AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002181.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002181.01.T01 MTR_1g049120 76.471 969 97 8 1 869 1 938 0.0 1409
MsG0180002181.01.T01 MTR_4g036445 55.333 600 172 10 73 590 33 618 0.0 605
MsG0180002181.01.T01 MTR_1g072780 52.147 652 206 16 312 869 355 994 0.0 581
MsG0180002181.01.T01 MTR_2g047912 51.756 427 94 11 503 843 272 672 9.58e-111 355
MsG0180002181.01.T01 MTR_2g047912 37.710 297 111 8 18 275 12 273 7.52e-32 133
MsG0180002181.01.T01 MTR_1g066890 31.129 620 314 17 310 840 307 902 1.20e-77 271
MsG0180002181.01.T01 MTR_2g104120 30.885 599 307 15 319 840 258 826 1.35e-74 261
MsG0180002181.01.T01 MTR_2g104980 55.340 103 45 1 319 421 233 334 8.59e-36 142
MsG0180002181.01.T01 MTR_6g005840 28.810 420 247 16 114 502 13 411 5.51e-27 118
MsG0180002181.01.T01 MTR_6g005840 28.381 451 272 16 92 502 14 453 8.45e-27 118
MsG0180002181.01.T01 MTR_6g005960 35.233 193 121 4 315 506 208 397 4.74e-25 111
MsG0180002181.01.T01 MTR_7g113180 32.432 185 109 4 319 494 87 264 1.07e-23 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002181.01.T01 AT5G02950 30.969 578 304 15 313 838 89 623 4.44e-69 241
MsG0180002181.01.T01 AT5G02950 30.969 578 304 15 313 838 89 623 4.44e-69 241
MsG0180002181.01.T01 AT3G09670 52.850 193 89 2 318 509 196 387 6.22e-60 218
MsG0180002181.01.T01 AT3G09670 52.850 193 89 2 318 509 196 387 6.22e-60 218
MsG0180002181.01.T01 AT3G54760 37.013 308 113 8 584 845 470 742 8.73e-45 174
MsG0180002181.01.T01 AT3G54760 37.013 308 113 8 584 845 501 773 1.72e-44 173
MsG0180002181.01.T01 AT5G40340 36.041 197 117 6 319 510 125 317 4.15e-25 112
MsG0180002181.01.T01 AT5G40340 36.041 197 117 6 319 510 125 317 4.46e-25 112
MsG0180002181.01.T01 AT5G27650 33.702 181 112 5 319 494 171 348 1.53e-23 107
MsG0180002181.01.T01 AT3G05430 33.520 179 115 4 319 494 133 310 5.55e-22 102
MsG0180002181.01.T01 AT3G05430 33.520 179 115 4 319 494 133 310 5.80e-22 102
MsG0180002181.01.T01 AT3G27860 32.979 188 109 9 316 497 58 234 6.68e-14 76.3
MsG0180002181.01.T01 AT3G27860 32.979 188 109 9 316 497 58 234 6.68e-14 76.3

Find 182 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTATTTCGTCGCATATTT+TGG 0.097709 1:+34366510 MsG0180002181.01.T01:CDS
CCTCCACAATGTTGTATTTC+TGG 0.135555 1:-34366945 None:intergenic
GCTAAGAAGTTCAACATATT+TGG 0.166046 1:+34368207 MsG0180002181.01.T01:CDS
AACAAAATGTTTAAGCGTTT+TGG 0.179710 1:+34368087 MsG0180002181.01.T01:CDS
