AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002069.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002069.01.T02 MTR_1g031060 91.713 362 16 1 1 348 1 362 0.0 601
MsG0180002069.01.T02 MTR_1g048320 68.529 340 91 4 24 348 6 344 1.82e-150 427
MsG0180002069.01.T02 MTR_1g031080 65.318 346 52 3 17 348 1 292 3.55e-150 424
MsG0180002069.01.T02 MTR_2g087610 55.743 296 104 6 78 348 75 368 1.60e-101 304
MsG0180002069.01.T02 MTR_3g106930 51.590 283 122 3 81 348 95 377 1.56e-90 276
MsG0180002069.01.T02 MTR_5g006930 38.487 304 167 9 49 341 86 380 7.24e-52 176
MsG0180002069.01.T02 MTR_5g006920 38.487 304 167 9 49 341 121 415 1.53e-50 174
MsG0180002069.01.T02 MTR_5g055480 38.079 302 167 8 54 345 97 388 1.81e-49 170
MsG0180002069.01.T02 MTR_1g110290 37.086 302 171 8 54 345 99 391 2.24e-49 171
MsG0180002069.01.T02 MTR_6g083830 36.792 318 180 10 36 341 105 413 4.26e-48 167
MsG0180002069.01.T02 MTR_2g037600 32.704 318 183 7 49 340 74 386 4.38e-48 167
MsG0180002069.01.T02 MTR_8g015500 36.333 300 173 8 56 345 120 411 2.51e-47 165
MsG0180002069.01.T02 MTR_4g127550 32.110 327 188 8 41 340 68 387 6.48e-47 164
MsG0180002069.01.T02 MTR_2g005350 35.762 302 172 9 56 345 145 436 6.51e-46 162
MsG0180002069.01.T02 MTR_3g108740 37.063 286 147 7 80 338 92 371 1.41e-45 160
MsG0180002069.01.T02 MTR_1g016880 33.993 303 179 9 54 345 81 373 3.87e-45 159
MsG0180002069.01.T02 MTR_1g009960 34.752 282 170 7 47 322 78 351 5.13e-45 158
MsG0180002069.01.T02 MTR_1g009960 32.919 322 179 8 47 339 78 391 1.19e-44 158
MsG0180002069.01.T02 MTR_3g104840 37.255 306 150 9 49 341 111 387 1.37e-44 157
MsG0180002069.01.T02 MTR_2g037620 31.622 370 200 13 7 340 25 377 6.88e-44 155
MsG0180002069.01.T02 MTR_2g024120 29.808 312 165 10 80 345 61 364 6.19e-32 123
MsG0180002069.01.T02 MTR_8g094180 27.928 333 173 10 70 341 36 362 4.23e-31 121
MsG0180002069.01.T02 MTR_8g094180 29.181 281 155 7 70 312 36 310 1.19e-30 119
MsG0180002069.01.T03 MTR_1g031060 95.580 362 16 0 1 362 1 362 0.0 637
MsG0180002069.01.T03 MTR_1g031080 67.919 346 57 2 17 362 1 292 4.60e-160 450
MsG0180002069.01.T03 MTR_1g048320 68.805 343 99 4 24 362 6 344 2.45e-154 437
MsG0180002069.01.T03 MTR_2g087610 56.757 296 115 5 78 362 75 368 1.53e-105 315
MsG0180002069.01.T03 MTR_3g106930 50.168 297 119 5 81 362 95 377 1.99e-87 268
MsG0180002069.01.T03 MTR_5g006930 37.855 317 165 11 49 355 86 380 9.31e-49 169
MsG0180002069.01.T03 MTR_5g006920 37.224 317 167 11 49 355 121 415 3.01e-48 168
MsG0180002069.01.T03 MTR_5g055480 37.342 316 164 10 54 359 97 388 1.43e-46 163
MsG0180002069.01.T03 MTR_1g110290 36.508 315 169 10 54 359 99 391 6.33e-46 162
MsG0180002069.01.T03 MTR_6g083830 35.952 331 179 11 36 355 105 413 9.88e-46 162
MsG0180002069.01.T03 MTR_2g037600 32.229 332 180 8 49 354 74 386 5.01e-45 159
MsG0180002069.01.T03 MTR_8g015500 35.032 314 172 9 56 359 120 411 4.51e-44 157
MsG0180002069.01.T03 MTR_4g127550 31.085 341 187 9 41 354 68 387 1.22e-43 155
MsG0180002069.01.T03 MTR_3g108740 36.667 300 143 9 80 352 92 371 2.85e-43 154
MsG0180002069.01.T03 MTR_2g005350 33.648 318 171 9 56 359 145 436 9.64e-43 154
MsG0180002069.01.T03 MTR_1g009960 34.237 295 168 9 47 336 78 351 1.92e-42 152
MsG0180002069.01.T03 MTR_1g009960 32.537 335 177 10 47 353 78 391 4.48e-42 151
MsG0180002069.01.T03 MTR_1g016880 32.602 319 176 10 54 359 81 373 5.75e-42 150
MsG0180002069.01.T03 MTR_3g104840 35.625 320 150 10 49 355 111 387 7.19e-42 150
MsG0180002069.01.T03 MTR_2g037620 31.771 384 195 15 7 354 25 377 1.75e-41 149
MsG0180002069.01.T03 MTR_2g024120 29.179 329 159 11 80 359 61 364 1.62e-29 117
MsG0180002069.01.T03 MTR_8g094180 27.954 347 169 11 70 355 36 362 4.76e-28 113
MsG0180002069.01.T03 MTR_8g094180 29.153 295 151 8 70 326 36 310 1.23e-27 111
MsG0180002069.01.T01 MTR_1g031060 93.094 362 15 1 1 352 1 362 0.0 612
MsG0180002069.01.T01 MTR_1g031080 66.474 346 52 3 17 352 1 292 2.17e-153 433
MsG0180002069.01.T01 MTR_1g048320 70.000 340 90 5 24 352 6 344 2.69e-153 435
MsG0180002069.01.T01 MTR_2g087610 56.229 297 105 6 78 352 75 368 2.80e-103 308
MsG0180002069.01.T01 MTR_3g106930 51.220 287 121 4 81 352 95 377 7.51e-89 272
MsG0180002069.01.T01 MTR_5g006930 38.762 307 166 10 49 345 86 380 2.46e-50 172
MsG0180002069.01.T01 MTR_5g006920 37.821 312 162 10 49 345 121 415 6.54e-49 170
MsG0180002069.01.T01 MTR_1g110290 37.049 305 171 8 54 349 99 391 5.05e-48 167
MsG0180002069.01.T01 MTR_5g055480 37.908 306 166 9 54 349 97 388 8.40e-48 166
MsG0180002069.01.T01 MTR_6g083830 36.449 321 181 10 36 345 105 413 2.31e-46 163
MsG0180002069.01.T01 MTR_2g037600 32.609 322 182 8 49 344 74 386 2.41e-46 162
MsG0180002069.01.T01 MTR_8g015500 36.184 304 172 9 56 349 120 411 1.55e-45 160
MsG0180002069.01.T01 MTR_1g009960 34.737 285 170 7 47 326 78 351 3.55e-45 159
