AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002070.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002070.01.T01 MTR_1g041240 99.432 352 2 0 9 360 768 1119 0.0 727
MsG0180002070.01.T01 MTR_1g041240 99.432 352 2 0 9 360 767 1118 0.0 727
MsG0180002070.01.T01 MTR_1g041240 99.432 352 2 0 9 360 766 1117 0.0 727
MsG0180002070.01.T01 MTR_3g079840 79.096 354 71 2 9 360 767 1119 0.0 592
MsG0180002070.01.T01 MTR_3g079840 79.096 354 71 2 9 360 766 1118 0.0 591
MsG0180002070.01.T01 MTR_5g086700 78.249 354 74 2 9 360 771 1123 0.0 582
MsG0180002070.01.T01 MTR_5g086700 77.966 354 72 3 9 360 771 1120 0.0 573
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002070.01.T01 AT3G11910 75.140 358 82 4 5 360 763 1115 0.0 561
MsG0180002070.01.T01 AT3G11910 75.140 358 82 4 5 360 763 1115 0.0 561
MsG0180002070.01.T01 AT3G11910 75.140 358 82 4 5 360 762 1114 0.0 560
MsG0180002070.01.T01 AT3G11910 75.140 358 82 4 5 360 762 1114 0.0 560
MsG0180002070.01.T01 AT5G06600 75.419 358 81 4 5 360 763 1115 0.0 557
MsG0180002070.01.T01 AT5G06600 75.419 358 81 4 5 360 764 1116 0.0 557
MsG0180002070.01.T01 AT5G06600 77.679 224 44 3 5 226 764 983 2.84e-111 347

Find 94 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAAGCTGTGTTAATTTA+AGG 0.096130 1:-32077821 MsG0180002070.01.T01:three_prime_UTR
TCATTCAGTACATAAGATTT+TGG 0.141825 1:-32078043 MsG0180002070.01.T01:three_prime_UTR
AGAATATTAATGATCATTAT+TGG 0.175111 1:-32082051 MsG0180002070.01.T01:CDS
TATTATTTCCAGTCGGTTTC+AGG 0.202322 1:-32079052 MsG0180002070.01.T01:intron
ATCATCTTGACCAGTCAATT+TGG 0.278539 1:-32078253 MsG0180002070.01.T01:three_prime_UTR
CTTTGGAGACCCTTTCTTCT+TGG 0.286596 1:-32080529 MsG0180002070.01.T01:CDS
TAGGCTGTGGTTTAGGTTGC+TGG 0.297497 1:+32083879 None:intergenic
ATGTGCAGGTTGTTCGCTTT+AGG 0.310881 1:-32084147 MsG0180002070.01.T01:intron
TTTGTTTAAATCACTATTCA+AGG 0.340502 1:+32078116 None:intergenic
CTGATAATATATTACCTGAT+TGG 0.359026 1:+32078805 None:intergenic
TCAAAGAATGAAGGAACATC+TGG 0.402453 1:+32086402 None:intergenic
AAGACTGAACTCATCTTCCT+TGG 0.405749 1:+32084111 None:intergenic
AGTACTGGATATTCCTCTTC+CGG 0.405994 1:-32083644 MsG0180002070.01.T01:CDS
ATCATTTAAACCAAGATGTT+GGG 0.406632 1:+32083940 None:intergenic
TCCTGATGCGGAACTTAGAT+TGG 0.416213 1:-32083011 MsG0180002070.01.T01:CDS
TACTTGATAGGCTGTGGTTT+AGG 0.419413 1:+32083872 None:intergenic
TTTAGCTGATGTCAAATTGC+GGG 0.427811 1:-32080487 MsG0180002070.01.T01:CDS
CACTTTGCTTTAGTTGGAGA+TGG 0.428252 1:-32077941 MsG0180002070.01.T01:three_prime_UTR
ACCAATCTAAGTTCCGCATC+AGG 0.434745 1:+32083010 None:intergenic
TCTATATATATGTTTCCTAC+AGG 0.436437 1:-32077896 MsG0180002070.01.T01:three_prime_UTR
TATCAGCATGTTCAGAACTT+TGG 0.437054 1:-32080546 MsG0180002070.01.T01:intron
AAGATCATATACAGCCAATC+AGG 0.438368 1:-32078819 MsG0180002070.01.T01:intron
GTGTAGAGAAGGGACATATA+TGG 0.439109 1:-32078890 MsG0180002070.01.T01:intron
GAGATGGCGCTTCGAGTTGT+TGG 0.439227 1:-32077925 MsG0180002070.01.T01:three_prime_UTR
TGCACATATTCAAAGAATGA+AGG 0.441001 1:+32086393 None:intergenic
GATCATTTAAACCAAGATGT+TGG 0.445357 1:+32083939 None:intergenic
AGACTGAACTCATCTTCCTT+GGG 0.445842 1:+32084112 None:intergenic
TCCACTCCTCGGTACTTGAT+AGG 0.447422 1:+32083860 None:intergenic
AATCCCTCGATGGGTGAATC+GGG 0.447469 1:+32077966 None:intergenic
AGATGGCGCTTCGAGTTGTT+GGG 0.448937 1:-32077924 MsG0180002070.01.T01:three_prime_UTR
AAATCCCTCGATGGGTGAAT+CGG 0.449190 1:+32077965 None:intergenic
GAAAGAGTCTCCCAACATCT+TGG 0.457657 1:-32083950 MsG0180002070.01.T01:CDS
GCTGTCCATCGCCAGCTGGA+GGG 0.462001 1:+32086439 None:intergenic
TTCTTCTTGGTTATCCGTGA+GGG 0.464212 1:-32080516 MsG0180002070.01.T01:CDS
AAATAATATCTGAATCTTGA+AGG 0.466489 1:+32079067 None:intergenic
TGCTGCTGTCCATCGCCAGC+TGG 0.470315 1:+32086435 None:intergenic
AAGTTTGCATTTGTCTCACT+TGG 0.470391 1:-32079102 MsG0180002070.01.T01:CDS
TGCTGTCCATCGCCAGCTGG+AGG 0.475831 1:+32086438 None:intergenic
AATCTTATGTACTGAATGAC+AGG 0.485959 1:+32078047 None:intergenic
CATGGTAATACCAAATTGAC+TGG 0.494215 1:+32078243 None:intergenic
GACAGTACTAACTTCATCCT+TGG 0.498344 1:+32083576 None:intergenic
TCACGGATAACCAAGAAGAA+AGG 0.501850 1:+32080519 None:intergenic
TATTCTATACTATGAAGTAC+TGG 0.503709 1:-32083659 MsG0180002070.01.T01:CDS
AGGCTGTGGTTTAGGTTGCT+GGG 0.507211 1:+32083880 None:intergenic
GAGAAAGCTTCTACAGCAGC+TGG 0.508745 1:+32078219 None:intergenic
TGAAATTACCTGAAACCGAC+TGG 0.510922 1:+32079044 None:intergenic
CTGTCCATCGCCAGCTGGAG+GGG 0.511522 1:+32086440 None:intergenic
CCTCGGTACTTGATAGGCTG+TGG 0.514217 1:+32083866 None:intergenic
TTTCAGAAGTCCCCTCCAGC+TGG 0.515119 1:-32086450 MsG0180002070.01.T01:CDS
GGATCAATTGTCTGACATGC+TGG 0.517533 1:-32083840 MsG0180002070.01.T01:CDS
GGCTATACTCAGCACATCCT+AGG 0.522478 1:+32078137 None:intergenic
AAGTCCCCTCCAGCTGGCGA+TGG 0.524459 1:-32086444 MsG0180002070.01.T01:CDS
CATGCTGGTTCACTACAATC+AGG 0.525999 1:-32083825 MsG0180002070.01.T01:intron
GCTTCTACAGCAGCTGGACA+TGG 0.526069 1:+32078225 None:intergenic
CACGGATAACCAAGAAGAAA+GGG 0.528312 1:+32080520 None:intergenic
GGCGCATGGGAGCAATACCT+TGG 0.531165 1:-32078869 MsG0180002070.01.T01:CDS
CTTCATCCTTGGCATCATGA+TGG 0.536314 1:+32083587 None:intergenic
CTGAACACCTAAAATTGCTC+CGG 0.537720 1:+32078087 None:intergenic
CCGGAAGAAGAGAAAAGCCT+TGG 0.537812 1:-32080772 MsG0180002070.01.T01:CDS
TGCTTTCCATCATGATGCCA+AGG 0.543330 1:-32083593 MsG0180002070.01.T01:CDS
AAAGCCTTGGCCCTCACGAT+CGG 0.547788 1:-32080759 MsG0180002070.01.T01:CDS
TGTATAGAAAGTATAGGCAT+AGG 0.553968 1:-32078011 MsG0180002070.01.T01:three_prime_UTR
GAAGGGACATATATGGCGCA+TGG 0.556422 1:-32078883 MsG0180002070.01.T01:CDS
CTATATATATGTTTCCTACA+GGG 0.571209 1:-32077895 MsG0180002070.01.T01:three_prime_UTR
TCTGAATCTTGAAGGTACTC+AGG 0.573337 1:+32079075 None:intergenic
CAAAGTGAAAATCCCTCGAT+GGG 0.576858 1:+32077957 None:intergenic
AATTAATGATCTAAAATCAA+AGG 0.578639 1:-32083430 MsG0180002070.01.T01:intron
TTTCTTCTTGGTTATCCGTG+AGG 0.579843 1:-32080517 MsG0180002070.01.T01:CDS
GCAAAGTGAAAATCCCTCGA+TGG 0.581474 1:+32077956 None:intergenic
CTGTAGAAGCTTTCTCGTGG+TGG 0.583247 1:-32078212 MsG0180002070.01.T01:three_prime_UTR
ACATGTATCATCCGATCGTG+AGG 0.587253 1:+32080748 None:intergenic
GAAGTTGCAAGTTCCAAATG+AGG 0.588855 1:-32080457 MsG0180002070.01.T01:CDS
TCATCCGATCGTGAGGGCCA+AGG 0.590873 1:+32080755 None:intergenic
TGTCAGTGTGCTCCAGTCCA+AGG 0.594299 1:+32078852 None:intergenic
AGACACTGCTCAAAATCAGA+TGG 0.603971 1:-32080710 MsG0180002070.01.T01:intron
ATGGGAGCAATACCTTGGAC+TGG 0.606579 1:-32078864 MsG0180002070.01.T01:CDS
AAGGGACATATATGGCGCAT+GGG 0.608106 1:-32078882 MsG0180002070.01.T01:CDS
GCCTATCAAGTACCGAGGAG+TGG 0.608291 1:-32083861 MsG0180002070.01.T01:CDS
TTGGACATTACGAGCAGAGG+AGG 0.609951 1:-32082032 MsG0180002070.01.T01:intron
ATTCAGATATTATTTCCAGT+CGG 0.612576 1:-32079059 MsG0180002070.01.T01:CDS
TTATTGGACATTACGAGCAG+AGG 0.613030 1:-32082035 MsG0180002070.01.T01:CDS
CTTTAGCTGATGTCAAATTG+CGG 0.620059 1:-32080488 MsG0180002070.01.T01:CDS
CTTTACAAGTTAGACCCTGT+AGG 0.624903 1:+32077881 None:intergenic
CAGCTAAAGTCTCACCCTCA+CGG 0.627905 1:+32080502 None:intergenic
CATGTATCATCCGATCGTGA+GGG 0.628501 1:+32080749 None:intergenic
TTGCCCGATTCACCCATCGA+GGG 0.631328 1:-32077969 MsG0180002070.01.T01:three_prime_UTR
TGATTTAAACAAATTTACAC+CGG 0.641387 1:-32078106 MsG0180002070.01.T01:three_prime_UTR
CAGACAATTGATCCACTCCT+CGG 0.649064 1:+32083849 None:intergenic
AGATTTATCACATCCTGATG+CGG 0.653603 1:-32083023 MsG0180002070.01.T01:CDS
ATTTAATCACAAGATCTACA+AGG 0.653653 1:-32082981 MsG0180002070.01.T01:intron