GACCATATTAACTTCAAAAT+TGG 0.197232 1:-34368331 None:intergenic
TTCTCTCTCAGATATGGTTT+GGG 0.239508 1:+34366398 MsG0180002181.01.T01:CDS
TCTTCAAATTCAAATGTTTC+AGG 0.243949 1:-34367694 None:intergenic
TTTGTTAAGGTTTGCTTCTA+AGG 0.244285 1:-34368070 None:intergenic
GTCTCAAGACGAGTCGAATA+TGG 0.258530 1:+34366660 MsG0180002181.01.T01:CDS
GGTGATTCTGTTGGGGTAGT+TGG 0.264248 1:+34365461 MsG0180002181.01.T01:CDS
AACAATCGGCGACTTCAATT+TGG 0.266628 1:+34365631 MsG0180002181.01.T01:CDS
TGCAACTCCTGTAGTTAAAA+AGG 0.270750 1:+34367031 MsG0180002181.01.T01:CDS
TACGGCTGGCTTTGATCGTT+TGG 0.305489 1:+34366860 MsG0180002181.01.T01:CDS
TTTCTCTCTCAGATATGGTT+TGG 0.312975 1:+34366397 MsG0180002181.01.T01:CDS
AACAATCGGTGACTTTAATA+TGG 0.317580 1:+34365700 MsG0180002181.01.T01:CDS
GTGACCCAGTTCCAACTATT+GGG 0.320240 1:-34367672 None:intergenic
TGAGTTGGGTAGCGTTGTTT+TGG 0.320522 1:+34365559 MsG0180002181.01.T01:CDS
GGTGACCCAGTTCCAACTAT+TGG 0.324538 1:-34367673 None:intergenic
GACACATCTGATTCATTATC+AGG 0.324654 1:-34367427 None:intergenic
TCAGGTGAAACCAGATTATC+TGG 0.347288 1:-34367175 None:intergenic
ATCATGTCATAGGTGTCTTT+AGG 0.355766 1:-34366702 None:intergenic
AAGATATGAGCGACACATAT+TGG 0.375633 1:+34367713 MsG0180002181.01.T01:CDS
AATCACACTGCAGAGGTTAA+AGG 0.381260 1:+34365971 MsG0180002181.01.T01:CDS
CGGATATATTTGGTATTAAG+AGG 0.384275 1:+34367641 MsG0180002181.01.T01:CDS
TGATTTGTGGTGATTCTGTT+GGG 0.386475 1:+34365453 MsG0180002181.01.T01:CDS
TGCACTGGTTTCTGTTGCAC+TGG 0.388524 1:-34367787 None:intergenic
AGAAGTCACCCATGGTGGCC+TGG 0.392403 1:+34366429 MsG0180002181.01.T01:CDS
AAGATATCTGCTGATTTCAT+TGG 0.392985 1:+34365998 MsG0180002181.01.T01:CDS
AGAGATCGAAAACCATTTCC+TGG 0.398045 1:-34368308 None:intergenic
CCCAACTGATGAGGATGATC+AGG 0.400132 1:+34367453 MsG0180002181.01.T01:CDS
TCACTGCGTCACCTTCTATA+AGG 0.403119 1:+34367353 MsG0180002181.01.T01:CDS
AACCTCTGCAGTGTGATTCA+CGG 0.409327 1:-34365966 None:intergenic
TGTGAGCGGTGTTTCTGCTT+TGG 0.414830 1:+34365868 MsG0180002181.01.T01:CDS
TCTGTTTCAGATTCCTTAAG+TGG 0.417444 1:-34368111 None:intergenic
GAATGCGGCGGCGGTTGAGT+TGG 0.418915 1:+34365544 MsG0180002181.01.T01:CDS
CACATACCACAGACGCATCT+AGG 0.421586 1:-34365415 None:intergenic
AATGCGGCGGCGGTTGAGTT+GGG 0.423511 1:+34365545 MsG0180002181.01.T01:CDS
CTGTAGTTGTGGCTGCTGAT+TGG 0.424377 1:+34367602 MsG0180002181.01.T01:CDS
GAAGTCACCCATGGTGGCCT+GGG 0.429264 1:+34366430 MsG0180002181.01.T01:CDS
ATTCTGTTGGGGTAGTTGGT+GGG 0.439002 1:+34365465 MsG0180002181.01.T01:CDS