MsG0180002069.01.T01 MTR_4g127550 32.024 331 187 9 41 344 68 387 4.12e-45 159
MsG0180002069.01.T01 MTR_1g009960 32.923 325 179 8 47 343 78 391 9.43e-45 158
MsG0180002069.01.T01 MTR_2g005350 35.621 306 171 9 56 349 145 436 3.23e-44 157
MsG0180002069.01.T01 MTR_1g016880 33.660 306 180 9 54 349 81 373 5.43e-44 155
MsG0180002069.01.T01 MTR_3g108740 36.897 290 146 8 80 342 92 371 7.47e-44 155
MsG0180002069.01.T01 MTR_3g104840 36.452 310 151 9 49 345 111 387 3.09e-43 154
MsG0180002069.01.T01 MTR_2g037620 31.551 374 199 14 7 344 25 377 2.01e-42 152
MsG0180002069.01.T01 MTR_2g024120 29.430 316 165 10 80 349 61 364 1.33e-30 120
MsG0180002069.01.T01 MTR_8g094180 28.190 337 171 10 70 345 36 362 7.96e-30 117
MsG0180002069.01.T01 MTR_8g094180 29.474 285 153 7 70 316 36 310 2.03e-29 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002069.01.T02 AT3G52060 57.329 307 122 3 51 348 40 346 2.97e-125 363
MsG0180002069.01.T02 AT5G22070 48.352 364 154 7 17 348 1 362 1.97e-112 332
MsG0180002069.01.T02 AT5G25330 46.250 320 144 7 56 348 44 362 6.63e-87 266
MsG0180002069.01.T02 AT4G32290 51.220 287 121 4 81 348 93 379 7.33e-84 259
MsG0180002069.01.T02 AT4G31350 37.895 285 145 6 80 338 88 366 3.55e-53 180
MsG0180002069.01.T02 AT4G31350 37.895 285 145 6 80 338 88 366 3.55e-53 180
MsG0180002069.01.T02 AT4G31350 37.895 285 145 6 80 338 88 366 3.55e-53 180
MsG0180002069.01.T02 AT4G31350 37.895 285 140 7 80 338 88 361 3.42e-52 177
MsG0180002069.01.T02 AT1G51770 36.455 299 173 8 56 345 100 390 1.04e-48 169
MsG0180002069.01.T02 AT1G10280 36.275 306 173 9 52 345 115 410 4.90e-48 167
MsG0180002069.01.T02 AT3G21310 35.786 299 175 7 56 345 91 381 8.70e-48 166
MsG0180002069.01.T02 AT3G21310 35.786 299 175 7 56 345 91 381 8.70e-48 166
MsG0180002069.01.T02 AT5G25970 36.531 271 156 7 80 341 118 381 2.56e-46 162
MsG0180002069.01.T02 AT5G25970 36.531 271 156 7 80 341 118 381 2.56e-46 162
MsG0180002069.01.T02 AT5G25970 36.531 271 156 7 80 341 118 381 2.56e-46 162
MsG0180002069.01.T02 AT4G30060 34.122 296 156 8 75 340 103 389 9.56e-46 161
MsG0180002069.01.T02 AT4G30060 34.122 296 156 8 75 340 103 389 9.56e-46 161
MsG0180002069.01.T02 AT5G11730 34.437 302 179 8 54 345 92 384 1.62e-45 160
MsG0180002069.01.T02 AT2G19160 34.130 293 160 7 75 340 100 386 1.32e-44 157
MsG0180002069.01.T02 AT2G19160 34.130 293 160 7 75 340 100 386 1.32e-44 157
MsG0180002069.01.T02 AT1G68380 35.179 307 172 9 54 346 98 391 8.32e-43 153
MsG0180002069.01.T02 AT1G68390 33.663 303 182 8 54 345 112 406 1.19e-42 153
MsG0180002069.01.T02 AT5G16170 34.875 281 158 7 81 345 136 407 2.53e-41 149
MsG0180002069.01.T02 AT4G25870 33.681 288 157 6 81 340 99 380 3.78e-41 148
MsG0180002069.01.T02 AT5G57270 32.993 294 161 7 76 340 93 379 2.79e-40 146
MsG0180002069.01.T02 AT5G57270 32.993 294 161 7 76 340 93 379 2.79e-40 146
MsG0180002069.01.T02 AT5G57270 32.993 294 161 7 76 340 93 379 2.79e-40 146
MsG0180002069.01.T02 AT5G57270 32.993 294 161 7 76 340 93 379 2.79e-40 146
MsG0180002069.01.T02 AT5G57270 32.993 294 161 7 76 340 93 379 2.79e-40 146
MsG0180002069.01.T02 AT1G10880 33.110 299 182 8 52 341 91 380 3.90e-40 145
MsG0180002069.01.T02 AT1G73810 36.237 287 154 10 76 345 142 416 8.19e-36 135
MsG0180002069.01.T02 AT1G51770 32.441 299 158 7 56 345 100 363 1.54e-35 133
MsG0180002069.01.T02 AT5G14550 29.851 268 166 6 76 327 60 321 6.15e-33 125
MsG0180002069.01.T02 AT1G62305 29.630 297 157 8 79 330 67 356 6.51e-30 118
MsG0180002069.01.T02 AT5G14550 27.491 291 175 7 76 336 60 344 7.39e-30 118
MsG0180002069.01.T02 AT5G14550 27.796 313 172 9 76 340 60 366 7.42e-30 117
MsG0180002069.01.T02 AT1G11940 26.357 387 217 14 6 345 10 375 3.99e-27 110
MsG0180002069.01.T02 AT1G62305 31.797 217 121 5 79 275 67 276 5.61e-27 108
MsG0180002069.01.T02 AT3G21310 40.690 145 83 3 56 199 91 233 6.90e-24 99.4
MsG0180002069.01.T02 AT5G14550 26.740 273 173 8 76 336 60 317 1.65e-22 97.1
MsG0180002069.01.T02 AT1G11940 27.734 256 160 7 6 255 10 246 5.17e-21 91.7
MsG0180002069.01.T03 AT3G52060 55.486 319 123 3 51 362 40 346 7.02e-124 360
MsG0180002069.01.T03 AT5G22070 49.451 364 164 7 17 362 1 362 1.27e-115 340
MsG0180002069.01.T03 AT5G25330 44.910 334 142 9 56 362 44 362 8.64e-84 259
MsG0180002069.01.T03 AT4G32290 49.169 301 120 5 81 362 93 379 2.04e-80 251
MsG0180002069.01.T03 AT4G31350 36.455 299 144 7 80 352 88 366 6.42e-50 172
MsG0180002069.01.T03 AT4G31350 36.455 299 144 7 80 352 88 366 6.42e-50 172
MsG0180002069.01.T03 AT4G31350 36.455 299 144 7 80 352 88 366 6.42e-50 172
MsG0180002069.01.T03 AT4G31350 36.455 299 139 8 80 352 88 361 6.88e-49 169
MsG0180002069.01.T03 AT1G51770 35.144 313 172 9 56 359 100 390 1.74e-46 163
MsG0180002069.01.T03 AT3G21310 35.144 313 172 8 56 359 91 381 2.90e-45 159
MsG0180002069.01.T03 AT3G21310 35.144 313 172 8 56 359 91 381 2.90e-45 159
