Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020990.01.T01 | XP_013456108.1 | 95.536 | 336 | 12 | 2 | 1 | 335 | 1 | 334 | 0 | 586 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020990.01.T01 | Q9M2U1 | 38.636 | 352 | 138 | 13 | 1 | 323 | 1 | 303 | 8.88E-51 | 174 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020990.01.T01 | A0A072UK58 | 95.536 | 336 | 12 | 2 | 1 | 335 | 1 | 334 | 0.0 | 586 |
Gene ID | Type | Classification |
---|---|---|
MsG0480020990.01.T01 | TF | C2C2-Dof |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000085.01 | MsG0480020990.01 | 0.800256 | 1.569264e-48 | 7.273366e-46 |
MsG0180000764.01 | MsG0480020990.01 | 0.809997 | 1.434734e-50 | 8.549511e-48 |
MsG0180001857.01 | MsG0480020990.01 | 0.806694 | 7.265388e-50 | 3.969217e-47 |
MsG0280011021.01 | MsG0480020990.01 | 0.819389 | 1.191760e-52 | 9.157753e-50 |
MsG0480020990.01 | MsG0480023275.01 | 0.830879 | 2.290338e-55 | 2.444562e-52 |
MsG0480020990.01 | MsG0480023312.01 | 0.823254 | 1.529136e-53 | 1.309760e-50 |
MsG0480020990.01 | MsG0580028916.01 | 0.833283 | 5.829372e-56 | 6.682045e-53 |
MsG0480020990.01 | MsG0780041287.01 | 0.815003 | 1.154643e-51 | 7.866890e-49 |
MsG0280008722.01 | MsG0480020990.01 | 0.850286 | 1.873474e-60 | 3.651509e-57 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0280011021.01 | MsG0480020990.01 | PPI |
MsG0480020990.01 | MsG0480020944.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020990.01.T01 | MTR_4g063780 | 95.536 | 336 | 12 | 2 | 1 | 335 | 1 | 334 | 0.0 | 586 |
MsG0480020990.01.T01 | MTR_2g096740 | 41.504 | 359 | 130 | 17 | 1 | 335 | 1 | 303 | 2.73e-63 | 203 |
MsG0480020990.01.T01 | MTR_7g059400 | 43.465 | 329 | 136 | 10 | 1 | 311 | 1 | 297 | 1.20e-61 | 200 |
MsG0480020990.01.T01 | MTR_2g096740 | 38.997 | 359 | 124 | 15 | 1 | 335 | 1 | 288 | 3.73e-57 | 187 |
MsG0480020990.01.T01 | MTR_4g022370 | 38.968 | 349 | 154 | 12 | 1 | 316 | 1 | 323 | 1.52e-55 | 185 |
MsG0480020990.01.T01 | MTR_7g024670 | 59.028 | 144 | 52 | 4 | 1 | 139 | 1 | 142 | 1.98e-46 | 161 |
MsG0480020990.01.T01 | MTR_5g031440 | 87.500 | 56 | 7 | 0 | 70 | 125 | 38 | 93 | 1.35e-32 | 124 |
MsG0480020990.01.T01 | MTR_3g077750 | 54.867 | 113 | 44 | 3 | 48 | 160 | 37 | 142 | 1.81e-32 | 124 |
MsG0480020990.01.T01 | MTR_4g088580 | 42.197 | 173 | 64 | 5 | 76 | 221 | 56 | 219 | 3.00e-32 | 124 |
MsG0480020990.01.T01 | MTR_2g093220 | 80.328 | 61 | 12 | 0 | 69 | 129 | 34 | 94 | 1.63e-31 | 120 |
MsG0480020990.01.T01 | MTR_4g461080 | 66.667 | 78 | 25 | 1 | 50 | 127 | 5 | 81 | 1.84e-31 | 119 |
MsG0480020990.01.T01 | MTR_8g479350 | 60.674 | 89 | 26 | 1 | 75 | 163 | 68 | 147 | 2.02e-31 | 121 |
MsG0480020990.01.T01 | MTR_8g027295 | 57.732 | 97 | 39 | 1 | 62 | 158 | 11 | 105 | 1.16e-30 | 117 |
MsG0480020990.01.T01 | MTR_8g068210 | 69.620 | 79 | 20 | 2 | 74 | 152 | 31 | 105 | 1.23e-30 | 119 |
MsG0480020990.01.T01 | MTR_8g079060 | 54.717 | 106 | 32 | 3 | 54 | 159 | 17 | 106 | 8.04e-30 | 114 |
MsG0480020990.01.T01 | MTR_3g091820 | 67.089 | 79 | 18 | 2 | 56 | 134 | 28 | 98 | 9.76e-30 | 115 |
MsG0480020990.01.T01 | MTR_1g077600 | 60.000 | 80 | 30 | 1 | 52 | 129 | 18 | 97 | 3.08e-29 | 113 |
MsG0480020990.01.T01 | MTR_1g077600 | 60.000 | 80 | 30 | 1 | 52 | 129 | 18 | 97 | 3.61e-29 | 114 |
MsG0480020990.01.T01 | MTR_3g090430 | 63.514 | 74 | 27 | 0 | 56 | 129 | 32 | 105 | 1.04e-28 | 113 |
MsG0480020990.01.T01 | MTR_8g015840 | 58.750 | 80 | 30 | 1 | 59 | 135 | 1 | 80 | 1.33e-28 | 110 |
MsG0480020990.01.T01 | MTR_2g014060 | 67.606 | 71 | 22 | 1 | 57 | 126 | 6 | 76 | 2.20e-28 | 112 |
MsG0480020990.01.T01 | MTR_4g109980 | 82.692 | 52 | 9 | 0 | 74 | 125 | 39 | 90 | 3.37e-28 | 112 |
MsG0480020990.01.T01 | MTR_2g014170 | 88.000 | 50 | 6 | 0 | 74 | 123 | 44 | 93 | 5.76e-28 | 111 |
MsG0480020990.01.T01 | MTR_1g056810 | 63.636 | 77 | 27 | 1 | 77 | 153 | 14 | 89 | 6.57e-28 | 110 |
MsG0480020990.01.T01 | MTR_2g059540 | 84.000 | 50 | 8 | 0 | 74 | 123 | 30 | 79 | 9.08e-27 | 105 |
MsG0480020990.01.T01 | MTR_4g089095 | 71.186 | 59 | 15 | 1 | 75 | 133 | 50 | 106 | 5.09e-25 | 102 |
MsG0480020990.01.T01 | MTR_4g089095 | 71.186 | 59 | 15 | 1 | 75 | 133 | 16 | 72 | 6.16e-25 | 102 |
MsG0480020990.01.T01 | MTR_2g013370 | 66.129 | 62 | 16 | 1 | 74 | 135 | 45 | 101 | 2.13e-24 | 100 |