TCAAAGTCTCCATCTGCCTT+TGG 0.439286 1:-34367397 None:intergenic
ACAAAGTCATCGTTTAAAAT+CGG 0.439705 1:+34367301 MsG0180002181.01.T01:CDS
GCAACGGCGCATGGCTCCCT+TGG 0.443984 1:-34366188 None:intergenic
CGAGGAGTCAAATGGTGGTC+AGG 0.449458 1:+34366233 MsG0180002181.01.T01:CDS
TGGTCGGACTCCAGATAATC+TGG 0.450902 1:+34367165 MsG0180002181.01.T01:CDS
TTCCATCACGCAACGGCGCA+TGG 0.451672 1:-34366197 None:intergenic
GTGAGAGATGAAGCAGTAGT+TGG 0.452544 1:+34365590 MsG0180002181.01.T01:CDS
CTAGAACACTTCCTTATAGA+AGG 0.452692 1:-34367364 None:intergenic
GCTTTAGCAGGTAGTTCTGT+AGG 0.454456 1:+34365776 MsG0180002181.01.T01:CDS
CACCTGAACATTCCAAGAAA+AGG 0.455137 1:+34367191 MsG0180002181.01.T01:CDS
GATTCTGTTGGGGTAGTTGG+TGG 0.455837 1:+34365464 MsG0180002181.01.T01:CDS
TAGTTCAGAAATAGTTCATC+AGG 0.456384 1:+34366335 MsG0180002181.01.T01:CDS
AGTGTCCGGTTGAGGAATCT+AGG 0.458412 1:+34365492 MsG0180002181.01.T01:CDS
TGCACTGGTTTCTGTTGCGC+TGG 0.460959 1:-34367772 None:intergenic
TATCTTGTGATCTGCGGCCT+CGG 0.467878 1:-34365732 None:intergenic
GTGATTTGTGGTGATTCTGT+TGG 0.468729 1:+34365452 MsG0180002181.01.T01:CDS
TATTGAGACTGAGGAAAACT+TGG 0.469804 1:+34366125 MsG0180002181.01.T01:CDS
AGTTGGTGGGACCGAGTGTC+CGG 0.470210 1:+34365478 MsG0180002181.01.T01:CDS
TCTTAAAGACCACTCTTGCC+CGG 0.475118 1:-34368152 None:intergenic
CTCCATCTGCCTTTGGAGAT+CGG 0.475922 1:-34367390 None:intergenic
AATCGGTGATTGTATTCGTC+GGG 0.480709 1:+34367318 MsG0180002181.01.T01:CDS
GAGTGCTATTAATTGTGCTT+TGG 0.482515 1:+34366632 MsG0180002181.01.T01:CDS
TCTCAAGACGAGTCGAATAT+GGG 0.485338 1:+34366661 MsG0180002181.01.T01:CDS
GCTGCCGAGGCCGCAGTAGT+TGG 0.486116 1:+34365659 MsG0180002181.01.T01:CDS
ACAACCCTAGATTCCTCAAC+CGG 0.488423 1:-34365497 None:intergenic
TCCTGATCATCCTCATCAGT+TGG 0.488623 1:-34367454 None:intergenic
GTTGTAGAATTTGAAGAAGC+CGG 0.488694 1:+34365515 MsG0180002181.01.T01:CDS
TGGGACCGAGTGTCCGGTTG+AGG 0.488906 1:+34365484 MsG0180002181.01.T01:CDS
GCTATCTTCACTTCAGCTTG+TGG 0.491218 1:+34367507 MsG0180002181.01.T01:CDS
GAAGCTTTGAACAGTGCACT+TGG 0.493568 1:-34368264 None:intergenic
CATTTCGGAGTCATCGGCGT+AGG 0.493727 1:-34367233 None:intergenic
TTGTTAAGGTTTGCTTCTAA+GGG 0.496576 1:-34368069 None:intergenic
TGCAACACAAGACCAGGAAA+TGG 0.498131 1:+34368296 MsG0180002181.01.T01:CDS
GGAGTCCGACCATCACCATC+AGG 0.498959 1:-34367154 None:intergenic
AATCGGCGACTTCAATTTGG+TGG 0.502290 1:+34365634 MsG0180002181.01.T01:CDS
CTTTAGCAGGTAGTTCTGTA+GGG 0.504598 1:+34365777 MsG0180002181.01.T01:CDS