MsG0180002069.01.T03 AT1G10280 36.050 319 170 11 52 359 115 410 3.75e-45 160
MsG0180002069.01.T03 AT5G25970 35.069 288 151 8 80 355 118 381 3.03e-44 157
MsG0180002069.01.T03 AT5G25970 35.069 288 151 8 80 355 118 381 3.03e-44 157
MsG0180002069.01.T03 AT5G25970 35.069 288 151 8 80 355 118 381 3.03e-44 157
MsG0180002069.01.T03 AT5G11730 33.333 318 175 9 54 359 92 384 3.84e-43 154
MsG0180002069.01.T03 AT4G30060 32.903 310 155 9 75 354 103 389 1.84e-42 152
MsG0180002069.01.T03 AT4G30060 32.903 310 155 9 75 354 103 389 1.84e-42 152
MsG0180002069.01.T03 AT2G19160 32.899 307 159 8 75 354 100 386 2.76e-41 149
MsG0180002069.01.T03 AT2G19160 32.899 307 159 8 75 354 100 386 2.76e-41 149
MsG0180002069.01.T03 AT1G68380 34.268 321 170 10 54 360 98 391 2.11e-40 147
MsG0180002069.01.T03 AT1G68390 32.808 317 180 10 54 359 112 406 7.83e-40 145
MsG0180002069.01.T03 AT5G16170 33.898 295 156 8 81 359 136 407 1.82e-38 142
MsG0180002069.01.T03 AT4G25870 32.450 302 156 7 81 354 99 380 6.75e-38 140
MsG0180002069.01.T03 AT5G57270 32.787 305 155 8 79 354 96 379 1.19e-37 139
MsG0180002069.01.T03 AT5G57270 32.787 305 155 8 79 354 96 379 1.19e-37 139
MsG0180002069.01.T03 AT5G57270 32.787 305 155 8 79 354 96 379 1.19e-37 139
MsG0180002069.01.T03 AT5G57270 32.787 305 155 8 79 354 96 379 1.19e-37 139
MsG0180002069.01.T03 AT5G57270 32.787 305 155 8 79 354 96 379 1.19e-37 139
MsG0180002069.01.T03 AT1G10880 33.016 315 175 10 52 355 91 380 1.27e-37 139
MsG0180002069.01.T03 AT1G51770 31.629 313 156 9 56 359 100 363 1.16e-33 128
MsG0180002069.01.T03 AT1G73810 34.884 301 153 11 76 359 142 416 1.14e-32 126
MsG0180002069.01.T03 AT5G14550 28.723 282 165 7 76 341 60 321 7.61e-30 117
MsG0180002069.01.T03 AT1G62305 29.582 311 153 10 79 344 67 356 3.97e-27 110
MsG0180002069.01.T03 AT5G14550 27.852 298 165 8 76 343 60 337 1.04e-26 109
MsG0180002069.01.T03 AT5G14550 26.846 298 168 8 76 343 60 337 1.09e-26 109
MsG0180002069.01.T03 AT1G11940 26.185 401 214 16 6 359 10 375 6.66e-25 104
MsG0180002069.01.T03 AT1G62305 31.602 231 117 7 79 289 67 276 3.76e-24 101
MsG0180002069.01.T03 AT3G21310 42.069 145 80 4 56 199 91 232 4.97e-23 97.4
MsG0180002069.01.T03 AT5G14550 26.214 309 169 11 76 354 60 339 1.58e-19 89.0
MsG0180002069.01.T03 AT1G11940 27.037 270 158 8 6 269 10 246 1.16e-18 85.1
MsG0180002069.01.T01 AT3G52060 57.282 309 123 3 51 352 40 346 2.99e-125 363
MsG0180002069.01.T01 AT5G22070 49.176 364 155 7 17 352 1 362 3.84e-114 336
MsG0180002069.01.T01 AT5G25330 45.988 324 143 8 56 352 44 362 4.84e-85 262
MsG0180002069.01.T01 AT4G32290 50.859 291 120 5 81 352 93 379 5.02e-82 254
MsG0180002069.01.T01 AT4G31350 37.716 289 144 7 80 342 88 366 1.77e-51 175
MsG0180002069.01.T01 AT4G31350 37.716 289 144 7 80 342 88 366 1.77e-51 175
MsG0180002069.01.T01 AT4G31350 37.716 289 144 7 80 342 88 366 1.77e-51 175
MsG0180002069.01.T01 AT4G31350 37.716 289 139 8 80 342 88 361 2.10e-50 172
MsG0180002069.01.T01 AT1G51770 35.974 303 173 8 56 349 100 390 1.71e-47 166
MsG0180002069.01.T01 AT1G10280 36.246 309 173 9 52 349 115 410 3.08e-47 165
MsG0180002069.01.T01 AT3G21310 35.644 303 174 7 56 349 91 381 4.27e-46 161
MsG0180002069.01.T01 AT3G21310 35.644 303 174 7 56 349 91 381 4.27e-46 161
MsG0180002069.01.T01 AT5G25970 36.727 275 154 8 80 345 118 381 6.73e-46 161
MsG0180002069.01.T01 AT5G25970 36.727 275 154 8 80 345 118 381 6.73e-46 161
MsG0180002069.01.T01 AT5G25970 36.727 275 154 8 80 345 118 381 6.73e-46 161
MsG0180002069.01.T01 AT5G11730 34.098 305 180 8 54 349 92 384 4.01e-44 156
MsG0180002069.01.T01 AT4G30060 34.000 300 155 9 75 344 103 389 4.63e-44 156
MsG0180002069.01.T01 AT4G30060 34.000 300 155 9 75 344 103 389 4.63e-44 156
MsG0180002069.01.T01 AT2G19160 34.007 297 159 8 75 344 100 386 7.31e-43 153
MsG0180002069.01.T01 AT2G19160 34.007 297 159 8 75 344 100 386 7.31e-43 153
MsG0180002069.01.T01 AT1G68380 35.370 311 170 9 54 350 98 391 2.21e-42 152
MsG0180002069.01.T01 AT1G68390 33.876 307 180 9 54 349 112 406 1.20e-41 150
MsG0180002069.01.T01 AT4G25870 32.323 297 163 6 76 344 94 380 1.19e-40 147
MsG0180002069.01.T01 AT5G16170 34.767 279 157 7 81 345 136 403 1.35e-40 147
MsG0180002069.01.T01 AT5G57270 32.550 298 161 7 76 344 93 379 4.16e-39 143
MsG0180002069.01.T01 AT5G57270 32.550 298 161 7 76 344 93 379 4.16e-39 143
MsG0180002069.01.T01 AT5G57270 32.550 298 161 7 76 344 93 379 4.16e-39 143
MsG0180002069.01.T01 AT5G57270 32.550 298 161 7 76 344 93 379 4.16e-39 143
MsG0180002069.01.T01 AT5G57270 32.550 298 161 7 76 344 93 379 4.16e-39 143
MsG0180002069.01.T01 AT1G10880 33.333 303 180 9 52 345 91 380 5.24e-39 142
MsG0180002069.01.T01 AT1G51770 32.013 303 158 7 56 349 100 363 7.20e-35 131
MsG0180002069.01.T01 AT1G73810 36.082 291 153 11 76 349 142 416 3.60e-34 130