MsG0480020990.01.T01 | MTR_8g044220 | 66.102 | 59 | 20 | 0 | 71 | 129 | 114 | 172 | 2.91e-24 | 102 |
MsG0480020990.01.T01 | MTR_2g016030 | 63.380 | 71 | 25 | 1 | 72 | 142 | 44 | 113 | 3.63e-24 | 97.1 |
MsG0480020990.01.T01 | MTR_6g027450 | 63.333 | 60 | 22 | 0 | 68 | 127 | 82 | 141 | 7.54e-24 | 100 |
MsG0480020990.01.T01 | MTR_6g012450 | 66.667 | 60 | 20 | 0 | 68 | 127 | 129 | 188 | 1.06e-23 | 101 |
MsG0480020990.01.T01 | MTR_4g082060 | 58.571 | 70 | 26 | 1 | 58 | 127 | 108 | 174 | 1.75e-23 | 100 |
MsG0480020990.01.T01 | MTR_7g010950 | 49.412 | 85 | 43 | 0 | 68 | 152 | 128 | 212 | 2.22e-23 | 100 |
MsG0480020990.01.T01 | MTR_7g086780 | 60.000 | 70 | 25 | 2 | 60 | 129 | 86 | 152 | 2.28e-23 | 100 |
MsG0480020990.01.T01 | MTR_3g435480 | 62.687 | 67 | 24 | 1 | 68 | 134 | 129 | 194 | 3.44e-23 | 100 |
MsG0480020990.01.T01 | MTR_6g027460 | 61.667 | 60 | 23 | 0 | 68 | 127 | 89 | 148 | 4.67e-23 | 98.6 |
MsG0480020990.01.T01 | MTR_5g041420 | 43.820 | 89 | 50 | 0 | 39 | 127 | 102 | 190 | 1.24e-21 | 94.0 |
MsG0480020990.01.T01 | MTR_5g041530 | 69.091 | 55 | 16 | 1 | 77 | 131 | 142 | 195 | 1.64e-20 | 91.7 |
MsG0480020990.01.T01 | MTR_5g041380 | 48.780 | 82 | 41 | 1 | 59 | 140 | 111 | 191 | 5.81e-20 | 90.1 |
MsG0480020990.01.T01 | MTR_5g041400 | 50.725 | 69 | 34 | 0 | 59 | 127 | 103 | 171 | 1.25e-19 | 89.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020990.01.T01 | AT3G55370 | 38.636 | 352 | 138 | 13 | 1 | 323 | 1 | 303 | 9.06e-52 | 174 |
MsG0480020990.01.T01 | AT3G55370 | 42.322 | 267 | 104 | 8 | 1 | 250 | 1 | 234 | 1.74e-51 | 174 |
MsG0480020990.01.T01 | AT1G07640 | 42.456 | 285 | 145 | 9 | 57 | 334 | 3 | 275 | 5.65e-50 | 168 |
MsG0480020990.01.T01 | AT1G07640 | 42.254 | 284 | 147 | 8 | 57 | 334 | 59 | 331 | 2.43e-49 | 168 |
MsG0480020990.01.T01 | AT1G07640 | 42.254 | 284 | 147 | 8 | 57 | 334 | 67 | 339 | 3.41e-49 | 168 |
MsG0480020990.01.T01 | AT3G55370 | 39.936 | 313 | 118 | 11 | 32 | 323 | 85 | 348 | 5.10e-49 | 168 |
MsG0480020990.01.T01 | AT2G37590 | 53.846 | 156 | 32 | 2 | 1 | 129 | 1 | 143 | 8.57e-47 | 161 |
MsG0480020990.01.T01 | AT2G28810 | 37.815 | 357 | 170 | 15 | 1 | 331 | 1 | 331 | 4.10e-46 | 160 |
MsG0480020990.01.T01 | AT5G02460 | 88.158 | 76 | 9 | 0 | 54 | 129 | 74 | 149 | 4.96e-44 | 156 |
MsG0480020990.01.T01 | AT2G28810 | 40.283 | 283 | 135 | 11 | 57 | 331 | 58 | 314 | 7.88e-43 | 150 |
MsG0480020990.01.T01 | AT5G60200 | 76.389 | 72 | 13 | 1 | 70 | 141 | 50 | 117 | 1.87e-34 | 127 |
MsG0480020990.01.T01 | AT1G51700 | 58.889 | 90 | 29 | 1 | 70 | 159 | 28 | 109 | 1.20e-31 | 117 |
MsG0480020990.01.T01 | AT5G60850 | 62.791 | 86 | 25 | 2 | 74 | 159 | 50 | 128 | 2.60e-31 | 120 |
MsG0480020990.01.T01 | AT3G45610 | 53.409 | 88 | 39 | 1 | 70 | 155 | 35 | 122 | 3.05e-31 | 118 |
MsG0480020990.01.T01 | AT4G38000 | 77.049 | 61 | 14 | 0 | 69 | 129 | 35 | 95 | 2.29e-30 | 116 |
MsG0480020990.01.T01 | AT5G65590 | 81.034 | 58 | 11 | 0 | 75 | 132 | 41 | 98 | 4.67e-30 | 117 |
MsG0480020990.01.T01 | AT3G21270 | 53.000 | 100 | 28 | 2 | 75 | 155 | 29 | 128 | 3.88e-29 | 111 |
MsG0480020990.01.T01 | AT4G24060 | 50.000 | 112 | 56 | 0 | 69 | 180 | 47 | 158 | 1.96e-28 | 113 |
MsG0480020990.01.T01 | AT1G28310 | 79.661 | 59 | 11 | 1 | 75 | 133 | 27 | 84 | 3.75e-28 | 111 |
MsG0480020990.01.T01 | AT3G52440 | 70.588 | 68 | 16 | 1 | 77 | 144 | 27 | 90 | 4.15e-28 | 110 |
MsG0480020990.01.T01 | AT3G52440 | 70.588 | 68 | 16 | 1 | 77 | 144 | 46 | 109 | 5.06e-28 | 110 |
MsG0480020990.01.T01 | AT2G28510 | 73.846 | 65 | 13 | 1 | 74 | 138 | 47 | 107 | 5.38e-28 | 110 |
MsG0480020990.01.T01 | AT1G28310 | 79.661 | 59 | 11 | 1 | 75 | 133 | 51 | 108 | 5.85e-28 | 111 |
MsG0480020990.01.T01 | AT3G61850 | 58.889 | 90 | 29 | 2 | 71 | 156 | 58 | 143 | 2.25e-27 | 108 |
MsG0480020990.01.T01 | AT3G61850 | 58.889 | 90 | 29 | 2 | 71 | 156 | 58 | 143 | 2.25e-27 | 108 |
MsG0480020990.01.T01 | AT5G66940 | 50.000 | 100 | 36 | 2 | 56 | 144 | 2 | 98 | 2.39e-27 | 107 |
MsG0480020990.01.T01 | AT3G61850 | 58.889 | 90 | 29 | 2 | 71 | 156 | 70 | 155 | 3.14e-27 | 108 |
MsG0480020990.01.T01 | AT3G61850 | 58.889 | 90 | 29 | 2 | 71 | 156 | 58 | 143 | 3.16e-27 | 109 |
MsG0480020990.01.T01 | AT1G21340 | 73.770 | 61 | 10 | 1 | 77 | 137 | 40 | 94 | 3.50e-27 | 107 |