CTGCTGTAGAAGCTTTCTCG+TGG 0.670663 1:-32078215 MsG0180002070.01.T01:three_prime_UTR
ATTGCCCGATTCACCCATCG+AGG 0.672183 1:-32077970 MsG0180002070.01.T01:three_prime_UTR
ATTACAGAAGCACAGTACTG+TGG 0.712888 1:-32083460 MsG0180002070.01.T01:CDS
CCACAGCCTATCAAGTACCG+AGG 0.734770 1:-32083866 MsG0180002070.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATCAAAATATAATACT+AGG + Chr1:32081017-32081036 None:intergenic 10.0%
!! AATAATACTTTATAAAGTAA+TGG - Chr1:32078571-32078590 MsG0180002070.01.T01:intron 10.0%
!!! ACTATTATAAAAATTAGTTT+TGG - Chr1:32083353-32083372 MsG0180002070.01.T01:intron 10.0%
!!! TATGTACTATTTATTTTAAT+TGG - Chr1:32077950-32077969 MsG0180002070.01.T01:three_prime_UTR 10.0%
!!! TTATTGATTATAAATTTGTA+GGG - Chr1:32078446-32078465 MsG0180002070.01.T01:intron 10.0%
!! AAAAAACTAAAACTTGTAAA+AGG + Chr1:32078223-32078242 None:intergenic 15.0%
!! AGAATATTAATGATCATTAT+TGG - Chr1:32082258-32082277 MsG0180002070.01.T01:intron 15.0%
!! AGAATTAAAAACAGTTAAAT+AGG + Chr1:32083922-32083941 None:intergenic 15.0%
!! AGCAAATTAATTAATTGAAA+AGG + Chr1:32080139-32080158 None:intergenic 15.0%
!! ATTTAATATACTAATACACT+TGG - Chr1:32084271-32084290 MsG0180002070.01.T01:intron 15.0%
!! GTAATAACATAAATATTGTT+TGG - Chr1:32085394-32085413 MsG0180002070.01.T01:intron 15.0%
!! TAAAACCATTATAAATAGAA+GGG - Chr1:32079922-32079941 MsG0180002070.01.T01:intron 15.0%
!! TCAAAAAAAAAAATTGATCT+TGG + Chr1:32084312-32084331 None:intergenic 15.0%
!! TTAAAAGAATTTACGAATAT+AGG + Chr1:32079218-32079237 None:intergenic 15.0%
!! TTATTGTATGTAACTTAATA+CGG - Chr1:32084657-32084676 MsG0180002070.01.T01:intron 15.0%
!!! AAAAACTAAAAAAGAGTTTT+TGG - Chr1:32078330-32078349 MsG0180002070.01.T01:intron 15.0%
!!! AAAACTAAAAAAGAGTTTTT+GGG - Chr1:32078331-32078350 MsG0180002070.01.T01:intron 15.0%
!!! AACTTGTTTTTATTTTTAGA+TGG + Chr1:32083020-32083039 None:intergenic 15.0%
!!! AATTAATGATCTAAAATCAA+AGG - Chr1:32080879-32080898 MsG0180002070.01.T01:intron 15.0%
!!! ACTTGTTTTTATTTTTAGAT+GGG + Chr1:32083019-32083038 None:intergenic 15.0%
!!! ATCATATTTGTTTTTTAGAT+TGG + Chr1:32082762-32082781 None:intergenic 15.0%
!!! ATTAAATTTTCTAATTGTGT+CGG + Chr1:32084258-32084277 None:intergenic 15.0%
!!! GTTAGTTTACAATATAATAA+TGG - Chr1:32085890-32085909 MsG0180002070.01.T01:intron 15.0%
!!! GTTATTGATTATAAATTTGT+AGG - Chr1:32078445-32078464 MsG0180002070.01.T01:intron 15.0%
!!! GTTTTGAATTTTTTAGTTTT+GGG + Chr1:32078249-32078268 None:intergenic 15.0%
!!! TCATATTTGTTTTTTAGATT+GGG + Chr1:32082761-32082780 None:intergenic 15.0%
!!! TGTATTTTTAGATAAAAGTA+AGG - Chr1:32085612-32085631 MsG0180002070.01.T01:intron 15.0%
!!! TGTTTTGAATTTTTTAGTTT+TGG + Chr1:32078250-32078269 None:intergenic 15.0%
!!! TTTTATTTGATTTTATGTCT+AGG - Chr1:32080620-32080639 MsG0180002070.01.T01:intron 15.0%
!!! TTTTGAATTTTTTAGTTTTG+GGG + Chr1:32078248-32078267 None:intergenic 15.0%
!!! TTTTTTACTTCAAATTCAAA+TGG + Chr1:32084728-32084747 None:intergenic 15.0%
!! AAAAATACTCATCTAAGTAT+TGG + Chr1:32080989-32081008 None:intergenic 20.0%
!! AAACAAAAACTATTTCAAAC+AGG + Chr1:32078158-32078177 None:intergenic 20.0%
!! AAATAATATCTGAATCTTGA+AGG + Chr1:32085245-32085264 None:intergenic 20.0%
!! AAATTCAAAATCAAGTAAGA+TGG - Chr1:32081852-32081871 MsG0180002070.01.T01:intron 20.0%
!! AATAAATAGTACATACTTGA+CGG + Chr1:32077945-32077964 None:intergenic 20.0%
!! AATATAAAAACCTAATAGTC+TGG - Chr1:32082970-32082989 MsG0180002070.01.T01:intron 20.0%
!! AATTCAAAATCAAGTAAGAT+GGG - Chr1:32081853-32081872 MsG0180002070.01.T01:intron 20.0%
!! AATTGAGAAATAATCATAAC+AGG + Chr1:32085976-32085995 None:intergenic 20.0%
!! AGAATAAATATACAAGTGAT+TGG - Chr1:32078405-32078424 MsG0180002070.01.T01:intron 20.0%
!! ATCAAAATAATTAACGATCA+AGG - Chr1:32083976-32083995 MsG0180002070.01.T01:CDS 20.0%
!! ATCAGAGAAAAAGAAATTAT+AGG + Chr1:32077976-32077995 None:intergenic 20.0%
!! ATCATAGATGACAATATTTA+GGG - Chr1:32083145-32083164 MsG0180002070.01.T01:intron 20.0%
!! ATGATGTTTAATCATTACAA+AGG + Chr1:32080056-32080075 None:intergenic 20.0%
!! CAAAAGACAATCTTTATAAT+AGG + Chr1:32078700-32078719 None:intergenic 20.0%
!! CAATATAATAATGGCAATAA+TGG - Chr1:32085899-32085918 MsG0180002070.01.T01:intron 20.0%
!! CACAACAATTTATATAGATT+GGG - Chr1:32084543-32084562 MsG0180002070.01.T01:intron 20.0%
!! CTAGGAAGTTATAAAATTAA+AGG + Chr1:32079826-32079845 None:intergenic 20.0%
!! CTGGAATTAATTTCATTTAT+TGG - Chr1:32085941-32085960 MsG0180002070.01.T01:intron 20.0%
!! GTAAAACCATTATAAATAGA+AGG - Chr1:32079921-32079940 MsG0180002070.01.T01:intron 20.0%
!! TAAAATTAATCCAGACTATT+AGG + Chr1:32082983-32083002 None:intergenic 20.0%
!! TAAGATTGGATTATAAATTG+TGG - Chr1:32079320-32079339 MsG0180002070.01.T01:intron 20.0%
!! TAATTAATGTAATTGTTGTG+TGG - Chr1:32078070-32078089 MsG0180002070.01.T01:three_prime_UTR 20.0%
!! TATCATAGATGACAATATTT+AGG - Chr1:32083144-32083163 MsG0180002070.01.T01:intron 20.0%
!! TCATATTATACTTCAAACAA+AGG + Chr1:32085543-32085562 None:intergenic 20.0%
!! TGATATAATAACAAAAATGC+TGG + Chr1:32085705-32085724 None:intergenic 20.0%
!! TGATTTAAACAAATTTACAC+CGG - Chr1:32086203-32086222 MsG0180002070.01.T01:intron 20.0%
!! TTCACTATAATAATTGCATT+TGG - Chr1:32082536-32082555 MsG0180002070.01.T01:intron 20.0%
!! TTGAGAAACAAATAAATACT+GGG + Chr1:32078892-32078911 None:intergenic 20.0%
!! TTTAAGCCTCAAAAAAATTA+AGG + Chr1:32086474-32086493 None:intergenic 20.0%
!! TTTGTTTAAATCACTATTCA+AGG + Chr1:32086196-32086215 None:intergenic 20.0%
!!! AGACTATTAGGTTTTTATAT+TGG + Chr1:32082971-32082990 None:intergenic 20.0%
!!! ATAACATTTGAAAGTTTTAG+AGG + Chr1:32083720-32083739 None:intergenic 20.0%
!!! ATCTTACTTGATTTTGAATT+TGG + Chr1:32081853-32081872 None:intergenic 20.0%
!!! ATCTTTTAGAAGTTAGAATA+GGG - Chr1:32078110-32078129 MsG0180002070.01.T01:three_prime_UTR 20.0%
!!! GACTATTAGGTTTTTATATT+GGG + Chr1:32082970-32082989 None:intergenic 20.0%
!!! TAAAGTAAATAACTCTGAAA+AGG + Chr1:32080772-32080791 None:intergenic 20.0%
!!! TATCTTTTAGAAGTTAGAAT+AGG - Chr1:32078109-32078128 MsG0180002070.01.T01:three_prime_UTR 20.0%
!!! TATTTTCTATCTCTTATGAT+GGG - Chr1:32081972-32081991 MsG0180002070.01.T01:intron 20.0%
!!! TGAAAATAATCTTACGTTTT+GGG - Chr1:32080082-32080101 MsG0180002070.01.T01:intron 20.0%
!!! TTATAATTTGAGTTTGACTT+TGG - Chr1:32082649-32082668 MsG0180002070.01.T01:intron 20.0%
!!! TTATTTTCTATCTCTTATGA+TGG - Chr1:32081971-32081990 MsG0180002070.01.T01:intron 20.0%
!!! TTTTCACCTTAATTTTTTTG+AGG - Chr1:32086465-32086484 MsG0180002070.01.T01:CDS 20.0%
!!! TTTTTGCTACAAGTTTTATA+TGG - Chr1:32083494-32083513 MsG0180002070.01.T01:intron 20.0%
! AACAGAACATTAAACATATC+CGG - Chr1:32079177-32079196 MsG0180002070.01.T01:intron 25.0%
! AACTTAATACGGTGATATTT+GGG - Chr1:32084668-32084687 MsG0180002070.01.T01:intron 25.0%
! AACTTTCAAATGTTATGTAC+TGG - Chr1:32083724-32083743 MsG0180002070.01.T01:intron 25.0%
! AATACAATCTATTTCCAATG+GGG - Chr1:32078992-32079011 MsG0180002070.01.T01:intron 25.0%
! AATATACAAGTGATTGGAAA+AGG - Chr1:32078411-32078430 MsG0180002070.01.T01:intron 25.0%
! AATTACAATGTCACTAAGAT+TGG - Chr1:32079306-32079325 MsG0180002070.01.T01:intron 25.0%
! ACACCCTATAAGTTTAATAT+AGG - Chr1:32082456-32082475 MsG0180002070.01.T01:intron 25.0%
! ACACCCTATATTAAACTTAT+AGG + Chr1:32082463-32082482 None:intergenic 25.0%
! ACATATGATTGTAATTTCAC+TGG - Chr1:32085922-32085941 MsG0180002070.01.T01:intron 25.0%
! ACCGAATCATAATATTCAAA+AGG + Chr1:32078958-32078977 None:intergenic 25.0%
! ACTCTTTATAAACTCATATC+AGG + Chr1:32082903-32082922 None:intergenic 25.0%