MsG0180002069.01.T01 AT5G14550 30.147 272 164 6 76 331 60 321 8.79e-32 122
MsG0180002069.01.T01 AT5G14550 28.125 288 167 7 76 333 60 337 1.12e-28 114
MsG0180002069.01.T01 AT5G14550 28.125 288 167 7 76 333 60 337 1.25e-28 114
MsG0180002069.01.T01 AT1G62305 29.568 301 156 9 79 334 67 356 1.81e-28 114
MsG0180002069.01.T01 AT1G11940 26.087 391 217 14 6 349 10 375 1.42e-26 108
MsG0180002069.01.T01 AT1G62305 31.674 221 120 6 79 279 67 276 1.75e-25 105
MsG0180002069.01.T01 AT3G21310 41.379 145 82 3 56 199 91 233 3.88e-23 97.4
MsG0180002069.01.T01 AT5G14550 27.425 299 168 10 76 344 60 339 2.51e-21 94.0
MsG0180002069.01.T01 AT1G11940 27.308 260 160 7 6 259 10 246 3.90e-20 89.4

Find 101 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGACCTTCGCTCCTTTA+TGG 0.113850 1:-32065871 MsG0180002069.01.T03:CDS
GAGGAAGAGGAAAGCGATTT+TGG 0.152318 1:+32065904 None:intergenic
ACACAACCTTTGTATGTTTC+CGG 0.216341 1:+32065399 None:intergenic
TTACACTGACAAGAGTTAAT+TGG 0.233095 1:-32065253 MsG0180002069.01.T03:CDS
TGAAAATGTGGGTGGTGGGG+TGG 0.245851 1:+32065945 None:intergenic
CCTGACCTTCGCTCCTTTAT+GGG 0.268953 1:-32065870 MsG0180002069.01.T03:CDS
GGGTGGTGGCGCGGCGGAAG+AGG 0.280290 1:+32065966 None:intergenic
AATGTGGGTGGTGGGGTGGG+TGG 0.282199 1:+32065949 None:intergenic
AATTGGACCGGTTCTGTCTA+TGG 0.305698 1:-32065236 MsG0180002069.01.T03:CDS
GTGGGTGGTGGGGTGGGTGG+TGG 0.321363 1:+32065952 None:intergenic
GAAAATGTGGGTGGTGGGGT+GGG 0.327856 1:+32065946 None:intergenic
GGGAGAGAAAGAGGATAAGT+AGG 0.388484 1:+32066047 None:intergenic
CCCATAAAGGAGCGAAGGTC+AGG 0.398527 1:+32065870 None:intergenic
ACATTCCGGCGAGAATTTCC+TGG 0.406133 1:+32065124 None:intergenic
GGAATTGAGAGAGGCGTTGT+TGG 0.406498 1:+32066026 None:intergenic
CAATAATACTTATTTATACA+TGG 0.408546 1:+32065341 None:intergenic
AGAGCTAGATAGACAAGAAT+TGG 0.410739 1:+32066082 None:intergenic
TGGTGGGGTGGGTGGTGGCG+CGG 0.410827 1:+32065957 None:intergenic
GGTTAGAGTTGGTGAGGAAG+AGG 0.414237 1:+32065891 None:intergenic
TAGATATGAATAACTCCAAT+TGG 0.419719 1:+32065151 None:intergenic
AGGCACAAAATCTCAATATA+CGG 0.420039 1:-32065505 MsG0180002069.01.T03:CDS
GGCGTTGTTGGGAGAGAAAG+AGG 0.420670 1:+32066038 None:intergenic
TCTATCAATGGAGGATTTGA+AGG 0.423138 1:-32065288 MsG0180002069.01.T03:CDS
AGAGGATAAGTAGGAGAGAG+AGG 0.424061 1:+32066056 None:intergenic
GAGGTCGTTGGCGTCGGAGG+AGG 0.428151 1:+32065991 None:intergenic
GTCAGCTGAGGGTGTCCAAT+TGG 0.435014 1:-32065166 MsG0180002069.01.T03:CDS
GAGGATTTGAAGGGGTGTAC+TGG 0.437720 1:-32065278 MsG0180002069.01.T03:CDS
GGGGTACAGCAGGTTAAATT+CGG 0.439451 1:+32065550 None:intergenic
GAATTGAGAGAGGCGTTGTT+GGG 0.440040 1:+32066027 None:intergenic
TGAGAGAATCTCAATATAGC+TGG 0.445207 1:+32065529 None:intergenic
GAGGGTGAAAATGTGGGTGG+TGG 0.449399 1:+32065940 None:intergenic
GGGTGAAAATGTGGGTGGTG+GGG 0.451995 1:+32065942 None:intergenic
GTCGGAAAATAATGCTCCTC+TGG 0.452311 1:+32065314 None:intergenic
GTTGACAACAATGGATTTAG+TGG 0.454154 1:+32066106 None:intergenic
GGTGAGGTCGTTGGCGTCGG+AGG 0.464169 1:+32065988 None:intergenic
GGGAGATAAGTGCAAAGTAT+TGG 0.464878 1:+32065654 None:intergenic
AGGGTGAAAATGTGGGTGGT+GGG 0.465017 1:+32065941 None:intergenic
GCTGCCGGAGGTTAAGTTTG+AGG 0.473400 1:-32065456 MsG0180002069.01.T03:CDS
AGTGCAAAGTATTGGTTTAG+TGG 0.473586 1:+32065662 None:intergenic
TGGCGCGGCGGAAGAGGGTG+AGG 0.474692 1:+32065972 None:intergenic
CAATATAGCTGGGGTACAGC+AGG 0.483151 1:+32065540 None:intergenic
ACCACCTATGTCGCCTCCCC+CGG 0.484181 1:-32065791 MsG0180002069.01.T03:CDS
GGTTTAGTGGGTCATCTAAG+AGG 0.485602 1:+32065675 None:intergenic
GGTGGTGGCGCGGCGGAAGA+GGG 0.486431 1:+32065967 None:intergenic
GTTATTCATATCTATTCGCC+AGG 0.491313 1:-32065142 MsG0180002069.01.T03:CDS
ATCAACGGAGCAAGACATTC+CGG 0.492670 1:+32065110 None:intergenic
GAAGAGCGGAATACAATGTT+GGG 0.494292 1:+32065634 None:intergenic
TGGGGTGGGTGGTGGCGCGG+CGG 0.499139 1:+32065960 None:intergenic
GATGGAGAGTAACGTTTGGT+GGG 0.499446 1:+32065734 None:intergenic
TCGGAGGAGGAGAAAGGGAA+GGG 0.502232 1:+32066004 None:intergenic
GAGGGTGAGGTCGTTGGCGT+CGG 0.508276 1:+32065985 None:intergenic
CGGGCAGCCGCGATGAGTGA+TGG 0.513763 1:+32065716 None:intergenic
TTGGCGTCGGAGGAGGAGAA+AGG 0.516416 1:+32065998 None:intergenic
AGAAGAGCGGAATACAATGT+TGG 0.517351 1:+32065633 None:intergenic
GAGAGAATCTCAATATAGCT+GGG 0.521210 1:+32065530 None:intergenic
GTGCAAAGTATTGGTTTAGT+GGG 0.523801 1:+32065663 None:intergenic
TGATGGAGAGTAACGTTTGG+TGG 0.531016 1:+32065733 None:intergenic
AAGGGAAGGGGAATTGAGAG+AGG 0.532613 1:+32066017 None:intergenic
TCCTCCATTGATAGAAGAGT+CGG 0.534544 1:+32065296 None:intergenic
GCGGAAGAGGGTGAGGTCGT+TGG 0.536313 1:+32065979 None:intergenic
GGCAGATGCTAGGAGACGGC+GGG 0.537343 1:+32065697 None:intergenic
CGGAGGAGGAGAAAGGGAAG+GGG 0.543764 1:+32066005 None:intergenic
CATCTAAGAGGGCAGATGCT+AGG 0.551980 1:+32065687 None:intergenic