MsG0480020990.01.T01 | AT3G61850 | 58.889 | 90 | 29 | 2 | 71 | 156 | 70 | 155 | 3.86e-27 | 109 |
MsG0480020990.01.T01 | AT4G21050 | 47.581 | 124 | 50 | 3 | 68 | 190 | 17 | 126 | 4.43e-27 | 106 |
MsG0480020990.01.T01 | AT3G50410 | 70.690 | 58 | 17 | 0 | 75 | 132 | 30 | 87 | 1.44e-26 | 106 |
MsG0480020990.01.T01 | AT2G46590 | 56.250 | 80 | 35 | 0 | 43 | 122 | 36 | 115 | 3.13e-26 | 107 |
MsG0480020990.01.T01 | AT2G46590 | 56.250 | 80 | 35 | 0 | 43 | 122 | 48 | 127 | 3.53e-26 | 107 |
MsG0480020990.01.T01 | AT4G00940 | 63.514 | 74 | 23 | 2 | 59 | 129 | 50 | 122 | 1.24e-25 | 104 |
MsG0480020990.01.T01 | AT4G00940 | 63.514 | 74 | 23 | 2 | 59 | 129 | 50 | 122 | 1.24e-25 | 104 |
MsG0480020990.01.T01 | AT4G00940 | 63.514 | 74 | 23 | 2 | 59 | 129 | 50 | 122 | 1.24e-25 | 104 |
MsG0480020990.01.T01 | AT1G64620 | 66.176 | 68 | 23 | 0 | 56 | 123 | 30 | 97 | 4.25e-25 | 104 |
MsG0480020990.01.T01 | AT1G47655 | 70.000 | 60 | 16 | 1 | 66 | 123 | 18 | 77 | 2.02e-24 | 99.4 |
MsG0480020990.01.T01 | AT2G34140 | 58.442 | 77 | 28 | 2 | 53 | 129 | 39 | 111 | 3.78e-24 | 97.4 |
MsG0480020990.01.T01 | AT1G29160 | 69.492 | 59 | 17 | 1 | 71 | 129 | 58 | 115 | 1.14e-23 | 96.3 |
MsG0480020990.01.T01 | AT4G21040 | 56.250 | 80 | 30 | 1 | 77 | 156 | 27 | 101 | 3.51e-23 | 96.3 |
MsG0480020990.01.T01 | AT5G39660 | 66.667 | 63 | 20 | 1 | 67 | 129 | 130 | 191 | 3.88e-23 | 100 |
MsG0480020990.01.T01 | AT5G39660 | 66.667 | 63 | 20 | 1 | 67 | 129 | 130 | 191 | 3.88e-23 | 100 |
MsG0480020990.01.T01 | AT5G39660 | 66.667 | 63 | 20 | 1 | 67 | 129 | 130 | 191 | 3.88e-23 | 100 |
MsG0480020990.01.T01 | AT1G26790 | 54.412 | 68 | 31 | 0 | 60 | 127 | 96 | 163 | 4.08e-23 | 99.0 |
MsG0480020990.01.T01 | AT5G62430 | 56.000 | 75 | 31 | 2 | 58 | 131 | 36 | 109 | 4.26e-23 | 97.8 |
MsG0480020990.01.T01 | AT3G47500 | 65.000 | 60 | 21 | 0 | 68 | 127 | 103 | 162 | 8.46e-23 | 99.0 |
MsG0480020990.01.T01 | AT1G69570 | 61.667 | 60 | 23 | 0 | 68 | 127 | 125 | 184 | 2.25e-22 | 97.1 |
MsG0480020990.01.T01 | AT4G21080 | 63.492 | 63 | 18 | 1 | 77 | 139 | 27 | 84 | 7.83e-22 | 93.2 |
MsG0480020990.01.T01 | AT5G62940 | 36.464 | 181 | 77 | 4 | 69 | 213 | 67 | 245 | 2.39e-19 | 88.2 |
MsG0480020990.01.T01 | AT4G21030 | 54.098 | 61 | 25 | 1 | 68 | 128 | 17 | 74 | 2.07e-15 | 73.9 |
Find 116 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTACTCATCTCTTATAAATT+TGG | 0.183593 | 4:+51692766 | MsG0480020990.01.T01:exon |
GCAAGACATGTAGGCGTTAT+TGG | 0.207030 | 4:+51692079 | MsG0480020990.01.T01:CDS |
AGTAATTTATGTACTATATA+TGG | 0.208661 | 4:+51692949 | MsG0480020990.01.T01:three_prime_UTR |
GATGAGAAAATGAGGGAATA+AGG | 0.213923 | 4:+51691394 | MsG0480020990.01.T01:five_prime_UTR |
GTTGTTGTTGATGTTGTTCT+TGG | 0.217968 | 4:-51692371 | None:intergenic |
TCAAGAGCCACCGGTTAAAA+TGG | 0.246428 | 4:+51692641 | MsG0480020990.01.T01:CDS |
TCTTGAGAGTTTGTTGAATT+AGG | 0.247926 | 4:-51692189 | None:intergenic |
CCATTTGCTTGTTGATGATT+TGG | 0.249048 | 4:-51691832 | None:intergenic |
ACCAACAACAATACTATTCT+TGG | 0.250684 | 4:+51692721 | MsG0480020990.01.T01:CDS |
GTTTCTGCTTCTGCTGTTGC+TGG | 0.257390 | 4:+51692453 | MsG0480020990.01.T01:CDS |
GATCATATGGGGTTTCAAAT+TGG | 0.271163 | 4:+51692399 | MsG0480020990.01.T01:CDS |
TATTCTTGGAATGATTTATC+AGG | 0.272738 | 4:+51692735 | MsG0480020990.01.T01:CDS |
TTTATAAAAGAAAACATAAA+AGG | 0.276480 | 4:+51691558 | MsG0480020990.01.T01:five_prime_UTR |
TACTGGTGGCGGTGGTACTA+TGG | 0.292815 | 4:+51691906 | MsG0480020990.01.T01:CDS |
TTTACCTGGTGGTGCCAATT+AGG | 0.304320 | 4:-51691629 | None:intergenic |
CCTTCTCATCATGAACTAAT+TGG | 0.327970 | 4:+51692240 | MsG0480020990.01.T01:CDS |
TTCATATCTTTGATCCATTC+CGG | 0.333436 | 4:-51692789 | None:intergenic |
TGGATCAAAGATATGAAGTT+TGG | 0.348175 | 4:+51692795 | MsG0480020990.01.T01:three_prime_UTR |
GTTATGTAGATCCTCCTAAT+TGG | 0.350822 | 4:+51691615 | MsG0480020990.01.T01:CDS |
AACATTGAAGCTGCAGCATC+TGG | 0.352153 | 4:+51692582 | MsG0480020990.01.T01:CDS |
TTCTCTTCTCTGTATTCCCT+TGG | 0.355868 | 4:+51691497 | MsG0480020990.01.T01:five_prime_UTR |
AATTCCTAACCTACCCTTCA+TGG | 0.365060 | 4:+51692281 | MsG0480020990.01.T01:CDS |
ACAACAACAACAAGATCATA+TGG | 0.370266 | 4:+51692386 | MsG0480020990.01.T01:CDS |
TCTGCTGTTGCTGGAGGTGT+TGG | 0.398368 | 4:+51692462 | MsG0480020990.01.T01:CDS |
