AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001857.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001857.01.T01 MTR_8g011200 65.802 1620 331 18 13 1426 35 1637 0.0 1998
MsG0180001857.01.T01 MTR_8g090165 72.703 1132 203 12 1 1042 1 1116 0.0 1556
MsG0180001857.01.T01 MTR_8g090165 70.066 755 129 8 760 1426 957 1702 0.0 1003
MsG0180001857.01.T01 MTR_8g090165 31.597 288 165 10 797 1072 766 1033 2.95e-26 118
MsG0180001857.01.T01 MTR_2g067030 68.860 1079 224 15 1 1042 1 1004 0.0 1393
MsG0180001857.01.T01 MTR_2g067030 66.446 754 153 7 760 1425 844 1585 0.0 956
MsG0180001857.01.T01 MTR_2g067030 29.537 281 164 10 806 1072 661 921 1.57e-22 105
MsG0180001857.01.T01 MTR_3g408440 57.154 1237 386 18 3 1111 5 1225 0.0 1302
MsG0180001857.01.T01 MTR_3g408440 52.902 758 255 12 760 1426 963 1709 0.0 715
MsG0180001857.01.T01 MTR_8g011330 57.352 1231 389 18 1 1110 1 1216 0.0 1290
MsG0180001857.01.T01 MTR_8g011330 52.910 756 253 9 760 1426 961 1702 0.0 733
MsG0180001857.01.T01 MTR_8g011210 56.412 1232 397 19 1 1110 1 1214 0.0 1240
MsG0180001857.01.T01 MTR_8g011210 49.073 809 278 13 734 1426 909 1699 0.0 697
MsG0180001857.01.T01 MTR_8g011210 26.866 201 114 5 728 901 1121 1315 5.71e-11 68.2
MsG0180001857.01.T01 MTR_8g011230 53.543 1242 417 24 1 1110 1 1214 0.0 1173
MsG0180001857.01.T01 MTR_8g011230 50.562 801 266 11 740 1425 912 1697 0.0 720
MsG0180001857.01.T01 MTR_6g015173 49.170 783 270 16 339 1028 256 1003 0.0 648
MsG0180001857.01.T01 MTR_6g015173 40.678 708 298 14 792 1424 656 1316 4.51e-139 461
MsG0180001857.01.T01 MTR_6g015173 76.471 221 50 2 51 270 39 258 6.60e-91 323
MsG0180001857.01.T01 MTR_8g085280 30.407 467 248 17 8 445 1144 1562 9.65e-45 179
MsG0180001857.01.T01 MTR_6g015170 79.487 39 8 0 7 45 38 76 3.50e-14 70.5
MsG0180001857.01.T01 MTR_5g039040 80.000 40 8 0 182 221 77 116 1.16e-13 69.3
MsG0180001857.01.T01 MTR_7g016690 76.190 42 10 0 182 223 47 88 2.14e-13 67.8
MsG0180001857.01.T01 MTR_7g012050 74.359 39 10 0 181 219 11 49 3.42e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001857.01.T01 AT3G48770 46.629 1231 500 21 3 1103 195 1398 0.0 1012
MsG0180001857.01.T01 AT3G48770 32.550 808 406 19 743 1423 1100 1895 1.22e-113 396
MsG0180001857.01.T01 AT3G48770 46.629 1231 500 21 3 1103 195 1398 0.0 1012
MsG0180001857.01.T01 AT3G48770 32.550 808 406 19 743 1423 1100 1895 1.22e-113 396
MsG0180001857.01.T01 AT3G28020 42.222 270 93 7 155 423 36 243 2.48e-53 187
MsG0180001857.01.T01 AT4G13750 33.079 393 196 16 8 376 1162 1511 6.80e-39 160

Find 318 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTGGACTTCAAGATTTA+AGG 0.097894 1:+28309639 MsG0180001857.01.T01:CDS
CAATTGCATTGAGTTCTTTC+TGG 0.136319 1:-28311947 None:intergenic
CGGATTCAAGAGTGTGTTTC+TGG 0.154146 1:+28308439 MsG0180001857.01.T01:CDS
GTAAGAAACAAAAGAATTTC+TGG 0.157039 1:-28308695 None:intergenic
CTTGAGGCTCATCCAACTTC+TGG 0.160539 1:-28313031 None:intergenic
TATTTCTGCCCAAATGTTTC+AGG 0.185928 1:-28312471 None:intergenic
ATAAAGCTGCCAAGAAAATT+TGG 0.198820 1:+28312197 MsG0180001857.01.T01:CDS
GCCCATTTGCTCACATTTGC+AGG 0.230967 1:-28310139 None:intergenic
GGCTTCTCCTCAACCCATTC+AGG 0.234048 1:-28308551 None:intergenic
AAGTAAGATTGATCAATAAA+AGG 0.238617 1:-28310897 None:intergenic
CTTCCATGGCAAAGGTAAAA+AGG 0.239279 1:-28312342 None:intergenic
GAAAGAGATTGTCCAGAAAT+TGG 0.251652 1:+28311794 MsG0180001857.01.T01:CDS
ATGCCACTTGTTGACAACTA+TGG 0.253963 1:+28310082 MsG0180001857.01.T01:CDS
ATGTGTTCCATCGGCCTTTA+TGG 0.256561 1:+28309153 MsG0180001857.01.T01:CDS
TCTTATGCAGGCCAATTTAC+AGG 0.257247 1:+28310235 MsG0180001857.01.T01:CDS
GAAGGAAAATTCAGACATTT+AGG 0.259909 1:-28311673 None:intergenic
CTATGAAGCCTCTCCTGATT+TGG 0.260100 1:-28308986 None:intergenic
TCTTTACTTCCTGTTGTTAC+AGG 0.269749 1:-28312529 None:intergenic
CAATTCTCTTGGATAATAAA+TGG 0.271572 1:+28309113 MsG0180001857.01.T01:CDS
TTGATGATTATGTTGATCTT+TGG 0.277427 1:+28312383 MsG0180001857.01.T01:CDS
CCATATAAAATGCATTGTTT+TGG 0.280327 1:-28311502 None:intergenic
AACTGGACTTCAAGATTTAA+GGG 0.282349 1:+28309640 MsG0180001857.01.T01:CDS
CTGCATAAGATGAGGAATTT+AGG 0.289962 1:-28310222 None:intergenic
GCTCCTACTGCCTTTCTTTG+TGG 0.294396 1:-28308145 None:intergenic
AGCTTCCGGAACCTGTAAAT+TGG 0.297426 1:-28310246 None:intergenic
ATGTGTCTTCAACCAATTTC+TGG 0.298209 1:-28311806 None:intergenic
TCTTGTCTGGTTCCATCTTC+AGG 0.306825 1:-28312851 None:intergenic
GATGTTTATCCTGAAACATT+TGG 0.311080 1:+28312462 MsG0180001857.01.T01:CDS
GAAGACTTCTCCTGAGATAT+TGG 0.326955 1:-28310743 None:intergenic
GTAGGCTGCTGTCTGAATTC+TGG 0.327095 1:+28309383 MsG0180001857.01.T01:CDS
CTCTCGGAATTGATCACGTT+GGG 0.328535 1:+28313137 MsG0180001857.01.T01:CDS
ATTCCATCAAAGTCTGCTTC+TGG 0.333193 1:-28309887 None:intergenic
GCAGGCCAATTTACAGGTTC+CGG 0.339123 1:+28310241 MsG0180001857.01.T01:CDS
GGTTTGATTAAGCTCATTCT+TGG 0.339656 1:+28312810 MsG0180001857.01.T01:CDS
ATGACAAAAGCTGTAAATTC+TGG 0.340258 1:+28312440 MsG0180001857.01.T01:CDS
ATCTCTTCAACGTGTTCTTT+TGG 0.340965 1:-28306574 None:intergenic
CATGTGGAAGCAAAAGTTTC+CGG 0.342746 1:+28308898 MsG0180001857.01.T01:CDS
AGTGGTTACATAGGAGAAAA+AGG 0.344421 1:+28308168 MsG0180001857.01.T01:CDS
TTACCTTTGCCATGGAAGTC+AGG 0.345233 1:+28312347 MsG0180001857.01.T01:CDS
CAAATCAGGAGAGGCTTCAT+AGG 0.348815 1:+28308987 MsG0180001857.01.T01:CDS
CCTTGTCCACATTGCAGTCT+TGG 0.356946 1:+28308518 MsG0180001857.01.T01:CDS
TAAAGACATCTGAAGGTCTT+AGG 0.357258 1:+28310811 MsG0180001857.01.T01:CDS
TACAAAGAAAGATGACAAAA+TGG 0.363418 1:+28312974 MsG0180001857.01.T01:CDS
CATAGGGGTAAAAGCTCATC+AGG 0.365660 1:+28309004 MsG0180001857.01.T01:CDS
CTTGAAAGCTGCTGTTTGAC+AGG 0.370753 1:-28308665 None:intergenic
ACACAGTGAAGACTCCTTCT+TGG 0.370844 1:-28306450 None:intergenic
TATGAAGCCTCTCCTGATTT+GGG 0.372971 1:-28308985 None:intergenic
GGATCTTCCAACACTGCATA+TGG 0.373636 1:-28308124 None:intergenic
GAAGAGGAGTTGAAAACAAT+TGG 0.375017 1:+28310609 MsG0180001857.01.T01:CDS
CTCAAATGACGAAATTTCAA+TGG 0.377446 1:-28309251 None:intergenic
CTTTCTGAACTTATCATCAA+TGG 0.377615 1:-28311776 None:intergenic
ACTTGATTGTTTCTAATCCT+TGG 0.377953 1:+28310164 MsG0180001857.01.T01:CDS
ACAGCTTCATGCCTCTTGTC+TGG 0.379764 1:-28312864 None:intergenic
AGAGAATGGTTTACTTCTCT+TGG 0.380192 1:-28306498 None:intergenic
TGAGGAAATTAATAAGCTTC+CGG 0.383879 1:-28310260 None:intergenic
GTTGACCTTATCTTGCTTCA+AGG 0.386857 1:-28308642 None:intergenic
GTTGACATAAAGCAGATATA+TGG 0.387873 1:+28308581 MsG0180001857.01.T01:CDS
ATTTCCTCACAACTCATGTT+GGG 0.388747 1:+28310274 MsG0180001857.01.T01:CDS
AAAGAGGAGCTGAAGTTGTT+AGG 0.388855 1:+28310942 MsG0180001857.01.T01:CDS
AGCAAAGAAAACACACTTTC+AGG 0.390400 1:-28311715 None:intergenic
TGTTCCTATTGAGACATATA+CGG 0.391305 1:+28309327 MsG0180001857.01.T01:CDS
TTTACATGCTTCCTCACAAC+TGG 0.393777 1:-28310640 None:intergenic
AAAGGATGCTCCTTGCTTGC+CGG 0.394081 1:+28311990 MsG0180001857.01.T01:CDS
ACGGCTGAAAACCCAGCATT+TGG 0.395599 1:-28310324 None:intergenic
GAGGAAGCATGTAAATTCAT+TGG 0.395863 1:+28310648 MsG0180001857.01.T01:CDS
TATAGTCTATCACTGTCATC+AGG 0.401318 1:+28312942 MsG0180001857.01.T01:CDS
ATGTTTATCCTGAAACATTT+GGG 0.401487 1:+28312463 MsG0180001857.01.T01:CDS
GGCAAGACAATTGTTGTAGT+TGG 0.402161 1:-28308620 None:intergenic
CTGTAATGAAATGAAGTATC+AGG 0.403336 1:-28306529 None:intergenic
GGATCTGTATTGAATGATTC+CGG 0.406210 1:+28310843 MsG0180001857.01.T01:CDS
TTCTTGGCAGCTTTATCCTC+AGG 0.409894 1:-28312190 None:intergenic
TTCTTGTCGCAGGCTGCTGA+AGG 0.411046 1:+28311393 MsG0180001857.01.T01:CDS
TTTATTGATCAATCTTACTT+TGG 0.412553 1:+28310900 MsG0180001857.01.T01:CDS
ATGTTGATCTTTGGAATGAA+TGG 0.413066 1:+28312392 MsG0180001857.01.T01:CDS
TCAAGCTCCAGTATCAAGTT+TGG 0.413665 1:+28309207 MsG0180001857.01.T01:CDS
GCATTCAAAACACTTGTTGT+AGG 0.419093 1:+28309178 MsG0180001857.01.T01:CDS
AGATCCTCAGTCAAAGGATT+AGG 0.423767 1:-28306628 None:intergenic
TTCCATCAAAGTCTGCTTCT+GGG 0.425936 1:-28309886 None:intergenic
TCTCCCATTGGACAAATTTG+TGG 0.428285 1:+28310764 MsG0180001857.01.T01:CDS
CATATATCTCCTCCAAATGC+TGG 0.433127 1:+28310312 MsG0180001857.01.T01:CDS
GACACTGGCCTTCCCAAATC+AGG 0.433616 1:+28308973 MsG0180001857.01.T01:CDS
CTTAACCTATCTTCTCATGA+TGG 0.437612 1:+28309445 MsG0180001857.01.T01:CDS
TTGGATATATAGTTCCTGAA+TGG 0.438129 1:+28308537 MsG0180001857.01.T01:CDS
GCTTCACTCCCTCATTATAG+TGG 0.438837 1:-28307993 None:intergenic
GGTACTTGTCTGAATACAAC+TGG 0.439001 1:+28312164 MsG0180001857.01.T01:intron
GGCCCAGAAGCAGACTTTGA+TGG 0.440259 1:+28309884 MsG0180001857.01.T01:CDS
AGTAAGATTGATCAATAAAA+GGG 0.440490 1:-28310896 None:intergenic
TGCTTTATGTCAACAAGGGT+TGG 0.441323 1:-28308572 None:intergenic
ATACGAGCCAAACTTGATAC+TGG 0.441512 1:-28309214 None:intergenic
CCACTTCTGACTATGTATAA+TGG 0.444704 1:-28311449 None:intergenic
TGTCATTTCTTTCTTGTCGC+AGG 0.446300 1:+28311383 MsG0180001857.01.T01:CDS
ATACTATTGTCAAAATATAT+AGG 0.448506 1:+28312039 MsG0180001857.01.T01:CDS
GAATGAATGGGAGAGTTCGC+TGG 0.449620 1:+28312405 MsG0180001857.01.T01:CDS
TGAAGACACATGCTGGCTAT+AGG 0.450289 1:+28311818 MsG0180001857.01.T01:CDS