TGTTGAGAGATCAAAAGCTA+TGG 0.553117 1:-32065379 MsG0180002069.01.T03:CDS
AGCGAAGGTCAGGTTAGAGT+TGG 0.554646 1:+32065880 None:intergenic
TGGCGTCGGAGGAGGAGAAA+GGG 0.556002 1:+32065999 None:intergenic
AGCTCTGGTGACACCTCCGC+TGG 0.558641 1:+32065194 None:intergenic
TGGAGAGAATGTAATGCTGC+CGG 0.559352 1:-32065471 MsG0180002069.01.T03:CDS
AAATCCTCAAACTTAACCTC+CGG 0.560806 1:+32065452 None:intergenic
CTATCAATGGAGGATTTGAA+GGG 0.561198 1:-32065287 MsG0180002069.01.T03:CDS
TGGATGGCCATAGACAGAAC+CGG 0.566191 1:+32065229 None:intergenic
TCCGACTCTTCTATCAATGG+AGG 0.568136 1:-32065297 MsG0180002069.01.T03:CDS
GTTTAGTGGGTCATCTAAGA+GGG 0.573553 1:+32065676 None:intergenic
CTGACAAGAGTTAATTGGAC+CGG 0.584560 1:-32065248 MsG0180002069.01.T03:CDS
AATATACGGTATAATGCTCG+TGG 0.590108 1:-32065491 MsG0180002069.01.T03:CDS
AGAATTGGTGTTGACAACAA+TGG 0.596836 1:+32066097 None:intergenic
GTCGGAGGAGGAGAAAGGGA+AGG 0.597449 1:+32066003 None:intergenic
CATAGGTGGTGGGATCTGCA+TGG 0.600671 1:+32065804 None:intergenic
GGGCAGATGCTAGGAGACGG+CGG 0.605522 1:+32065696 None:intergenic
AGGTCAGGTTAGAGTTGGTG+AGG 0.605637 1:+32065885 None:intergenic
CTGGAGTATAAAGATGTGGA+TGG 0.614331 1:+32065213 None:intergenic
TATGAGGGTGAAAATGTGGG+TGG 0.616892 1:+32065937 None:intergenic
GGGGAGGCGACATAGGTGGT+GGG 0.619712 1:+32065794 None:intergenic
ATTCGCCAGGAAATTCTCGC+CGG 0.625707 1:-32065129 MsG0180002069.01.T03:CDS
TCCGCTGGAGTATAAAGATG+TGG 0.632350 1:+32065209 None:intergenic
TAAGTATTATTGTTATCCAG+AGG 0.638428 1:-32065330 MsG0180002069.01.T03:CDS
AGAGGGCAGATGCTAGGAGA+CGG 0.639417 1:+32065693 None:intergenic
GTACAGCAGGTTAAATTCGG+AGG 0.643049 1:+32065553 None:intergenic
CTTGAACCGGAAACATACAA+AGG 0.648378 1:-32065405 MsG0180002069.01.T03:CDS
CTATATTGAGATTCTCTCAG+AGG 0.650945 1:-32065525 MsG0180002069.01.T03:CDS
TCATCAGCAATATTCATCAA+CGG 0.655931 1:+32065095 None:intergenic
TCCACATCTTTATACTCCAG+CGG 0.656388 1:-32065210 MsG0180002069.01.T03:CDS
GAGTGATGGAGAGTAACGTT+TGG 0.656827 1:+32065730 None:intergenic
GGACGTAGATGTTGAAGAGG+TGG 0.662229 1:+32065825 None:intergenic
TATCAATGGAGGATTTGAAG+GGG 0.662422 1:-32065286 MsG0180002069.01.T03:CDS
AGAGAATCTCAATATAGCTG+GGG 0.663742 1:+32065531 None:intergenic
ATAAATTGAAACGAGAAGAG+CGG 0.674747 1:+32065620 None:intergenic
CATGGACGTAGATGTTGAAG+AGG 0.678016 1:+32065822 None:intergenic
ACATCTTTATACTCCAGCGG+AGG 0.688034 1:-32065207 MsG0180002069.01.T03:CDS
AGAGAATGTAATGCTGCCGG+AGG 0.692280 1:-32065468 MsG0180002069.01.T03:CDS
TTACTCTCCATCACTCATCG+CGG 0.773471 1:-32065723 MsG0180002069.01.T03:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATAATACTTATTTATACA+TGG + Chr1:32065880-32065899 None:intergenic 15.0%
!!! ATTTAGTGGTTTTTTATTGA+GGG + Chr1:32065101-32065120 None:intergenic 20.0%
! TAAGTATTATTGTTATCCAG+AGG - Chr1:32065888-32065907 MsG0180002069.01.T03:CDS 25.0%
! TAGATATGAATAACTCCAAT+TGG + Chr1:32066070-32066089 None:intergenic 25.0%
!!! CACAATTTTTTATCTTGAAC+CGG - Chr1:32065800-32065819 MsG0180002069.01.T03:CDS 25.0%
!!! GATTTAGTGGTTTTTTATTG+AGG + Chr1:32065102-32065121 None:intergenic 25.0%
!!! TTTAGTGGTTTTTTATTGAG+GGG + Chr1:32065100-32065119 None:intergenic 25.0%
AGGCACAAAATCTCAATATA+CGG - Chr1:32065713-32065732 MsG0180002069.01.T03:CDS 30.0%
ATAAATTGAAACGAGAAGAG+CGG + Chr1:32065601-32065620 None:intergenic 30.0%
TCATCAGCAATATTCATCAA+CGG + Chr1:32066126-32066145 None:intergenic 30.0%
TTACACTGACAAGAGTTAAT+TGG - Chr1:32065965-32065984 MsG0180002069.01.T03:CDS 30.0%
! ACGAAGAATTTTTCCCATAA+AGG + Chr1:32065364-32065383 None:intergenic 30.0%
! AGGTTAAGTTTGAGGATTTT+CGG - Chr1:32065770-32065789 MsG0180002069.01.T03:CDS 30.0%
! TTTTATGAGGGTGAAAATGT+GGG + Chr1:32065287-32065306 None:intergenic 30.0%
!!! GTTTTTTATTGAGGGGTTTT+GGG + Chr1:32065093-32065112 None:intergenic 30.0%
!!! TTTTTTATTGAGGGGTTTTG+GGG + Chr1:32065092-32065111 None:intergenic 30.0%
AAATCCTCAAACTTAACCTC+CGG + Chr1:32065769-32065788 None:intergenic 35.0%
AATATACGGTATAATGCTCG+TGG - Chr1:32065727-32065746 MsG0180002069.01.T03:CDS 35.0%
ACACAACCTTTGTATGTTTC+CGG + Chr1:32065822-32065841 None:intergenic 35.0%
AGAGAATCTCAATATAGCTG+GGG + Chr1:32065690-32065709 None:intergenic 35.0%
AGAGCTAGATAGACAAGAAT+TGG + Chr1:32065139-32065158 None:intergenic 35.0%
CTATATTGAGATTCTCTCAG+AGG - Chr1:32065693-32065712 MsG0180002069.01.T03:CDS 35.0%
CTATCAATGGAGGATTTGAA+GGG - Chr1:32065931-32065950 MsG0180002069.01.T03:CDS 35.0%
GAGAGAATCTCAATATAGCT+GGG + Chr1:32065691-32065710 None:intergenic 35.0%
GTTATTCATATCTATTCGCC+AGG - Chr1:32066076-32066095 MsG0180002069.01.T03:CDS 35.0%
TATCAATGGAGGATTTGAAG+GGG - Chr1:32065932-32065951 MsG0180002069.01.T03:CDS 35.0%
TCTATCAATGGAGGATTTGA+AGG - Chr1:32065930-32065949 MsG0180002069.01.T03:CDS 35.0%
TGAGAGAATCTCAATATAGC+TGG + Chr1:32065692-32065711 None:intergenic 35.0%