ATCTTGCATTTCGGAGTCAT+CGG 0.509912 1:-34367239 None:intergenic
CACCTCCAACTATCACATCA+TGG 0.511288 1:-34365388 None:intergenic
AAACATGCGCTTGTGAAGCC+TGG 0.515535 1:+34366312 MsG0180002181.01.T01:CDS
ATTCCTATGCTCTTCAATTG+TGG 0.519415 1:-34366592 None:intergenic
TTGTAGAATTTGAAGAAGCC+GGG 0.519547 1:+34365516 MsG0180002181.01.T01:CDS
CGGGAGTGAGAATGCGGCGG+CGG 0.520018 1:+34365535 MsG0180002181.01.T01:CDS
CACTTGGAGTGTAATTAAGC+TGG 0.521123 1:-34368248 None:intergenic
AGCCATGCGCCGTTGCGTGA+TGG 0.521303 1:+34366195 MsG0180002181.01.T01:CDS
GCCGCAGTAGTTGGTAGTAC+AGG 0.522140 1:+34365668 MsG0180002181.01.T01:CDS
TCAGAAAAGTATACTCTCCA+AGG 0.523646 1:-34367540 None:intergenic
TAGATGCGTCTGTGGTATGT+GGG 0.523994 1:+34365417 MsG0180002181.01.T01:CDS
GCGACACATATTGGACTGAC+AGG 0.524575 1:+34367722 MsG0180002181.01.T01:CDS
CTATCCGAGTTTCCTACGGC+TGG 0.525255 1:+34366846 MsG0180002181.01.T01:CDS
CCTGATCATCCTCATCAGTT+GGG 0.525465 1:-34367453 None:intergenic
CAATTTGGTGGATGCTGCCG+AGG 0.525640 1:+34365646 MsG0180002181.01.T01:CDS
CGCCGCCGCATTCTCACTCC+CGG 0.525805 1:-34365534 None:intergenic
AAGTTGATAGAGTAAGCAGC+CGG 0.526372 1:+34368133 MsG0180002181.01.T01:CDS
AGCAATGATGATGCTTTAGC+AGG 0.528080 1:+34365764 MsG0180002181.01.T01:CDS
ATTTCGGAGTCATCGGCGTA+GGG 0.529828 1:-34367232 None:intergenic
TTTCAGAAATTCTGTAGTTG+TGG 0.530415 1:+34367591 MsG0180002181.01.T01:CDS
ACATATTCTATAAGATTCAA+AGG 0.532546 1:-34366816 None:intergenic
AGTAAGCAGCCGGGCAAGAG+TGG 0.535181 1:+34368143 MsG0180002181.01.T01:CDS
AAACTAAGAGATAGAAAAGC+CGG 0.536173 1:+34366288 MsG0180002181.01.T01:CDS
CTAGATGCGTCTGTGGTATG+TGG 0.538035 1:+34365416 MsG0180002181.01.T01:CDS
TGCGCCGTTGCGTGATGGAA+AGG 0.540259 1:+34366200 MsG0180002181.01.T01:CDS
GACGGATCAAATATCTGCCC+AGG 0.544596 1:-34366447 None:intergenic
TTTGGAGCTTGTGACTGCTA+AGG 0.547748 1:+34366878 MsG0180002181.01.T01:CDS
TTGGGGACAAAACATTTGCA+TGG 0.547879 1:+34366529 MsG0180002181.01.T01:CDS
ATTTATTATCTTGTGATCTG+CGG 0.548054 1:-34365738 None:intergenic
GTCAGACAGTAGAGAACACC+GGG 0.548651 1:+34366730 MsG0180002181.01.T01:CDS
CTGCCAAAAGCAAAAGAAGA+AGG 0.552516 1:+34366369 MsG0180002181.01.T01:CDS
TCTCTCTCAGATATGGTTTG+GGG 0.553140 1:+34366399 MsG0180002181.01.T01:CDS
AACACTATCCGAGTTTCCTA+CGG 0.556285 1:+34366842 MsG0180002181.01.T01:CDS
GCCCTCTCAGATGCATCTGA+CGG 0.559014 1:-34366465 None:intergenic
CCAGATTCTCCTGATGGTGA+TGG 0.559245 1:+34367145 MsG0180002181.01.T01:intron
AAATCGGTGATTGTATTCGT+CGG 0.559399 1:+34367317 MsG0180002181.01.T01:CDS