TTTCAAATTGGTATTGGTAA+TGG | 0.399190 | 4:+51692411 | MsG0480020990.01.T01:CDS |
TCCAAGAATAGTATTGTTGT+TGG | 0.406762 | 4:-51692722 | None:intergenic |
ATGGGGTTTCAAATTGGTAT+TGG | 0.408013 | 4:+51692405 | MsG0480020990.01.T01:CDS |
AATACAGAGAAGAGAAAGAA+AGG | 0.409902 | 4:-51691490 | None:intergenic |
GTAATTTATGTACTATATAT+GGG | 0.411722 | 4:+51692950 | MsG0480020990.01.T01:three_prime_UTR |
CTACGACACCCTCCACCAAC+TGG | 0.417773 | 4:-51692129 | None:intergenic |
ATGAGAAAATGAGGGAATAA+GGG | 0.423272 | 4:+51691395 | MsG0480020990.01.T01:five_prime_UTR |
GGACACTTTAGCGCTGGTTC+TGG | 0.424523 | 4:-51691985 | None:intergenic |
TGAGAAGGGATTGCACTTGA+TGG | 0.431346 | 4:-51692225 | None:intergenic |
CTGACGTTGTAATATCAATT+CGG | 0.439770 | 4:+51693042 | MsG0480020990.01.T01:three_prime_UTR |
GCTCGATCAGCCATGGAGCC+TGG | 0.444337 | 4:-51691940 | None:intergenic |
GTGTAAAGTAAGTAAACTTA+AGG | 0.447478 | 4:-51693076 | None:intergenic |
CCTCAAGTGGGAGGTAGTAC+TGG | 0.448394 | 4:+51691889 | MsG0480020990.01.T01:CDS |
CCAAATCATCAACAAGCAAA+TGG | 0.450966 | 4:+51691832 | MsG0480020990.01.T01:CDS |
GATATGAAGTTTGGAACGAT+TGG | 0.451871 | 4:+51692804 | MsG0480020990.01.T01:three_prime_UTR |
TTGATGGCTCTTTAGGGAGA+TGG | 0.453212 | 4:-51691532 | None:intergenic |
GCTGCAGCATCTGGATTTGT+TGG | 0.454209 | 4:+51692591 | MsG0480020990.01.T01:CDS |
AAACAAAATCAATTACTAGA+AGG | 0.455741 | 4:-51692902 | None:intergenic |
TCTTATAAATTTGGCCGGAA+TGG | 0.459361 | 4:+51692775 | MsG0480020990.01.T01:exon |
GATTCAAAAGTATTCAAGAA+AGG | 0.460724 | 4:-51692516 | None:intergenic |
CTTAGAAATGTTCCAGTTGG+TGG | 0.472325 | 4:+51692117 | MsG0480020990.01.T01:CDS |
CTCGATCAGACCAGGCTCCA+TGG | 0.475078 | 4:+51691930 | MsG0480020990.01.T01:CDS |
CTATGTAGCTGGTTGTAGCT+AGG | 0.480704 | 4:-51693098 | None:intergenic |
GAGATATAGCTTCAAACTCT+AGG | 0.480948 | 4:+51692613 | MsG0480020990.01.T01:CDS |
CCTCCCACTTGAGGTGGTAA+AGG | 0.483237 | 4:-51691880 | None:intergenic |
TTTAGCGCTGGTTCTGGTGG+TGG | 0.483860 | 4:-51691979 | None:intergenic |
ATACAGAGAAGAGAAAGAAA+GGG | 0.484195 | 4:-51691489 | None:intergenic |
GGTAGGTTAGGAATTGTTTG+TGG | 0.484498 | 4:-51692273 | None:intergenic |
CAACAACAACAAGATCATAT+GGG | 0.484986 | 4:+51692387 | MsG0480020990.01.T01:CDS |
AGCATTAAAGGAAGAGAGGA+GGG | 0.487565 | 4:-51691460 | None:intergenic |
GAGGCCATGAAGGGTAGGTT+AGG | 0.490552 | 4:-51692285 | None:intergenic |
AGAAATGTTCCAGTTGGTGG+AGG | 0.497986 | 4:+51692120 | MsG0480020990.01.T01:CDS |
AAAGGAAGAGAGGAGGGAGG+AGG | 0.506532 | 4:-51691454 | None:intergenic |
CCAATTAGTTCATGATGAGA+AGG | 0.516486 | 4:-51692240 | None:intergenic |
CACTTTAGCGCTGGTTCTGG+TGG | 0.522746 | 4:-51691982 | None:intergenic |
GAAGTAGCAAAATTTAGTGT+TGG | 0.523027 | 4:-51692022 | None:intergenic |
TCCTCCTAATTGGCACCACC+AGG | 0.528426 | 4:+51691625 | MsG0480020990.01.T01:CDS |
AAAGAGCATTAAAGGAAGAG+AGG | 0.530419 | 4:-51691464 | None:intergenic |
ACTGGTGGCGGTGGTACTAT+GGG | 0.530847 | 4:+51691907 | MsG0480020990.01.T01:CDS |
GGAAACGTTAACATGGGACT+TGG | 0.531022 | 4:+51692336 | MsG0480020990.01.T01:CDS |
GAGAAGGGATTGCACTTGAT+GGG | 0.532889 | 4:-51692224 | None:intergenic |
AGGAGGAAAGCAGCAATAAG+AGG | 0.536872 | 4:-51691437 | None:intergenic |
TCATCTCTTATAAATTTGGC+CGG | 0.539379 | 4:+51692770 | MsG0480020990.01.T01:exon |
AATCTATCAAGAACATCCCT+TGG | 0.539894 | 4:+51692681 | MsG0480020990.01.T01:CDS |
CAACGAGGACACTTTAGCGC+TGG | 0.540252 | 4:-51691991 | None:intergenic |
ACCTGGTGGTGCCAATTAGG+AGG | 0.541280 | 4:-51691626 | None:intergenic |
TCTGCTTCTGCTGTTGCTGG+AGG | 0.548891 | 4:+51692456 | MsG0480020990.01.T01:CDS |
GAGCATTAAAGGAAGAGAGG+AGG | 0.549927 | 4:-51691461 | None:intergenic |
ATGGCTCTTTAGGGAGATGG+TGG | 0.554378 | 4:-51691529 | None:intergenic |
AGATATAGCTTCAAACTCTA+GGG | 0.556521 | 4:+51692614 | MsG0480020990.01.T01:CDS |
GGAGGTAGTACTGGTGGCGG+TGG | 0.560481 | 4:+51691898 | MsG0480020990.01.T01:CDS |
ATTCTGCATCGAGGCCATGA+AGG | 0.561082 | 4:-51692295 | None:intergenic |
AATCTGAGTCGTTATGTCGT+TGG | 0.570962 | 4:+51692315 | MsG0480020990.01.T01:CDS |
CAATTAGTTCATGATGAGAA+GGG | 0.573984 | 4:-51692239 | None:intergenic |
TGTCGTTGGAAACGTTAACA+TGG | 0.575317 | 4:+51692329 | MsG0480020990.01.T01:CDS |