! AGAATTTAGACTTGAGATAT+TGG - Chr1:32082361-32082380 MsG0180002070.01.T01:intron 25.0%
! AGGTAGTAACAAATGTAATT+TGG + Chr1:32083700-32083719 None:intergenic 25.0%
! ATAAACTCAAGAATAATGTG+TGG + Chr1:32083410-32083429 None:intergenic 25.0%
! ATAAATCTACCTGTTTCAAA+GGG + Chr1:32081274-32081293 None:intergenic 25.0%
! ATATACAAGTGATTGGAAAA+GGG - Chr1:32078412-32078431 MsG0180002070.01.T01:intron 25.0%
! ATCATTTAAACCAAGATGTT+GGG + Chr1:32080372-32080391 None:intergenic 25.0%
! ATTCAGATATTATTTCCAGT+CGG - Chr1:32085250-32085269 MsG0180002070.01.T01:intron 25.0%
! ATTTAATCACAAGATCTACA+AGG - Chr1:32081328-32081347 MsG0180002070.01.T01:intron 25.0%
! CAAATGTAATTTGGTTGAAA+AGG + Chr1:32083691-32083710 None:intergenic 25.0%
! CAATACAATCTATTTCCAAT+GGG - Chr1:32078991-32079010 MsG0180002070.01.T01:intron 25.0%
! CAATCAGGTAATATATTATC+AGG - Chr1:32085505-32085524 MsG0180002070.01.T01:intron 25.0%
! CACCCTATAAGTTTAATATA+GGG - Chr1:32082457-32082476 MsG0180002070.01.T01:intron 25.0%
! CACCCTATATTAAACTTATA+GGG + Chr1:32082462-32082481 None:intergenic 25.0%
! CCGAATCATAATATTCAAAA+GGG + Chr1:32078957-32078976 None:intergenic 25.0%
! CGAAGACAGAAATTATTATT+TGG + Chr1:32079707-32079726 None:intergenic 25.0%
! CTATATATATGTTTCCTACA+GGG - Chr1:32086414-32086433 MsG0180002070.01.T01:CDS 25.0%
! CTGATAATATATTACCTGAT+TGG + Chr1:32085507-32085526 None:intergenic 25.0%
! CTGTCTCATTTAGAAAAAAT+TGG - Chr1:32083320-32083339 MsG0180002070.01.T01:intron 25.0%
! CTTAAAGCTGTGTTAATTTA+AGG - Chr1:32086488-32086507 MsG0180002070.01.T01:CDS 25.0%
! CTTGAGAAACAAATAAATAC+TGG + Chr1:32078893-32078912 None:intergenic 25.0%
! GAAATCATGTTTACTGATAA+TGG + Chr1:32081406-32081425 None:intergenic 25.0%
! GAAGTAATAACAATCAATCT+AGG + Chr1:32079844-32079863 None:intergenic 25.0%
! GAGAATTAGTTAGAAACTTA+GGG - Chr1:32078132-32078151 MsG0180002070.01.T01:three_prime_UTR 25.0%
! GCACAACAATTTATATAGAT+TGG - Chr1:32084542-32084561 MsG0180002070.01.T01:intron 25.0%
! GTAATTACAATAGTAGTTGT+CGG - Chr1:32078646-32078665 MsG0180002070.01.T01:intron 25.0%
! GTATGTTATAGTCAAGTTAT+GGG + Chr1:32078929-32078948 None:intergenic 25.0%
! TAAACTCAAGAATAATGTGT+GGG + Chr1:32083409-32083428 None:intergenic 25.0%
! TAACTTAATACGGTGATATT+TGG - Chr1:32084667-32084686 MsG0180002070.01.T01:intron 25.0%
! TATTATACTTCAAACAAAGG+AGG + Chr1:32085540-32085559 None:intergenic 25.0%
! TATTCTATACTATGAAGTAC+TGG - Chr1:32080650-32080669 MsG0180002070.01.T01:intron 25.0%
! TCACACTAATATATCAAACA+AGG + Chr1:32084849-32084868 None:intergenic 25.0%
! TCTAAACTTTCTCATGTATT+GGG - Chr1:32078529-32078548 MsG0180002070.01.T01:intron 25.0%
! TCTATATATATGTTTCCTAC+AGG - Chr1:32086413-32086432 MsG0180002070.01.T01:CDS 25.0%
! TGAAAAGGACTTCAAATATT+AGG + Chr1:32080124-32080143 None:intergenic 25.0%
! TGATATGAGTTTATAAAGAG+TGG - Chr1:32082902-32082921 MsG0180002070.01.T01:intron 25.0%
! TTATGATATACGTCACAATA+AGG + Chr1:32079045-32079064 None:intergenic 25.0%
! TTCATGGTTAAGTTTATAGT+AGG + Chr1:32078740-32078759 None:intergenic 25.0%
! TTGTAAGTTCAAATCTTAGT+GGG + Chr1:32084130-32084149 None:intergenic 25.0%
! TTGTTTCAATCTTGTATTTC+TGG - Chr1:32085107-32085126 MsG0180002070.01.T01:intron 25.0%
! TTTAATGTGACTGATGATTT+GGG + Chr1:32082407-32082426 None:intergenic 25.0%
! TTTAGCACAATAACACAAAA+AGG + Chr1:32081206-32081225 None:intergenic 25.0%
! TTTGTAAGTTCAAATCTTAG+TGG + Chr1:32084131-32084150 None:intergenic 25.0%
!! AGATTGATTGTTATTACTTC+TGG - Chr1:32079844-32079863 MsG0180002070.01.T01:intron 25.0%
!! CAGTATTTATTTGTTTCTCA+AGG - Chr1:32078891-32078910 MsG0180002070.01.T01:intron 25.0%
!! CATTCAGTACATAAGATTTT+GGG - Chr1:32086267-32086286 MsG0180002070.01.T01:intron 25.0%
!! CCCTTTTGAATATTATGATT+CGG - Chr1:32078954-32078973 MsG0180002070.01.T01:intron 25.0%
!! CTCTAGTTGTAGATTTTTAT+TGG + Chr1:32086026-32086045 None:intergenic 25.0%
!! CTGAAAATAATCTTACGTTT+TGG - Chr1:32080081-32080100 MsG0180002070.01.T01:intron 25.0%
!! TCATTCAGTACATAAGATTT+TGG - Chr1:32086266-32086285 MsG0180002070.01.T01:intron 25.0%
!! TGTTACAAAAAGCTTTGATT+AGG - Chr1:32079428-32079447 MsG0180002070.01.T01:intron 25.0%
!! TTTTCGGTTCATTTTATTCA+AGG + Chr1:32084002-32084021 None:intergenic 25.0%
!! TTTTTAGATGGGATAACTTT+TGG + Chr1:32083008-32083027 None:intergenic 25.0%
!!! ATATATTTTCCCTTTGAAAC+AGG - Chr1:32081262-32081281 MsG0180002070.01.T01:intron 25.0%
!!! ATGATATATCGTTTTGTTGT+TGG - Chr1:32082320-32082339 MsG0180002070.01.T01:intron 25.0%
!!! CATGATTAGACATGTTTTTT+TGG - Chr1:32080948-32080967 MsG0180002070.01.T01:intron 25.0%
!!! TGATATATCGTTTTGTTGTT+GGG - Chr1:32082321-32082340 MsG0180002070.01.T01:intron 25.0%
!!! TTTATTTTCAGTGTGATACT+GGG - Chr1:32084929-32084948 MsG0180002070.01.T01:intron 25.0%
!!! TTTTATTTTCAGTGTGATAC+TGG - Chr1:32084928-32084947 MsG0180002070.01.T01:intron 25.0%
!!! TTTTCATTGGTTCTAAACAA+TGG - Chr1:32082154-32082173 MsG0180002070.01.T01:intron 25.0%
!!! TTTTGAATATTATGATTCGG+TGG - Chr1:32078957-32078976 MsG0180002070.01.T01:intron 25.0%
AAAAGGGAAGTGAATGAATA+AGG + Chr1:32082430-32082449 None:intergenic 30.0%
AAAATAGAGCAGCCATTATT+AGG - Chr1:32085823-32085842 MsG0180002070.01.T01:intron 30.0%
AAACCTGAAGAAATGATCAT+AGG + Chr1:32079022-32079041 None:intergenic 30.0%
AAACTCAAGAATAATGTGTG+GGG + Chr1:32083408-32083427 None:intergenic 30.0%
AACTTCTGTTCTCAACTAAT+TGG - Chr1:32085800-32085819 MsG0180002070.01.T01:intron 30.0%
AATAAATGAATGAGTACTCC+TGG + Chr1:32078773-32078792 None:intergenic 30.0%
AATCAGATGGTTAGACTAAA+TGG - Chr1:32083612-32083631 MsG0180002070.01.T01:CDS 30.0%
AATCTTATGTACTGAATGAC+AGG + Chr1:32086265-32086284 None:intergenic 30.0%
AATTCTTGTTCATCTGATAC+TGG + Chr1:32079076-32079095 None:intergenic 30.0%
ACTTAATACGGTGATATTTG+GGG - Chr1:32084669-32084688 MsG0180002070.01.T01:intron 30.0%
ACTTTCACACTTGATTACTT+TGG - Chr1:32078600-32078619 MsG0180002070.01.T01:intron 30.0%
AGAAACAGATCACAACTAAA+AGG + Chr1:32085314-32085333 None:intergenic 30.0%
AGGAAAAATGTCTATTCATG+CGG - Chr1:32081462-32081481 MsG0180002070.01.T01:intron 30.0%
ATAAAAATTTGAGCGTGTTG+AGG - Chr1:32084754-32084773 MsG0180002070.01.T01:intron 30.0%
ATAAATTGTGGAGAGTTGAA+TGG - Chr1:32079332-32079351 MsG0180002070.01.T01:intron 30.0%
ATAACTCATCCTTACAAAAC+TGG + Chr1:32082737-32082756 None:intergenic 30.0%
ATAGGTATATGGGTATTATG+GGG - Chr1:32081824-32081843 MsG0180002070.01.T01:intron 30.0%
ATATTAGAGCCTATGAATTC+GGG - Chr1:32082780-32082799 MsG0180002070.01.T01:intron 30.0%
ATATTGGAAATGACAGATGA+TGG - Chr1:32082377-32082396 MsG0180002070.01.T01:intron 30.0%
ATGACAAGTATTTAAGCACT+TGG + Chr1:32081949-32081968 None:intergenic 30.0%
ATGCTTATTTAGTGATCACT+AGG + Chr1:32079887-32079906 None:intergenic 30.0%
ATTGTGACGTATATCATAAG+TGG - Chr1:32079046-32079065 MsG0180002070.01.T01:intron 30.0%
ATTTCGAGAAGAATAATGTG+TGG + Chr1:32083470-32083489 None:intergenic 30.0%
CATAATATTCAAAAGGGTCT+GGG + Chr1:32078951-32078970 None:intergenic 30.0%
CATAGTCATTTGAACAACAA+TGG - Chr1:32084217-32084236 MsG0180002070.01.T01:intron 30.0%
CATTATGAATCACAAGTGAA+AGG + Chr1:32079771-32079790 None:intergenic 30.0%
CCAATTATTGTGCCTAATAA+TGG + Chr1:32085838-32085857 None:intergenic 30.0%
CCATTATTAGGCACAATAAT+TGG - Chr1:32085835-32085854 MsG0180002070.01.T01:intron 30.0%
CTAAACTTTCTCATGTATTG+GGG - Chr1:32078530-32078549 MsG0180002070.01.T01:intron 30.0%
CTCTAAACTTTCTCATGTAT+TGG - Chr1:32078528-32078547 MsG0180002070.01.T01:intron 30.0%
CTTTCACTTGTGATTCATAA+TGG - Chr1:32079769-32079788 MsG0180002070.01.T01:intron 30.0%
GAATAAAATGAACCGAAAAG+TGG - Chr1:32084003-32084022 MsG0180002070.01.T01:intron 30.0%