ATGACTCCGAAATGCAAGAT+GGG 0.560146 1:+34367242 MsG0180002181.01.T01:CDS
GTGACCCATGATGTGATAGT+TGG 0.562707 1:+34365383 MsG0180002181.01.T01:CDS
TGAACTATTTCTGAACTACC+AGG 0.564289 1:-34366330 None:intergenic
TGACCCAGTTCCAACTATTG+GGG 0.565841 1:-34367671 None:intergenic
ATATCTGCCCAGGCCACCAT+GGG 0.565877 1:-34366437 None:intergenic
GATGACTCCGAAATGCAAGA+TGG 0.571916 1:+34367241 MsG0180002181.01.T01:CDS
AAAGTCAACGAGGAGTCAAA+TGG 0.574642 1:+34366225 MsG0180002181.01.T01:CDS
AGATTCCTCAACCGGACACT+CGG 0.576266 1:-34365489 None:intergenic
CAGAAAAGTATACTCTCCAA+GGG 0.576757 1:-34367539 None:intergenic
ACTTATTTCTTGTTGAACCC+CGG 0.576846 1:-34366748 None:intergenic
GACCGATCTCCAAAGGCAGA+TGG 0.577314 1:+34367388 MsG0180002181.01.T01:CDS
AAAGCCAGCCGTAGGAAACT+CGG 0.577817 1:-34366850 None:intergenic
GTGTCCGGTTGAGGAATCTA+GGG 0.579053 1:+34365493 MsG0180002181.01.T01:CDS
ACCTCCAACTATCACATCAT+GGG 0.579738 1:-34365387 None:intergenic
AATAAGTATCACACATGGGG+TGG 0.580958 1:+34366764 MsG0180002181.01.T01:CDS
ACATACCACAGACGCATCTA+GGG 0.581067 1:-34365414 None:intergenic
CCTTGAAAAGTGCAACTCAA+AGG 0.582951 1:+34365823 MsG0180002181.01.T01:CDS
ACAGTTGTCGAAACAACAAT+CGG 0.583839 1:+34365617 MsG0180002181.01.T01:CDS
TAATATGGTGGATGCTGCCG+AGG 0.584046 1:+34365715 MsG0180002181.01.T01:CDS
GGGACTCCAGATTCTCCTGA+TGG 0.585166 1:+34367139 MsG0180002181.01.T01:intron
TTCTAGTGACCGATCTCCAA+AGG 0.585712 1:+34367381 MsG0180002181.01.T01:CDS
GGTCATAATGAAGTGATTTG+TGG 0.586282 1:+34365440 MsG0180002181.01.T01:CDS
ACAGGTGTCGAAACAACAAT+CGG 0.587845 1:+34365686 MsG0180002181.01.T01:CDS
TGTTGATGCAACACAAGACC+AGG 0.588104 1:+34368290 MsG0180002181.01.T01:CDS
AATATCTGCCCAGGCCACCA+TGG 0.588370 1:-34366438 None:intergenic
TCTCCACAATTGAAGAGCAT+AGG 0.596184 1:+34366589 MsG0180002181.01.T01:CDS
ACTACCAACTACTGCGGCCT+CGG 0.596716 1:-34365663 None:intergenic
AAGCACAATTAATAGCACTC+TGG 0.605736 1:-34366629 None:intergenic
CAAGAAATAAGTATCACACA+TGG 0.606499 1:+34366759 MsG0180002181.01.T01:CDS
AAGAAATAAGTATCACACAT+GGG 0.606954 1:+34366760 MsG0180002181.01.T01:CDS
ACATTGTGGAGGTGTTGACC+CGG 0.610706 1:+34366956 MsG0180002181.01.T01:CDS
ATTCTCCTGATGGTGATGGT+CGG 0.611694 1:+34367149 MsG0180002181.01.T01:CDS
GATTTGTGGTGATTCTGTTG+GGG 0.613739 1:+34365454 MsG0180002181.01.T01:CDS
AATCGGTGACTTTAATATGG+TGG 0.613810 1:+34365703 MsG0180002181.01.T01:CDS
TAAGAAATGTGTAGATGCAG+AGG 0.619624 1:+34368170 MsG0180002181.01.T01:CDS