CAGAGAAGAAACTTTCTAAG+AGG 0.450989 1:+28312494 MsG0180001857.01.T01:CDS
GATGTCATATAACTTAGAAA+TGG 0.450996 1:-28312667 None:intergenic
TGCCTGCAAATGTGAGCAAA+TGG 0.454255 1:+28310137 MsG0180001857.01.T01:CDS
TGGCTTAAAGTTACCGTCAA+TGG 0.462762 1:+28310460 MsG0180001857.01.T01:CDS
TCAAATGACGAAATTTCAAT+GGG 0.463827 1:-28309250 None:intergenic
GTACTTGAATTAGTTCCATC+AGG 0.465919 1:-28306705 None:intergenic
GAGAACAGATGTTGAAGAAT+GGG 0.466265 1:+28308946 MsG0180001857.01.T01:CDS
TTAAACAAGTGACCGTTGAT+TGG 0.468157 1:+28309533 MsG0180001857.01.T01:CDS
GCAAAAGGCTATCTTGAGAT+TGG 0.468538 1:+28309863 MsG0180001857.01.T01:CDS
TTAGCAATGGATATCAGATA+AGG 0.469431 1:+28308483 MsG0180001857.01.T01:CDS
TTGTGATGCTACTTTCCATC+CGG 0.471037 1:-28310862 None:intergenic
GGAGAACAGATGTTGAAGAA+TGG 0.473141 1:+28308945 MsG0180001857.01.T01:CDS
ATCAAACAACAACACATCTC+TGG 0.473509 1:-28311844 None:intergenic
AGCAAACTACCTGTAACAAC+AGG 0.473796 1:+28312520 MsG0180001857.01.T01:CDS
CGAATTAAGAACGACTTTGA+AGG 0.474158 1:-28310493 None:intergenic
AGAGAAGTTAATGAAAATCC+TGG 0.475479 1:+28308740 MsG0180001857.01.T01:CDS
TGGATATATAGTTCCTGAAT+GGG 0.476182 1:+28308538 MsG0180001857.01.T01:CDS
TATGCCAGAAAGCACGCAAA+AGG 0.477656 1:+28309848 MsG0180001857.01.T01:intron
ATCTAGGGAGACAATTCTCT+TGG 0.478692 1:+28309102 MsG0180001857.01.T01:CDS
ATAAGCCTGGTGAAGTTAGT+AGG 0.479139 1:+28309365 MsG0180001857.01.T01:CDS
GTTTGATTAAGCTCATTCTT+GGG 0.481039 1:+28312811 MsG0180001857.01.T01:CDS
GTTTCTAATCCTTGGAGCAA+TGG 0.481978 1:+28310172 MsG0180001857.01.T01:CDS
TTACAGTTGCAGAAGATCAA+TGG 0.482601 1:+28306546 MsG0180001857.01.T01:exon
CAAGTACACTCCTTCGTCTC+GGG 0.483228 1:-28309422 None:intergenic
TCCTCCCATCATGAGAAGAT+AGG 0.486346 1:-28309450 None:intergenic
AAGTTACCGTCAATGGATAC+AGG 0.486746 1:+28310467 MsG0180001857.01.T01:CDS
ATAAAATATGTGGCTTCTGA+TGG 0.487168 1:+28309688 MsG0180001857.01.T01:CDS
TGCTCCGTATATGTCTCAAT+AGG 0.487338 1:-28309331 None:intergenic
TGTCCACAAATTTGTCCAAT+GGG 0.489059 1:-28310767 None:intergenic
CAGTCCACCTTCAGTTCCAT+TGG 0.490288 1:-28312223 None:intergenic
AGACTATAGCTAACCGTGAC+CGG 0.491667 1:-28312927 None:intergenic
TGTTGATCTTTGGAATGAAT+GGG 0.493934 1:+28312393 MsG0180001857.01.T01:CDS
CATTAACTTCTCTTACAGAA+AGG 0.494102 1:-28308730 None:intergenic
TGCTTCTCTCTTCAAACAGA+AGG 0.494400 1:+28311327 MsG0180001857.01.T01:CDS
TATTCCATTGATAAAATATG+TGG 0.495033 1:+28309678 MsG0180001857.01.T01:CDS
TGAAGATATTGAATTTCTGA+TGG 0.495113 1:+28313181 MsG0180001857.01.T01:CDS
AATTTCCTCACAACTCATGT+TGG 0.495542 1:+28310273 MsG0180001857.01.T01:CDS
CTTGCCCTTGAAGCAAGATA+AGG 0.496303 1:+28308637 MsG0180001857.01.T01:CDS
CTCGGCGGAGAGATTCTTAA+CGG 0.496567 1:-28306659 None:intergenic
GCTGAATGATGGTGTTGAAA+TGG 0.500210 1:+28312749 MsG0180001857.01.T01:CDS
GCAGTTACAGTGCTCTGTCC+AGG 0.503037 1:-28308758 None:intergenic
TTGACCTTATCTTGCTTCAA+GGG 0.503355 1:-28308641 None:intergenic
ATGAAAGGGAGACAAGTAAT+CGG 0.503529 1:-28311547 None:intergenic
TACCTTTGCCATGGAAGTCA+GGG 0.503912 1:+28312348 MsG0180001857.01.T01:CDS
AGTAGGAGCAGTGGTTACAT+AGG 0.504815 1:+28308159 MsG0180001857.01.T01:CDS
TTAACTTCATCCAATATCTC+AGG 0.505159 1:+28310733 MsG0180001857.01.T01:CDS
CAGGAGAAGTCTTCTCCCAT+TGG 0.507963 1:+28310752 MsG0180001857.01.T01:CDS
TCTGATGACATTACTGCTAC+TGG 0.509465 1:+28308039 MsG0180001857.01.T01:CDS
TGCTTGTGCTAGCCTGAAGA+TGG 0.509798 1:+28312839 MsG0180001857.01.T01:CDS
TCATTCAATACAGATCCAAC+AGG 0.510860 1:-28310837 None:intergenic
TGCCACTTGTTGACAACTAT+GGG 0.510885 1:+28310083 MsG0180001857.01.T01:CDS
AGAAGCAGACTTTGATGGAA+TGG 0.511173 1:+28309889 MsG0180001857.01.T01:CDS
CTTGTCGCAGGCTGCTGAAG+GGG 0.512196 1:+28311395 MsG0180001857.01.T01:CDS
AAGAGGCATGAAGCTGTTCA+AGG 0.512411 1:+28312870 MsG0180001857.01.T01:CDS
GTCAAGGTGACCGGCAAGCA+AGG 0.512968 1:-28312000 None:intergenic
TTGTCACTGTCGTCAATGAA+AGG 0.513515 1:-28311562 None:intergenic
TTTCCTTGAGACAAAGGTCC+CGG 0.513530 1:+28312908 MsG0180001857.01.T01:CDS
TGGTATCCTCAGCAGGACTT+TGG 0.514326 1:+28312637 MsG0180001857.01.T01:CDS
TCTTGTCGCAGGCTGCTGAA+GGG 0.514806 1:+28311394 MsG0180001857.01.T01:CDS
GGATGAAGTTAAGCATCAAA+AGG 0.515167 1:-28310722 None:intergenic
TTGGATTCCAATGGAACTGA+AGG 0.515524 1:+28312216 MsG0180001857.01.T01:CDS
ACTTGATACTGGAGCTTGAT+CGG 0.515987 1:-28309203 None:intergenic
CTAAATTCCTCATCTTATGC+AGG 0.516492 1:+28310223 MsG0180001857.01.T01:CDS
AGAGAGAATGTCAAGGTGAC+CGG 0.517567 1:-28312009 None:intergenic
GGACAAAATCAAAGCAAAGT+TGG 0.520170 1:+28309291 MsG0180001857.01.T01:CDS
CCTTCAGATGTCTTTAGCCA+AGG 0.520212 1:-28310804 None:intergenic
AAATCAGGAGAGGCTTCATA+GGG 0.521464 1:+28308988 MsG0180001857.01.T01:CDS
CAAGAAAATTTGGATTCCAA+TGG 0.521803 1:+28312207 MsG0180001857.01.T01:CDS
CAGAAGCACTTCTATAAGCC+TGG 0.523495 1:+28309352 MsG0180001857.01.T01:CDS
TTAACCTATCTTCTCATGAT+GGG 0.525256 1:+28309446 MsG0180001857.01.T01:CDS
GGATTCGGAATCTGAAGCAC+AGG 0.525316 1:+28310390 MsG0180001857.01.T01:CDS
GGTCAGAAAGTGTGGTTGAA+AGG 0.525925 1:+28308924 MsG0180001857.01.T01:CDS
TTGAAAATAAGTAATGTGGC+TGG 0.527999 1:-28308066 None:intergenic
TGAAGAATGGGTTGTGACAC+TGG 0.528035 1:+28308958 MsG0180001857.01.T01:CDS
CTGTCCACAAATTTGTCCAA+TGG 0.528270 1:-28310768 None:intergenic
TATGCTCTTCATATAAACTT+CGG 0.528299 1:-28311747 None:intergenic
ATTACGTTACTTCTCCAAGA+AGG 0.528583 1:+28306436 None:intergenic
ATTATTGAAAATAAGTAATG+TGG 0.531522 1:-28308070 None:intergenic
GAATCCAATCCAAAAGCAAA+AGG 0.532322 1:-28310373 None:intergenic
GAACACATTCAAGTATCCCT+TGG 0.535610 1:-28309138 None:intergenic
TCAGAAGTGGCTGTATACTA+AGG 0.535657 1:+28311462 MsG0180001857.01.T01:CDS
ATCAGGAGTGAAGAAGAGAA+TGG 0.536791 1:-28306512 None:intergenic
GGAAGCAAAAGTTTCCGGTC+AGG 0.537304 1:+28308903 MsG0180001857.01.T01:CDS
ATTGAATCCATATGCAGTGT+TGG 0.537841 1:+28308117 MsG0180001857.01.T01:CDS
TGCATTTCTTCCTACAGAGA+TGG 0.539549 1:+28309033 MsG0180001857.01.T01:CDS
AGATGACAAAATGGTACGCT+GGG 0.539618 1:+28312983 MsG0180001857.01.T01:CDS
CCTTTGTCTCAAGGAAACTC+AGG 0.539809 1:-28312902 None:intergenic
CATCCACGAGATTAGAACTC+TGG 0.541207 1:-28309570 None:intergenic
GAATCTTCCTTGCTGAATGA+TGG 0.544376 1:+28312738 MsG0180001857.01.T01:CDS
ACCACACTTTCTGACCTGAC+CGG 0.545588 1:-28308917 None:intergenic
CCAAGACTGCAATGTGGACA+AGG 0.545693 1:-28308518 None:intergenic
GAATACTCAGTCAGAAGGGA+AGG 0.545905 1:-28313255 None:intergenic
TTTGGTAAGTGGTGTATCAA+CGG 0.546178 1:-28310343 None:intergenic
AGGAGGCCTGTATCCATTGA+CGG 0.546253 1:-28310473 None:intergenic
GCAAGTACACTCCTTCGTCT+CGG 0.547540 1:-28309423 None:intergenic
AATGAAGTATTTGTCAAAGC+GGG 0.547848 1:+28310036 MsG0180001857.01.T01:intron
CGTGTCACAGAAACAAGAAA+AGG 0.548446 1:+28310106 MsG0180001857.01.T01:CDS
AGCCCTGACTTCCATGGCAA+AGG 0.550141 1:-28312350 None:intergenic
CGCCCATAGTTGTCAACAAG+TGG 0.551293 1:-28310085 None:intergenic
GGAGCTGAAGTTGTTAGGAG+TGG 0.551332 1:+28310947 MsG0180001857.01.T01:CDS
ATGATTCTTACTTAAAGTGA+AGG 0.551548 1:-28310697 None:intergenic
ATGCAGAATACTCAGTCAGA+AGG 0.553212 1:-28313260 None:intergenic
CCTGAGTTTCCTTGAGACAA+AGG 0.553792 1:+28312902 MsG0180001857.01.T01:CDS
GCATTTGGAGGAGATATATG+AGG 0.554828 1:-28310309 None:intergenic
GTTGGAAGATCCACAAAGAA+AGG 0.555314 1:+28308135 MsG0180001857.01.T01:CDS
GACTATAGCTAACCGTGACC+GGG 0.555415 1:-28312926 None:intergenic
TGTCACTGTCGTCAATGAAA+GGG 0.556043 1:-28311561 None:intergenic
GGGTTTAGCCCTGACTTCCA+TGG 0.556273 1:-28312356 None:intergenic
TTGAGAAGTTTAATCATGTG+AGG 0.557570 1:+28309269 MsG0180001857.01.T01:CDS
ACAAAATGGTACGCTGGGAA+AGG 0.557636 1:+28312988 MsG0180001857.01.T01:CDS
TGAAGATAACCACTATAATG+AGG 0.558427 1:+28307984 MsG0180001857.01.T01:CDS
TATAGTTCCTGAATGGGTTG+AGG 0.559108 1:+28308544 MsG0180001857.01.T01:CDS
GCATTCATAAAGACTGAAAG+AGG 0.559501 1:-28309719 None:intergenic
TTTCCTCACAACTCATGTTG+GGG 0.560061 1:+28310275 MsG0180001857.01.T01:CDS
ATATATCTCCTCCAAATGCT+GGG 0.560375 1:+28310313 MsG0180001857.01.T01:CDS
AAACACACTTTCAGGAGTAA+TGG 0.560473 1:-28311707 None:intergenic
GCAAGGAGCATCCTTTCTCT+AGG 0.560523 1:-28311983 None:intergenic
GTGATCAATTCCGAGAGGGC+AGG 0.560858 1:-28313131 None:intergenic
GGAAAATAGTAACAATGAGA+AGG 0.560900 1:+28308862 MsG0180001857.01.T01:CDS
TGGATAATAAATGGAACCAA+GGG 0.561153 1:+28309122 MsG0180001857.01.T01:CDS
ATAGTCTATCACTGTCATCA+GGG 0.561335 1:+28312943 MsG0180001857.01.T01:CDS
GCTGAAAACCCAGCATTTGG+AGG 0.561529 1:-28310321 None:intergenic
GTAATGGTGGAGGGATCTGA+AGG 0.561652 1:-28311691 None:intergenic
TAGGATAAACAAGTATGAAG+AGG 0.563828 1:+28310593 MsG0180001857.01.T01:intron
CCTCTCGGAATTGATCACGT+TGG 0.564141 1:+28313136 MsG0180001857.01.T01:CDS
AATGGAAATTATGTTGAGCT+CGG 0.566179 1:+28310190 MsG0180001857.01.T01:CDS
TGATCAATCTTACTTTGGTG+AGG 0.568691 1:+28310905 MsG0180001857.01.T01:CDS
TGAGACAAAGGTCCCGGTCA+CGG 0.570676 1:+28312914 MsG0180001857.01.T01:CDS
AAGTGGCTGTATACTAAGGT+TGG 0.571857 1:+28311466 MsG0180001857.01.T01:CDS
TGAGAAGTTTAATCATGTGA+GGG 0.572028 1:+28309270 MsG0180001857.01.T01:CDS
ATGACGAAATTTCAATGGGA+AGG 0.572442 1:-28309246 None:intergenic
AAATCTGCTTGAATAATGAA+AGG 0.572563 1:-28309067 None:intergenic