GAGTTATAGATGTAACAACT+AGG + Chr1:32082095-32082114 None:intergenic 30.0%
GATAAATCTACCTGTTTCAA+AGG + Chr1:32081275-32081294 None:intergenic 30.0%
GATAGGTATATGGGTATTAT+GGG - Chr1:32081823-32081842 MsG0180002070.01.T01:intron 30.0%
GATATTAGAGCCTATGAATT+CGG - Chr1:32082779-32082798 MsG0180002070.01.T01:intron 30.0%
GATCATTTAAACCAAGATGT+TGG + Chr1:32080373-32080392 None:intergenic 30.0%
GCAATACAATCTATTTCCAA+TGG - Chr1:32078990-32079009 MsG0180002070.01.T01:intron 30.0%
GCTTTAATTAATAACCGTCA+GGG - Chr1:32081694-32081713 MsG0180002070.01.T01:intron 30.0%
GGAGAATTAGTTAGAAACTT+AGG - Chr1:32078131-32078150 MsG0180002070.01.T01:three_prime_UTR 30.0%
GGTATGTTATAGTCAAGTTA+TGG + Chr1:32078930-32078949 None:intergenic 30.0%
GTATTTATAACGACAATTCC+TGG - Chr1:32079096-32079115 MsG0180002070.01.T01:CDS 30.0%
GTGTGAGATAATTGCTAATA+AGG - Chr1:32082479-32082498 MsG0180002070.01.T01:intron 30.0%
GTTTAATGTGACTGATGATT+TGG + Chr1:32082408-32082427 None:intergenic 30.0%
TAATTATCATCACCTGAACA+GGG + Chr1:32080828-32080847 None:intergenic 30.0%
TATAATTCAACCAATCGTCA+AGG + Chr1:32084363-32084382 None:intergenic 30.0%
TATAGGGTGTGAGATAAAAA+GGG + Chr1:32082446-32082465 None:intergenic 30.0%
TATGCTAGTATAGTTTAGCT+TGG - Chr1:32084153-32084172 MsG0180002070.01.T01:intron 30.0%
TCATAATATTCAAAAGGGTC+TGG + Chr1:32078952-32078971 None:intergenic 30.0%
TCCATATAAAACCAAGTCTT+TGG - Chr1:32079251-32079270 MsG0180002070.01.T01:intron 30.0%
TCTTTCCAGATTGTATTAAC+TGG - Chr1:32079997-32080016 MsG0180002070.01.T01:intron 30.0%
TGAGAAAGTTTAGAGAAAAG+AGG + Chr1:32078523-32078542 None:intergenic 30.0%
TGATAGGTATATGGGTATTA+TGG - Chr1:32081822-32081841 MsG0180002070.01.T01:intron 30.0%
TGCACATATTCAAAGAATGA+AGG + Chr1:32077919-32077938 None:intergenic 30.0%
TGCTTTAATTAATAACCGTC+AGG - Chr1:32081693-32081712 MsG0180002070.01.T01:intron 30.0%
TGTAAGTTCAAATCTTAGTG+GGG + Chr1:32084129-32084148 None:intergenic 30.0%
TGTTAAATACTGTACTGCTT+TGG - Chr1:32083084-32083103 MsG0180002070.01.T01:intron 30.0%
TTAGGAGTTAGGACTAATAA+TGG - Chr1:32078674-32078693 MsG0180002070.01.T01:intron 30.0%
TTATAGGGTGTGAGATAAAA+AGG + Chr1:32082447-32082466 None:intergenic 30.0%
TTGGGGCAAAAATTAAGAAA+AGG - Chr1:32084686-32084705 MsG0180002070.01.T01:intron 30.0%
TTTCCTATGATCATTTCTTC+AGG - Chr1:32079016-32079035 MsG0180002070.01.T01:intron 30.0%
TTTCGAGAAGAATAATGTGT+GGG + Chr1:32083469-32083488 None:intergenic 30.0%
TTTGATTAGGATTGAAAGAG+AGG - Chr1:32079441-32079460 MsG0180002070.01.T01:intron 30.0%
! AATCCGGAAATTTTATGTTG+TGG + Chr1:32084460-32084479 None:intergenic 30.0%
! ATCCGGAAATTTTATGTTGT+GGG + Chr1:32084459-32084478 None:intergenic 30.0%
! ATGACAATATTTAGGGTGAA+GGG - Chr1:32083152-32083171 MsG0180002070.01.T01:intron 30.0%
! ATTTGAGCTCAAGTGAATTT+TGG - Chr1:32084895-32084914 MsG0180002070.01.T01:intron 30.0%
! CATTTTCTTATTAAGCGTAG+TGG + Chr1:32081173-32081192 None:intergenic 30.0%
! GATGTAAGTCTGATTTTAGA+AGG + Chr1:32080395-32080414 None:intergenic 30.0%
! GATTTTCACTTTGCTTTAGT+TGG - Chr1:32086362-32086381 MsG0180002070.01.T01:intron 30.0%
! TAGGATGTGTTTCTATTTAC+CGG + Chr1:32079199-32079218 None:intergenic 30.0%
! TGTATAGAAAGTATAGGCAT+AGG - Chr1:32086298-32086317 MsG0180002070.01.T01:intron 30.0%
! TTATGTGCTTCTGTTTTCAT+TGG - Chr1:32082141-32082160 MsG0180002070.01.T01:intron 30.0%
! TTATTTTCAGTGTGATACTG+GGG - Chr1:32084930-32084949 MsG0180002070.01.T01:intron 30.0%
! TTGGCTGTATATGATCTTTT+TGG + Chr1:32085488-32085507 None:intergenic 30.0%
!! ATTAATTTGCTTTCATGTGC+AGG - Chr1:32080148-32080167 MsG0180002070.01.T01:intron 30.0%
!! GGGTTTTGTATAGAAAGTAT+AGG - Chr1:32086292-32086311 MsG0180002070.01.T01:intron 30.0%
!!! AGTACATAAGATTTTGGGTT+GGG - Chr1:32086272-32086291 MsG0180002070.01.T01:intron 30.0%
!!! GTGTTTTAGTCTATACACTT+GGG - Chr1:32085863-32085882 MsG0180002070.01.T01:intron 30.0%
!!! GTGTTTTTTGACAGAATTAC+AGG - Chr1:32079515-32079534 MsG0180002070.01.T01:intron 30.0%
!!! GTTTTTAGGTTTTGCAATTC+CGG + Chr1:32080687-32080706 None:intergenic 30.0%
!!! TCAAGTGAATTTTGGAACTT+GGG - Chr1:32084903-32084922 MsG0180002070.01.T01:intron 30.0%
!!! TCCAAAGACTTGGTTTTATA+TGG + Chr1:32079255-32079274 None:intergenic 30.0%
!!! TGTGTTTTAGTCTATACACT+TGG - Chr1:32085862-32085881 MsG0180002070.01.T01:intron 30.0%
!!! TGTTTTAGTCTATACACTTG+GGG - Chr1:32085864-32085883 MsG0180002070.01.T01:intron 30.0%
AAACTGACATGTAAGATGAG+AGG + Chr1:32082930-32082949 None:intergenic 35.0%
AAATAACACAAGAGTTGTCC+TGG - Chr1:32079362-32079381 MsG0180002070.01.T01:intron 35.0%
AACAGATCACAACTAAAAGG+TGG + Chr1:32085311-32085330 None:intergenic 35.0%
AAGAGGATAGAATAGTTGCA+AGG + Chr1:32078506-32078525 None:intergenic 35.0%
AAGATCATATACAGCCAATC+AGG - Chr1:32085490-32085509 MsG0180002070.01.T01:intron 35.0%
AAGGATGAAGTTAGTACTGT+CGG - Chr1:32080735-32080754 MsG0180002070.01.T01:CDS 35.0%
AAGTTTGCATTTGTCTCACT+TGG - Chr1:32085207-32085226 MsG0180002070.01.T01:intron 35.0%
ACACAAAACTTCCAAAGACT+TGG + Chr1:32079265-32079284 None:intergenic 35.0%
ACACACATTTAACATGAACG+TGG - Chr1:32085759-32085778 MsG0180002070.01.T01:intron 35.0%
ACATAGTTAAAATCCCGTCA+GGG - Chr1:32081658-32081677 MsG0180002070.01.T01:intron 35.0%
ACCTTCAAAAACTCCTCATT+TGG + Chr1:32083868-32083887 None:intergenic 35.0%
AGATTTATCACATCCTGATG+CGG - Chr1:32081286-32081305 MsG0180002070.01.T01:intron 35.0%
AGGATAACTATTGTGAGAAG+AGG + Chr1:32078203-32078222 None:intergenic 35.0%
ATAGTTAAAGCAGCACCTAA+TGG + Chr1:32081735-32081754 None:intergenic 35.0%
ATATCAAACAAGGACCTTGT+GGG + Chr1:32084839-32084858 None:intergenic 35.0%
ATCATCTTGACCAGTCAATT+TGG - Chr1:32086056-32086075 MsG0180002070.01.T01:intron 35.0%
ATTGTTTGGTTGTGTAGAGA+AGG - Chr1:32085408-32085427 MsG0180002070.01.T01:intron 35.0%
CATGGTAATACCAAATTGAC+TGG + Chr1:32086069-32086088 None:intergenic 35.0%
CTAAAGATCTATGACAGTGA+TGG + Chr1:32078839-32078858 None:intergenic 35.0%
CTAATTATCATCACCTGAAC+AGG + Chr1:32080829-32080848 None:intergenic 35.0%
CTGTGCTATGATAGGTATAT+GGG - Chr1:32081814-32081833 MsG0180002070.01.T01:intron 35.0%
CTTTAGCTGATGTCAAATTG+CGG - Chr1:32083821-32083840 MsG0180002070.01.T01:intron 35.0%
GAATAAATTAACGAGACTCC+TGG + Chr1:32078817-32078836 None:intergenic 35.0%
GATATGAACTACCAGAGATA+TGG + Chr1:32080290-32080309 None:intergenic 35.0%
GATTTGTGGTAAGACTAGAT+GGG + Chr1:32081131-32081150 None:intergenic 35.0%
GCAATCATATCAACCAAACT+TGG - Chr1:32078858-32078877 MsG0180002070.01.T01:CDS 35.0%
GCATGAAGACATAGAAATAG+AGG + Chr1:32078022-32078041 None:intergenic 35.0%
GGAATAGTGATATGTGAGTT+AGG - Chr1:32079470-32079489 MsG0180002070.01.T01:intron 35.0%
GTAAGTTCAAATCTTAGTGG+GGG + Chr1:32084128-32084147 None:intergenic 35.0%
GTGTAATGCAATCTTTAGCA+GGG - Chr1:32079281-32079300 MsG0180002070.01.T01:intron 35.0%
GTTCTGCATATTCAAATTCC+AGG + Chr1:32079117-32079136 None:intergenic 35.0%
TAAGTTCAAATCTTAGTGGG+GGG + Chr1:32084127-32084146 None:intergenic 35.0%
TAATGTTCTGCTCATTCAGA+CGG - Chr1:32079620-32079639 MsG0180002070.01.T01:intron 35.0%
TAATTAATAACCGTCAGGGA+CGG - Chr1:32081698-32081717 MsG0180002070.01.T01:intron 35.0%
TAGTAGTTGTCGGAATAGTT+AGG - Chr1:32078656-32078675 MsG0180002070.01.T01:intron 35.0%
TATATCAAACAAGGACCTTG+TGG + Chr1:32084840-32084859 None:intergenic 35.0%
TATCAGCATGTTCAGAACTT+TGG - Chr1:32083763-32083782 MsG0180002070.01.T01:intron 35.0%
TATGTGTCATACGATACAAG+TGG + Chr1:32084598-32084617 None:intergenic 35.0%
TATTTAGTGATCACTAGGCA+AGG + Chr1:32079882-32079901 None:intergenic 35.0%
TCAAAGAATGAAGGAACATC+TGG + Chr1:32077910-32077929 None:intergenic 35.0%