TCCACCTTTACCACCTCAAG+TGG | 0.577272 | 4:+51691876 | MsG0480020990.01.T01:CDS |
ACTATGGGCTCGATCAGACC+AGG | 0.580839 | 4:+51691922 | MsG0480020990.01.T01:CDS |
TTCTGCATCGAGGCCATGAA+GGG | 0.581643 | 4:-51692294 | None:intergenic |
CCCACTTGAGGTGGTAAAGG+TGG | 0.581750 | 4:-51691877 | None:intergenic |
ATTAAAGGAAGAGAGGAGGG+AGG | 0.592350 | 4:-51691457 | None:intergenic |
GAAATGTTCCAGTTGGTGGA+GGG | 0.594932 | 4:+51692121 | MsG0480020990.01.T01:CDS |
GCACTTAGAAATGTTCCAGT+TGG | 0.600640 | 4:+51692114 | MsG0480020990.01.T01:CDS |
TATATTATTCAACTCAGTCA+TGG | 0.602165 | 4:+51692852 | MsG0480020990.01.T01:three_prime_UTR |
AGAAGGGATTGCACTTGATG+GGG | 0.604506 | 4:-51692223 | None:intergenic |
GTAGGCGTTATTGGACAAGA+GGG | 0.605161 | 4:+51692088 | MsG0480020990.01.T01:CDS |
TAGGGCTAATCAAGAGCCAC+CGG | 0.605644 | 4:+51692632 | MsG0480020990.01.T01:CDS |
GTCGTTGGAAACGTTAACAT+GGG | 0.609381 | 4:+51692330 | MsG0480020990.01.T01:CDS |
GTCACTTCTGCAAGACATGT+AGG | 0.611130 | 4:+51692070 | MsG0480020990.01.T01:CDS |
TGTAGGCGTTATTGGACAAG+AGG | 0.616737 | 4:+51692087 | MsG0480020990.01.T01:CDS |
GCATCGAGGCCATGAAGGGT+AGG | 0.623817 | 4:-51692290 | None:intergenic |
AATTGCTGCAAATTACGCCA+TGG | 0.629104 | 4:-51692492 | None:intergenic |
TAAACGAGCTCGATCAGCCA+TGG | 0.633447 | 4:-51691947 | None:intergenic |
CATGTCTTGCAGAAGTGACG+AGG | 0.635723 | 4:-51692066 | None:intergenic |
GTGGGAGGTAGTACTGGTGG+CGG | 0.638124 | 4:+51691895 | MsG0480020990.01.T01:CDS |
AACAACAACAAGATCATATG+GGG | 0.646211 | 4:+51692388 | MsG0480020990.01.T01:CDS |
TATTATGTTCAGAGACACCA+AGG | 0.647047 | 4:-51692698 | None:intergenic |
CCACCTTTACCACCTCAAGT+GGG | 0.662217 | 4:+51691877 | MsG0480020990.01.T01:CDS |
CAAGTGGGAGGTAGTACTGG+TGG | 0.664836 | 4:+51691892 | MsG0480020990.01.T01:CDS |
GTACTACCTCCCACTTGAGG+TGG | 0.666584 | 4:-51691886 | None:intergenic |
TAGGCGTTATTGGACAAGAG+GGG | 0.675252 | 4:+51692089 | MsG0480020990.01.T01:CDS |
AGGCGTTATTGGACAAGAGG+GGG | 0.675862 | 4:+51692090 | MsG0480020990.01.T01:CDS |
ATGGTGGAGAATCAAACCAA+GGG | 0.681127 | 4:-51691513 | None:intergenic |
CCAGTACTACCTCCCACTTG+AGG | 0.681370 | 4:-51691889 | None:intergenic |
GATGGTGGAGAATCAAACCA+AGG | 0.687483 | 4:-51691514 | None:intergenic |
CCTTTACCACCTCAAGTGGG+AGG | 0.700568 | 4:+51691880 | MsG0480020990.01.T01:CDS |
GAGGTGTTGGAGTTGAACCA+TGG | 0.701694 | 4:+51692475 | MsG0480020990.01.T01:CDS |
TGAGTTGAATAATATATGAG+TGG | 0.703462 | 4:-51692845 | None:intergenic |
TTGAATAGAAGAGAAAACCA+TGG | 0.707467 | 4:-51691591 | None:intergenic |
ATTATGTTCAGAGACACCAA+GGG | 0.718424 | 4:-51692697 | None:intergenic |
AGAAGTGACGAGGTTGAGTG+AGG | 0.724186 | 4:-51692056 | None:intergenic |
GTGTTGGTTGAATCGCAACG+AGG | 0.733913 | 4:-51692006 | None:intergenic |
ACGACTCAGATTCTGCATCG+AGG | 0.741695 | 4:-51692304 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAAAAAAATTATTGTGA+TGG | - | Chr4:51691769-51691788 | None:intergenic | 10.0% |
!! | TTTATAAAAGAAAACATAAA+AGG | + | Chr4:51691558-51691577 | MsG0480020990.01.T01:five_prime_UTR | 10.0% |
!! | AGTAATTTATGTACTATATA+TGG | + | Chr4:51692949-51692968 | MsG0480020990.01.T01:three_prime_UTR | 15.0% |
!! | ATGGAAAGAAATTAAAAAAA+GGG | - | Chr4:51691793-51691812 | None:intergenic | 15.0% |
!! | GTAATTTATGTACTATATAT+GGG | + | Chr4:51692950-51692969 | MsG0480020990.01.T01:three_prime_UTR | 15.0% |
!!! | GTTTATGTTTTTTTATTTCA+TGG | + | Chr4:51692921-51692940 | MsG0480020990.01.T01:three_prime_UTR | 15.0% |
!!! | TTTCTTTTATAAAGTTTTGA+TGG | - | Chr4:51691551-51691570 | None:intergenic | 15.0% |
!! | AAACAAAATCAATTACTAGA+AGG | - | Chr4:51692905-51692924 | None:intergenic | 20.0% |
!! | ATGAAAATTAAAACTTTACC+TGG | - | Chr4:51691646-51691665 | None:intergenic | 20.0% |
!! | GATGGAAAGAAATTAAAAAA+AGG | - | Chr4:51691794-51691813 | None:intergenic | 20.0% |
!!! | AATAATTCATACACTTTTCA+TGG | + | Chr4:51692552-51692571 | MsG0480020990.01.T01:CDS | 20.0% |
!!! | ATATTTTTTAGGGTTTTTAG+TGG | - | Chr4:51691359-51691378 | None:intergenic | 20.0% |
!!! | TTCACTTTCTTTTTTGAATT+TGG | - | Chr4:51691675-51691694 | None:intergenic | 20.0% |
! | AAAAAGAGATGAGAAAATGA+GGG | + | Chr4:51691387-51691406 | MsG0480020990.01.T01:five_prime_UTR | 25.0% |
! | AAAATTAAAACTTTACCTGG+TGG | - | Chr4:51691643-51691662 | None:intergenic | 25.0% |