AAGATGACAAAATGGTACGC+TGG 0.573882 1:+28312982 MsG0180001857.01.T01:CDS
GGAGATATAGATTTCCACTC+TGG 0.573951 1:-28311526 None:intergenic
TTGGATAATAAATGGAACCA+AGG 0.576105 1:+28309121 MsG0180001857.01.T01:CDS
CGAAGGACAAAGTTCTCTAT+CGG 0.576706 1:+28306598 MsG0180001857.01.T01:CDS
TTGAAAGCTGCTGTTTGACA+GGG 0.577635 1:-28308664 None:intergenic
GTCACCTCTGACCTAGAGAA+AGG 0.578260 1:+28311972 MsG0180001857.01.T01:CDS
AAAAGATGTTCATTTCCTGA+TGG 0.578740 1:+28306690 MsG0180001857.01.T01:CDS
AGGACAAAGTTCTCTATCGG+TGG 0.579395 1:+28306601 MsG0180001857.01.T01:CDS
TCCGGTCAGGTCAGAAAGTG+TGG 0.580886 1:+28308916 MsG0180001857.01.T01:CDS
TATTTCAGTGCATTTCCTTG+AGG 0.581160 1:-28313047 None:intergenic
CATCCAGAGTTCTAATCTCG+TGG 0.581803 1:+28309567 MsG0180001857.01.T01:CDS
GAAGGTCTTAGGTCTCCTGT+TGG 0.582026 1:+28310822 MsG0180001857.01.T01:CDS
AAATTAGTGACCATCTCTGT+AGG 0.582428 1:-28309043 None:intergenic
GCCTGCAAATGTGAGCAAAT+GGG 0.582565 1:+28310138 MsG0180001857.01.T01:CDS
ACATAATTTCCATTGCTCCA+AGG 0.585014 1:-28310181 None:intergenic
GCGAGATTAACTTCGTGCAA+AGG 0.587053 1:+28308795 MsG0180001857.01.T01:CDS
AAGAAAGGCAGTAGGAGCAG+TGG 0.587126 1:+28308150 MsG0180001857.01.T01:CDS
TATTGTTTCAGAGAAATATG+TGG 0.588582 1:-28313072 None:intergenic
AATTGGTTGAAGACACATGC+TGG 0.589149 1:+28311811 MsG0180001857.01.T01:CDS
GAAGATAACCACTATAATGA+GGG 0.592414 1:+28307985 MsG0180001857.01.T01:CDS
TTCTCTGAAACAATATCAGA+AGG 0.595476 1:+28313080 MsG0180001857.01.T01:CDS
AAGGAAGAACTGAAGAACCT+TGG 0.597020 1:+28311613 MsG0180001857.01.T01:CDS
TGGTGAAGATCCTCAGTCAA+AGG 0.597480 1:-28306634 None:intergenic
CTGTATTGAATGATTCCGGA+TGG 0.597662 1:+28310847 MsG0180001857.01.T01:CDS
CACACTTTCAGGAGTAATGG+TGG 0.598081 1:-28311704 None:intergenic
CTGAATTGAAACATGGCGTG+AGG 0.598775 1:+28311644 MsG0180001857.01.T01:CDS
GATACTTGAATGTGTTCCAT+CGG 0.601004 1:+28309144 MsG0180001857.01.T01:CDS
TGAGGGAGTGAAGCCAACAC+TGG 0.601399 1:+28308002 MsG0180001857.01.T01:CDS
CCATTATACATAGTCAGAAG+TGG 0.602670 1:+28311449 MsG0180001857.01.T01:CDS
CCTTGGCTAAAGACATCTGA+AGG 0.605729 1:+28310804 MsG0180001857.01.T01:CDS
CAGAGTTCTAATCTCGTGGA+TGG 0.607253 1:+28309571 MsG0180001857.01.T01:CDS
CGGAGAGATTCTTAACGGCA+TGG 0.607529 1:-28306654 None:intergenic
TACGGCAATACATGAATACA+AGG 0.607899 1:+28311594 MsG0180001857.01.T01:CDS
GGACAAAGTTCTCTATCGGT+GGG 0.608517 1:+28306602 MsG0180001857.01.T01:CDS
TGACCGGGACCTTTGTCTCA+AGG 0.609122 1:-28312911 None:intergenic
AGGAATGCAGCTACTACATG+TGG 0.611117 1:+28308882 MsG0180001857.01.T01:CDS
AGCAGCCTACTAACTTCACC+AGG 0.611524 1:-28309370 None:intergenic
ATATCTGCTTTATGTCAACA+AGG 0.613422 1:-28308577 None:intergenic
TCTTCAGGCTAGCACAAGCA+AGG 0.614577 1:-28312836 None:intergenic
TTGAGTAAATCCCGAGACGA+AGG 0.614697 1:+28309412 MsG0180001857.01.T01:CDS
GAAGTATTTGTCAAAGCGGG+AGG 0.615263 1:+28310039 MsG0180001857.01.T01:intron
ACCTATCTTCTCATGATGGG+AGG 0.616829 1:+28309449 MsG0180001857.01.T01:CDS
GATCCACAAAGAAAGGCAGT+AGG 0.617649 1:+28308142 MsG0180001857.01.T01:CDS
ATCAACATAATCATCAAGTG+AGG 0.619346 1:-28312377 None:intergenic
TGCAGAATACTCAGTCAGAA+GGG 0.620296 1:-28313259 None:intergenic
ATTAAGAACGACTTTGAAGG+AGG 0.622476 1:-28310490 None:intergenic
AAGCCTCTCCTGATTTGGGA+AGG 0.622854 1:-28308981 None:intergenic
ATAAAGCAGATATATGGTGC+TGG 0.623832 1:+28308587 MsG0180001857.01.T01:CDS
TTGTCTCCCTAGATGAGGCA+AGG 0.624139 1:-28309093 None:intergenic
TTCAACACCATCATTCAGCA+AGG 0.628441 1:-28312745 None:intergenic
AATGCATCCATAAAGGCCGA+TGG 0.628693 1:-28309160 None:intergenic
CAGAAGTTGGATGAGCCTCA+AGG 0.631503 1:+28313032 MsG0180001857.01.T01:CDS
ACTTTCAGGAGTAATGGTGG+AGG 0.632253 1:-28311701 None:intergenic
CGAAGGCCAAAGTCCTGCTG+AGG 0.632608 1:-28312643 None:intergenic
GTTATGACGAACTCCAGTGT+TGG 0.633149 1:-28308015 None:intergenic
GAATCCTAATCCTTTGACTG+AGG 0.633214 1:+28306624 MsG0180001857.01.T01:CDS
ACAGCATCAGAGATGAACCT+TGG 0.639183 1:+28310787 MsG0180001857.01.T01:CDS
TCAACATAATCATCAAGTGA+GGG 0.641694 1:-28312376 None:intergenic
GCATCCTTTCTCTAGGTCAG+AGG 0.645442 1:-28311976 None:intergenic
GATTCGGAATCTGAAGCACA+GGG 0.645968 1:+28310391 MsG0180001857.01.T01:CDS
CTTTCAGGAGTAATGGTGGA+GGG 0.646779 1:-28311700 None:intergenic
GAGAATTGTCTCCCTAGATG+AGG 0.647287 1:-28309098 None:intergenic
TGGCCTTCCCAAATCAGGAG+AGG 0.648967 1:+28308978 MsG0180001857.01.T01:CDS
AAACAACAACACATCTCTGG+AGG 0.648973 1:-28311841 None:intergenic
AACACGTTGAAGAGATACGA+AGG 0.650029 1:+28306581 MsG0180001857.01.T01:CDS
GGGGAGTGCACCTACCAAAG+AGG 0.650243 1:+28310411 MsG0180001857.01.T01:CDS
TAGTCTATCACTGTCATCAG+GGG 0.650676 1:+28312944 MsG0180001857.01.T01:CDS
TGAAGATGGAACCAGACAAG+AGG 0.652120 1:+28312853 MsG0180001857.01.T01:CDS
CAGAAGGGAAGGCAGAACTG+AGG 0.652776 1:-28313244 None:intergenic
AAATTATGTTGAGCTCGGAA+AGG 0.654327 1:+28310195 MsG0180001857.01.T01:CDS
GGAAATATATAGCTACAAAG+AGG 0.654339 1:+28310926 MsG0180001857.01.T01:CDS
CAATGAAGTATTTGTCAAAG+CGG 0.658221 1:+28310035 MsG0180001857.01.T01:intron
TATCTGCTTTATGTCAACAA+GGG 0.658452 1:-28308576 None:intergenic
ATAGGGGTAAAAGCTCATCA+GGG 0.658579 1:+28309005 MsG0180001857.01.T01:CDS
CAACGTGATCAATTCCGAGA+GGG 0.663013 1:-28313135 None:intergenic
GCACTTTGCATACCAATCAA+CGG 0.667243 1:-28309545 None:intergenic
CACTGTCAGAGAGAATGTCA+AGG 0.670616 1:-28312016 None:intergenic
TCAATTCAGTAACAACACCA+AGG 0.672552 1:-28311630 None:intergenic
AAATTGGCCTGCATAAGATG+AGG 0.673901 1:-28310230 None:intergenic
AAGCCCCAACATGAGTTGTG+AGG 0.674441 1:-28310278 None:intergenic
TGGAGTGATGTCCAGTTGTG+AGG 0.682265 1:+28310629 MsG0180001857.01.T01:CDS
TGAATACAACTGGAAACCTG+AGG 0.690265 1:+28312174 MsG0180001857.01.T01:CDS
TAGGGGTAAAAGCTCATCAG+GGG 0.692612 1:+28309006 MsG0180001857.01.T01:CDS
TATAACTTAGAAATGGACGA+AGG 0.698447 1:-28312660 None:intergenic
GTTGTTACTGAATTGAAACA+TGG 0.714865 1:+28311637 MsG0180001857.01.T01:CDS
ACTGAAGCAAATCGGTGTGG+TGG 0.715774 1:+28311276 MsG0180001857.01.T01:intron
CACACTATATCTCTCCGCAG+AGG 0.734382 1:+28308841 MsG0180001857.01.T01:CDS
ATATATCCAAGACTGCAATG+TGG 0.750302 1:-28308524 None:intergenic
AATCAGGAGAGGCTTCATAG+GGG 0.751305 1:+28308989 MsG0180001857.01.T01:CDS
CCAACGTGATCAATTCCGAG+AGG 0.762178 1:-28313136 None:intergenic
TGAACTGAAGCAAATCGGTG+TGG 0.762633 1:+28311273 MsG0180001857.01.T01:intron
ATTCGGAATCTGAAGCACAG+GGG 0.790178 1:+28310392 MsG0180001857.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCAGTTATTTATATATT+AGG + Chr1:28307829-28307848 MsG0180001857.01.T01:intron 10.0%
!!! ATTCAAATACAATTTTTTTT+AGG - Chr1:28307922-28307941 None:intergenic 10.0%
!!! TTCAAATACAATTTTTTTTA+GGG - Chr1:28307921-28307940 None:intergenic 10.0%
!! AAAAAAATCTTCAAATTACA+AGG + Chr1:28307361-28307380 MsG0180001857.01.T01:intron 15.0%
!! ATAATATTGTGAATATACAT+AGG + Chr1:28312143-28312162 MsG0180001857.01.T01:intron 15.0%
!! ATACTATTGTCAAAATATAT+AGG + Chr1:28312039-28312058 MsG0180001857.01.T01:CDS 15.0%
!! ATTATTGAAAATAAGTAATG+TGG - Chr1:28308073-28308092 None:intergenic 15.0%
!! TAAAAATTTGCATCAATAAA+AGG - Chr1:28311906-28311925 None:intergenic 15.0%
!!! AATCTAAACAATTTTTTTTC+AGG - Chr1:28307154-28307173 None:intergenic 15.0%
!!! ACTTATTTTCAATAATGAAA+AGG + Chr1:28308077-28308096 MsG0180001857.01.T01:CDS 15.0%
!!! ATCTAAACAATTTTTTTTCA+GGG - Chr1:28307153-28307172 None:intergenic 15.0%
!!! ATTTGAAGATTTTTTTGTTT+TGG - Chr1:28307357-28307376 None:intergenic 15.0%
!!! CTTATTTTCAATAATGAAAA+GGG + Chr1:28308078-28308097 MsG0180001857.01.T01:CDS 15.0%
!!! TCAAATACAATTTTTTTTAG+GGG - Chr1:28307920-28307939 None:intergenic 15.0%
!!! TTAACCCTATTTATTTTATA+CGG - Chr1:28307089-28307108 None:intergenic 15.0%
!!! TTTATTGATGCAAATTTTTA+TGG + Chr1:28311906-28311925 MsG0180001857.01.T01:intron 15.0%
!!! TTTTTCCAATAAAATTGATT+TGG - Chr1:28307580-28307599 None:intergenic 15.0%
!! AAGTAAGATTGATCAATAAA+AGG - Chr1:28310900-28310919 None:intergenic 20.0%
!! AGTAAGATTGATCAATAAAA+GGG - Chr1:28310899-28310918 None:intergenic 20.0%
!! AGTTGACAACAAAAAAATTA+TGG - Chr1:28307952-28307971 None:intergenic 20.0%
!! GTTATTTATATATTAGGTGT+TGG + Chr1:28307835-28307854 MsG0180001857.01.T01:intron 20.0%
!! TATCCATTGCTAAAAATATA+TGG - Chr1:28308476-28308495 None:intergenic 20.0%
!! TATGACATCTATAGAAAAAT+CGG + Chr1:28312681-28312700 MsG0180001857.01.T01:CDS 20.0%
!! TATGCCGTATAAAATAAATA+GGG + Chr1:28307082-28307101 MsG0180001857.01.T01:intron 20.0%
!! TATTCCATTGATAAAATATG+TGG + Chr1:28309678-28309697 MsG0180001857.01.T01:CDS 20.0%
!! TGAAATTCTCTCAAATTATA+GGG + Chr1:28307289-28307308 MsG0180001857.01.T01:intron 20.0%
!! TTATGCCGTATAAAATAAAT+AGG + Chr1:28307081-28307100 MsG0180001857.01.T01:intron 20.0%
!! TTTATATCACTTGATTAACA+AGG - Chr1:28308316-28308335 None:intergenic 20.0%
!! TTTATTGATCAATCTTACTT+TGG + Chr1:28310900-28310919 MsG0180001857.01.T01:CDS 20.0%
!!! AATAAAATTGATTTGGACTT+CGG - Chr1:28307573-28307592 None:intergenic 20.0%
!!! ATAATGTACTCAACTTTTTA+GGG + Chr1:28309509-28309528 MsG0180001857.01.T01:CDS 20.0%
!!! CAAATACAATTTTTTTTAGG+GGG - Chr1:28307919-28307938 None:intergenic 20.0%
!!! CATATAAAATGCATTGTTTT+GGG - Chr1:28311504-28311523 None:intergenic 20.0%