TCACGCCCTTCTATTTATAA+TGG + Chr1:32079930-32079949 None:intergenic 35.0%
TCATACATTACAGTCAGCTA+TGG + Chr1:32081067-32081086 None:intergenic 35.0%
TCTTTATCCTATGTGGAACT+CGG + Chr1:32082875-32082894 None:intergenic 35.0%
TGTGTAATGCAATCTTTAGC+AGG - Chr1:32079280-32079299 MsG0180002070.01.T01:intron 35.0%
TGTGTGTGGTGAATTCAATT+TGG - Chr1:32079401-32079420 MsG0180002070.01.T01:intron 35.0%
TGTTAAATGTGTGTCTTGCA+TGG + Chr1:32085753-32085772 None:intergenic 35.0%
TGTTAACTGTACCATATCTC+TGG - Chr1:32080276-32080295 MsG0180002070.01.T01:intron 35.0%
TTAATTAAAGCAGCACCTAC+TGG + Chr1:32081685-32081704 None:intergenic 35.0%
TTCGAGAAGAATAATGTGTG+GGG + Chr1:32083468-32083487 None:intergenic 35.0%
TTGTTTGGTTGTGTAGAGAA+GGG - Chr1:32085409-32085428 MsG0180002070.01.T01:intron 35.0%
TTTAGCTGATGTCAAATTGC+GGG - Chr1:32083822-32083841 MsG0180002070.01.T01:intron 35.0%
! AAGCAATCTTGAGCGTTTTT+AGG + Chr1:32080701-32080720 None:intergenic 35.0%
! ATAAACCCACAAGTTGAAAG+TGG + Chr1:32082633-32082652 None:intergenic 35.0%
! ATTTACACCGGAGCAATTTT+AGG - Chr1:32086215-32086234 MsG0180002070.01.T01:intron 35.0%
! ATTTGAAGCAGTGATGAATC+CGG + Chr1:32084476-32084495 None:intergenic 35.0%
! GATGACAATATTTAGGGTGA+AGG - Chr1:32083151-32083170 MsG0180002070.01.T01:intron 35.0%
! GCAGTTGCAAATAAGCTTTT+AGG - Chr1:32085129-32085148 MsG0180002070.01.T01:intron 35.0%
! GGTCTTATCTTTATCCTATG+TGG + Chr1:32082882-32082901 None:intergenic 35.0%
! TATTATTTCCAGTCGGTTTC+AGG - Chr1:32085257-32085276 MsG0180002070.01.T01:intron 35.0%
! TCAAATGTTATGTACTGGTG+TGG - Chr1:32083729-32083748 MsG0180002070.01.T01:intron 35.0%
! TCCAAATGAGGAGTTTTTGA+AGG - Chr1:32083864-32083883 MsG0180002070.01.T01:CDS 35.0%
! TCCGGAAATTTTATGTTGTG+GGG + Chr1:32084458-32084477 None:intergenic 35.0%
!! AAGGACTTCTAGAATCCAAA+CGG + Chr1:32079734-32079753 None:intergenic 35.0%
!! AATTTCCTCTGAAACTGCAA+AGG + Chr1:32082681-32082700 None:intergenic 35.0%
!! ACTCATCTAAGTATTGGACT+AGG + Chr1:32080983-32081002 None:intergenic 35.0%
!! CAAAAGCATTAGAGAACATG+GGG + Chr1:32082514-32082533 None:intergenic 35.0%
!! CAGTACATAAGATTTTGGGT+TGG - Chr1:32086271-32086290 MsG0180002070.01.T01:intron 35.0%
!! CCAAAAGCATTAGAGAACAT+GGG + Chr1:32082515-32082534 None:intergenic 35.0%
!! GAAGCATTTTCTATATGCTG+TGG - Chr1:32084966-32084985 MsG0180002070.01.T01:intron 35.0%
!! GACGTGTCTTTTGATTCTTT+TGG - Chr1:32079646-32079665 MsG0180002070.01.T01:intron 35.0%
!! GAGGATTTTAGGAACAAACA+TGG - Chr1:32084773-32084792 MsG0180002070.01.T01:intron 35.0%
!! TACTGATAATGGCTCAATGT+TGG + Chr1:32081395-32081414 None:intergenic 35.0%
!! TGAGAACAGAAGTTTTGTGA+GGG + Chr1:32085794-32085813 None:intergenic 35.0%
!! TTGAGAACAGAAGTTTTGTG+AGG + Chr1:32085795-32085814 None:intergenic 35.0%
!!! CATTTTTTTACCAGTCCTTG+AGG - Chr1:32079670-32079689 MsG0180002070.01.T01:intron 35.0%
!!! CTCAAGTGAATTTTGGAACT+TGG - Chr1:32084902-32084921 MsG0180002070.01.T01:intron 35.0%
!!! GATTTTAACTATGTCCCTTG+AGG + Chr1:32081652-32081671 None:intergenic 35.0%
!!! TTTTGGGAAGTGTTTCAAAC+AGG - Chr1:32078347-32078366 MsG0180002070.01.T01:intron 35.0%
AAAGTGGCAAGTGTCAGATT+GGG - Chr1:32081542-32081561 MsG0180002070.01.T01:intron 40.0%
AAATGCAAACTTCCACTGCA+GGG + Chr1:32085199-32085218 None:intergenic 40.0%
AAGACTGAACTCATCTTCCT+TGG + Chr1:32080201-32080220 None:intergenic 40.0%
AAGGTGGAATTAGAGAGCAA+AGG + Chr1:32085295-32085314 None:intergenic 40.0%
AATGGACGTAAACCAGGTTT+GGG - Chr1:32080567-32080586 MsG0180002070.01.T01:intron 40.0%
AATGTGTGTCTTGCATGGTA+AGG + Chr1:32085748-32085767 None:intergenic 40.0%
ACAAAAGCTAGCTATCAAGG+GGG + Chr1:32081915-32081934 None:intergenic 40.0%
ACAAGTGATTGGAAAAGGGA+GGG - Chr1:32078416-32078435 MsG0180002070.01.T01:intron 40.0%
ACCATCAACTAGCATACTCT+AGG + Chr1:32081428-32081447 None:intergenic 40.0%
ACGGTTGTGAAATGACCATT+AGG - Chr1:32081717-32081736 MsG0180002070.01.T01:intron 40.0%
ACTTGTGACTGCTGCATTAA+TGG - Chr1:32081227-32081246 MsG0180002070.01.T01:intron 40.0%
AGACACTGCTCAAAATCAGA+TGG - Chr1:32083599-32083618 MsG0180002070.01.T01:CDS 40.0%
AGACTGAACTCATCTTCCTT+GGG + Chr1:32080200-32080219 None:intergenic 40.0%
AGGAACAAACATGGTTGCTT+GGG - Chr1:32084782-32084801 MsG0180002070.01.T01:intron 40.0%
AGGATGTTGTGTTGGATTTG+TGG + Chr1:32081145-32081164 None:intergenic 40.0%
AGGTGGAATTAGAGAGCAAA+GGG + Chr1:32085294-32085313 None:intergenic 40.0%
AGTGGATGTTCATGGAGTTA+GGG - Chr1:32085341-32085360 MsG0180002070.01.T01:intron 40.0%
AGTTTAACCTAGTAGCCTCA+AGG - Chr1:32081634-32081653 MsG0180002070.01.T01:intron 40.0%
ATCAAGTAAGATGGGATGCT+TGG - Chr1:32081861-32081880 MsG0180002070.01.T01:intron 40.0%
ATCACAAGTGAAAGGCAAGA+TGG + Chr1:32079763-32079782 None:intergenic 40.0%
ATGAGTGCTTGTCCCTATTA+GGG + Chr1:32081506-32081525 None:intergenic 40.0%
ATGGGTATGTCAGTTCTCAA+GGG - Chr1:32081791-32081810 MsG0180002070.01.T01:intron 40.0%
ATGGTAAGGGGATAAACACT+TGG + Chr1:32085734-32085753 None:intergenic 40.0%
ATGTGTGTCTTGCATGGTAA+GGG + Chr1:32085747-32085766 None:intergenic 40.0%
CAAAGTGAAAATCCCTCGAT+GGG + Chr1:32086355-32086374 None:intergenic 40.0%
CACAAAAGCTAGCTATCAAG+GGG + Chr1:32081916-32081935 None:intergenic 40.0%
CACATATCCACTTCATGACA+AGG + Chr1:32085567-32085586 None:intergenic 40.0%
CACCAAATCACGTGAGTTAT+AGG - Chr1:32080907-32080926 MsG0180002070.01.T01:intron 40.0%
CACGGATAACCAAGAAGAAA+GGG + Chr1:32083792-32083811 None:intergenic 40.0%
CACTTTGCTTTAGTTGGAGA+TGG - Chr1:32086368-32086387 MsG0180002070.01.T01:intron 40.0%
CAGGTGCAACAAGTTAACTA+CGG + Chr1:32082578-32082597 None:intergenic 40.0%
CCACAAAAGCTAGCTATCAA+GGG + Chr1:32081917-32081936 None:intergenic 40.0%
CCCCCACAACATAAAATTTC+CGG - Chr1:32084454-32084473 MsG0180002070.01.T01:intron 40.0%
CTGAACACCTAAAATTGCTC+CGG + Chr1:32086225-32086244 None:intergenic 40.0%
CTTTACAAGTTAGACCCTGT+AGG + Chr1:32086431-32086450 None:intergenic 40.0%
CTTTATCCTATGTGGAACTC+GGG + Chr1:32082874-32082893 None:intergenic 40.0%
GAAGTGGATATGTGTTGTAG+TGG - Chr1:32085573-32085592 MsG0180002070.01.T01:intron 40.0%
GAAGTTGCAAGTTCCAAATG+AGG - Chr1:32083852-32083871 MsG0180002070.01.T01:CDS 40.0%
GACAGTACTAACTTCATCCT+TGG + Chr1:32080736-32080755 None:intergenic 40.0%
GACATAGTTAAAATCCCGTC+AGG - Chr1:32081657-32081676 MsG0180002070.01.T01:intron 40.0%
GATGATGTCTCAAACACATC+AGG - Chr1:32085046-32085065 MsG0180002070.01.T01:intron 40.0%
GATGGTTCAGTATCTTTACG+AGG - Chr1:32081442-32081461 MsG0180002070.01.T01:intron 40.0%
GCAATCCTAGAGTTGTAAAG+TGG - Chr1:32081526-32081545 MsG0180002070.01.T01:intron 40.0%
GCTGGAAAGAATATCATGTC+TGG + Chr1:32085687-32085706 None:intergenic 40.0%
GCTGTGCTATGATAGGTATA+TGG - Chr1:32081813-32081832 MsG0180002070.01.T01:intron 40.0%
GGATTTGTGGTAAGACTAGA+TGG + Chr1:32081132-32081151 None:intergenic 40.0%
GTGTAGAGAAGGGACATATA+TGG - Chr1:32085419-32085438 MsG0180002070.01.T01:intron 40.0%
GTTTAACCTAGTAGCCTCAA+GGG - Chr1:32081635-32081654 MsG0180002070.01.T01:intron 40.0%
TAAAGTGGCAAGTGTCAGAT+TGG - Chr1:32081541-32081560 MsG0180002070.01.T01:intron 40.0%
TAACCAAGTTATCCCTGTTC+AGG - Chr1:32080813-32080832 MsG0180002070.01.T01:intron 40.0%
TACAAGTGATTGGAAAAGGG+AGG - Chr1:32078415-32078434 MsG0180002070.01.T01:intron 40.0%
TACGATTCATGCTGGAAATC+AGG - Chr1:32084067-32084086 MsG0180002070.01.T01:intron 40.0%
TACTTGATAGGCTGTGGTTT+AGG + Chr1:32080440-32080459 None:intergenic 40.0%
TAGGAACAAACATGGTTGCT+TGG - Chr1:32084781-32084800 MsG0180002070.01.T01:intron 40.0%
TATAGCGCTCCTTCCAAATT+AGG - Chr1:32081603-32081622 MsG0180002070.01.T01:intron 40.0%
TATCTGCTCTGTCATGAACT+AGG - Chr1:32080306-32080325 MsG0180002070.01.T01:intron 40.0%