TGTTGAGAGATCAAAAGCTA+TGG - Chr1:32065839-32065858 MsG0180002069.01.T03:CDS 35.0%
! GGTTAAGTTTGAGGATTTTC+GGG - Chr1:32065771-32065790 MsG0180002069.01.T03:CDS 35.0%
! GTTGACAACAATGGATTTAG+TGG + Chr1:32065115-32065134 None:intergenic 35.0%
! GTTTTATGAGGGTGAAAATG+TGG + Chr1:32065288-32065307 None:intergenic 35.0%
! TTTTCCGACTCTTCTATCAA+TGG - Chr1:32065918-32065937 MsG0180002069.01.T03:CDS 35.0%
!! AGAATTGGTGTTGACAACAA+TGG + Chr1:32065124-32065143 None:intergenic 35.0%
!! AGTGCAAAGTATTGGTTTAG+TGG + Chr1:32065559-32065578 None:intergenic 35.0%
!! GTGCAAAGTATTGGTTTAGT+GGG + Chr1:32065558-32065577 None:intergenic 35.0%
!! TTTGGGTTTGGGTTTTATGA+GGG + Chr1:32065299-32065318 None:intergenic 35.0%
!!! GGTTTTTTATTGAGGGGTTT+TGG + Chr1:32065094-32065113 None:intergenic 35.0%
!!! TTGCTGATGACGTCATTTTT+CGG - Chr1:32066136-32066155 MsG0180002069.01.T03:CDS 35.0%
!!! TTTTGGGTTTGGGTTTTATG+AGG + Chr1:32065300-32065319 None:intergenic 35.0%
AGAAGAGCGGAATACAATGT+TGG + Chr1:32065588-32065607 None:intergenic 40.0%
CTGACAAGAGTTAATTGGAC+CGG - Chr1:32065970-32065989 MsG0180002069.01.T03:CDS 40.0%
CTGGAGTATAAAGATGTGGA+TGG + Chr1:32066008-32066027 None:intergenic 40.0%
CTTGAACCGGAAACATACAA+AGG - Chr1:32065813-32065832 MsG0180002069.01.T03:CDS 40.0%
GAAGAGCGGAATACAATGTT+GGG + Chr1:32065587-32065606 None:intergenic 40.0%
GGGAGATAAGTGCAAAGTAT+TGG + Chr1:32065567-32065586 None:intergenic 40.0%
TCCACATCTTTATACTCCAG+CGG - Chr1:32066008-32066027 MsG0180002069.01.T03:CDS 40.0%
TCCTCCATTGATAGAAGAGT+CGG + Chr1:32065925-32065944 None:intergenic 40.0%
! AGGAAGAGGAAAGCGATTTT+GGG + Chr1:32065316-32065335 None:intergenic 40.0%
! GTTTAGTGGGTCATCTAAGA+GGG + Chr1:32065545-32065564 None:intergenic 40.0%
! TTTTTCCCATAAAGGAGCGA+AGG + Chr1:32065356-32065375 None:intergenic 40.0%
!!! AACGTTTGGTGGGTTTTGAA+GGG + Chr1:32065477-32065496 None:intergenic 40.0%
!!! AAGTTTGAGGATTTTCGGGT+TGG - Chr1:32065775-32065794 MsG0180002069.01.T03:CDS 40.0%
!!! AGGAAAGCGATTTTGGGTTT+GGG + Chr1:32065310-32065329 None:intergenic 40.0%
!!! TAACGTTTGGTGGGTTTTGA+AGG + Chr1:32065478-32065497 None:intergenic 40.0%
!!! TGCTGATGACGTCATTTTTC+GGG - Chr1:32066137-32066156 MsG0180002069.01.T03:CDS 40.0%
!!! TGGGTTTTGAAGGGATGAAA+CGG + Chr1:32065468-32065487 None:intergenic 40.0%
ACATCTTTATACTCCAGCGG+AGG - Chr1:32066011-32066030 MsG0180002069.01.T03:CDS 45.0%
AGAGGATAAGTAGGAGAGAG+AGG + Chr1:32065165-32065184 None:intergenic 45.0%
ATCAACGGAGCAAGACATTC+CGG + Chr1:32066111-32066130 None:intergenic 45.0%
CATGGACGTAGATGTTGAAG+AGG + Chr1:32065399-32065418 None:intergenic 45.0%
GATGGAGAGTAACGTTTGGT+GGG + Chr1:32065487-32065506 None:intergenic 45.0%
GGGAGAGAAAGAGGATAAGT+AGG + Chr1:32065174-32065193 None:intergenic 45.0%
GGGGTACAGCAGGTTAAATT+CGG + Chr1:32065671-32065690 None:intergenic 45.0%
GTACAGCAGGTTAAATTCGG+AGG + Chr1:32065668-32065687 None:intergenic 45.0%
GTCGGAAAATAATGCTCCTC+TGG + Chr1:32065907-32065926 None:intergenic 45.0%
TATGAGGGTGAAAATGTGGG+TGG + Chr1:32065284-32065303 None:intergenic 45.0%
TCCGACTCTTCTATCAATGG+AGG - Chr1:32065921-32065940 MsG0180002069.01.T03:CDS 45.0%
TCCGCTGGAGTATAAAGATG+TGG + Chr1:32066012-32066031 None:intergenic 45.0%
TGATGGAGAGTAACGTTTGG+TGG + Chr1:32065488-32065507 None:intergenic 45.0%
TGGAGAGAATGTAATGCTGC+CGG - Chr1:32065747-32065766 MsG0180002069.01.T03:CDS 45.0%
TTACTCTCCATCACTCATCG+CGG - Chr1:32065495-32065514 MsG0180002069.01.T03:CDS 45.0%
! AATTGGACCGGTTCTGTCTA+TGG - Chr1:32065982-32066001 MsG0180002069.01.T03:CDS 45.0%
! GAGGAAGAGGAAAGCGATTT+TGG + Chr1:32065317-32065336 None:intergenic 45.0%
! GAGTGATGGAGAGTAACGTT+TGG + Chr1:32065491-32065510 None:intergenic 45.0%
! GGTTTAGTGGGTCATCTAAG+AGG + Chr1:32065546-32065565 None:intergenic 45.0%
!! GAATTGAGAGAGGCGTTGTT+GGG + Chr1:32065194-32065213 None:intergenic 45.0%
!!! AGAGCTTTTTCGTCAGCTGA+GGG - Chr1:32066041-32066060 MsG0180002069.01.T03:CDS 45.0%
!!! GAGGAAAGCGATTTTGGGTT+TGG + Chr1:32065311-32065330 None:intergenic 45.0%
!!! ACTTTAATTTATTTTTAAAA+AGG + Chr1:32065633-32065652 None:intergenic 5.0%
AAGGGAAGGGGAATTGAGAG+AGG + Chr1:32065204-32065223 None:intergenic 50.0%
ACATTCCGGCGAGAATTTCC+TGG + Chr1:32066097-32066116 None:intergenic 50.0%
ACCTGACCTTCGCTCCTTTA+TGG - Chr1:32065347-32065366 MsG0180002069.01.T03:CDS 50.0%
AGAGAATGTAATGCTGCCGG+AGG - Chr1:32065750-32065769 MsG0180002069.01.T03:CDS 50.0%
AGCGAAGGTCAGGTTAGAGT+TGG + Chr1:32065341-32065360 None:intergenic 50.0%
AGGGTGAAAATGTGGGTGGT+GGG + Chr1:32065280-32065299 None:intergenic 50.0%
ATTCGCCAGGAAATTCTCGC+CGG - Chr1:32066089-32066108 MsG0180002069.01.T03:CDS 50.0%
CAATATAGCTGGGGTACAGC+AGG + Chr1:32065681-32065700 None:intergenic 50.0%
CATCTAAGAGGGCAGATGCT+AGG + Chr1:32065534-32065553 None:intergenic 50.0%
CCTGACCTTCGCTCCTTTAT+GGG - Chr1:32065348-32065367 MsG0180002069.01.T03:CDS 50.0%