!!! GATATTCTTTTCAACTTAAA+AGG + Chr1:28312789-28312808 MsG0180001857.01.T01:CDS 20.0%
!!! TCTAAACAATTTTTTTTCAG+GGG - Chr1:28307152-28307171 None:intergenic 20.0%
!!! TTTTCTCTAAAAAAGATGAT+AGG - Chr1:28307044-28307063 None:intergenic 20.0%
! AAAAAAATCACCCTCAAATT+TGG + Chr1:28311012-28311031 MsG0180001857.01.T01:intron 25.0%
! AAAAATGAACTGAAGCAAAT+CGG + Chr1:28311268-28311287 MsG0180001857.01.T01:intron 25.0%
! AAAATCGATAATATGATAGG+GGG + Chr1:28307230-28307249 MsG0180001857.01.T01:intron 25.0%
! AAAATCGTAAGTTCATTGAA+AGG + Chr1:28311099-28311118 MsG0180001857.01.T01:intron 25.0%
! AAATCTGCTTGAATAATGAA+AGG - Chr1:28309070-28309089 None:intergenic 25.0%
! AAATTCTCTCAAATTATAGG+GGG + Chr1:28307291-28307310 MsG0180001857.01.T01:intron 25.0%
! AAGTAAAGAGATATTTATGC+TGG + Chr1:28312543-28312562 MsG0180001857.01.T01:intron 25.0%
! AATACTTCATTGATAAAGAG+TGG - Chr1:28310027-28310046 None:intergenic 25.0%
! ACGAAAAATCTTCAAATTAC+AGG - Chr1:28307182-28307201 None:intergenic 25.0%
! ATCAAAAAAATAACTCCACT+TGG - Chr1:28311871-28311890 None:intergenic 25.0%
! ATGATTCTTACTTAAAGTGA+AGG - Chr1:28310700-28310719 None:intergenic 25.0%
! ATGTAAAAGAAGAATAAGCA+TGG - Chr1:28306874-28306893 None:intergenic 25.0%
! ATGTTTATCCTGAAACATTT+GGG + Chr1:28312463-28312482 MsG0180001857.01.T01:CDS 25.0%
! CAAAATCGATAATATGATAG+GGG + Chr1:28307229-28307248 MsG0180001857.01.T01:intron 25.0%
! CAATTCTCTTGGATAATAAA+TGG + Chr1:28309113-28309132 MsG0180001857.01.T01:CDS 25.0%
! CGAAAAATCTTCAAATTACA+GGG - Chr1:28307181-28307200 None:intergenic 25.0%
! CTGAAATTCTCTCAAATTAT+AGG + Chr1:28307288-28307307 MsG0180001857.01.T01:intron 25.0%
! GAAATTCTCTCAAATTATAG+GGG + Chr1:28307290-28307309 MsG0180001857.01.T01:intron 25.0%
! GATGTCATATAACTTAGAAA+TGG - Chr1:28312670-28312689 None:intergenic 25.0%
! GCAAAATCGATAATATGATA+GGG + Chr1:28307228-28307247 MsG0180001857.01.T01:intron 25.0%
! GTAAGAAACAAAAGAATTTC+TGG - Chr1:28308698-28308717 None:intergenic 25.0%
! GTGATTGATCATAAATTCTA+TGG + Chr1:28311225-28311244 MsG0180001857.01.T01:intron 25.0%
! GTTTATCTTATAATAGAGAC+CGG - Chr1:28307678-28307697 None:intergenic 25.0%
! TAAAAGAGATGAAACAGAAA+AGG - Chr1:28306739-28306758 None:intergenic 25.0%
! TACAAAGAAAGATGACAAAA+TGG + Chr1:28312974-28312993 MsG0180001857.01.T01:CDS 25.0%
! TAGAATTTATGATCAATCAC+AGG - Chr1:28311225-28311244 None:intergenic 25.0%
! TATGCTCTTCATATAAACTT+CGG - Chr1:28311750-28311769 None:intergenic 25.0%
! TATTGTTTCAGAGAAATATG+TGG - Chr1:28313075-28313094 None:intergenic 25.0%
! TCAAATGACGAAATTTCAAT+GGG - Chr1:28309253-28309272 None:intergenic 25.0%
! TCTTAAAATGTTGTGTACTT+TGG + Chr1:28308218-28308237 MsG0180001857.01.T01:intron 25.0%
! TGAAGATATTGAATTTCTGA+TGG + Chr1:28313181-28313200 MsG0180001857.01.T01:CDS 25.0%
! TGCAAAATCGATAATATGAT+AGG + Chr1:28307227-28307246 MsG0180001857.01.T01:intron 25.0%
! TTCTTGAAGATATCTATGAT+AGG + Chr1:28312309-28312328 MsG0180001857.01.T01:intron 25.0%
! TTTAAACCAAAAAGCTTATC+AGG - Chr1:28312281-28312300 None:intergenic 25.0%
!! AAACACATTAGCAATTTTTG+AGG - Chr1:28307630-28307649 None:intergenic 25.0%
!! AATGAACTTACGATTTTACT+AGG - Chr1:28311096-28311115 None:intergenic 25.0%
!! AGCTGAATGTTTTACTTATT+TGG + Chr1:28308286-28308305 MsG0180001857.01.T01:intron 25.0%
!! ATGAACTTACGATTTTACTA+GGG - Chr1:28311095-28311114 None:intergenic 25.0%
!! CCAAAACAATGCATTTTATA+TGG + Chr1:28311502-28311521 MsG0180001857.01.T01:CDS 25.0%
!! CCATATAAAATGCATTGTTT+TGG - Chr1:28311505-28311524 None:intergenic 25.0%
!! GAAGTCCAAATCAATTTTAT+TGG + Chr1:28307572-28307591 MsG0180001857.01.T01:intron 25.0%
!! GATAATGTACTCAACTTTTT+AGG + Chr1:28309508-28309527 MsG0180001857.01.T01:CDS 25.0%
!! TAATGTACTCAACTTTTTAG+GGG + Chr1:28309510-28309529 MsG0180001857.01.T01:CDS 25.0%
!! TTGATGATTATGTTGATCTT+TGG + Chr1:28312383-28312402 MsG0180001857.01.T01:CDS 25.0%
!! TTTAAGTGCTTGATAACAAT+TGG - Chr1:28310995-28311014 None:intergenic 25.0%
!!! ATTTTTTTGATCCAACTGAT+GGG + Chr1:28311880-28311899 MsG0180001857.01.T01:intron 25.0%
!!! CAACCATATATTTTTAGCAA+TGG + Chr1:28308470-28308489 MsG0180001857.01.T01:CDS 25.0%
!!! CATATGGATTCAATGTTTTT+TGG - Chr1:28308111-28308130 None:intergenic 25.0%
!!! TATTTTTTTGATCCAACTGA+TGG + Chr1:28311879-28311898 MsG0180001857.01.T01:intron 25.0%
!!! TTTTTGTCTTGTTTTTGTGT+AGG + Chr1:28306828-28306847 MsG0180001857.01.T01:intron 25.0%
!!! TTTTTTGTTTTGGACTTTCA+TGG - Chr1:28307347-28307366 None:intergenic 25.0%
AAAAGATGTTCATTTCCTGA+TGG + Chr1:28306690-28306709 MsG0180001857.01.T01:CDS 30.0%
AAACTGGACTTCAAGATTTA+AGG + Chr1:28309639-28309658 MsG0180001857.01.T01:CDS 30.0%
AAATGTATAAAAATGGCAGC+TGG + Chr1:28310440-28310459 MsG0180001857.01.T01:CDS 30.0%
AACTGGACTTCAAGATTTAA+GGG + Chr1:28309640-28309659 MsG0180001857.01.T01:CDS 30.0%
AATGGAAATTATGTTGAGCT+CGG + Chr1:28310190-28310209 MsG0180001857.01.T01:CDS 30.0%
AGAGAAGTTAATGAAAATCC+TGG + Chr1:28308740-28308759 MsG0180001857.01.T01:CDS 30.0%
ATAAAATATGTGGCTTCTGA+TGG + Chr1:28309688-28309707 MsG0180001857.01.T01:CDS 30.0%
ATAAAGCTGCCAAGAAAATT+TGG + Chr1:28312197-28312216 MsG0180001857.01.T01:CDS 30.0%
ATAATGGTCGAAAAATCAGA+AGG - Chr1:28311436-28311455 None:intergenic 30.0%
ATACGGCATAATAAGATGAT+AGG - Chr1:28307072-28307091 None:intergenic 30.0%
ATATCTGCTTTATGTCAACA+AGG - Chr1:28308580-28308599 None:intergenic 30.0%
ATCAACATAATCATCAAGTG+AGG - Chr1:28312380-28312399 None:intergenic 30.0%
ATGACAAAAGCTGTAAATTC+TGG + Chr1:28312440-28312459 MsG0180001857.01.T01:CDS 30.0%
ATTTATGATCAATCACAGGA+AGG - Chr1:28311221-28311240 None:intergenic 30.0%
CAAAAAATGAGCATATGCAA+TGG - Chr1:28310002-28310021 None:intergenic 30.0%
CAAGAAAATTTGGATTCCAA+TGG + Chr1:28312207-28312226 MsG0180001857.01.T01:CDS 30.0%
CAATTGTCTTAGTGTTTGTT+TGG + Chr1:28307389-28307408 MsG0180001857.01.T01:intron 30.0%
CATTAACTTCTCTTACAGAA+AGG - Chr1:28308733-28308752 None:intergenic 30.0%
CATTGACAAAATCTCTCTTA+TGG + Chr1:28308401-28308420 MsG0180001857.01.T01:intron 30.0%
CTCAAATGACGAAATTTCAA+TGG - Chr1:28309254-28309273 None:intergenic 30.0%
CTTTCTGAACTTATCATCAA+TGG - Chr1:28311779-28311798 None:intergenic 30.0%
GAAGATAACCACTATAATGA+GGG + Chr1:28307985-28308004 MsG0180001857.01.T01:CDS 30.0%
GAAGGAAAATTCAGACATTT+AGG - Chr1:28311676-28311695 None:intergenic 30.0%
GATGTTTATCCTGAAACATT+TGG + Chr1:28312462-28312481 MsG0180001857.01.T01:CDS 30.0%
GGAAAATAGTAACAATGAGA+AGG + Chr1:28308862-28308881 MsG0180001857.01.T01:CDS 30.0%
GGAAATATATAGCTACAAAG+AGG + Chr1:28310926-28310945 MsG0180001857.01.T01:CDS 30.0%
GTTGACATAAAGCAGATATA+TGG + Chr1:28308581-28308600 MsG0180001857.01.T01:CDS 30.0%
GTTGTTACTGAATTGAAACA+TGG + Chr1:28311637-28311656 MsG0180001857.01.T01:CDS 30.0%
GTTTGATTAAGCTCATTCTT+GGG + Chr1:28312811-28312830 MsG0180001857.01.T01:CDS 30.0%
TAATGCAATGCATCAAATCT+TGG + Chr1:28311065-28311084 MsG0180001857.01.T01:intron 30.0%
TAGGATAAACAAGTATGAAG+AGG + Chr1:28310593-28310612 MsG0180001857.01.T01:intron 30.0%
TATAACTTAGAAATGGACGA+AGG - Chr1:28312663-28312682 None:intergenic 30.0%
TATCTGCTTTATGTCAACAA+GGG - Chr1:28308579-28308598 None:intergenic 30.0%
TATGGTTGAATTTCAGGAAT+CGG + Chr1:28308419-28308438 MsG0180001857.01.T01:intron 30.0%
TCAACATAATCATCAAGTGA+GGG - Chr1:28312379-28312398 None:intergenic 30.0%
TCATACAAGAAACATTCACT+TGG - Chr1:28311162-28311181 None:intergenic 30.0%
TGAAGATAACCACTATAATG+AGG + Chr1:28307984-28308003 MsG0180001857.01.T01:CDS 30.0%
TGAGAAGTTTAATCATGTGA+GGG + Chr1:28309270-28309289 MsG0180001857.01.T01:CDS 30.0%
TGAGGAAATTAATAAGCTTC+CGG - Chr1:28310263-28310282 None:intergenic 30.0%
TGGATAATAAATGGAACCAA+GGG + Chr1:28309122-28309141 MsG0180001857.01.T01:CDS 30.0%
TGGATATATAGTTCCTGAAT+GGG + Chr1:28308538-28308557 MsG0180001857.01.T01:CDS 30.0%
TGTTCCTATTGAGACATATA+CGG + Chr1:28309327-28309346 MsG0180001857.01.T01:CDS 30.0%
TTAACCTATCTTCTCATGAT+GGG + Chr1:28309446-28309465 MsG0180001857.01.T01:CDS 30.0%
TTAACTTCATCCAATATCTC+AGG + Chr1:28310733-28310752 MsG0180001857.01.T01:CDS 30.0%
TTAGCAATGGATATCAGATA+AGG + Chr1:28308483-28308502 MsG0180001857.01.T01:CDS 30.0%
TTGAAAATAAGTAATGTGGC+TGG - Chr1:28308069-28308088 None:intergenic 30.0%
TTGAGAAGTTTAATCATGTG+AGG + Chr1:28309269-28309288 MsG0180001857.01.T01:CDS 30.0%
TTGCACAATCATCTTCAATT+TGG - Chr1:28308379-28308398 None:intergenic 30.0%
TTGGATAATAAATGGAACCA+AGG + Chr1:28309121-28309140 MsG0180001857.01.T01:CDS 30.0%
TTGGATATATAGTTCCTGAA+TGG + Chr1:28308537-28308556 MsG0180001857.01.T01:CDS 30.0%
! AACATCTTTTGCATAAAGCT+CGG - Chr1:28306680-28306699 None:intergenic 30.0%
! AAGAAAATGCCTTTTGCTTT+TGG + Chr1:28310364-28310383 MsG0180001857.01.T01:CDS 30.0%
! AATGAAGTATTTGTCAAAGC+GGG + Chr1:28310036-28310055 MsG0180001857.01.T01:intron 30.0%
! AGAAATGACATGACATTTTC+TGG - Chr1:28311373-28311392 None:intergenic 30.0%
! ATTGTTACTATTTTCCTCTG+CGG - Chr1:28308858-28308877 None:intergenic 30.0%
! CAATGAAGTATTTGTCAAAG+CGG + Chr1:28310035-28310054 MsG0180001857.01.T01:intron 30.0%
! CAGTGACAAATTTTATGGTA+CGG + Chr1:28311576-28311595 MsG0180001857.01.T01:CDS 30.0%
! CATTGGAATCCAAATTTTCT+TGG - Chr1:28312209-28312228 None:intergenic 30.0%