TCAATAAACCTGCAAGCTTC+TGG + Chr1:32082018-32082037 None:intergenic 40.0%
TCACGGATAACCAAGAAGAA+AGG + Chr1:32083793-32083812 None:intergenic 40.0%
TCCTAGAGTATGCTAGTTGA+TGG - Chr1:32081424-32081443 MsG0180002070.01.T01:intron 40.0%
TCCTAGGCTGAACAGAAAAA+TGG + Chr1:32086159-32086178 None:intergenic 40.0%
TCCTGCTTATTGTGCTGTAA+CGG + Chr1:32083228-32083247 None:intergenic 40.0%
TGAAATTACCTGAAACCGAC+TGG + Chr1:32085268-32085287 None:intergenic 40.0%
TGAATATGCAGAACCAGATG+TGG - Chr1:32079123-32079142 MsG0180002070.01.T01:intron 40.0%
TGAGACCACTTTCAACTTGT+GGG - Chr1:32082625-32082644 MsG0180002070.01.T01:intron 40.0%
TGATCATAGGAAATCCCCAT+TGG + Chr1:32079009-32079028 None:intergenic 40.0%
TGCCTATAACTCACGTGATT+TGG + Chr1:32080912-32080931 None:intergenic 40.0%
TGGTAAGGGGATAAACACTT+GGG + Chr1:32085733-32085752 None:intergenic 40.0%
TGTCGGAATAGTTAGGAGTT+AGG - Chr1:32078663-32078682 MsG0180002070.01.T01:intron 40.0%
TTAACTACGGCGTCATGAAA+AGG + Chr1:32082565-32082584 None:intergenic 40.0%
TTATCAAGTGCCTTGACGAT+TGG - Chr1:32084350-32084369 MsG0180002070.01.T01:intron 40.0%
TTATTGGACATTACGAGCAG+AGG - Chr1:32082274-32082293 MsG0180002070.01.T01:intron 40.0%
TTCTTCTTGGTTATCCGTGA+GGG - Chr1:32083793-32083812 MsG0180002070.01.T01:intron 40.0%
TTGAGACCACTTTCAACTTG+TGG - Chr1:32082624-32082643 MsG0180002070.01.T01:intron 40.0%
TTGGACCAAGTAAAACCTCA+AGG + Chr1:32079688-32079707 None:intergenic 40.0%
TTTCTTCTTGGTTATCCGTG+AGG - Chr1:32083792-32083811 MsG0180002070.01.T01:intron 40.0%
! AGAATCCATGCAGTGTTGAA+TGG - Chr1:32080549-32080568 MsG0180002070.01.T01:intron 40.0%
! AGTACTGGATATTCCTCTTC+CGG - Chr1:32080665-32080684 MsG0180002070.01.T01:intron 40.0%
! ATATGAGCCTTGTCATGAAG+TGG - Chr1:32085557-32085576 MsG0180002070.01.T01:intron 40.0%
! ATTACAGAAGCACAGTACTG+TGG - Chr1:32080849-32080868 MsG0180002070.01.T01:intron 40.0%
! CCCATGTTCTCTAATGCTTT+TGG - Chr1:32082512-32082531 MsG0180002070.01.T01:intron 40.0%
! CCGGAAATTTTATGTTGTGG+GGG + Chr1:32084457-32084476 None:intergenic 40.0%
! GCTGAACAGAAAAATGGACT+TGG + Chr1:32086153-32086172 None:intergenic 40.0%
! TATTAAGCGTAGTGGAGATG+AGG + Chr1:32081165-32081184 None:intergenic 40.0%
! TTGAGCGTGTTGAGGATTTT+AGG - Chr1:32084762-32084781 MsG0180002070.01.T01:intron 40.0%
!! AAAACTGGCTTGTAAGGTGA+GGG + Chr1:32082722-32082741 None:intergenic 40.0%
!! AAGACCAAGCTTTGGAATCT+TGG - Chr1:32078470-32078489 MsG0180002070.01.T01:intron 40.0%
!! ACTTGCCACTTTACAACTCT+AGG + Chr1:32081534-32081553 None:intergenic 40.0%
!! AGCAATTTTAGGTGTTCAGG+AGG - Chr1:32086226-32086245 MsG0180002070.01.T01:intron 40.0%
!! AGGACTTCTAGAATCCAAAC+GGG + Chr1:32079733-32079752 None:intergenic 40.0%
!! CAAGCTTTGGAATCTTGGAA+GGG - Chr1:32078475-32078494 MsG0180002070.01.T01:intron 40.0%
!! CAGTTTTGTGACGATGAGTT+AGG - Chr1:32082944-32082963 MsG0180002070.01.T01:intron 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG + Chr1:32082728-32082747 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG - Chr1:32082725-32082744 MsG0180002070.01.T01:intron 40.0%
!! CTGTGTAGCTAACCACTTTT+CGG + Chr1:32084018-32084037 None:intergenic 40.0%
!! GAGAACAGAAGTTTTGTGAG+GGG + Chr1:32085793-32085812 None:intergenic 40.0%
!! GCCAAAAGCATTAGAGAACA+TGG + Chr1:32082516-32082535 None:intergenic 40.0%
!! GGTTGTTCGCTTTAGGTTTT+TGG - Chr1:32080169-32080188 MsG0180002070.01.T01:intron 40.0%
!! TAGGTTTTTGGAGAAACCCA+AGG - Chr1:32080181-32080200 MsG0180002070.01.T01:intron 40.0%
!! TCCATTTTTCTGTTCAGCCT+AGG - Chr1:32086155-32086174 MsG0180002070.01.T01:intron 40.0%
!! TCTGAATCTTGAAGGTACTC+AGG + Chr1:32085237-32085256 None:intergenic 40.0%
!!! CCTTGATAGCTAGCTTTTGT+GGG - Chr1:32081915-32081934 MsG0180002070.01.T01:intron 40.0%
AAACTCGTCGGGTCCTAATT+TGG + Chr1:32081619-32081638 None:intergenic 45.0%
AAACTGCCCTAGATCTTTCC+AGG - Chr1:32078796-32078815 MsG0180002070.01.T01:intron 45.0%
AAATCCCTCGATGGGTGAAT+CGG + Chr1:32086347-32086366 None:intergenic 45.0%
AAGGGACATATATGGCGCAT+GGG - Chr1:32085427-32085446 MsG0180002070.01.T01:intron 45.0%
AAGTAAGATGGGATGCTTGG+TGG - Chr1:32081864-32081883 MsG0180002070.01.T01:intron 45.0%
ACATGTATCATCCGATCGTG+AGG + Chr1:32083564-32083583 None:intergenic 45.0%
ACCAATCTAAGTTCCGCATC+AGG + Chr1:32081302-32081321 None:intergenic 45.0%
ACCATGAAGATTTCCACTCC+AGG - Chr1:32078752-32078771 MsG0180002070.01.T01:intron 45.0%
ACCTACCTATACCAATGTGG+CGG - Chr1:32084095-32084114 MsG0180002070.01.T01:intron 45.0%
AGAACTGACATACCCATGGT+TGG + Chr1:32081788-32081807 None:intergenic 45.0%
AGACTTTCCCTACCTTGGAT+TGG + Chr1:32083186-32083205 None:intergenic 45.0%
AGGTACGATTCATGCTACAC+AGG - Chr1:32084040-32084059 MsG0180002070.01.T01:intron 45.0%
ATGAATGAGTACTCCTGGAG+TGG + Chr1:32078768-32078787 None:intergenic 45.0%
ATGACGTTCCAATCCAAGGT+AGG - Chr1:32083175-32083194 MsG0180002070.01.T01:intron 45.0%
ATGTGCAGGTTGTTCGCTTT+AGG - Chr1:32080162-32080181 MsG0180002070.01.T01:intron 45.0%
CAAATGCAAACTTCCACTGC+AGG + Chr1:32085200-32085219 None:intergenic 45.0%
CAAGCTTCTGGTCATGGAAA+AGG + Chr1:32082006-32082025 None:intergenic 45.0%
CACAAAGACTTTCCCTACCT+TGG + Chr1:32083191-32083210 None:intergenic 45.0%
CAGACAATTGATCCACTCCT+CGG + Chr1:32080463-32080482 None:intergenic 45.0%
CAGACCTACCTATACCAATG+TGG - Chr1:32084092-32084111 MsG0180002070.01.T01:intron 45.0%
CAGCGCCAGTTAATACAATC+TGG + Chr1:32080005-32080024 None:intergenic 45.0%
CATGAGTGCTTGTCCCTATT+AGG + Chr1:32081507-32081526 None:intergenic 45.0%
CATGGGTATGTCAGTTCTCA+AGG - Chr1:32081790-32081809 MsG0180002070.01.T01:intron 45.0%
CATGTATCATCCGATCGTGA+GGG + Chr1:32083563-32083582 None:intergenic 45.0%
CCAAGTAAAACCTCAAGGAC+TGG + Chr1:32079683-32079702 None:intergenic 45.0%
CCCACAAAAGCTAGCTATCA+AGG + Chr1:32081918-32081937 None:intergenic 45.0%
CCTTCCAAGATTCCAAAGCT+TGG + Chr1:32078477-32078496 None:intergenic 45.0%
CTGGGAAAAGATGCCAAGTT+TGG + Chr1:32078874-32078893 None:intergenic 45.0%
CTTCATCCTTGGCATCATGA+TGG + Chr1:32080725-32080744 None:intergenic 45.0%
CTTGAGAACTGACATACCCA+TGG + Chr1:32081792-32081811 None:intergenic 45.0%
CTTGTTGCACCTGGCAAATT+TGG - Chr1:32082585-32082604 MsG0180002070.01.T01:intron 45.0%
CTTTCTCATGTATTGGGGTG+TGG - Chr1:32078535-32078554 MsG0180002070.01.T01:intron 45.0%
GAAAAACCCGAGTTCCACAT+AGG - Chr1:32082865-32082884 MsG0180002070.01.T01:intron 45.0%
GAAAGAGTCTCCCAACATCT+TGG - Chr1:32080359-32080378 MsG0180002070.01.T01:intron 45.0%
GAACAAACATGGTTGCTTGG+GGG - Chr1:32084784-32084803 MsG0180002070.01.T01:intron 45.0%
GAACATGTCATGTCCACATC+TGG + Chr1:32079139-32079158 None:intergenic 45.0%
GAATGGACGTAAACCAGGTT+TGG - Chr1:32080566-32080585 MsG0180002070.01.T01:intron 45.0%
GAGACTCCTGGAAAGATCTA+GGG + Chr1:32078805-32078824 None:intergenic 45.0%
GAGTGGATGTTCATGGAGTT+AGG - Chr1:32085340-32085359 MsG0180002070.01.T01:intron 45.0%
GATGAAGTTAGTACTGTCGG+TGG - Chr1:32080738-32080757 MsG0180002070.01.T01:CDS 45.0%
GCAAAGTGAAAATCCCTCGA+TGG + Chr1:32086356-32086375 None:intergenic 45.0%
GCTACTAGGTTAAACTCGTC+GGG + Chr1:32081630-32081649 None:intergenic 45.0%
GCTCGGTCCTTGGATATAAA+TGG + Chr1:32082813-32082832 None:intergenic 45.0%
GGAACAAACATGGTTGCTTG+GGG - Chr1:32084783-32084802 MsG0180002070.01.T01:intron 45.0%
GGATCAATTGTCTGACATGC+TGG - Chr1:32080469-32080488 MsG0180002070.01.T01:CDS 45.0%
GGCTACTAGGTTAAACTCGT+CGG + Chr1:32081631-32081650 None:intergenic 45.0%
GTGGATGTTCATGGAGTTAG+GGG - Chr1:32085342-32085361 MsG0180002070.01.T01:intron 45.0%
GTGGTAAGACTAGATGGGAT+GGG + Chr1:32081126-32081145 None:intergenic 45.0%