CTCAGCTGACGAAAAAGCTC+TGG + Chr1:32066042-32066061 None:intergenic 50.0%
GGACGTAGATGTTGAAGAGG+TGG + Chr1:32065396-32065415 None:intergenic 50.0%
TGGATGGCCATAGACAGAAC+CGG + Chr1:32065992-32066011 None:intergenic 50.0%
! GAGGATTTGAAGGGGTGTAC+TGG - Chr1:32065940-32065959 MsG0180002069.01.T03:CDS 50.0%
!! AGGTCAGGTTAGAGTTGGTG+AGG + Chr1:32065336-32065355 None:intergenic 50.0%
!! GGAATTGAGAGAGGCGTTGT+TGG + Chr1:32065195-32065214 None:intergenic 50.0%
!! GGTTAGAGTTGGTGAGGAAG+AGG + Chr1:32065330-32065349 None:intergenic 50.0%
!!! CAGAGCTTTTTCGTCAGCTG+AGG - Chr1:32066040-32066059 MsG0180002069.01.T03:CDS 50.0%
AGAGGGCAGATGCTAGGAGA+CGG + Chr1:32065528-32065547 None:intergenic 55.0%
CCCATAAAGGAGCGAAGGTC+AGG + Chr1:32065351-32065370 None:intergenic 55.0%
GAGGGTGAAAATGTGGGTGG+TGG + Chr1:32065281-32065300 None:intergenic 55.0%
GCTGCCGGAGGTTAAGTTTG+AGG - Chr1:32065762-32065781 MsG0180002069.01.T03:CDS 55.0%
GGCGTTGTTGGGAGAGAAAG+AGG + Chr1:32065183-32065202 None:intergenic 55.0%
GGGTGAAAATGTGGGTGGTG+GGG + Chr1:32065279-32065298 None:intergenic 55.0%
TCGGAGGAGGAGAAAGGGAA+GGG + Chr1:32065217-32065236 None:intergenic 55.0%
! ACGGTTTTCGAAGACACCGC+CGG + Chr1:32065449-32065468 None:intergenic 55.0%
!! CATAGGTGGTGGGATCTGCA+TGG + Chr1:32065417-32065436 None:intergenic 55.0%
!! GAAAATGTGGGTGGTGGGGT+GGG + Chr1:32065275-32065294 None:intergenic 55.0%
!! GTCAGCTGAGGGTGTCCAAT+TGG - Chr1:32066052-32066071 MsG0180002069.01.T03:CDS 55.0%
!! TGAAAATGTGGGTGGTGGGG+TGG + Chr1:32065276-32065295 None:intergenic 55.0%
CGGAGGAGGAGAAAGGGAAG+GGG + Chr1:32065216-32065235 None:intergenic 60.0%
GTCGGAGGAGGAGAAAGGGA+AGG + Chr1:32065218-32065237 None:intergenic 60.0%
! CGGTTTTCGAAGACACCGCC+GGG + Chr1:32065448-32065467 None:intergenic 60.0%
! GGTTTTCGAAGACACCGCCG+GGG + Chr1:32065447-32065466 None:intergenic 60.0%
! GTTTTCGAAGACACCGCCGG+GGG + Chr1:32065446-32065465 None:intergenic 60.0%
! TGGCGTCGGAGGAGGAGAAA+GGG + Chr1:32065222-32065241 None:intergenic 60.0%
! TTGGCGTCGGAGGAGGAGAA+AGG + Chr1:32065223-32065242 None:intergenic 60.0%
ACCACCTATGTCGCCTCCCC+CGG - Chr1:32065427-32065446 MsG0180002069.01.T03:CDS 65.0%
GAGGGTGAGGTCGTTGGCGT+CGG + Chr1:32065236-32065255 None:intergenic 65.0%
GCGGAAGAGGGTGAGGTCGT+TGG + Chr1:32065242-32065261 None:intergenic 65.0%
GGCAGATGCTAGGAGACGGC+GGG + Chr1:32065524-32065543 None:intergenic 65.0%
GGGCAGATGCTAGGAGACGG+CGG + Chr1:32065525-32065544 None:intergenic 65.0%
GGGGAGGCGACATAGGTGGT+GGG + Chr1:32065427-32065446 None:intergenic 65.0%
! AGCTCTGGTGACACCTCCGC+TGG + Chr1:32066027-32066046 None:intergenic 65.0%
!! AATGTGGGTGGTGGGGTGGG+TGG + Chr1:32065272-32065291 None:intergenic 65.0%
ACCTATGTCGCCTCCCCCGG+CGG - Chr1:32065430-32065449 MsG0180002069.01.T03:CDS 70.0%
CGGGCAGCCGCGATGAGTGA+TGG + Chr1:32065505-32065524 None:intergenic 70.0%
GGGGGAGGCGACATAGGTGG+TGG + Chr1:32065428-32065447 None:intergenic 70.0%
TTCGAAGACACCGCCGGGGG+AGG + Chr1:32065443-32065462 None:intergenic 70.0%
! GAGGTCGTTGGCGTCGGAGG+AGG + Chr1:32065230-32065249 None:intergenic 70.0%
! GGTGAGGTCGTTGGCGTCGG+AGG + Chr1:32065233-32065252 None:intergenic 70.0%
ACCGCCGGGGGAGGCGACAT+AGG + Chr1:32065434-32065453 None:intergenic 75.0%
GCCGGGGGAGGCGACATAGG+TGG + Chr1:32065431-32065450 None:intergenic 75.0%
TGGCGCGGCGGAAGAGGGTG+AGG + Chr1:32065249-32065268 None:intergenic 75.0%
! GGTGGTGGCGCGGCGGAAGA+GGG + Chr1:32065254-32065273 None:intergenic 75.0%
! TGGTGGGGTGGGTGGTGGCG+CGG + Chr1:32065264-32065283 None:intergenic 75.0%
!! GTGGGTGGTGGGGTGGGTGG+TGG + Chr1:32065269-32065288 None:intergenic 75.0%
!! GGGTGGTGGCGCGGCGGAAG+AGG + Chr1:32065255-32065274 None:intergenic 80.0%
!! TGGGGTGGGTGGTGGCGCGG+CGG + Chr1:32065261-32065280 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 32065076 32066164 32065076 ID=MsG0180002069.01;Name=MsG0180002069.01
Chr1 mRNA 32065076 32066164 32065076 ID=MsG0180002069.01.T01;Parent=MsG0180002069.01;Name=MsG0180002069.01.T01;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0|2|0|352
Chr1 exon 32065076 32065559 32065076 ID=MsG0180002069.01.T01:exon:7636;Parent=MsG0180002069.01.T01
Chr1 CDS 32065590 32066164 32065590 ID=MsG0180002069.01.T01:cds;Parent=MsG0180002069.01.T01
Chr1 CDS 32065076 32065559 32065076 ID=MsG0180002069.01.T01:cds;Parent=MsG0180002069.01.T01
Chr1 mRNA 32065076 32066164 32065076 ID=MsG0180002069.01.T02;Parent=MsG0180002069.01;Name=MsG0180002069.01.T02;_AED=0.08;_eAED=0.09;_QI=0|0|0|1|0|0|2|0|348
Chr1 exon 32065076 32065547 32065076 ID=MsG0180002069.01.T02:exon:7637;Parent=MsG0180002069.01.T02
Chr1 CDS 32065590 32066164 32065590 ID=MsG0180002069.01.T02:cds;Parent=MsG0180002069.01.T02
Chr1 CDS 32065076 32065547 32065076 ID=MsG0180002069.01.T02:cds;Parent=MsG0180002069.01.T02
Chr1 mRNA 32065076 32066164 32065076 ID=MsG0180002069.01.T03;Parent=MsG0180002069.01;Name=MsG0180002069.01.T03;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|0|1|0|362