! CTGTAATGAAATGAAGTATC+AGG - Chr1:28306532-28306551 None:intergenic 30.0%
! CTTCAATTTGGCTACTTTAA+TGG - Chr1:28308367-28308386 None:intergenic 30.0%
! GAAAATTTTGCAAAGTGGTT+CGG + Chr1:28310528-28310547 MsG0180001857.01.T01:intron 30.0%
! GAAGCCACATATTTTATCAA+TGG - Chr1:28309685-28309704 None:intergenic 30.0%
! TACTGTTTGTTGCTAAAAAC+TGG + Chr1:28309623-28309642 MsG0180001857.01.T01:CDS 30.0%
! TGCATTTTGGATGTATTCAA+TGG + Chr1:28311195-28311214 MsG0180001857.01.T01:intron 30.0%
!! ACTTGATTGTTTCTAATCCT+TGG + Chr1:28310164-28310183 MsG0180001857.01.T01:CDS 30.0%
!! ATGTTGATCTTTGGAATGAA+TGG + Chr1:28312392-28312411 MsG0180001857.01.T01:CDS 30.0%
!! ATTGTAGCTTTTGACTACAA+AGG - Chr1:28307525-28307544 None:intergenic 30.0%
!! TGTTGATCTTTGGAATGAAT+GGG + Chr1:28312393-28312412 MsG0180001857.01.T01:CDS 30.0%
!! TGTTTTGAATGCATCCATAA+AGG - Chr1:28309170-28309189 None:intergenic 30.0%
!! TTCTCTGAAACAATATCAGA+AGG + Chr1:28313080-28313099 MsG0180001857.01.T01:CDS 30.0%
!! TTTTGCTTTTGGATTGGATT+CGG + Chr1:28310375-28310394 MsG0180001857.01.T01:CDS 30.0%
!!! AAAGCAAAAGGCATTTTCTT+TGG - Chr1:28310364-28310383 None:intergenic 30.0%
!!! ATTTTTTTTCAGGGGTAAAC+CGG - Chr1:28307144-28307163 None:intergenic 30.0%
!!! TTAGTGTTTGTTTGGTTTTG+TGG + Chr1:28307397-28307416 MsG0180001857.01.T01:intron 30.0%
!!! TTATTTTAAAGAGACTGCAG+AGG - Chr1:28309968-28309987 None:intergenic 30.0%
!!! TTCTGGAAAGATGCTATTTT+AGG - Chr1:28311933-28311952 None:intergenic 30.0%
AAACACACTTTCAGGAGTAA+TGG - Chr1:28311710-28311729 None:intergenic 35.0%
AAATATCCACGATATGACAG+GGG + Chr1:28307260-28307279 MsG0180001857.01.T01:intron 35.0%
AAATTAGTGACCATCTCTGT+AGG - Chr1:28309046-28309065 None:intergenic 35.0%
AAATTATGTTGAGCTCGGAA+AGG + Chr1:28310195-28310214 MsG0180001857.01.T01:CDS 35.0%
AAGAAGAATAAGCATGGTCT+TGG - Chr1:28306868-28306887 None:intergenic 35.0%
AATTTCCTCACAACTCATGT+TGG + Chr1:28310273-28310292 MsG0180001857.01.T01:CDS 35.0%
ACATAATTTCCATTGCTCCA+AGG - Chr1:28310184-28310203 None:intergenic 35.0%
ACTGAGTTTGACAACAAAAG+TGG - Chr1:28307864-28307883 None:intergenic 35.0%
AGAGAATGGTTTACTTCTCT+TGG - Chr1:28306501-28306520 None:intergenic 35.0%
AGCAAAGAAAACACACTTTC+AGG - Chr1:28311718-28311737 None:intergenic 35.0%
AGTGGTTACATAGGAGAAAA+AGG + Chr1:28308168-28308187 MsG0180001857.01.T01:CDS 35.0%
ATAAAGCAGATATATGGTGC+TGG + Chr1:28308587-28308606 MsG0180001857.01.T01:CDS 35.0%
ATAGTCTATCACTGTCATCA+GGG + Chr1:28312943-28312962 MsG0180001857.01.T01:CDS 35.0%
ATATATCCAAGACTGCAATG+TGG - Chr1:28308527-28308546 None:intergenic 35.0%
ATATATCTCCTCCAAATGCT+GGG + Chr1:28310313-28310332 MsG0180001857.01.T01:CDS 35.0%
ATCAAACAACAACACATCTC+TGG - Chr1:28311847-28311866 None:intergenic 35.0%
ATGAAAGGGAGACAAGTAAT+CGG - Chr1:28311550-28311569 None:intergenic 35.0%
ATGACGAAATTTCAATGGGA+AGG - Chr1:28309249-28309268 None:intergenic 35.0%
ATGTGTCTTCAACCAATTTC+TGG - Chr1:28311809-28311828 None:intergenic 35.0%
ATTACGCTTGATTGTGAAGT+AGG + Chr1:28308336-28308355 MsG0180001857.01.T01:intron 35.0%
ATTATCAAAAGAACAGCCTC+AGG - Chr1:28311049-28311068 None:intergenic 35.0%
ATTGAATCCATATGCAGTGT+TGG + Chr1:28308117-28308136 MsG0180001857.01.T01:CDS 35.0%
ATTTCCTCACAACTCATGTT+GGG + Chr1:28310274-28310293 MsG0180001857.01.T01:CDS 35.0%
CAAAAAGCTTCTTCAGATGA+AGG - Chr1:28312597-28312616 None:intergenic 35.0%
CAAAGTCAGAAAGAGAGTTA+AGG - Chr1:28312123-28312142 None:intergenic 35.0%
CAACTTCTGGATGAAAAACT+TGG - Chr1:28313021-28313040 None:intergenic 35.0%
CAATTGCATTGAGTTCTTTC+TGG - Chr1:28311950-28311969 None:intergenic 35.0%
CAGAGAAGAAACTTTCTAAG+AGG + Chr1:28312494-28312513 MsG0180001857.01.T01:CDS 35.0%
CCACTTCTGACTATGTATAA+TGG - Chr1:28311452-28311471 None:intergenic 35.0%
CCATTATACATAGTCAGAAG+TGG + Chr1:28311449-28311468 MsG0180001857.01.T01:CDS 35.0%
CCTGTAATATTAGCGATTTC+CGG + Chr1:28307122-28307141 MsG0180001857.01.T01:intron 35.0%
CGAATTAAGAACGACTTTGA+AGG - Chr1:28310496-28310515 None:intergenic 35.0%
CGGAAATCGCTAATATTACA+GGG - Chr1:28307124-28307143 None:intergenic 35.0%
CTAAATTCCTCATCTTATGC+AGG + Chr1:28310223-28310242 MsG0180001857.01.T01:CDS 35.0%
CTCTCTTATGGTTGAATTTC+AGG + Chr1:28308413-28308432 MsG0180001857.01.T01:intron 35.0%
CTGCATAAGATGAGGAATTT+AGG - Chr1:28310225-28310244 None:intergenic 35.0%
CTGTCATATCGTGGATATTT+CGG - Chr1:28307260-28307279 None:intergenic 35.0%
CTTAACCTATCTTCTCATGA+TGG + Chr1:28309445-28309464 MsG0180001857.01.T01:CDS 35.0%
GAAAGAGATTGTCCAGAAAT+TGG + Chr1:28311794-28311813 MsG0180001857.01.T01:CDS 35.0%
GAAATATCCACGATATGACA+GGG + Chr1:28307259-28307278 MsG0180001857.01.T01:intron 35.0%
GAAATCGCTAATATTACAGG+GGG - Chr1:28307122-28307141 None:intergenic 35.0%
GAAGAGGAGTTGAAAACAAT+TGG + Chr1:28310609-28310628 MsG0180001857.01.T01:CDS 35.0%
GAATCCAATCCAAAAGCAAA+AGG - Chr1:28310376-28310395 None:intergenic 35.0%
GAGAAAAGTAATACTCTCTC+CGG + Chr1:28307656-28307675 MsG0180001857.01.T01:intron 35.0%
GAGAACAGATGTTGAAGAAT+GGG + Chr1:28308946-28308965 MsG0180001857.01.T01:CDS 35.0%
GATACTTGAATGTGTTCCAT+CGG + Chr1:28309144-28309163 MsG0180001857.01.T01:CDS 35.0%
GCATTCATAAAGACTGAAAG+AGG - Chr1:28309722-28309741 None:intergenic 35.0%
GGAAATCGCTAATATTACAG+GGG - Chr1:28307123-28307142 None:intergenic 35.0%
GGACAAAATCAAAGCAAAGT+TGG + Chr1:28309291-28309310 MsG0180001857.01.T01:CDS 35.0%
GGATCTGTATTGAATGATTC+CGG + Chr1:28310843-28310862 MsG0180001857.01.T01:CDS 35.0%
GGATGAAGTTAAGCATCAAA+AGG - Chr1:28310725-28310744 None:intergenic 35.0%
GGTTTGATTAAGCTCATTCT+TGG + Chr1:28312810-28312829 MsG0180001857.01.T01:CDS 35.0%
GTACTTGAATTAGTTCCATC+AGG - Chr1:28306708-28306727 None:intergenic 35.0%
TAAAGACATCTGAAGGTCTT+AGG + Chr1:28310811-28310830 MsG0180001857.01.T01:CDS 35.0%
TACGGCAATACATGAATACA+AGG + Chr1:28311594-28311613 MsG0180001857.01.T01:CDS 35.0%
TATAGTCTATCACTGTCATC+AGG + Chr1:28312942-28312961 MsG0180001857.01.T01:CDS 35.0%
TATTTCAGTGCATTTCCTTG+AGG - Chr1:28313050-28313069 None:intergenic 35.0%
TCAATTCAGTAACAACACCA+AGG - Chr1:28311633-28311652 None:intergenic 35.0%
TCATTCAATACAGATCCAAC+AGG - Chr1:28310840-28310859 None:intergenic 35.0%
TCTTTACTTCCTGTTGTTAC+AGG - Chr1:28312532-28312551 None:intergenic 35.0%
TGATCAATCTTACTTTGGTG+AGG + Chr1:28310905-28310924 MsG0180001857.01.T01:CDS 35.0%
TGTCCACAAATTTGTCCAAT+GGG - Chr1:28310770-28310789 None:intergenic 35.0%
TTAAACAAGTGACCGTTGAT+TGG + Chr1:28309533-28309552 MsG0180001857.01.T01:CDS 35.0%
TTACAGTTGCAGAAGATCAA+TGG + Chr1:28306546-28306565 MsG0180001857.01.T01:exon 35.0%
TTACGCTTGATTGTGAAGTA+GGG + Chr1:28308337-28308356 MsG0180001857.01.T01:intron 35.0%
TTCCATGGCAAAGGTAAAAA+GGG - Chr1:28312344-28312363 None:intergenic 35.0%
TTCTTAATTCGCTCACCATT+GGG + Chr1:28310505-28310524 MsG0180001857.01.T01:intron 35.0%
TTCTTCAGATGAAGGTTATC+AGG - Chr1:28312589-28312608 None:intergenic 35.0%
TTGACCTTATCTTGCTTCAA+GGG - Chr1:28308644-28308663 None:intergenic 35.0%
TTTGGTAAGTGGTGTATCAA+CGG - Chr1:28310346-28310365 None:intergenic 35.0%
! AACAAGGAATTTTCATGTGC+AGG + Chr1:28309813-28309832 MsG0180001857.01.T01:intron 35.0%
! AAGATGGACTTGTGCTAATA+TGG + Chr1:28308245-28308264 MsG0180001857.01.T01:intron 35.0%
! AATTTTCATGTGCAGGAAAC+CGG + Chr1:28309820-28309839 MsG0180001857.01.T01:intron 35.0%
! ACATGACCTGATAAGCTTTT+TGG + Chr1:28312272-28312291 MsG0180001857.01.T01:intron 35.0%
! ATCTCTTCAACGTGTTCTTT+TGG - Chr1:28306577-28306596 None:intergenic 35.0%
! ATTAAGAACGACTTTGAAGG+AGG - Chr1:28310493-28310512 None:intergenic 35.0%
! CAAGTTTTTCATCCAGAAGT+TGG + Chr1:28313019-28313038 MsG0180001857.01.T01:CDS 35.0%
! CTTTGCAAAATTTTCCCCAA+TGG - Chr1:28310523-28310542 None:intergenic 35.0%
! GAACTTTCAGATTTTCAGTG+AGG + Chr1:28313211-28313230 MsG0180001857.01.T01:CDS 35.0%
! GACGACAGTGACAAATTTTA+TGG + Chr1:28311571-28311590 MsG0180001857.01.T01:CDS 35.0%
! GAGGAAGCATGTAAATTCAT+TGG + Chr1:28310648-28310667 MsG0180001857.01.T01:CDS 35.0%
! TATTTCTGCCCAAATGTTTC+AGG - Chr1:28312474-28312493 None:intergenic 35.0%
! TGCTTTCTGGCATAAAAAAC+CGG - Chr1:28309842-28309861 None:intergenic 35.0%
! TTGGGGAAAATTTTGCAAAG+TGG + Chr1:28310523-28310542 MsG0180001857.01.T01:intron 35.0%
!! AAGGCATTTTCTTTGGTAAG+TGG - Chr1:28310357-28310376 None:intergenic 35.0%
!! AATGCCTTTTGCTTTTGGAT+TGG + Chr1:28310369-28310388 MsG0180001857.01.T01:CDS 35.0%
!! GCATTCAAAACACTTGTTGT+AGG + Chr1:28309178-28309197 MsG0180001857.01.T01:CDS 35.0%
!! TGAAAGTGTGTTTTCTTTGC+TGG + Chr1:28311717-28311736 MsG0180001857.01.T01:CDS 35.0%
!! TGTTGTTGTTTGATTCCAAG+TGG + Chr1:28311853-28311872 MsG0180001857.01.T01:intron 35.0%
AAACAACAACACATCTCTGG+AGG - Chr1:28311844-28311863 None:intergenic 40.0%
AAAGAGGAGCTGAAGTTGTT+AGG + Chr1:28310942-28310961 MsG0180001857.01.T01:CDS 40.0%
AAATCAGGAGAGGCTTCATA+GGG + Chr1:28308988-28309007 MsG0180001857.01.T01:CDS 40.0%
AACACGTTGAAGAGATACGA+AGG + Chr1:28306581-28306600 MsG0180001857.01.T01:CDS 40.0%
AAGATGACAAAATGGTACGC+TGG + Chr1:28312982-28313001 MsG0180001857.01.T01:CDS 40.0%
AAGCTGCTTGAAGACAAACA+TGG + Chr1:28311125-28311144 MsG0180001857.01.T01:intron 40.0%