GTGTTGAATGGACGTAAACC+AGG - Chr1:32080561-32080580 MsG0180002070.01.T01:intron 45.0%
TAAGGGGATAAACACTTGGG+AGG + Chr1:32085730-32085749 None:intergenic 45.0%
TACGTCCATTCAACACTGCA+TGG + Chr1:32080557-32080576 None:intergenic 45.0%
TCACCTGAACAGGGATAACT+TGG + Chr1:32080819-32080838 None:intergenic 45.0%
TCCGTTACAGCACAATAAGC+AGG - Chr1:32083224-32083243 MsG0180002070.01.T01:intron 45.0%
TCCTGATGCGGAACTTAGAT+TGG - Chr1:32081298-32081317 MsG0180002070.01.T01:intron 45.0%
TCCTGGAGTGGAAATCTTCA+TGG + Chr1:32078756-32078775 None:intergenic 45.0%
TGACGTTCCAATCCAAGGTA+GGG - Chr1:32083176-32083195 MsG0180002070.01.T01:intron 45.0%
TGAGCTTGAGTGGATGTTCA+TGG - Chr1:32085333-32085352 MsG0180002070.01.T01:intron 45.0%
TGAGTGCTTGTCCCTATTAG+GGG + Chr1:32081505-32081524 None:intergenic 45.0%
TGCTTTCCATCATGATGCCA+AGG - Chr1:32080716-32080735 MsG0180002070.01.T01:CDS 45.0%
TGGAGATGAGGATGTTGTGT+TGG + Chr1:32081153-32081172 None:intergenic 45.0%
TGTAGGGAAAGACCAAGCTT+TGG - Chr1:32078462-32078481 MsG0180002070.01.T01:intron 45.0%
TGTGGTAAGACTAGATGGGA+TGG + Chr1:32081127-32081146 None:intergenic 45.0%
TGTGTGTCTTGCATGGTAAG+GGG + Chr1:32085746-32085765 None:intergenic 45.0%
TTCTGTCTTCGTAACCCGTT+TGG - Chr1:32079716-32079735 MsG0180002070.01.T01:intron 45.0%
! ACCTGGCAAATTTGGTTTCG+GGG - Chr1:32082593-32082612 MsG0180002070.01.T01:intron 45.0%
! AGGTTTTGCAATTCCGGAAG+AGG + Chr1:32080681-32080700 None:intergenic 45.0%
! ATGTACTGGTGTGGTGCTTT+GGG - Chr1:32083738-32083757 MsG0180002070.01.T01:intron 45.0%
! CAAGGCTTTTCTCTTCTTCC+GGG + Chr1:32083539-32083558 None:intergenic 45.0%
! CACCTGGCAAATTTGGTTTC+GGG - Chr1:32082592-32082611 MsG0180002070.01.T01:intron 45.0%
! CCAAGGCTTTTCTCTTCTTC+CGG + Chr1:32083540-32083559 None:intergenic 45.0%
! CCAGTCCTTGAGGTTTTACT+TGG - Chr1:32079680-32079699 MsG0180002070.01.T01:intron 45.0%
! CGAAAAGTGGTTAGCTACAC+AGG - Chr1:32084016-32084035 MsG0180002070.01.T01:intron 45.0%
! CTTTGGAGACCCTTTCTTCT+TGG - Chr1:32083780-32083799 MsG0180002070.01.T01:intron 45.0%
! GCACCTGGCAAATTTGGTTT+CGG - Chr1:32082591-32082610 MsG0180002070.01.T01:intron 45.0%
! GGATTCTAGAAGTCCTTCTG+TGG - Chr1:32079737-32079756 MsG0180002070.01.T01:intron 45.0%
! TATGTACTGGTGTGGTGCTT+TGG - Chr1:32083737-32083756 MsG0180002070.01.T01:intron 45.0%
! TGTTGTAGAGTGCCAACCAT+GGG - Chr1:32081773-32081792 MsG0180002070.01.T01:intron 45.0%
!! ACAGAAGTTTTGTGAGGGGA+AGG + Chr1:32085789-32085808 None:intergenic 45.0%
!! ACCAGGTTTGGGTTTTTCGT+TGG - Chr1:32080578-32080597 MsG0180002070.01.T01:intron 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG + Chr1:32082723-32082742 None:intergenic 45.0%
!! CAGAAGTTTTGTGAGGGGAA+GGG + Chr1:32085788-32085807 None:intergenic 45.0%
!! CATGCTGGTTCACTACAATC+AGG - Chr1:32080484-32080503 MsG0180002070.01.T01:CDS 45.0%
!! CCAAGCTTTGGAATCTTGGA+AGG - Chr1:32078474-32078493 MsG0180002070.01.T01:intron 45.0%
!! CGGAGCAATTTTAGGTGTTC+AGG - Chr1:32086223-32086242 MsG0180002070.01.T01:intron 45.0%
!! CGTAGTTAACTTGTTGCACC+TGG - Chr1:32082576-32082595 MsG0180002070.01.T01:intron 45.0%
!! GATCTGTTTCTGAGCTTGAG+TGG - Chr1:32085323-32085342 MsG0180002070.01.T01:intron 45.0%
!! GGAAAGATCTAGGGCAGTTT+TGG + Chr1:32078796-32078815 None:intergenic 45.0%
!! GTTGTGTTTTGAGCAGCTAG+AGG - Chr1:32077819-32077838 MsG0180002070.01.T01:three_prime_UTR 45.0%
!! TGTTTTGAGCAGCTAGAGGA+TGG - Chr1:32077823-32077842 MsG0180002070.01.T01:three_prime_UTR 45.0%
!!! CCCTTGATAGCTAGCTTTTG+TGG - Chr1:32081914-32081933 MsG0180002070.01.T01:intron 45.0%
!!! GATAGCTAGCTTTTGTGGGT+GGG - Chr1:32081919-32081938 MsG0180002070.01.T01:intron 45.0%
!!! TGATAGCTAGCTTTTGTGGG+TGG - Chr1:32081918-32081937 MsG0180002070.01.T01:intron 45.0%
!!! ATAAAGTATTATTATTATTA+CGG + Chr1:32078564-32078583 None:intergenic 5.0%
!!! ATATTTTTAGATAAAAATTA+TGG - Chr1:32085636-32085655 MsG0180002070.01.T01:intron 5.0%
!!! TATTTTTAAAATTACAATTT+TGG + Chr1:32078277-32078296 None:intergenic 5.0%
AAAGGCAAGATGGCCACAGA+AGG + Chr1:32079753-32079772 None:intergenic 50.0%
AACCTGCAAGCTTCTGGTCA+TGG + Chr1:32082012-32082031 None:intergenic 50.0%
AATCCCTCGATGGGTGAATC+GGG + Chr1:32086346-32086365 None:intergenic 50.0%
ACCCCGAAACCAAATTTGCC+AGG + Chr1:32082597-32082616 None:intergenic 50.0%
ACCTCATGCCCAGCAGTATT+GGG + Chr1:32082835-32082854 None:intergenic 50.0%
ACGATTCATGCTACACAGGC+AGG - Chr1:32084044-32084063 MsG0180002070.01.T01:intron 50.0%
AGCATTAGAGAACATGGGGC+AGG + Chr1:32082510-32082529 None:intergenic 50.0%
AGGGATGACGTTCCAATCCA+AGG - Chr1:32083171-32083190 MsG0180002070.01.T01:intron 50.0%
AGTTGCCGCCACATTGGTAT+AGG + Chr1:32084103-32084122 None:intergenic 50.0%
ATGGGAGCAATACCTTGGAC+TGG - Chr1:32085445-32085464 MsG0180002070.01.T01:intron 50.0%
ATTCACCACACACACCACCA+AGG + Chr1:32079395-32079414 None:intergenic 50.0%
ATTGACATCCACAGCCCACA+AGG - Chr1:32084822-32084841 MsG0180002070.01.T01:intron 50.0%
ATTGGAAAAGGGAGGGTAGG+CGG - Chr1:32078423-32078442 MsG0180002070.01.T01:intron 50.0%
CAGCTAAAGTCTCACCCTCA+CGG + Chr1:32083810-32083829 None:intergenic 50.0%
CATTTCACAACCGTCCCTGA+CGG + Chr1:32081711-32081730 None:intergenic 50.0%
CCGGAAGAAGAGAAAAGCCT+TGG - Chr1:32083537-32083556 MsG0180002070.01.T01:intron 50.0%
CGAGACTCCTGGAAAGATCT+AGG + Chr1:32078806-32078825 None:intergenic 50.0%
CTATGTCCCTTGAGGCTACT+AGG + Chr1:32081644-32081663 None:intergenic 50.0%
CTCAAGGGCTGTGCTATGAT+AGG - Chr1:32081806-32081825 MsG0180002070.01.T01:intron 50.0%
CTGCTGTAGAAGCTTTCTCG+TGG - Chr1:32086094-32086113 MsG0180002070.01.T01:intron 50.0%
CTGTAGAAGCTTTCTCGTGG+TGG - Chr1:32086097-32086116 MsG0180002070.01.T01:intron 50.0%
GAAGGGACATATATGGCGCA+TGG - Chr1:32085426-32085445 MsG0180002070.01.T01:intron 50.0%
GAGAAAGCTTCTACAGCAGC+TGG + Chr1:32086093-32086112 None:intergenic 50.0%
GCCAACGAAAAACCCAAACC+TGG + Chr1:32080582-32080601 None:intergenic 50.0%
GCTTGCCTTTGCAGTTTCAG+AGG - Chr1:32082673-32082692 MsG0180002070.01.T01:intron 50.0%
GGATTGAAAGAGAGGTCTGC+AGG - Chr1:32079449-32079468 MsG0180002070.01.T01:intron 50.0%
GGCTATACTCAGCACATCCT+AGG + Chr1:32086175-32086194 None:intergenic 50.0%
GTCTATTCATGCGGTGTTCC+TGG - Chr1:32081471-32081490 MsG0180002070.01.T01:intron 50.0%
GTGATCACTAGGCAAGGAAG+TGG + Chr1:32079876-32079895 None:intergenic 50.0%
GTGATTGGAAAAGGGAGGGT+AGG - Chr1:32078420-32078439 MsG0180002070.01.T01:intron 50.0%
GTTCTGCTCATTCAGACGGT+TGG - Chr1:32079624-32079643 MsG0180002070.01.T01:intron 50.0%
GTTGTCCTGGAATAGCACCT+TGG - Chr1:32079375-32079394 MsG0180002070.01.T01:intron 50.0%
TCCACTCCTCGGTACTTGAT+AGG + Chr1:32080452-32080471 None:intergenic 50.0%
TCGTCGGGTCCTAATTTGGA+AGG + Chr1:32081615-32081634 None:intergenic 50.0%
TGGAAGCCACACCCCTAATA+GGG - Chr1:32081491-32081510 MsG0180002070.01.T01:intron 50.0%
TGGGCATGAGGTGGTGTATT+GGG - Chr1:32082843-32082862 MsG0180002070.01.T01:intron 50.0%
TTCCATGACCAGAAGCTTGC+AGG - Chr1:32082007-32082026 MsG0180002070.01.T01:intron 50.0%
TTCTCTTCTTCCGGGATCTG+CGG + Chr1:32083531-32083550 None:intergenic 50.0%
TTGGACATTACGAGCAGAGG+AGG - Chr1:32082277-32082296 MsG0180002070.01.T01:intron 50.0%
! AAGTGGTTAGCTACACAGGC+AGG - Chr1:32084020-32084039 MsG0180002070.01.T01:intron 50.0%
! GTGTTGTAGAGTGCCAACCA+TGG - Chr1:32081772-32081791 MsG0180002070.01.T01:intron 50.0%
! TGGCAAATTTGGTTTCGGGG+TGG - Chr1:32082596-32082615 MsG0180002070.01.T01:intron 50.0%
! TTTTTCGTTGCCGCAGATCC+CGG - Chr1:32083518-32083537 MsG0180002070.01.T01:intron 50.0%
!! AGATGGCGCTTCGAGTTGTT+GGG - Chr1:32086385-32086404 MsG0180002070.01.T01:CDS 50.0%
!! AGGCTGTGGTTTAGGTTGCT+GGG + Chr1:32080432-32080451 None:intergenic 50.0%