! | ATATTCAAGAAGATGAAGTA+AGG | - | Chr4:51691733-51691752 | None:intergenic | 25.0% |
! | CTACTCATCTCTTATAAATT+TGG | + | Chr4:51692766-51692785 | MsG0480020990.01.T01:exon | 25.0% |
! | GTGTAAAGTAAGTAAACTTA+AGG | - | Chr4:51693079-51693098 | None:intergenic | 25.0% |
! | TATATTATTCAACTCAGTCA+TGG | + | Chr4:51692852-51692871 | MsG0480020990.01.T01:three_prime_UTR | 25.0% |
! | TATTCTTGGAATGATTTATC+AGG | + | Chr4:51692735-51692754 | MsG0480020990.01.T01:CDS | 25.0% |
!! | TAAAAGGATTTTCAATACCA+TGG | + | Chr4:51691574-51691593 | MsG0480020990.01.T01:exon | 25.0% |
!! | TGAGTTGAATAATATATGAG+TGG | - | Chr4:51692848-51692867 | None:intergenic | 25.0% |
!! | TTGAATTAGGAGATTTTGAA+CGG | - | Chr4:51692179-51692198 | None:intergenic | 25.0% |
!!! | GATTCAAAAGTATTCAAGAA+AGG | - | Chr4:51692519-51692538 | None:intergenic | 25.0% |
!!! | TTTCAAATTGGTATTGGTAA+TGG | + | Chr4:51692411-51692430 | MsG0480020990.01.T01:CDS | 25.0% |
AACAACAACAAGATCATATG+GGG | + | Chr4:51692388-51692407 | MsG0480020990.01.T01:CDS | 30.0% | |
AATACAGAGAAGAGAAAGAA+AGG | - | Chr4:51691493-51691512 | None:intergenic | 30.0% | |
ACAACAACAACAAGATCATA+TGG | + | Chr4:51692386-51692405 | MsG0480020990.01.T01:CDS | 30.0% | |
ACCAACAACAATACTATTCT+TGG | + | Chr4:51692721-51692740 | MsG0480020990.01.T01:CDS | 30.0% | |
AGATATAGCTTCAAACTCTA+GGG | + | Chr4:51692614-51692633 | MsG0480020990.01.T01:CDS | 30.0% | |
ATACAGAGAAGAGAAAGAAA+GGG | - | Chr4:51691492-51691511 | None:intergenic | 30.0% | |
ATGAGAAAATGAGGGAATAA+GGG | + | Chr4:51691395-51691414 | MsG0480020990.01.T01:five_prime_UTR | 30.0% | |
CAAAAAGAGATGAGAAAATG+AGG | + | Chr4:51691386-51691405 | MsG0480020990.01.T01:five_prime_UTR | 30.0% | |
CAACAACAACAAGATCATAT+GGG | + | Chr4:51692387-51692406 | MsG0480020990.01.T01:CDS | 30.0% | |
CAATTAGTTCATGATGAGAA+GGG | - | Chr4:51692242-51692261 | None:intergenic | 30.0% | |
CTGACGTTGTAATATCAATT+CGG | + | Chr4:51693042-51693061 | MsG0480020990.01.T01:three_prime_UTR | 30.0% | |
GAAGTAGCAAAATTTAGTGT+TGG | - | Chr4:51692025-51692044 | None:intergenic | 30.0% | |
TCATCTCTTATAAATTTGGC+CGG | + | Chr4:51692770-51692789 | MsG0480020990.01.T01:exon | 30.0% | |
TCCAAGAATAGTATTGTTGT+TGG | - | Chr4:51692725-51692744 | None:intergenic | 30.0% | |
TGGATCAAAGATATGAAGTT+TGG | + | Chr4:51692795-51692814 | MsG0480020990.01.T01:three_prime_UTR | 30.0% | |
TTCATATCTTTGATCCATTC+CGG | - | Chr4:51692792-51692811 | None:intergenic | 30.0% | |
TTGAATAGAAGAGAAAACCA+TGG | - | Chr4:51691594-51691613 | None:intergenic | 30.0% | |
! | ATGGTTTTCTCTTCTATTCA+AGG | + | Chr4:51691593-51691612 | MsG0480020990.01.T01:CDS | 30.0% |
!! | AAAGGGAAAAAGAGCATTAA+AGG | - | Chr4:51691475-51691494 | None:intergenic | 30.0% |
!! | AAAGTTTTGATGGCTCTTTA+GGG | - | Chr4:51691541-51691560 | None:intergenic | 30.0% |
!! | CGATTTTCTTCCATTTTAAC+CGG | - | Chr4:51692654-51692673 | None:intergenic | 30.0% |
!! | TAAAGTTTTGATGGCTCTTT+AGG | - | Chr4:51691542-51691561 | None:intergenic | 30.0% |
!! | TCTTGAGAGTTTGTTGAATT+AGG | - | Chr4:51692192-51692211 | None:intergenic | 30.0% |
!!! | TTTTTTAGGGTTTTTAGTGG+AGG | - | Chr4:51691356-51691375 | None:intergenic | 30.0% |
AATCTATCAAGAACATCCCT+TGG | + | Chr4:51692681-51692700 | MsG0480020990.01.T01:CDS | 35.0% | |
ATGGGGTTTCAAATTGGTAT+TGG | + | Chr4:51692405-51692424 | MsG0480020990.01.T01:CDS | 35.0% | |
ATTATGTTCAGAGACACCAA+GGG | - | Chr4:51692700-51692719 | None:intergenic | 35.0% | |
CCAAATCATCAACAAGCAAA+TGG | + | Chr4:51691832-51691851 | MsG0480020990.01.T01:CDS | 35.0% | |
CCAATTAGTTCATGATGAGA+AGG | - | Chr4:51692243-51692262 | None:intergenic | 35.0% | |
CCTTCTCATCATGAACTAAT+TGG | + | Chr4:51692240-51692259 | MsG0480020990.01.T01:CDS | 35.0% | |
GAGATATAGCTTCAAACTCT+AGG | + | Chr4:51692613-51692632 | MsG0480020990.01.T01:CDS | 35.0% | |
GATCATATGGGGTTTCAAAT+TGG | + | Chr4:51692399-51692418 | MsG0480020990.01.T01:CDS | 35.0% | |
GATGAGAAAATGAGGGAATA+AGG | + | Chr4:51691394-51691413 | MsG0480020990.01.T01:five_prime_UTR | 35.0% | |
GTTATGTAGATCCTCCTAAT+TGG | + | Chr4:51691615-51691634 | MsG0480020990.01.T01:CDS | 35.0% | |
TATTATGTTCAGAGACACCA+AGG | - | Chr4:51692701-51692720 | None:intergenic | 35.0% | |
TCTTATAAATTTGGCCGGAA+TGG | + | Chr4:51692775-51692794 | MsG0480020990.01.T01:exon | 35.0% | |