AAGGAAGAACTGAAGAACCT+TGG + Chr1:28311613-28311632 MsG0180001857.01.T01:CDS 40.0%
AAGTGGCTGTATACTAAGGT+TGG + Chr1:28311466-28311485 MsG0180001857.01.T01:CDS 40.0%
AAGTTACCGTCAATGGATAC+AGG + Chr1:28310467-28310486 MsG0180001857.01.T01:CDS 40.0%
AAGTTGTTAGGAGTGGTAGT+TGG + Chr1:28310954-28310973 MsG0180001857.01.T01:intron 40.0%
AATATCCACGATATGACAGG+GGG + Chr1:28307261-28307280 MsG0180001857.01.T01:intron 40.0%
AATTGGTTGAAGACACATGC+TGG + Chr1:28311811-28311830 MsG0180001857.01.T01:CDS 40.0%
ACTTGATACTGGAGCTTGAT+CGG - Chr1:28309206-28309225 None:intergenic 40.0%
AGAAAGAGAGTTAAGGTTGC+TGG - Chr1:28312116-28312135 None:intergenic 40.0%
AGAAGCAGACTTTGATGGAA+TGG + Chr1:28309889-28309908 MsG0180001857.01.T01:CDS 40.0%
AGATCCTCAGTCAAAGGATT+AGG - Chr1:28306631-28306650 None:intergenic 40.0%
AGATGACAAAATGGTACGCT+GGG + Chr1:28312983-28313002 MsG0180001857.01.T01:CDS 40.0%
AGCAAACTACCTGTAACAAC+AGG + Chr1:28312520-28312539 MsG0180001857.01.T01:CDS 40.0%
AGCTGCTTGAAGACAAACAT+GGG + Chr1:28311126-28311145 MsG0180001857.01.T01:intron 40.0%
ATAAGCCTGGTGAAGTTAGT+AGG + Chr1:28309365-28309384 MsG0180001857.01.T01:CDS 40.0%
ATACGAGCCAAACTTGATAC+TGG - Chr1:28309217-28309236 None:intergenic 40.0%
ATAGAAGCTCTCGTCAATCA+GGG - Chr1:28310569-28310588 None:intergenic 40.0%
ATAGGGGTAAAAGCTCATCA+GGG + Chr1:28309005-28309024 MsG0180001857.01.T01:CDS 40.0%
ATCAGGAGTGAAGAAGAGAA+TGG - Chr1:28306515-28306534 None:intergenic 40.0%
ATCTAGGGAGACAATTCTCT+TGG + Chr1:28309102-28309121 MsG0180001857.01.T01:CDS 40.0%
ATTCCATCAAAGTCTGCTTC+TGG - Chr1:28309890-28309909 None:intergenic 40.0%
CATATATCTCCTCCAAATGC+TGG + Chr1:28310312-28310331 MsG0180001857.01.T01:CDS 40.0%
CATGTGGAAGCAAAAGTTTC+CGG + Chr1:28308898-28308917 MsG0180001857.01.T01:CDS 40.0%
CCGGAAATCGCTAATATTAC+AGG - Chr1:28307125-28307144 None:intergenic 40.0%
CGAAATATCCACGATATGAC+AGG + Chr1:28307258-28307277 MsG0180001857.01.T01:intron 40.0%
CGAAGGACAAAGTTCTCTAT+CGG + Chr1:28306598-28306617 MsG0180001857.01.T01:CDS 40.0%
CGTGTCACAGAAACAAGAAA+AGG + Chr1:28310106-28310125 MsG0180001857.01.T01:CDS 40.0%
CTGTATTGAATGATTCCGGA+TGG + Chr1:28310847-28310866 MsG0180001857.01.T01:CDS 40.0%
CTGTCCACAAATTTGTCCAA+TGG - Chr1:28310771-28310790 None:intergenic 40.0%
CTTCCATGGCAAAGGTAAAA+AGG - Chr1:28312345-28312364 None:intergenic 40.0%
GAACACATTCAAGTATCCCT+TGG - Chr1:28309141-28309160 None:intergenic 40.0%
GAAGACTTCTCCTGAGATAT+TGG - Chr1:28310746-28310765 None:intergenic 40.0%
GAATCCTAATCCTTTGACTG+AGG + Chr1:28306624-28306643 MsG0180001857.01.T01:CDS 40.0%
GAATCTTCCTTGCTGAATGA+TGG + Chr1:28312738-28312757 MsG0180001857.01.T01:CDS 40.0%
GCAAAAGGCTATCTTGAGAT+TGG + Chr1:28309863-28309882 MsG0180001857.01.T01:CDS 40.0%
GCACTTTGCATACCAATCAA+CGG - Chr1:28309548-28309567 None:intergenic 40.0%
GCATTTGGAGGAGATATATG+AGG - Chr1:28310312-28310331 None:intergenic 40.0%
GGAGAACAGATGTTGAAGAA+TGG + Chr1:28308945-28308964 MsG0180001857.01.T01:CDS 40.0%
GGAGATATAGATTTCCACTC+TGG - Chr1:28311529-28311548 None:intergenic 40.0%
GGCAAGACAATTGTTGTAGT+TGG - Chr1:28308623-28308642 None:intergenic 40.0%
GGTACTTGTCTGAATACAAC+TGG + Chr1:28312164-28312183 MsG0180001857.01.T01:intron 40.0%
GTCAAAGAGGCCAAATTTGA+GGG - Chr1:28311025-28311044 None:intergenic 40.0%
GTTCTTAATTCGCTCACCAT+TGG + Chr1:28310504-28310523 MsG0180001857.01.T01:intron 40.0%
GTTGACCTTATCTTGCTTCA+AGG - Chr1:28308645-28308664 None:intergenic 40.0%
GTTGGAAGATCCACAAAGAA+AGG + Chr1:28308135-28308154 MsG0180001857.01.T01:CDS 40.0%
GTTTCTAATCCTTGGAGCAA+TGG + Chr1:28310172-28310191 MsG0180001857.01.T01:CDS 40.0%
TAGTCTATCACTGTCATCAG+GGG + Chr1:28312944-28312963 MsG0180001857.01.T01:CDS 40.0%
TATGAAGCCTCTCCTGATTT+GGG - Chr1:28308988-28309007 None:intergenic 40.0%
TCAAGCTCCAGTATCAAGTT+TGG + Chr1:28309207-28309226 MsG0180001857.01.T01:CDS 40.0%
TCAATAAAAGGCCCATCAGT+TGG - Chr1:28311894-28311913 None:intergenic 40.0%
TCAGAAGTGGCTGTATACTA+AGG + Chr1:28311462-28311481 MsG0180001857.01.T01:CDS 40.0%
TCTCCCATTGGACAAATTTG+TGG + Chr1:28310764-28310783 MsG0180001857.01.T01:CDS 40.0%
TCTGATGACATTACTGCTAC+TGG + Chr1:28308039-28308058 MsG0180001857.01.T01:CDS 40.0%
TCTTAATTCGCTCACCATTG+GGG + Chr1:28310506-28310525 MsG0180001857.01.T01:intron 40.0%
TCTTATGCAGGCCAATTTAC+AGG + Chr1:28310235-28310254 MsG0180001857.01.T01:CDS 40.0%
TGAATACAACTGGAAACCTG+AGG + Chr1:28312174-28312193 MsG0180001857.01.T01:CDS 40.0%
TGATTGACGAGAGCTTCTAT+GGG + Chr1:28310569-28310588 MsG0180001857.01.T01:intron 40.0%
TGCATTTCTTCCTACAGAGA+TGG + Chr1:28309033-28309052 MsG0180001857.01.T01:CDS 40.0%
TGCTCCGTATATGTCTCAAT+AGG - Chr1:28309334-28309353 None:intergenic 40.0%
TGCTTCTCTCTTCAAACAGA+AGG + Chr1:28311327-28311346 MsG0180001857.01.T01:CDS 40.0%
TGCTTTATGTCAACAAGGGT+TGG - Chr1:28308575-28308594 None:intergenic 40.0%
TGGCTTAAAGTTACCGTCAA+TGG + Chr1:28310460-28310479 MsG0180001857.01.T01:CDS 40.0%
TGTCAAAGAGGCCAAATTTG+AGG - Chr1:28311026-28311045 None:intergenic 40.0%
TGTCACTGTCGTCAATGAAA+GGG - Chr1:28311564-28311583 None:intergenic 40.0%
TGTGTACTTTGGACTCAAGA+TGG + Chr1:28308229-28308248 MsG0180001857.01.T01:intron 40.0%
TTCAACACCATCATTCAGCA+AGG - Chr1:28312748-28312767 None:intergenic 40.0%
TTCCATCAAAGTCTGCTTCT+GGG - Chr1:28309889-28309908 None:intergenic 40.0%
TTGGATTCCAATGGAACTGA+AGG + Chr1:28312216-28312235 MsG0180001857.01.T01:CDS 40.0%
TTGTCACTGTCGTCAATGAA+AGG - Chr1:28311565-28311584 None:intergenic 40.0%
TTTACATGCTTCCTCACAAC+TGG - Chr1:28310643-28310662 None:intergenic 40.0%
TTTCCTCACAACTCATGTTG+GGG + Chr1:28310275-28310294 MsG0180001857.01.T01:CDS 40.0%
TTTCTTGTATGACCAGACGT+GGG + Chr1:28311170-28311189 MsG0180001857.01.T01:intron 40.0%
! AAATTGGCCTGCATAAGATG+AGG - Chr1:28310233-28310252 None:intergenic 40.0%
! AGCAGGAGAAGATTTTTGTG+TGG + Chr1:28312617-28312636 MsG0180001857.01.T01:intron 40.0%
! ATCTTTTGCATAAAGCTCGG+CGG - Chr1:28306677-28306696 None:intergenic 40.0%
! ATGCCACTTGTTGACAACTA+TGG + Chr1:28310082-28310101 MsG0180001857.01.T01:CDS 40.0%
! ATTTTGTCCTTGCCTCATCT+AGG + Chr1:28309086-28309105 MsG0180001857.01.T01:CDS 40.0%
! GCATTTTATATGGTCCAGAG+TGG + Chr1:28311512-28311531 MsG0180001857.01.T01:CDS 40.0%
! GCTGAATGATGGTGTTGAAA+TGG + Chr1:28312749-28312768 MsG0180001857.01.T01:CDS 40.0%
! TCAGATTTTCAGTGAGGATG+AGG + Chr1:28313217-28313236 MsG0180001857.01.T01:CDS 40.0%
! TGCCACTTGTTGACAACTAT+GGG + Chr1:28310083-28310102 MsG0180001857.01.T01:CDS 40.0%
! TGTCATTTCTTTCTTGTCGC+AGG + Chr1:28311383-28311402 MsG0180001857.01.T01:CDS 40.0%
! TTCCCTTTTTACCTTTGCCA+TGG + Chr1:28312339-28312358 MsG0180001857.01.T01:CDS 40.0%
! TTGAAAGCTGCTGTTTGACA+GGG - Chr1:28308667-28308686 None:intergenic 40.0%
! TTTTGTCCTTGCCTCATCTA+GGG + Chr1:28309087-28309106 MsG0180001857.01.T01:CDS 40.0%
!! TATAGTTCCTGAATGGGTTG+AGG + Chr1:28308544-28308563 MsG0180001857.01.T01:CDS 40.0%
!! TCTGAAGAAGCTTTTTGAGC+AGG + Chr1:28312600-28312619 MsG0180001857.01.T01:intron 40.0%
!! TTGTGATGCTACTTTCCATC+CGG - Chr1:28310865-28310884 None:intergenic 40.0%
AAAGAGACTGCAGAGGACAT+TGG - Chr1:28309961-28309980 None:intergenic 45.0%
AATCAGGAGAGGCTTCATAG+GGG + Chr1:28308989-28309008 MsG0180001857.01.T01:CDS 45.0%
AATGCATCCATAAAGGCCGA+TGG - Chr1:28309163-28309182 None:intergenic 45.0%
ACAAAATGGTACGCTGGGAA+AGG + Chr1:28312988-28313007 MsG0180001857.01.T01:CDS 45.0%
ACACAGTGAAGACTCCTTCT+TGG - Chr1:28306453-28306472 None:intergenic 45.0%
ACAGCATCAGAGATGAACCT+TGG + Chr1:28310787-28310806 MsG0180001857.01.T01:CDS 45.0%
ACTTTCAGGAGTAATGGTGG+AGG - Chr1:28311704-28311723 None:intergenic 45.0%
AGACTATAGCTAACCGTGAC+CGG - Chr1:28312930-28312949 None:intergenic 45.0%
AGAGAGAATGTCAAGGTGAC+CGG - Chr1:28312012-28312031 None:intergenic 45.0%
AGCTTCCGGAACCTGTAAAT+TGG - Chr1:28310249-28310268 None:intergenic 45.0%
AGGAATGCAGCTACTACATG+TGG + Chr1:28308882-28308901 MsG0180001857.01.T01:CDS 45.0%
AGGACAAAGTTCTCTATCGG+TGG + Chr1:28306601-28306620 MsG0180001857.01.T01:CDS 45.0%
AGTAGGAGCAGTGGTTACAT+AGG + Chr1:28308159-28308178 MsG0180001857.01.T01:CDS 45.0%
ATGTGTTCCATCGGCCTTTA+TGG + Chr1:28309153-28309172 MsG0180001857.01.T01:CDS 45.0%
CAAATCAGGAGAGGCTTCAT+AGG + Chr1:28308987-28309006 MsG0180001857.01.T01:CDS 45.0%
CAACGTGATCAATTCCGAGA+GGG - Chr1:28313138-28313157 None:intergenic 45.0%
CACACTTTCAGGAGTAATGG+TGG - Chr1:28311707-28311726 None:intergenic 45.0%
CACTGTCAGAGAGAATGTCA+AGG - Chr1:28312019-28312038 None:intergenic 45.0%
CATAGAAGCTCTCGTCAATC+AGG - Chr1:28310570-28310589 None:intergenic 45.0%
CATAGGGGTAAAAGCTCATC+AGG + Chr1:28309004-28309023 MsG0180001857.01.T01:CDS 45.0%
CATCCACGAGATTAGAACTC+TGG - Chr1:28309573-28309592 None:intergenic 45.0%
CCTGAGTTTCCTTGAGACAA+AGG + Chr1:28312902-28312921 MsG0180001857.01.T01:CDS 45.0%
CCTTCAGATGTCTTTAGCCA+AGG - Chr1:28310807-28310826 None:intergenic 45.0%
CCTTGGCTAAAGACATCTGA+AGG + Chr1:28310804-28310823 MsG0180001857.01.T01:CDS 45.0%
CCTTTGTCTCAAGGAAACTC+AGG - Chr1:28312905-28312924 None:intergenic 45.0%
CTATGAAGCCTCTCCTGATT+TGG - Chr1:28308989-28309008 None:intergenic 45.0%
CTCTCGGAATTGATCACGTT+GGG + Chr1:28313137-28313156 MsG0180001857.01.T01:CDS 45.0%