!! TAGGCTGTGGTTTAGGTTGC+TGG + Chr1:32080433-32080452 None:intergenic 50.0%
AAAGCCTTGGCCCTCACGAT+CGG - Chr1:32083550-32083569 MsG0180002070.01.T01:intron 55.0%
AAATCCCGTCAGGGACCAGT+AGG - Chr1:32081667-32081686 MsG0180002070.01.T01:intron 55.0%
ATTGCCCGATTCACCCATCG+AGG - Chr1:32086339-32086358 MsG0180002070.01.T01:intron 55.0%
CAATACTGCTGGGCATGAGG+TGG - Chr1:32082834-32082853 MsG0180002070.01.T01:intron 55.0%
CACCTCATGCCCAGCAGTAT+TGG + Chr1:32082836-32082855 None:intergenic 55.0%
CAGGCAGGTACGATTCATGC+TGG - Chr1:32084035-32084054 MsG0180002070.01.T01:intron 55.0%
CCTCGGTACTTGATAGGCTG+TGG + Chr1:32080446-32080465 None:intergenic 55.0%
CTGCAACTCGATGTGCATGG+TGG + Chr1:32079581-32079600 None:intergenic 55.0%
CTGGAAGCCACACCCCTAAT+AGG - Chr1:32081490-32081509 MsG0180002070.01.T01:intron 55.0%
CTGGGCATGAGGTGGTGTAT+TGG - Chr1:32082842-32082861 MsG0180002070.01.T01:intron 55.0%
GCCGCCACATTGGTATAGGT+AGG + Chr1:32084099-32084118 None:intergenic 55.0%
GCTTCTACAGCAGCTGGACA+TGG + Chr1:32086087-32086106 None:intergenic 55.0%
GCTTGTCCCTATTAGGGGTG+TGG + Chr1:32081500-32081519 None:intergenic 55.0%
GTCCTGGAATAGCACCTTGG+TGG - Chr1:32079378-32079397 MsG0180002070.01.T01:intron 55.0%
GTGCTGCAACTCGATGTGCA+TGG + Chr1:32079584-32079603 None:intergenic 55.0%
TCTCTGTCTGTTCCCTGCAG+TGG - Chr1:32085184-32085203 MsG0180002070.01.T01:intron 55.0%
TGTCAGTGTGCTCCAGTCCA+AGG + Chr1:32085460-32085479 None:intergenic 55.0%
TTGCCCGATTCACCCATCGA+GGG - Chr1:32086340-32086359 MsG0180002070.01.T01:intron 55.0%
TTTCAGAAGTCCCCTCCAGC+TGG - Chr1:32077859-32077878 MsG0180002070.01.T01:three_prime_UTR 55.0%
! AACAAGGACCTTGTGGGCTG+TGG + Chr1:32084833-32084852 None:intergenic 55.0%
! ATGCCCAGCAGTATTGGGCT+CGG + Chr1:32082830-32082849 None:intergenic 55.0%
! CCACAGCCTATCAAGTACCG+AGG - Chr1:32080443-32080462 MsG0180002070.01.T01:intron 55.0%
! CTATTAGGGGTGTGGCTTCC+AGG + Chr1:32081492-32081511 None:intergenic 55.0%
!! CACCACCAAGGTGCTATTCC+AGG + Chr1:32079383-32079402 None:intergenic 55.0%
!! GAGATGGCGCTTCGAGTTGT+TGG - Chr1:32086384-32086403 MsG0180002070.01.T01:CDS 55.0%
!! GCCTATCAAGTACCGAGGAG+TGG - Chr1:32080448-32080467 MsG0180002070.01.T01:CDS 55.0%
!! TAGCACCTTGGTGGTGTGTG+TGG - Chr1:32079387-32079406 MsG0180002070.01.T01:intron 55.0%
AGCACCTACTGGTCCCTGAC+GGG + Chr1:32081674-32081693 None:intergenic 60.0%
AGGACCGAGCCCAATACTGC+TGG - Chr1:32082823-32082842 MsG0180002070.01.T01:intron 60.0%
CAGCACCTACTGGTCCCTGA+CGG + Chr1:32081675-32081694 None:intergenic 60.0%
GCCCAATACTGCTGGGCATG+AGG - Chr1:32082831-32082850 MsG0180002070.01.T01:intron 60.0%
GGACCGAGCCCAATACTGCT+GGG - Chr1:32082824-32082843 MsG0180002070.01.T01:intron 60.0%
GGCGCATGGGAGCAATACCT+TGG - Chr1:32085440-32085459 MsG0180002070.01.T01:intron 60.0%
TCATCCGATCGTGAGGGCCA+AGG + Chr1:32083557-32083576 None:intergenic 60.0%
! GCAGTATTGGGCTCGGTCCT+TGG + Chr1:32082823-32082842 None:intergenic 60.0%
AAGTCCCCTCCAGCTGGCGA+TGG - Chr1:32077865-32077884 MsG0180002070.01.T01:three_prime_UTR 65.0%
CTGTCCATCGCCAGCTGGAG+GGG + Chr1:32077872-32077891 None:intergenic 65.0%
GCTGTCCATCGCCAGCTGGA+GGG + Chr1:32077873-32077892 None:intergenic 65.0%
TGCTGCTGTCCATCGCCAGC+TGG + Chr1:32077877-32077896 None:intergenic 65.0%
TGCTGTCCATCGCCAGCTGG+AGG + Chr1:32077874-32077893 None:intergenic 65.0%
GGGGGCAGTTGCCGCCACAT+TGG + Chr1:32084109-32084128 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 32077808 32086523 32077808 ID=MsG0180002070.01;Name=MsG0180002070.01
Chr1 mRNA 32077808 32086523 32077808 ID=MsG0180002070.01.T01;Parent=MsG0180002070.01;Name=MsG0180002070.01.T01;_AED=0.47;_eAED=0.47;_QI=0|1|0.91|1|1|1|12|480|360
Chr1 exon 32086383 32086523 32086383 ID=MsG0180002070.01.T01:exon:7198;Parent=MsG0180002070.01.T01
Chr1 exon 32084106 32084161 32084106 ID=MsG0180002070.01.T01:exon:7199;Parent=MsG0180002070.01.T01
Chr1 exon 32083826 32084003 32083826 ID=MsG0180002070.01.T01:exon:7200;Parent=MsG0180002070.01.T01
Chr1 exon 32083588 32083689 32083588 ID=MsG0180002070.01.T01:exon:7201;Parent=MsG0180002070.01.T01
Chr1 exon 32083431 32083496 32083431 ID=MsG0180002070.01.T01:exon:7202;Parent=MsG0180002070.01.T01
Chr1 exon 32082982 32083047 32082982 ID=MsG0180002070.01.T01:exon:7203;Parent=MsG0180002070.01.T01
Chr1 exon 32082033 32082098 32082033 ID=MsG0180002070.01.T01:exon:7204;Parent=MsG0180002070.01.T01
Chr1 exon 32080711 32080797 32080711 ID=MsG0180002070.01.T01:exon:7205;Parent=MsG0180002070.01.T01
Chr1 exon 32080446 32080562 32080446 ID=MsG0180002070.01.T01:exon:7206;Parent=MsG0180002070.01.T01
Chr1 exon 32079053 32079127 32079053 ID=MsG0180002070.01.T01:exon:7207;Parent=MsG0180002070.01.T01
Chr1 exon 32078820 32078906 32078820 ID=MsG0180002070.01.T01:exon:7208;Parent=MsG0180002070.01.T01
Chr1 exon 32077808 32078329 32077808 ID=MsG0180002070.01.T01:exon:7209;Parent=MsG0180002070.01.T01
Chr1 CDS 32086383 32086523 32086383 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32084106 32084161 32084106 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32083826 32084003 32083826 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32083588 32083689 32083588 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32083431 32083496 32083431 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32082982 32083047 32082982 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32082033 32082098 32082033 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32080711 32080797 32080711 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32080446 32080562 32080446 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32079053 32079127 32079053 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32078820 32078906 32078820 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 CDS 32078288 32078329 32078288 ID=MsG0180002070.01.T01:cds;Parent=MsG0180002070.01.T01
Chr1 three_prime_UTR 32077808 32078287 32077808 ID=MsG0180002070.01.T01:three_prime_utr;Parent=MsG0180002070.01.T01
Gene Sequence

>MsG0180002070.01.T01

TTGTTTGCTTGGTTGTGTTTTGAGCAGCTAGAGGATGGTGATATTATTTGCTTTCAGAAGTCCCCTCCAGCTGGCGATGGACAGCAGCAATATTGCTATCCAGATGTTCCTTCATTCTTTGAATATGTGCAAAACCGTCAAGTTGTTCGCTTTAGGTTTTTGGAGAAACCCAAGGAAGATGAGTTCAGTCTTGAGCTGTCAAAGCTTCACACTTATGATGATGTTGTAGAAAGAGTCTCCCAACATCTTGGTTTAAATGATCCTTCTAAAATCAGACTTACATCTCATAACTGCTACTCCCAGCAACCTAAACCACAGCCTATCAAGTACCGAGGAGTGGATCAATTGTCTGACATGCTGGTTCACTACAATCAGGCTTCTGATATTCTATACTATGAAGTACTGGATATTCCTCTTCCGGAATTGCAAAACCTAAAAACGCTCAAGATTGCTTTCCATCATGATGCCAAGGATGAAGTGATGATAATTAGATTACAGAAGCACAGTACTGTGGCAGATGTAATTAATGATCTAAAATCAAAGGTAGATTTATCACATCCTGATGCGGAACTTAGATTGGTTGAAGTATTTAATCACAAGATCTACAAGATTTTTCATGTCAATGAGAAGATTGAGAATATTAATGATCATTATTGGACATTACGAGCAGAGGAGATCCCGGAAGAAGAGAAAAGCCTTGGCCCTCACGATCGGATGATACATGTTTATCATTTTTTGAAAGACACTGCTCAAAATCAGATGCATGTTCAGAACTTTGGAGACCCTTTCTTCTTGGTTATCCGTGAGGGTGAGACTTTAGCTGATGTCAAATTGCGGGTACAAAAGAAGTTGCAAGTTCCAAATGAGGAGTTTTTGAAGTGGAAGTTTGCATTTGTCTCACTTGGACGTCCTGAGTACCTTCAAGATTCAGATATTATTTCCAGTCGGTTTCAGAGAAGGGACATATATGGCGCATGGGAGCAATACCTTGGACTGGAGCACACTGACAATTCACCAAAAAGATCATATACAGCCAATCAGAATCGTCATGCGTTTGATAAACCAATAAAAATCTACAACTAG
Protein sequence

>MsG0180002070.01.T01

LFAWLCFEQLEDGDIICFQKSPPAGDGQQQYCYPDVPSFFEYVQNRQVVRFRFLEKPKEDEFSLELSKLHTYDDVVERVSQHLGLNDPSKIRLTSHNCYSQQPKPQPIKYRGVDQLSDMLVHYNQASDILYYEVLDIPLPELQNLKTLKIAFHHDAKDEVMIIRLQKHSTVADVINDLKSKVDLSHPDAELRLVEVFNHKIYKIFHVNEKIENINDHYWTLRAEEIPEEEKSLGPHDRMIHVYHFLKDTAQNQMHVQNFGDPFFLVIREGETLADVKLRVQKKLQVPNEEFLKWKFAFVSLGRPEYLQDSDIISSRFQRRDIYGAWEQYLGLEHTDNSPKRSYTANQNRHAFDKPIKIYN*