TCCGTCAGATGCATCTGAGA+GGG 0.624122 1:+34366464 MsG0180002181.01.T01:CDS
AGTTGATAGAGTAAGCAGCC+GGG 0.624544 1:+34368134 MsG0180002181.01.T01:CDS
GACACTCAAGTTACTGACCA+AGG 0.625596 1:+34366171 MsG0180002181.01.T01:CDS
TGAAACCCTAGATGCGTCTG+TGG 0.629685 1:+34365409 MsG0180002181.01.T01:CDS
TGTGTCTCTCCCAACTGATG+AGG 0.631262 1:+34367444 MsG0180002181.01.T01:CDS
AAACGATCAAAGCCAGCCGT+AGG 0.635310 1:-34366858 None:intergenic
ATAGACGGCGACGATCAACA+AGG 0.645880 1:+34365926 MsG0180002181.01.T01:CDS
CTTGTGGCACAAGAACCCCT+TGG 0.646167 1:+34367523 MsG0180002181.01.T01:CDS
GTCGGTGTCTATTGAGACTG+AGG 0.648701 1:+34366116 MsG0180002181.01.T01:CDS
AGATGCGTCTGTGGTATGTG+GGG 0.650145 1:+34365418 MsG0180002181.01.T01:CDS
ATCCGTCAGATGCATCTGAG+AGG 0.653593 1:+34366463 MsG0180002181.01.T01:CDS
TCAACAATCTGATGTACATG+AGG 0.653763 1:+34365895 MsG0180002181.01.T01:CDS
GACCCAGTTCCAACTATTGG+GGG 0.653992 1:-34367670 None:intergenic
ACCCATGATGTGATAGTTGG+AGG 0.654382 1:+34365386 MsG0180002181.01.T01:CDS
TTTAGCAGGTAGTTCTGTAG+GGG 0.655647 1:+34365778 MsG0180002181.01.T01:CDS
AGAAATAAGTATCACACATG+GGG 0.660741 1:+34366761 MsG0180002181.01.T01:CDS
GCAAAGTGAGAAGTCACCCA+TGG 0.661126 1:+34366421 MsG0180002181.01.T01:CDS
AGAAGCCGGGAGTGAGAATG+CGG 0.661274 1:+34365529 MsG0180002181.01.T01:CDS
ACACTCAAGTTACTGACCAA+GGG 0.665022 1:+34366172 MsG0180002181.01.T01:CDS
AGTCAGACAGTAGAGAACAC+CGG 0.667248 1:+34366729 MsG0180002181.01.T01:CDS
CGACACATATTGGACTGACA+GGG 0.669789 1:+34367723 MsG0180002181.01.T01:CDS
CATGAGGAGATACAAATAGA+CGG 0.670281 1:+34365911 MsG0180002181.01.T01:CDS
GTCAACGAGGAGTCAAATGG+TGG 0.673514 1:+34366228 MsG0180002181.01.T01:CDS
AGCCGGGAGTGAGAATGCGG+CGG 0.674067 1:+34365532 MsG0180002181.01.T01:CDS
ACTGACAGGGTCATTGACAA+TGG 0.674175 1:+34367736 MsG0180002181.01.T01:CDS
AAGTGAGAAGTCACCCATGG+TGG 0.677906 1:+34366424 MsG0180002181.01.T01:CDS
AACCGTGAATCACACTGCAG+AGG 0.687880 1:+34365964 MsG0180002181.01.T01:CDS
TAGACGGCGACGATCAACAA+GGG 0.693450 1:+34365927 MsG0180002181.01.T01:CDS
TTGCCAGAAATACAACATTG+TGG 0.702327 1:+34366942 MsG0180002181.01.T01:CDS
GATGCGTCTGTGGTATGTGG+GGG 0.708222 1:+34365419 MsG0180002181.01.T01:CDS
CCAGAAATACAACATTGTGG+AGG 0.718025 1:+34366945 MsG0180002181.01.T01:CDS
AGAAAAGTATACTCTCCAAG+GGG 0.750501 1:-34367538 None:intergenic
ATAGCTGACAACGATGTGAG+CGG 0.753803 1:+34365854 MsG0180002181.01.T01:CDS
ACCTGTACTACCAACTACTG+CGG 0.755652 1:-34365669 None:intergenic