CTGAATTGAAACATGGCGTG+AGG + Chr1:28311644-28311663 MsG0180001857.01.T01:CDS 45.0%
CTGATTGACGAGAGCTTCTA+TGG + Chr1:28310568-28310587 MsG0180001857.01.T01:intron 45.0%
CTTGCCCTTGAAGCAAGATA+AGG + Chr1:28308637-28308656 MsG0180001857.01.T01:CDS 45.0%
CTTGGCTGATCAATGGAACA+AGG + Chr1:28309797-28309816 MsG0180001857.01.T01:intron 45.0%
GAGAATTGTCTCCCTAGATG+AGG - Chr1:28309101-28309120 None:intergenic 45.0%
GATCCACAAAGAAAGGCAGT+AGG + Chr1:28308142-28308161 MsG0180001857.01.T01:CDS 45.0%
GATTCCAATGGAACTGAAGG+TGG + Chr1:28312219-28312238 MsG0180001857.01.T01:intron 45.0%
GCCTGCAAATGTGAGCAAAT+GGG + Chr1:28310138-28310157 MsG0180001857.01.T01:CDS 45.0%
GCGAGATTAACTTCGTGCAA+AGG + Chr1:28308795-28308814 MsG0180001857.01.T01:CDS 45.0%
GCTTCACTCCCTCATTATAG+TGG - Chr1:28307996-28308015 None:intergenic 45.0%
GCTTGTTCTTGGCTGATCAA+TGG + Chr1:28309790-28309809 MsG0180001857.01.T01:intron 45.0%
GGACAAAGTTCTCTATCGGT+GGG + Chr1:28306602-28306621 MsG0180001857.01.T01:CDS 45.0%
GGATCTTCCAACACTGCATA+TGG - Chr1:28308127-28308146 None:intergenic 45.0%
GTACGATGCATTCTTCAGAG+CGG - Chr1:28312254-28312273 None:intergenic 45.0%
GTCAGTCTGATGCTTGTTCT+TGG + Chr1:28309779-28309798 MsG0180001857.01.T01:intron 45.0%
GTTATGACGAACTCCAGTGT+TGG - Chr1:28308018-28308037 None:intergenic 45.0%
GTTTCTTGTATGACCAGACG+TGG + Chr1:28311169-28311188 MsG0180001857.01.T01:intron 45.0%
TACCTTTGCCATGGAAGTCA+GGG + Chr1:28312348-28312367 MsG0180001857.01.T01:CDS 45.0%
TAGAAGCTCTCGTCAATCAG+GGG - Chr1:28310568-28310587 None:intergenic 45.0%
TAGGGGTAAAAGCTCATCAG+GGG + Chr1:28309006-28309025 MsG0180001857.01.T01:CDS 45.0%
TCCTCCCATCATGAGAAGAT+AGG - Chr1:28309453-28309472 None:intergenic 45.0%
TGAACTGAAGCAAATCGGTG+TGG + Chr1:28311273-28311292 MsG0180001857.01.T01:intron 45.0%
TGAAGATGGAACCAGACAAG+AGG + Chr1:28312853-28312872 MsG0180001857.01.T01:CDS 45.0%
TGCCTGCAAATGTGAGCAAA+TGG + Chr1:28310137-28310156 MsG0180001857.01.T01:CDS 45.0%
TGGTGAAGATCCTCAGTCAA+AGG - Chr1:28306637-28306656 None:intergenic 45.0%
TTACCTTTGCCATGGAAGTC+AGG + Chr1:28312347-28312366 MsG0180001857.01.T01:CDS 45.0%
TTCTTGTATGACCAGACGTG+GGG + Chr1:28311171-28311190 MsG0180001857.01.T01:intron 45.0%
TTGAGTAAATCCCGAGACGA+AGG + Chr1:28309412-28309431 MsG0180001857.01.T01:CDS 45.0%
TTTCCTTGAGACAAAGGTCC+CGG + Chr1:28312908-28312927 MsG0180001857.01.T01:CDS 45.0%
! AAGAGGCATGAAGCTGTTCA+AGG + Chr1:28312870-28312889 MsG0180001857.01.T01:CDS 45.0%
! ACCTATCTTCTCATGATGGG+AGG + Chr1:28309449-28309468 MsG0180001857.01.T01:CDS 45.0%
! ATAGCCTTTTGCGTGCTTTC+TGG - Chr1:28309855-28309874 None:intergenic 45.0%
! ATTCGGAATCTGAAGCACAG+GGG + Chr1:28310392-28310411 MsG0180001857.01.T01:CDS 45.0%
! CAGAGTTCTAATCTCGTGGA+TGG + Chr1:28309571-28309590 MsG0180001857.01.T01:CDS 45.0%
! CATCCAGAGTTCTAATCTCG+TGG + Chr1:28309567-28309586 MsG0180001857.01.T01:CDS 45.0%
! CGGATTCAAGAGTGTGTTTC+TGG + Chr1:28308439-28308458 MsG0180001857.01.T01:CDS 45.0%
! CTTGAAAGCTGCTGTTTGAC+AGG - Chr1:28308668-28308687 None:intergenic 45.0%
! CTTTCAGGAGTAATGGTGGA+GGG - Chr1:28311703-28311722 None:intergenic 45.0%
! GAAGTATTTGTCAAAGCGGG+AGG + Chr1:28310039-28310058 MsG0180001857.01.T01:intron 45.0%
! GATTCGGAATCTGAAGCACA+GGG + Chr1:28310391-28310410 MsG0180001857.01.T01:CDS 45.0%
! GGTCAGAAAGTGTGGTTGAA+AGG + Chr1:28308924-28308943 MsG0180001857.01.T01:CDS 45.0%
! TATGCCAGAAAGCACGCAAA+AGG + Chr1:28309848-28309867 MsG0180001857.01.T01:intron 45.0%
! TCTTGTCTGGTTCCATCTTC+AGG - Chr1:28312854-28312873 None:intergenic 45.0%
! TGAAGACACATGCTGGCTAT+AGG + Chr1:28311818-28311837 MsG0180001857.01.T01:CDS 45.0%
! TGATTTTGTTCCTGCCCTCT+CGG + Chr1:28313121-28313140 MsG0180001857.01.T01:CDS 45.0%
! TTCTTGGCAGCTTTATCCTC+AGG - Chr1:28312193-28312212 None:intergenic 45.0%
! TTTTGTGTGGTATCCTCAGC+AGG + Chr1:28312630-28312649 MsG0180001857.01.T01:CDS 45.0%
!! CAGAAGCACTTCTATAAGCC+TGG + Chr1:28309352-28309371 MsG0180001857.01.T01:CDS 45.0%
!! TGAAGAATGGGTTGTGACAC+TGG + Chr1:28308958-28308977 MsG0180001857.01.T01:CDS 45.0%
!!! AAGAAAAAATATTTATTTTT+AGG - Chr1:28307781-28307800 None:intergenic 5.0%
AAAGGATGCTCCTTGCTTGC+CGG + Chr1:28311990-28312009 MsG0180001857.01.T01:CDS 50.0%
AACAGCCTCAGGTGTCAAAG+AGG - Chr1:28311038-28311057 None:intergenic 50.0%
AAGAAAGGCAGTAGGAGCAG+TGG + Chr1:28308150-28308169 MsG0180001857.01.T01:CDS 50.0%
AAGCCCCAACATGAGTTGTG+AGG - Chr1:28310281-28310300 None:intergenic 50.0%
ACAGCTTCATGCCTCTTGTC+TGG - Chr1:28312867-28312886 None:intergenic 50.0%
ACCACACTTTCTGACCTGAC+CGG - Chr1:28308920-28308939 None:intergenic 50.0%
ACGGCTGAAAACCCAGCATT+TGG - Chr1:28310327-28310346 None:intergenic 50.0%
ACTGAAGCAAATCGGTGTGG+TGG + Chr1:28311276-28311295 MsG0180001857.01.T01:intron 50.0%
AGAAGCTCTCGTCAATCAGG+GGG - Chr1:28310567-28310586 None:intergenic 50.0%
AGCAGCCTACTAACTTCACC+AGG - Chr1:28309373-28309392 None:intergenic 50.0%
AGGAGGCCTGTATCCATTGA+CGG - Chr1:28310476-28310495 None:intergenic 50.0%
CAAGTACACTCCTTCGTCTC+GGG - Chr1:28309425-28309444 None:intergenic 50.0%
CACACTATATCTCTCCGCAG+AGG + Chr1:28308841-28308860 MsG0180001857.01.T01:CDS 50.0%
CAGAAGTTGGATGAGCCTCA+AGG + Chr1:28313032-28313051 MsG0180001857.01.T01:CDS 50.0%
CAGGAGAAGTCTTCTCCCAT+TGG + Chr1:28310752-28310771 MsG0180001857.01.T01:CDS 50.0%
CAGTCCACCTTCAGTTCCAT+TGG - Chr1:28312226-28312245 None:intergenic 50.0%
CCAACGTGATCAATTCCGAG+AGG - Chr1:28313139-28313158 None:intergenic 50.0%
CCAAGACTGCAATGTGGACA+AGG - Chr1:28308521-28308540 None:intergenic 50.0%
CCTCTCGGAATTGATCACGT+TGG + Chr1:28313136-28313155 MsG0180001857.01.T01:CDS 50.0%
CCTTGTCCACATTGCAGTCT+TGG + Chr1:28308518-28308537 MsG0180001857.01.T01:CDS 50.0%
CGCCCATAGTTGTCAACAAG+TGG - Chr1:28310088-28310107 None:intergenic 50.0%
CGGAGAGATTCTTAACGGCA+TGG - Chr1:28306657-28306676 None:intergenic 50.0%
CTCGGCGGAGAGATTCTTAA+CGG - Chr1:28306662-28306681 None:intergenic 50.0%
CTTGAGGCTCATCCAACTTC+TGG - Chr1:28313034-28313053 None:intergenic 50.0%
GAAGGTCTTAGGTCTCCTGT+TGG + Chr1:28310822-28310841 MsG0180001857.01.T01:CDS 50.0%
GAATGAATGGGAGAGTTCGC+TGG + Chr1:28312405-28312424 MsG0180001857.01.T01:CDS 50.0%
GACGAGAGCTTCTATGGGAT+AGG + Chr1:28310574-28310593 MsG0180001857.01.T01:intron 50.0%
GACTATAGCTAACCGTGACC+GGG - Chr1:28312929-28312948 None:intergenic 50.0%
GCAAGTACACTCCTTCGTCT+CGG - Chr1:28309426-28309445 None:intergenic 50.0%
GCAGGCCAATTTACAGGTTC+CGG + Chr1:28310241-28310260 MsG0180001857.01.T01:CDS 50.0%
GCATCCTTTCTCTAGGTCAG+AGG - Chr1:28311979-28311998 None:intergenic 50.0%
GCCCATTTGCTCACATTTGC+AGG - Chr1:28310142-28310161 None:intergenic 50.0%
GCTCCTACTGCCTTTCTTTG+TGG - Chr1:28308148-28308167 None:intergenic 50.0%
GCTGAAAACCCAGCATTTGG+AGG - Chr1:28310324-28310343 None:intergenic 50.0%
GGAAGCAAAAGTTTCCGGTC+AGG + Chr1:28308903-28308922 MsG0180001857.01.T01:CDS 50.0%
GGAGCTGAAGTTGTTAGGAG+TGG + Chr1:28310947-28310966 MsG0180001857.01.T01:CDS 50.0%
GTAGGCTGCTGTCTGAATTC+TGG + Chr1:28309383-28309402 MsG0180001857.01.T01:CDS 50.0%
GTCACCTCTGACCTAGAGAA+AGG + Chr1:28311972-28311991 MsG0180001857.01.T01:CDS 50.0%
GTTTACCCCCTGTCATATCG+TGG - Chr1:28307269-28307288 None:intergenic 50.0%
TCTTCAGGCTAGCACAAGCA+AGG - Chr1:28312839-28312858 None:intergenic 50.0%
TGGAGTGATGTCCAGTTGTG+AGG + Chr1:28310629-28310648 MsG0180001857.01.T01:CDS 50.0%
TGGTATCCTCAGCAGGACTT+TGG + Chr1:28312637-28312656 MsG0180001857.01.T01:CDS 50.0%
TTGTCTCCCTAGATGAGGCA+AGG - Chr1:28309096-28309115 None:intergenic 50.0%
TTTGGCCTCTTTGACACCTG+AGG + Chr1:28311030-28311049 MsG0180001857.01.T01:intron 50.0%
! GGATTCGGAATCTGAAGCAC+AGG + Chr1:28310390-28310409 MsG0180001857.01.T01:CDS 50.0%
! GTAATGGTGGAGGGATCTGA+AGG - Chr1:28311694-28311713 None:intergenic 50.0%
! TGCTTGTGCTAGCCTGAAGA+TGG + Chr1:28312839-28312858 MsG0180001857.01.T01:CDS 50.0%
!! AAGCCTCTCCTGATTTGGGA+AGG - Chr1:28308984-28309003 None:intergenic 50.0%
!! ATGGAACTGAAGGTGGACTG+TGG + Chr1:28312226-28312245 MsG0180001857.01.T01:intron 50.0%
!! GCAAGGAGCATCCTTTCTCT+AGG - Chr1:28311986-28312005 None:intergenic 50.0%
!! TGGAACTGAAGGTGGACTGT+GGG + Chr1:28312227-28312246 MsG0180001857.01.T01:intron 50.0%
AGCCCTGACTTCCATGGCAA+AGG - Chr1:28312353-28312372 None:intergenic 55.0%
CAGAAGGGAAGGCAGAACTG+AGG - Chr1:28313247-28313266 None:intergenic 55.0%
GCAGTTACAGTGCTCTGTCC+AGG - Chr1:28308761-28308780 None:intergenic 55.0%
GGCCCAGAAGCAGACTTTGA+TGG + Chr1:28309884-28309903 MsG0180001857.01.T01:CDS 55.0%
GGCTTCTCCTCAACCCATTC+AGG - Chr1:28308554-28308573 None:intergenic 55.0%
GGGTTTAGCCCTGACTTCCA+TGG - Chr1:28312359-28312378 None:intergenic 55.0%
GTGATCAATTCCGAGAGGGC+AGG - Chr1:28313134-28313153 None:intergenic 55.0%
TCCGGTCAGGTCAGAAAGTG+TGG + Chr1:28308916-28308935 MsG0180001857.01.T01:CDS 55.0%
TCTTGTCGCAGGCTGCTGAA+GGG + Chr1:28311394-28311413 MsG0180001857.01.T01:CDS 55.0%
TGACCGGGACCTTTGTCTCA+AGG - Chr1:28312914-28312933 None:intergenic 55.0%
TGAGACAAAGGTCCCGGTCA+CGG + Chr1:28312914-28312933 MsG0180001857.01.T01:CDS 55.0%
TGAGGGAGTGAAGCCAACAC+TGG + Chr1:28308002-28308021 MsG0180001857.01.T01:CDS 55.0%