TTGCTGCAGGTTAAAATAGA+TGG | - | Chr4:51691812-51691831 | None:intergenic | 35.0% | |
! | ACTTTTGAATCAAACTCTGC+TGG | + | Chr4:51692528-51692547 | MsG0480020990.01.T01:CDS | 35.0% |
! | GATATGAAGTTTGGAACGAT+TGG | + | Chr4:51692804-51692823 | MsG0480020990.01.T01:three_prime_UTR | 35.0% |
! | GTTGTTGTTGATGTTGTTCT+TGG | - | Chr4:51692374-51692393 | None:intergenic | 35.0% |
!! | AAAGAGCATTAAAGGAAGAG+AGG | - | Chr4:51691467-51691486 | None:intergenic | 35.0% |
!! | CCATTTGCTTGTTGATGATT+TGG | - | Chr4:51691835-51691854 | None:intergenic | 35.0% |
!! | TTTTCTTCCATTTTAACCGG+TGG | - | Chr4:51692651-51692670 | None:intergenic | 35.0% |
AATCTGAGTCGTTATGTCGT+TGG | + | Chr4:51692315-51692334 | MsG0480020990.01.T01:CDS | 40.0% | |
AATTCCTAACCTACCCTTCA+TGG | + | Chr4:51692281-51692300 | MsG0480020990.01.T01:CDS | 40.0% | |
AATTGCTGCAAATTACGCCA+TGG | - | Chr4:51692495-51692514 | None:intergenic | 40.0% | |
AGCATTAAAGGAAGAGAGGA+GGG | - | Chr4:51691463-51691482 | None:intergenic | 40.0% | |
CTTAGAAATGTTCCAGTTGG+TGG | + | Chr4:51692117-51692136 | MsG0480020990.01.T01:CDS | 40.0% | |
GCACTTAGAAATGTTCCAGT+TGG | + | Chr4:51692114-51692133 | MsG0480020990.01.T01:CDS | 40.0% | |
GGTAGGTTAGGAATTGTTTG+TGG | - | Chr4:51692276-51692295 | None:intergenic | 40.0% | |
GTCGTTGGAAACGTTAACAT+GGG | + | Chr4:51692330-51692349 | MsG0480020990.01.T01:CDS | 40.0% | |
TGTCGTTGGAAACGTTAACA+TGG | + | Chr4:51692329-51692348 | MsG0480020990.01.T01:CDS | 40.0% | |
TTCTCTTCTCTGTATTCCCT+TGG | + | Chr4:51691497-51691516 | MsG0480020990.01.T01:five_prime_UTR | 40.0% | |
! | ATGGTGGAGAATCAAACCAA+GGG | - | Chr4:51691516-51691535 | None:intergenic | 40.0% |
AACATTGAAGCTGCAGCATC+TGG | + | Chr4:51692582-51692601 | MsG0480020990.01.T01:CDS | 45.0% | |
AGAAGGGATTGCACTTGATG+GGG | - | Chr4:51692226-51692245 | None:intergenic | 45.0% | |
AGGAGGAAAGCAGCAATAAG+AGG | - | Chr4:51691440-51691459 | None:intergenic | 45.0% | |
ATTAAAGGAAGAGAGGAGGG+AGG | - | Chr4:51691460-51691479 | None:intergenic | 45.0% | |
GAGAAGGGATTGCACTTGAT+GGG | - | Chr4:51692227-51692246 | None:intergenic | 45.0% | |
GAGCATTAAAGGAAGAGAGG+AGG | - | Chr4:51691464-51691483 | None:intergenic | 45.0% | |
GCAAGACATGTAGGCGTTAT+TGG | + | Chr4:51692079-51692098 | MsG0480020990.01.T01:CDS | 45.0% | |
GGAAACGTTAACATGGGACT+TGG | + | Chr4:51692336-51692355 | MsG0480020990.01.T01:CDS | 45.0% | |
GTAGGCGTTATTGGACAAGA+GGG | + | Chr4:51692088-51692107 | MsG0480020990.01.T01:CDS | 45.0% | |
GTCACTTCTGCAAGACATGT+AGG | + | Chr4:51692070-51692089 | MsG0480020990.01.T01:CDS | 45.0% | |
TAGGCGTTATTGGACAAGAG+GGG | + | Chr4:51692089-51692108 | MsG0480020990.01.T01:CDS | 45.0% | |
TGAGAAGGGATTGCACTTGA+TGG | - | Chr4:51692228-51692247 | None:intergenic | 45.0% | |
TGTAGGCGTTATTGGACAAG+AGG | + | Chr4:51692087-51692106 | MsG0480020990.01.T01:CDS | 45.0% | |
! | TCAAGAGCCACCGGTTAAAA+TGG | + | Chr4:51692641-51692660 | MsG0480020990.01.T01:CDS | 45.0% |
! | TTGATGGCTCTTTAGGGAGA+TGG | - | Chr4:51691535-51691554 | None:intergenic | 45.0% |
! | TTTACCTGGTGGTGCCAATT+AGG | - | Chr4:51691632-51691651 | None:intergenic | 45.0% |
!! | AGAAATGTTCCAGTTGGTGG+AGG | + | Chr4:51692120-51692139 | MsG0480020990.01.T01:CDS | 45.0% |
!! | GAAATGTTCCAGTTGGTGGA+GGG | + | Chr4:51692121-51692140 | MsG0480020990.01.T01:CDS | 45.0% |
!! | GATGGTGGAGAATCAAACCA+AGG | - | Chr4:51691517-51691536 | None:intergenic | 45.0% |
!! | GTTGATGATTTGGTTGCTGC+AGG | - | Chr4:51691825-51691844 | None:intergenic | 45.0% |
!!! | TTGTTTTATTATATTTTTTA+GGG | - | Chr4:51691369-51691388 | None:intergenic | 5.0% |
!!! | TTTGTTTTATTATATTTTTT+AGG | - | Chr4:51691370-51691389 | None:intergenic | 5.0% |
ACGACTCAGATTCTGCATCG+AGG | - | Chr4:51692307-51692326 | None:intergenic | 50.0% | |
AGAAGTGACGAGGTTGAGTG+AGG | - | Chr4:51692059-51692078 | None:intergenic | 50.0% | |
AGGCGTTATTGGACAAGAGG+GGG | + | Chr4:51692090-51692109 | MsG0480020990.01.T01:CDS | 50.0% | |
ATTCTGCATCGAGGCCATGA+AGG | - | Chr4:51692298-51692317 | None:intergenic | 50.0% | |
CATGTCTTGCAGAAGTGACG+AGG | - | Chr4:51692069-51692088 | None:intergenic | 50.0% | |
CCACCTTTACCACCTCAAGT+GGG | + | Chr4:51691877-51691896 | MsG0480020990.01.T01:CDS | 50.0% | |
GCTGCAGCATCTGGATTTGT+TGG | + | Chr4:51692591-51692610 | MsG0480020990.01.T01:CDS | 50.0% | |