TCAGACAGTAGAGAACACCG+GGG 0.900900 1:+34366731 MsG0180002181.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATATTCTATAAGATTCAA+AGG - Chr1:34366819-34366838 None:intergenic 20.0%
!! ATTGAAAAAGTTAATGAAGT+TGG + Chr1:34366258-34366277 MsG0180002181.01.T01:CDS 20.0%
!! TTGAAAAAGTTAATGAAGTT+GGG + Chr1:34366259-34366278 MsG0180002181.01.T01:CDS 20.0%
! AAAGCGTAAATATAAGTTCA+AGG + Chr1:34367066-34367085 MsG0180002181.01.T01:intron 25.0%
! AAGAAATAAGTATCACACAT+GGG + Chr1:34366760-34366779 MsG0180002181.01.T01:CDS 25.0%
! ATTTATTATCTTGTGATCTG+CGG - Chr1:34365741-34365760 None:intergenic 25.0%
! GACCATATTAACTTCAAAAT+TGG - Chr1:34368334-34368353 None:intergenic 25.0%
! TCTTCAAATTCAAATGTTTC+AGG - Chr1:34367697-34367716 None:intergenic 25.0%
!! AACAAAATGTTTAAGCGTTT+TGG + Chr1:34368087-34368106 MsG0180002181.01.T01:CDS 25.0%
!! AACGCTTAAACATTTTGTTA+AGG - Chr1:34368086-34368105 None:intergenic 25.0%
!! ACAAAGTCATCGTTTAAAAT+CGG + Chr1:34367301-34367320 MsG0180002181.01.T01:CDS 25.0%
!! ACTTATATTTACGCTTTTGA+CGG - Chr1:34367063-34367082 None:intergenic 25.0%
!!! AGAATTGTTTTTCTTGGTAT+AGG - Chr1:34367951-34367970 None:intergenic 25.0%
!!! ATCTAAGCTAAAGCATTTTA+GGG + Chr1:34366560-34366579 MsG0180002181.01.T01:CDS 25.0%
!!! CTCCAATTTTGAAGTTAATA+TGG + Chr1:34368329-34368348 MsG0180002181.01.T01:CDS 25.0%
!!! CTTGCTTTTAATCGTTTTAA+GGG + Chr1:34366909-34366928 MsG0180002181.01.T01:CDS 25.0%
!!! GAATTGTTTTTCTTGGTATA+GGG - Chr1:34367950-34367969 None:intergenic 25.0%
AAACTAAGAGATAGAAAAGC+CGG + Chr1:34366288-34366307 MsG0180002181.01.T01:CDS 30.0%
AACAATCGGTGACTTTAATA+TGG + Chr1:34365700-34365719 MsG0180002181.01.T01:CDS 30.0%
AGAAATAAGTATCACACATG+GGG + Chr1:34366761-34366780 MsG0180002181.01.T01:CDS 30.0%
ATCCATCAAAGAAGGAAAAA+AGG + Chr1:34367098-34367117 MsG0180002181.01.T01:intron 30.0%
CAAGAAATAAGTATCACACA+TGG + Chr1:34366759-34366778 MsG0180002181.01.T01:CDS 30.0%
CATCGTCAACAAAAAATGAA+TGG - Chr1:34366983-34367002 None:intergenic 30.0%
CGGATATATTTGGTATTAAG+AGG + Chr1:34367641-34367660 MsG0180002181.01.T01:CDS 30.0%
GCTAAGAAGTTCAACATATT+TGG + Chr1:34368207-34368226 MsG0180002181.01.T01:CDS 30.0%
TAGTTCAGAAATAGTTCATC+AGG + Chr1:34366335-34366354 MsG0180002181.01.T01:CDS 30.0%
TCAACAAAAAATGAATGGTC+CGG - Chr1:34366978-34366997 None:intergenic 30.0%
TTTCAGAAATTCTGTAGTTG+TGG + Chr1:34367591-34367610 MsG0180002181.01.T01:CDS 30.0%
! ATTTTACGCACGGATATATT+TGG + Chr1:34367631-34367650 MsG0180002181.01.T01:CDS 30.0%
! CTGACTTTTAATCATGTCAT+AGG - Chr1:34366715-34366734 None:intergenic 30.0%