TGGCCTTCCCAAATCAGGAG+AGG + Chr1:28308978-28308997 MsG0180001857.01.T01:CDS 55.0%
TTCTTGTCGCAGGCTGCTGA+AGG + Chr1:28311393-28311412 MsG0180001857.01.T01:CDS 55.0%
!! GACACTGGCCTTCCCAAATC+AGG + Chr1:28308973-28308992 MsG0180001857.01.T01:CDS 55.0%
CCAAAATGCAGCCCCACGTC+TGG - Chr1:28311185-28311204 None:intergenic 60.0%
CGAAGGCCAAAGTCCTGCTG+AGG - Chr1:28312646-28312665 None:intergenic 60.0%
CTTGTCGCAGGCTGCTGAAG+GGG + Chr1:28311395-28311414 MsG0180001857.01.T01:CDS 60.0%
GTCAAGGTGACCGGCAAGCA+AGG - Chr1:28312003-28312022 None:intergenic 60.0%
! CCAGACGTGGGGCTGCATTT+TGG + Chr1:28311182-28311201 MsG0180001857.01.T01:intron 60.0%
! GGGGAGTGCACCTACCAAAG+AGG + Chr1:28310411-28310430 MsG0180001857.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 28306438 28313271 28306438 ID=MsG0180001857.01;Name=MsG0180001857.01
Chr1 mRNA 28306438 28313271 28306438 ID=MsG0180001857.01.T01;Parent=MsG0180001857.01;Name=MsG0180001857.01.T01;_AED=0.47;_eAED=0.47;_QI=127|0.3|0.18|1|1|1|11|0|1426
Chr1 exon 28306438 28306723 28306438 ID=MsG0180001857.01.T01:exon:18756;Parent=MsG0180001857.01.T01
Chr1 exon 28307979 28308189 28307979 ID=MsG0180001857.01.T01:exon:18757;Parent=MsG0180001857.01.T01
Chr1 exon 28308435 28309778 28308435 ID=MsG0180001857.01.T01:exon:18758;Parent=MsG0180001857.01.T01
Chr1 exon 28309856 28309962 28309856 ID=MsG0180001857.01.T01:exon:18759;Parent=MsG0180001857.01.T01
Chr1 exon 28310043 28310500 28310043 ID=MsG0180001857.01.T01:exon:18760;Parent=MsG0180001857.01.T01
Chr1 exon 28310596 28310968 28310596 ID=MsG0180001857.01.T01:exon:18761;Parent=MsG0180001857.01.T01
Chr1 exon 28311283 28311853 28311283 ID=MsG0180001857.01.T01:exon:18762;Parent=MsG0180001857.01.T01
Chr1 exon 28311940 28312060 28311940 ID=MsG0180001857.01.T01:exon:18763;Parent=MsG0180001857.01.T01
Chr1 exon 28312165 28312237 28312165 ID=MsG0180001857.01.T01:exon:18764;Parent=MsG0180001857.01.T01
Chr1 exon 28312331 28312544 28312331 ID=MsG0180001857.01.T01:exon:18765;Parent=MsG0180001857.01.T01
Chr1 exon 28312622 28313271 28312622 ID=MsG0180001857.01.T01:exon:18766;Parent=MsG0180001857.01.T01
Chr1 five_prime_UTR 28306438 28306564 28306438 ID=MsG0180001857.01.T01:five_prime_utr;Parent=MsG0180001857.01.T01
Chr1 CDS 28306565 28306723 28306565 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28307979 28308189 28307979 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28308435 28309778 28308435 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28309856 28309962 28309856 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28310043 28310500 28310043 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28310596 28310968 28310596 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28311283 28311853 28311283 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28311940 28312060 28311940 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28312165 28312237 28312165 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28312331 28312544 28312331 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Chr1 CDS 28312622 28313271 28312622 ID=MsG0180001857.01.T01:cds;Parent=MsG0180001857.01.T01
Gene Sequence

>MsG0180001857.01.T01

ATGGCTACACCAAAAGAACACGTTGAAGAGATACGAAGGACAAAGTTCTCTATCGGTGGGAATCCTAATCCTTTGACTGAGGATCTTCACCATGCCGTTAAGAATCTCTCCGCCGAGCTTTATGCAAAAGATGTTCATTTCCTGATGGAACTAATTCAAAATGCTGAAGATAACCACTATAATGAGGGAGTGAAGCCAACACTGGAGTTCGTCATAACTTCTGATGACATTACTGCTACTGGTGCTCCAGCCACATTACTTATTTTCAATAATGAAAAGGGTTTCTCTCCAAAAAACATTGAATCCATATGCAGTGTTGGAAGATCCACAAAGAAAGGCAGTAGGAGCAGTGGTTACATAGGAGAAAAAGGAATCGGATTCAAGAGTGTGTTTCTGGTTAGTGCTCAACCATATATTTTTAGCAATGGATATCAGATAAGGTTCAATGAGATGCCTTGTCCACATTGCAGTCTTGGATATATAGTTCCTGAATGGGTTGAGGAGAAGCCAACCCTTGTTGACATAAAGCAGATATATGGTGCTGGTGAAGCTCTTCCAACTACAACAATTGTCTTGCCCTTGAAGCAAGATAAGGTCAACCCTGTCAAACAGCAGCTTTCAAGCGTTCATCCAGAAATTCTTTTGTTTCTTACAAAAATCAGACACCTTTCTGTAAGAGAAGTTAATGAAAATCCTGGACAGAGCACTGTAACTGCTGCATCTATTTCAAGCGAGATTAACTTCGTGCAAAGGAAAAACATGAATTCTGAGTCTTACACACTATATCTCTCCGCAGAGGAAAATAGTAACAATGAGAAGGAATGCAGCTACTACATGTGGAAGCAAAAGTTTCCGGTCAGGTCAGAAAGTGTGGTTGAAAGGAGAACAGATGTTGAAGAATGGGTTGTGACACTGGCCTTCCCAAATCAGGAGAGGCTTCATAGGGGTAAAAGCTCATCAGGGGTCTATGCATTTCTTCCTACAGAGATGGTCACTAATTTTCCTTTCATTATTCAAGCAGATTTTGTCCTTGCCTCATCTAGGGAGACAATTCTCTTGGATAATAAATGGAACCAAGGGATACTTGAATGTGTTCCATCGGCCTTTATGGATGCATTCAAAACACTTGTTGTAGGATCCGATCAAGCTCCAGTATCAAGTTTGGCTCGTATGTTCAAGTTCCTTCCCATTGAAATTTCGTCATTTGAGAAGTTTAATCATGTGAGGGACAAAATCAAAGCAAAGTTGGTTAATGAAAATATTGTTCCTATTGAGACATATACGGAGCAGAAGCACTTCTATAAGCCTGGTGAAGTTAGTAGGCTGCTGTCTGAATTCTGGAATATTTTGAGTAAATCCCGAGACGAAGGAGTGTACTTGCTTAACCTATCTTCTCATGATGGGAGGAAGATCTTGAGTTCTTCGTTTGATAAAAGTGAGTATGATAATGTACTCAACTTTTTAGGGGTTAAACAAGTGACCGTTGATTGGTATGCAAAGTGCATCCAGAGTTCTAATCTCGTGGATGGTGTATCAGAAGATCTCTATCTACAACTTTTACTGTTTGTTGCTAAAAACTGGACTTCAAGATTTAAGGGAACAAACATTAATAGTATTCCATTGATAAAATATGTGGCTTCTGATGGAACTCTATCCTCTTTCAGTCTTTATGAATGCACACAGCACGCAAAGCGAGTAGTAATGACAGACTCAAAAAGCACGCAAAAGGCTATCTTGAGATTGGCCCAGAAGCAGACTTTGATGGAATGGCTTGCAAATGACGTTTCTGTTACTAATTTGAACGTGTACACTTTTGCCAATTATTTGTCAAAGCGGGAGGTTGATAGTCTCTGTAATTCTATGCCACTTGTTGACAACTATGGGCGTGTCACAGAAACAAGAAAAGGAGTTCTTGTGCCTGCAAATGTGAGCAAATGGGCAGACTTGATTGTTTCTAATCCTTGGAGCAATGGAAATTATGTTGAGCTCGGAAAGGAGTACCTAAATTCCTCATCTTATGCAGGCCAATTTACAGGTTCCGGAAGCTTATTAATTTCCTCACAACTCATGTTGGGGCTTCTGACATACCTCATATATCTCCTCCAAATGCTGGGTTTTCAGCCGTTGATACACCACTTACCAAAGAAAATGCCTTTTGCTTTTGGATTGGATTCGGAATCTGAAGCACAGGGGAGTGCACCTACCAAAGAGGTTTTTGAAATGTATAAAAATGGCAGCTGGCTTAAAGTTACCGTCAATGGATACAGGCCTCCTTCAAAGATAAACAAGTATGAAGAGGAGTTGAAAACAATTGGAGTGATGTCCAGTTGTGAGGAAGCATGTAAATTCATTGGAAGAGAACTGATGTCTCGCGCATCTTCCTTCACTTTAAGTAAGAATCATGTCCTTTTGATGCTTAACTTCATCCAATATCTCAGGAGAAGTCTTCTCCCATTGGACAAATTTGTGGACAGCATCAGAGATGAACCTTGGCTAAAGACATCTGAAGGTCTTAGGTCTCCTGTTGGATCTGTATTGAATGATTCCGGATGGAAAGTAGCATCACAAATTAGTAATATCCCTTTTATTGATCAATCTTACTTTGGTGAGGAAATATATAGCTACAAAGAGGAGCTGAAGTTGTTAGGAGTGCAAATCGGTGTGGTGGTTGATTTTGAAGATGCTATCAAAATATTTGCTTCTCTCTTCAAACAGAAGGCATCACAAGCTTCATTTAATCCAGAAAATGTCATGTCATTTCTTTCTTGTCGCAGGCTGCTGAAGGGGACTGTTTATAGATTTCCTTCTGATTTTTCGACCATTATACATAGTCAGAAGTGGCTGTATACTAAGGTTGGTTGTTATGCGTGCCCAAAACAATGCATTTTATATGGTCCAGAGTGGAAATCTATATCTCCGATTACTTGTCTCCCTTTCATTGACGACAGTGACAAATTTTATGGTACGGCAATACATGAATACAAGGAAGAACTGAAGAACCTTGGTGTTGTTACTGAATTGAAACATGGCGTGAGGTTTATGCCTAAATGTCTGAATTTTCCTTCAGATCCCTCCACCATTACTCCTGAAAGTGTGTTTTCTTTGCTGGAATGCATCCGAAGTTTATATGAAGAGCATAAGCTTTCCATTGATGATAAGTTCAGAAAGAGATTGTCCAGAAATTGGTTGAAGACACATGCTGGCTATAGGCCTCCAGAGATGTCATCTTTCCAGAAAGAACTCAATGCAATTGATGTCACCTCTGACCTAGAGAAAGGATGCTCCTTGCTTGCCGGTCACCTTGACATTCTCTCTGACAGTGATACTATTGTCAAAATATATAGGTACTTGTCTGAATACAACTGGAAACCTGAGGATAAAGCTGCCAAGAAAATTTGGATTCCAATGGAACTGAAGGAAGCTTTTTCCCTTTTTACCTTTGCCATGGAAGTCAGGGCTAAACCCTCACTTGATGATTATGTTGATCTTTGGAATGAATGGGAGAGTTCGCTGGAAGAATTGTCGTATGACAAAAGCTGTAAATTCTGGATGTTTATCCTGAAACATTTGGGCAGAAATACAGAGAAGAAACTTTCTAAGAGGTTGAGCAAACTACCTGTAACAACAGGAAGAGAAGATTTTTGTGTGGTATCCTCAGCAGGACTTTGGCCTTCGTCCATTTCTAAGTTATATGACATCTATAGAAAAATCGGCGCTCGAAATATATCTGAATCACTATGCAAAGAAGAATCTTCCTTGCTGAATGATGGTGTTGAAATGGTGCAAGTTGATCATAATGATATTCTTTTCAACTTAAAAGGTTTGATTAAGCTCATTCTTGGGTTCCTTGCTTGTGCTAGCCTGAAGATGGAACCAGACAAGAGGCATGAAGCTGTTCAAGGTCTTCTCAACCTGAGTTTCCTTGAGACAAAGGTCCCGGTCACGGTTAGCTATAGTCTATCACTGTCATCAGGGGACATCATTACAAAGAAAGATGACAAAATGGTACGCTGGGAAAGGCAAAGTTCCAAGTTTTTCATCCAGAAGTTGGATGAGCCTCAAGGAAATGCACTGAAATATGCCACATATTTCTCTGAAACAATATCAGAAGGTGTTTTGTGTGAGAATCATGATTTTGTTCCTGCCCTCTCGGAATTGATCACGTTGGGTTTTGTGCTGAAATTCAAGAATGAAGATATTGAATTTCTGATGGAGTCGAAGAACTTTCAGATTTTCAGTGAGGATGAGGAGCTCCTCAGTTCTGCCTTCCCTTCTGACTGA
Protein sequence

>MsG0180001857.01.T01

MATPKEHVEEIRRTKFSIGGNPNPLTEDLHHAVKNLSAELYAKDVHFLMELIQNAEDNHYNEGVKPTLEFVITSDDITATGAPATLLIFNNEKGFSPKNIESICSVGRSTKKGSRSSGYIGEKGIGFKSVFLVSAQPYIFSNGYQIRFNEMPCPHCSLGYIVPEWVEEKPTLVDIKQIYGAGEALPTTTIVLPLKQDKVNPVKQQLSSVHPEILLFLTKIRHLSVREVNENPGQSTVTAASISSEINFVQRKNMNSESYTLYLSAEENSNNEKECSYYMWKQKFPVRSESVVERRTDVEEWVVTLAFPNQERLHRGKSSSGVYAFLPTEMVTNFPFIIQADFVLASSRETILLDNKWNQGILECVPSAFMDAFKTLVVGSDQAPVSSLARMFKFLPIEISSFEKFNHVRDKIKAKLVNENIVPIETYTEQKHFYKPGEVSRLLSEFWNILSKSRDEGVYLLNLSSHDGRKILSSSFDKSEYDNVLNFLGVKQVTVDWYAKCIQSSNLVDGVSEDLYLQLLLFVAKNWTSRFKGTNINSIPLIKYVASDGTLSSFSLYECTQHAKRVVMTDSKSTQKAILRLAQKQTLMEWLANDVSVTNLNVYTFANYLSKREVDSLCNSMPLVDNYGRVTETRKGVLVPANVSKWADLIVSNPWSNGNYVELGKEYLNSSSYAGQFTGSGSLLISSQLMLGLLTYLIYLLQMLGFQPLIHHLPKKMPFAFGLDSESEAQGSAPTKEVFEMYKNGSWLKVTVNGYRPPSKINKYEEELKTIGVMSSCEEACKFIGRELMSRASSFTLSKNHVLLMLNFIQYLRRSLLPLDKFVDSIRDEPWLKTSEGLRSPVGSVLNDSGWKVASQISNIPFIDQSYFGEEIYSYKEELKLLGVQIGVVVDFEDAIKIFASLFKQKASQASFNPENVMSFLSCRRLLKGTVYRFPSDFSTIIHSQKWLYTKVGCYACPKQCILYGPEWKSISPITCLPFIDDSDKFYGTAIHEYKEELKNLGVVTELKHGVRFMPKCLNFPSDPSTITPESVFSLLECIRSLYEEHKLSIDDKFRKRLSRNWLKTHAGYRPPEMSSFQKELNAIDVTSDLEKGCSLLAGHLDILSDSDTIVKIYRYLSEYNWKPEDKAAKKIWIPMELKEAFSLFTFAMEVRAKPSLDDYVDLWNEWESSLEELSYDKSCKFWMFILKHLGRNTEKKLSKRLSKLPVTTGREDFCVVSSAGLWPSSISKLYDIYRKIGARNISESLCKEESSLLNDGVEMVQVDHNDILFNLKGLIKLILGFLACASLKMEPDKRHEAVQGLLNLSFLETKVPVTVSYSLSLSSGDIITKKDDKMVRWERQSSKFFIQKLDEPQGNALKYATYFSETISEGVLCENHDFVPALSELITLGFVLKFKNEDIEFLMESKNFQIFSEDEELLSSAFPSD*