GTTTCTGCTTCTGCTGTTGC+TGG | + | Chr4:51692453-51692472 | MsG0480020990.01.T01:CDS | 50.0% | |
TAAACGAGCTCGATCAGCCA+TGG | - | Chr4:51691950-51691969 | None:intergenic | 50.0% | |
TACACCTAGCTACAACCAGC+AGG | + | Chr4:51693094-51693113 | MsG0480020990.01.T01:three_prime_UTR | 50.0% | |
TAGGGCTAATCAAGAGCCAC+CGG | + | Chr4:51692632-51692651 | MsG0480020990.01.T01:CDS | 50.0% | |
TCCACCTTTACCACCTCAAG+TGG | + | Chr4:51691876-51691895 | MsG0480020990.01.T01:CDS | 50.0% | |
TTCTGCATCGAGGCCATGAA+GGG | - | Chr4:51692297-51692316 | None:intergenic | 50.0% | |
! | ATGGCTCTTTAGGGAGATGG+TGG | - | Chr4:51691532-51691551 | None:intergenic | 50.0% |
!! | GAGGTGTTGGAGTTGAACCA+TGG | + | Chr4:51692475-51692494 | MsG0480020990.01.T01:CDS | 50.0% |
!! | GTGTTGGTTGAATCGCAACG+AGG | - | Chr4:51692009-51692028 | None:intergenic | 50.0% |
AAAGGAAGAGAGGAGGGAGG+AGG | - | Chr4:51691457-51691476 | None:intergenic | 55.0% | |
ACTATGGGCTCGATCAGACC+AGG | + | Chr4:51691922-51691941 | MsG0480020990.01.T01:CDS | 55.0% | |
CAACGAGGACACTTTAGCGC+TGG | - | Chr4:51691994-51692013 | None:intergenic | 55.0% | |
CCAGTACTACCTCCCACTTG+AGG | - | Chr4:51691892-51691911 | None:intergenic | 55.0% | |
CCCACTTGAGGTGGTAAAGG+TGG | - | Chr4:51691880-51691899 | None:intergenic | 55.0% | |
CCTCAAGTGGGAGGTAGTAC+TGG | + | Chr4:51691889-51691908 | MsG0480020990.01.T01:CDS | 55.0% | |
CCTCCCACTTGAGGTGGTAA+AGG | - | Chr4:51691883-51691902 | None:intergenic | 55.0% | |
CCTTTACCACCTCAAGTGGG+AGG | + | Chr4:51691880-51691899 | MsG0480020990.01.T01:CDS | 55.0% | |
GAGGCCATGAAGGGTAGGTT+AGG | - | Chr4:51692288-51692307 | None:intergenic | 55.0% | |
GTACTACCTCCCACTTGAGG+TGG | - | Chr4:51691889-51691908 | None:intergenic | 55.0% | |
TCCTCCTAATTGGCACCACC+AGG | + | Chr4:51691625-51691644 | MsG0480020990.01.T01:CDS | 55.0% | |
TCTGCTTCTGCTGTTGCTGG+AGG | + | Chr4:51692456-51692475 | MsG0480020990.01.T01:CDS | 55.0% | |
! | ACCTGGTGGTGCCAATTAGG+AGG | - | Chr4:51691629-51691648 | None:intergenic | 55.0% |
! | CAAGTGGGAGGTAGTACTGG+TGG | + | Chr4:51691892-51691911 | MsG0480020990.01.T01:CDS | 55.0% |
! | TCTGCTGTTGCTGGAGGTGT+TGG | + | Chr4:51692462-51692481 | MsG0480020990.01.T01:CDS | 55.0% |
!! | ACTGGTGGCGGTGGTACTAT+GGG | + | Chr4:51691907-51691926 | MsG0480020990.01.T01:CDS | 55.0% |
!! | CACTTTAGCGCTGGTTCTGG+TGG | - | Chr4:51691985-51692004 | None:intergenic | 55.0% |
!! | GGACACTTTAGCGCTGGTTC+TGG | - | Chr4:51691988-51692007 | None:intergenic | 55.0% |
!! | TACTGGTGGCGGTGGTACTA+TGG | + | Chr4:51691906-51691925 | MsG0480020990.01.T01:CDS | 55.0% |
!! | TTTAGCGCTGGTTCTGGTGG+TGG | - | Chr4:51691982-51692001 | None:intergenic | 55.0% |
CTACGACACCCTCCACCAAC+TGG | - | Chr4:51692132-51692151 | None:intergenic | 60.0% | |
CTCGATCAGACCAGGCTCCA+TGG | + | Chr4:51691930-51691949 | MsG0480020990.01.T01:CDS | 60.0% | |
GCATCGAGGCCATGAAGGGT+AGG | - | Chr4:51692293-51692312 | None:intergenic | 60.0% | |
!! | GTGGGAGGTAGTACTGGTGG+CGG | + | Chr4:51691895-51691914 | MsG0480020990.01.T01:CDS | 60.0% |
GCTCGATCAGCCATGGAGCC+TGG | - | Chr4:51691943-51691962 | None:intergenic | 65.0% | |
!! | GGAGGTAGTACTGGTGGCGG+TGG | + | Chr4:51691898-51691917 | MsG0480020990.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 51691339 | 51693113 | 51691339 | ID=MsG0480020990.01;Name=MsG0480020990.01 |
Chr4 | mRNA | 51691339 | 51693113 | 51691339 | ID=MsG0480020990.01.T01;Parent=MsG0480020990.01;Name=MsG0480020990.01.T01;_AED=0.32;_eAED=0.32;_QI=254|1|1|1|1|1|2|331|335 |
Chr4 | exon | 51691339 | 51691646 | 51691339 | ID=MsG0480020990.01.T01:exon:28437;Parent=MsG0480020990.01.T01 |
Chr4 | exon | 51691829 | 51693113 | 51691829 | ID=MsG0480020990.01.T01:exon:28438;Parent=MsG0480020990.01.T01 |
Chr4 | five_prime_UTR | 51691339 | 51691592 | 51691339 | ID=MsG0480020990.01.T01:five_prime_utr;Parent=MsG0480020990.01.T01 |
Chr4 | CDS | 51691593 | 51691646 | 51691593 | ID=MsG0480020990.01.T01:cds;Parent=MsG0480020990.01.T01 |
Chr4 | CDS | 51691829 | 51692782 | 51691829 | ID=MsG0480020990.01.T01:cds;Parent=MsG0480020990.01.T01 |
Chr4 | three_prime_UTR | 51692783 | 51693113 | 51692783 | ID=MsG0480020990.01.T01:three_prime_utr;Parent=MsG0480020990.01.T01 |
Gene Sequence |
Protein sequence |