.T01;_AED=0.42;_eAED=0.44;_QI=395|1|0.92|1|0.91|0.84|13|0|349
Chr1 exon 26472469 26472660 26472469 ID=MsG0180001759.01.T01:exon:18539;Parent=MsG0180001759.01.T01
Chr1 exon 26472681 26472962 26472681 ID=MsG0180001759.01.T01:exon:18540;Parent=MsG0180001759.01.T01
Chr1 five_prime_UTR 26472469 26472660 26472469 ID=MsG0180001759.01.T01:five_prime_utr;Parent=MsG0180001759.01.T01
Chr1 five_prime_UTR 26472681 26472883 26472681 ID=MsG0180001759.01.T01:five_prime_utr;Parent=MsG0180001759.01.T01
Chr1 CDS 26472884 26472962 26472884 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26473058 26473098 26473058 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26474397 26474466 26474397 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26474788 26474936 26474788 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26475033 26475128 26475033 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26475481 26475551 26475481 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26475971 26476032 26475971 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26476161 26476224 26476161 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26476308 26476392 26476308 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26476705 26476831 26476705 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26476924 26476997 26476924 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 CDS 26477084 26477215 26477084 ID=MsG0180001759.01.T01:cds;Parent=MsG0180001759.01.T01
Chr1 mRNA 26472655 26477215 26472655 ID=MsG0180001759.01.T02;Parent=MsG0180001759.01;Name=MsG0180001759.01.T02;_AED=0.43;_eAED=0.45;_QI=229|1|0.91|1|1|1|12|0|349
Chr1 exon 26472655 26472962 26472655 ID=MsG0180001759.01.T02:exon:18552;Parent=MsG0180001759.01.T02
Chr1 five_prime_UTR 26472655 26472883 26472655 ID=MsG0180001759.01.T02:five_prime_utr;Parent=MsG0180001759.01.T02
Chr1 CDS 26472884 26472962 26472884 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26473058 26473098 26473058 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26474397 26474466 26474397 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26474788 26474936 26474788 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26475033 26475128 26475033 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26475481 26475551 26475481 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26475971 26476032 26475971 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26476161 26476224 26476161 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26476308 26476392 26476308 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26476705 26476831 26476705 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26476924 26476997 26476924 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Chr1 CDS 26477084 26477215 26477084 ID=MsG0180001759.01.T02:cds;Parent=MsG0180001759.01.T02
Gene Sequence

>MsG0180001759.01.T01

ATGATGGATCTTGTTATTGGTGGAAAATTCAAACTTGGGAGGAAAATTGGAAGTGGGTCATTTGGAGAAATTTATTTGGGTGTTAATGTGCAAACTCAAGAGGAAGTTGCTGTTAAGCTGGAACCTGTGAAGACAAAGCATCCTCAACTTCTCTACGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCTCATATAAAGTGGTCTGGAGTTGAGGGTGAGTACAATGTCATGGCCATTGACCTTCTTGGACCGAGTCTCGAAGACTTATTTAACTATTGTAGTAGAAAATTCTCTCTTAAGACAGTGTTGATGCTTGCTGATCAACTAATAAACAGAGTAGAGTATATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCCGACAATTTTCTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTACGGCCTTGCAAAAAAGTATCGTGATCTTCAGACACATAAGCATATACCATACAGGGAAAACAAGAATCTCACTGGAACTGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGTAGAAGAGATGATCTAGAATCACTTGGTTATGTACTAATGTACTTTTTGAGAGGAAGTCTTCCATGGCAAGGAATGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATAAGTGAAAAGAAAATGCTTACTCCAATAGAGGTATTGTGCAAGTCACATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGGGACCTATTCATTCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAATATCCACAAATTGGATCCAGTTCTAGAACACGGCCAAGTGTGAAACCAGTCTTAAACCCAGGACCATCTGGAGAGCGACTAGAACGGCCTTCAGGTGTATTCCTATTGCAAGTTGAAATCTATTACATTCTGAAGCATTTCACTGCTATGCTGATAAGACATTAA

>MsG0180001759.01.T02

ATGATGGATCTTGTTATTGGTGGAAAATTCAAACTTGGGAGGAAAATTGGAAGTGGGTCATTTGGAGAAATTTATTTGGGTGTTAATGTGCAAACTCAAGAGGAAGTTGCTGTTAAGCTGGAACCTGTGAAGACAAAGCATCCTCAACTTCTCTACGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCTCATATAAAGTGGTCTGGAGTTGAGGGTGAGTACAATGTCATGGCCATTGACCTTCTTGGACCGAGTCTCGAAGACTTATTTAACTATTGTAGTAGAAAATTCTCTCTTAAGACAGTGTTGATGCTTGCTGATCAACTAATAAACAGAGTAGAGTATATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCCGACAATTTTCTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTACGGCCTTGCAAAAAAGTATCGTGATCTTCAGACACATAAGCATATACCATACAGGGAAAACAAGAATCTCACTGGAACTGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGTAGAAGAGATGATCTAGAATCACTTGGTTATGTACTAATGTACTTTTTGAGAGGAAGTCTTCCATGGCAAGGAATGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATAAGTGAAAAGAAAATGCTTACTCCAATAGAGGTATTGTGCAAGTCACATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGGGACCTATTCATTCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAATATCCACAAATTGGATCCAGTTCTAGAACACGGCCAAGTGTGAAACCAGTCTTAAACCCAGGACCATCTGGAGAGCGACTAGAACGGCCTTCAGGTGTATTCCTATTGCAAGTTGAAATCTATTACATTCTGAAGCATTTCACTGCTATGCTGATAAGACATTAA
Protein sequence

>MsG0180001759.01.T01

MMDLVIGGKFKLGRKIGSGSFGEIYLGVNVQTQEEVAVKLEPVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGEYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPVLNPGPSGERLERPSGVFLLQVEIYYILKHFTAMLIRH*

>MsG0180001759.01.T02

MMDLVIGGKFKLGRKIGSGSFGEIYLGVNVQTQEEVAVKLEPVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGEYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPVLNPGPSGERLERPSGVFLLQVEIYYILKHFTAMLIRH*