Chr1 exon 32065076 32066164 32065076 ID=MsG0180002069.01.T03:exon:7638;Parent=MsG0180002069.01.T03
Chr1 CDS 32065076 32066164 32065076 ID=MsG0180002069.01.T03:cds;Parent=MsG0180002069.01.T03
Gene Sequence

>MsG0180002069.01.T02

ATGGCAAAATTAACCCCAAAACCCCTCAATAAAAAACCACTAAATCCATTGTTGTCAACACCAATTCTTGTCTATCTAGCTCTCATCCTCTCTCTCCTACTTATCCTCTTTCTCTCCCAACAACGCCTCTCTCAATTCCCCTTCCCTTTCTCCTCCTCCGACGCCAACGACCTCACCCTCTTCCGCCGCGCCACCACCCACCCCACCACCCACATTTTCACCCTCATAAAACCCAAACCCAAAATCGCTTTCCTCTTCCTCACCAACTCTAACCTGACCTTCGCTCCTTTATGGGAAAAATTCTTCGTTAGAAACAACCACCTCTTCAACATCTACGTCCATGCAGATCCCACCACCTATGTCGCCTCCCCCGGCGGTGTCTTCGAAAACCGTTTCATCCCTTCAAAACCCACCAAACGTTACTCTCCATCACTCATCGCGGCTGCCCGCCGTCTCCTAGCATCTGCCCTCTTAGATGACCCACTAAACCAATACTTTGCACTTATCTCCCAACATTGTATTCCGCTCTTCTCGTTTCAATTTATTTATAACTACCTTTTTAAAAATAAATTAAACTATATTGAGATTCTCTCAGAGGCACAAAATCTCAATATACGGTATAATGCTCGTGGAGAGAATGTAATGCTGCCGGAGGTTAAGTTTGAGGATTTTCGGGTTGGTTCACAATTTTTTATCTTGAACCGGAAACATACAAAGGTTGTGTTGAGAGATCAAAAGCTATGGAACAAATTTCAGATTCCATGTATAAATAAGTATTATTGTTATCCAGAGGAGCATTATTTTCCGACTCTTCTATCAATGGAGGATTTGAAGGGGTGTACTGGTTTTACACTGACAAGAGTTAATTGGACCGGTTCTGTCTATGGCCATCCACATCTTTATACTCCAGCGGAGGTGTCACCAGAGCTTTTTCGTCAGCTGAGGGTGTCCAATTGGAGTTATTCATATCTATTCGCCAGGAAATTCTCGCCGGAATGTCTTGCTCCGTTGATGAATATTGCTGATGACGTCATTTTTCGGGATTGA

>MsG0180002069.01.T03

ATGGCAAAATTAACCCCAAAACCCCTCAATAAAAAACCACTAAATCCATTGTTGTCAACACCAATTCTTGTCTATCTAGCTCTCATCCTCTCTCTCCTACTTATCCTCTTTCTCTCCCAACAACGCCTCTCTCAATTCCCCTTCCCTTTCTCCTCCTCCGACGCCAACGACCTCACCCTCTTCCGCCGCGCCACCACCCACCCCACCACCCACATTTTCACCCTCATAAAACCCAAACCCAAAATCGCTTTCCTCTTCCTCACCAACTCTAACCTGACCTTCGCTCCTTTATGGGAAAAATTCTTCGTTAGAAACAACCACCTCTTCAACATCTACGTCCATGCAGATCCCACCACCTATGTCGCCTCCCCCGGCGGTGTCTTCGAAAACCGTTTCATCCCTTCAAAACCCACCAAACGTTACTCTCCATCACTCATCGCGGCTGCCCGCCGTCTCCTAGCATCTGCCCTCTTAGATGACCCACTAAACCAATACTTTGCACTTATCTCCCAACATTGTATTCCGCTCTTCTCGTTTCAATTTATTTATAACTACCTTTTTAAAAATAAATTAAAGTCATTTACAAATTCCTCCGAATTTAACCTGCTGTACCCCAGCTATATTGAGATTCTCTCAGAGGCACAAAATCTCAATATACGGTATAATGCTCGTGGAGAGAATGTAATGCTGCCGGAGGTTAAGTTTGAGGATTTTCGGGTTGGTTCACAATTTTTTATCTTGAACCGGAAACATACAAAGGTTGTGTTGAGAGATCAAAAGCTATGGAACAAATTTCAGATTCCATGTATAAATAAGTATTATTGTTATCCAGAGGAGCATTATTTTCCGACTCTTCTATCAATGGAGGATTTGAAGGGGTGTACTGGTTTTACACTGACAAGAGTTAATTGGACCGGTTCTGTCTATGGCCATCCACATCTTTATACTCCAGCGGAGGTGTCACCAGAGCTTTTTCGTCAGCTGAGGGTGTCCAATTGGAGTTATTCATATCTATTCGCCAGGAAATTCTCGCCGGAATGTCTTGCTCCGTTGATGAATATTGCTGATGACGTCATTTTTCGGGATTGA

>MsG0180002069.01.T01

ATGGCAAAATTAACCCCAAAACCCCTCAATAAAAAACCACTAAATCCATTGTTGTCAACACCAATTCTTGTCTATCTAGCTCTCATCCTCTCTCTCCTACTTATCCTCTTTCTCTCCCAACAACGCCTCTCTCAATTCCCCTTCCCTTTCTCCTCCTCCGACGCCAACGACCTCACCCTCTTCCGCCGCGCCACCACCCACCCCACCACCCACATTTTCACCCTCATAAAACCCAAACCCAAAATCGCTTTCCTCTTCCTCACCAACTCTAACCTGACCTTCGCTCCTTTATGGGAAAAATTCTTCGTTAGAAACAACCACCTCTTCAACATCTACGTCCATGCAGATCCCACCACCTATGTCGCCTCCCCCGGCGGTGTCTTCGAAAACCGTTTCATCCCTTCAAAACCCACCAAACGTTACTCTCCATCACTCATCGCGGCTGCCCGCCGTCTCCTAGCATCTGCCCTCTTAGATGACCCACTAAACCAATACTTTGCACTTATCTCCCAACATTGTATTCCGCTCTTCTCGTTTCAATTTATTTATAACTACCTTTTTAAAAATAAATTAAAGCTGTACCCCAGCTATATTGAGATTCTCTCAGAGGCACAAAATCTCAATATACGGTATAATGCTCGTGGAGAGAATGTAATGCTGCCGGAGGTTAAGTTTGAGGATTTTCGGGTTGGTTCACAATTTTTTATCTTGAACCGGAAACATACAAAGGTTGTGTTGAGAGATCAAAAGCTATGGAACAAATTTCAGATTCCATGTATAAATAAGTATTATTGTTATCCAGAGGAGCATTATTTTCCGACTCTTCTATCAATGGAGGATTTGAAGGGGTGTACTGGTTTTACACTGACAAGAGTTAATTGGACCGGTTCTGTCTATGGCCATCCACATCTTTATACTCCAGCGGAGGTGTCACCAGAGCTTTTTCGTCAGCTGAGGGTGTCCAATTGGAGTTATTCATATCTATTCGCCAGGAAATTCTCGCCGGAATGTCTTGCTCCGTTGATGAATATTGCTGATGACGTCATTTTTCGGGATTGA
Protein sequence

>MsG0180002069.01.T02

MAKLTPKPLNKKPLNPLLSTPILVYLALILSLLLILFLSQQRLSQFPFPFSSSDANDLTLFRRATTHPTTHIFTLIKPKPKIAFLFLTNSNLTFAPLWEKFFVRNNHLFNIYVHADPTTYVASPGGVFENRFIPSKPTKRYSPSLIAAARRLLASALLDDPLNQYFALISQHCIPLFSFQFIYNYLFKNKLNYIEILSEAQNLNIRYNARGENVMLPEVKFEDFRVGSQFFILNRKHTKVVLRDQKLWNKFQIPCINKYYCYPEEHYFPTLLSMEDLKGCTGFTLTRVNWTGSVYGHPHLYTPAEVSPELFRQLRVSNWSYSYLFARKFSPECLAPLMNIADDVIFRD*

>MsG0180002069.01.T03

MAKLTPKPLNKKPLNPLLSTPILVYLALILSLLLILFLSQQRLSQFPFPFSSSDANDLTLFRRATTHPTTHIFTLIKPKPKIAFLFLTNSNLTFAPLWEKFFVRNNHLFNIYVHADPTTYVASPGGVFENRFIPSKPTKRYSPSLIAAARRLLASALLDDPLNQYFALISQHCIPLFSFQFIYNYLFKNKLKSFTNSSEFNLLYPSYIEILSEAQNLNIRYNARGENVMLPEVKFEDFRVGSQFFILNRKHTKVVLRDQKLWNKFQIPCINKYYCYPEEHYFPTLLSMEDLKGCTGFTLTRVNWTGSVYGHPHLYTPAEVSPELFRQLRVSNWSYSYLFARKFSPECLAPLMNIADDVIFRD*

>MsG0180002069.01.T01

MAKLTPKPLNKKPLNPLLSTPILVYLALILSLLLILFLSQQRLSQFPFPFSSSDANDLTLFRRATTHPTTHIFTLIKPKPKIAFLFLTNSNLTFAPLWEKFFVRNNHLFNIYVHADPTTYVASPGGVFENRFIPSKPTKRYSPSLIAAARRLLASALLDDPLNQYFALISQHCIPLFSFQFIYNYLFKNKLKLYPSYIEILSEAQNLNIRYNARGENVMLPEVKFEDFRVGSQFFILNRKHTKVVLRDQKLWNKFQIPCINKYYCYPEEHYFPTLLSMEDLKGCTGFTLTRVNWTGSVYGHPHLYTPAEVSPELFRQLRVSNWSYSYLFARKFSPECLAPLMNIADDVIFRD*