! GATTTTAAACGATGACTTTG+TGG - Chr1:34367302-34367321 None:intergenic 30.0%
! TTGTTAAGGTTTGCTTCTAA+GGG - Chr1:34368072-34368091 None:intergenic 30.0%
! TTTGTTAAGGTTTGCTTCTA+AGG - Chr1:34368073-34368092 None:intergenic 30.0%
!! AAGATATCTGCTGATTTCAT+TGG + Chr1:34365998-34366017 MsG0180002181.01.T01:CDS 30.0%
!! CATCTAAGCTAAAGCATTTT+AGG + Chr1:34366559-34366578 MsG0180002181.01.T01:CDS 30.0%
!! GCTTGCTTTTAATCGTTTTA+AGG + Chr1:34366908-34366927 MsG0180002181.01.T01:CDS 30.0%
!! GCTTTCAGAATTGTTTTTCT+TGG - Chr1:34367957-34367976 None:intergenic 30.0%
!!! ATCCTTTTTTCCTTCTTTGA+TGG - Chr1:34367103-34367122 None:intergenic 30.0%
!!! CTTTTTTCTTTTTTCCGTGA+TGG - Chr1:34367832-34367851 None:intergenic 30.0%
!!! GTAGTTTCTGAAACATTTTC+TGG - Chr1:34365362-34365381 None:intergenic 30.0%
AAACTACAAGCATCACTATC+TGG - Chr1:34366081-34366100 None:intergenic 35.0%
AAATCGGTGATTGTATTCGT+CGG + Chr1:34367317-34367336 MsG0180002181.01.T01:CDS 35.0%
AAGATATGAGCGACACATAT+TGG + Chr1:34367713-34367732 MsG0180002181.01.T01:CDS 35.0%
AAGCACAATTAATAGCACTC+TGG - Chr1:34366632-34366651 None:intergenic 35.0%
AATCGGTGACTTTAATATGG+TGG + Chr1:34365703-34365722 MsG0180002181.01.T01:CDS 35.0%
ACAGTTGTCGAAACAACAAT+CGG + Chr1:34365617-34365636 MsG0180002181.01.T01:CDS 35.0%
ATAGGGCTTACGATTAACTT+GGG - Chr1:34367933-34367952 None:intergenic 35.0%
ATCATGTCATAGGTGTCTTT+AGG - Chr1:34366705-34366724 None:intergenic 35.0%
ATTCCTATGCTCTTCAATTG+TGG - Chr1:34366595-34366614 None:intergenic 35.0%
CAACAAAAAATGAATGGTCC+GGG - Chr1:34366977-34366996 None:intergenic 35.0%
CATGAGGAGATACAAATAGA+CGG + Chr1:34365911-34365930 MsG0180002181.01.T01:CDS 35.0%
CTAGAACACTTCCTTATAGA+AGG - Chr1:34367367-34367386 None:intergenic 35.0%
GACACATCTGATTCATTATC+AGG - Chr1:34367430-34367449 None:intergenic 35.0%
GCATTGTCATCTATATAACC+AGG - Chr1:34368006-34368025 None:intergenic 35.0%
GGTCATAATGAAGTGATTTG+TGG + Chr1:34365440-34365459 MsG0180002181.01.T01:CDS 35.0%
GTTGTAGAATTTGAAGAAGC+CGG + Chr1:34365515-34365534 MsG0180002181.01.T01:CDS 35.0%
TAAGAAATGTGTAGATGCAG+AGG + Chr1:34368170-34368189 MsG0180002181.01.T01:CDS 35.0%
TATAGGGCTTACGATTAACT+TGG - Chr1:34367934-34367953 None:intergenic 35.0%
TATTGAGACTGAGGAAAACT+TGG + Chr1:34366125-34366144 MsG0180002181.01.T01:CDS 35.0%
TCAACAATCTGATGTACATG+AGG + Chr1:34365895-34365914 MsG0180002181.01.T01:CDS 35.0%
TCTGTTTCAGATTCCTTAAG+TGG - Chr1:34368114-34368133 None:intergenic 35.0%
TGCAACTCCTGTAGTTAAAA+AGG + Chr1:34367031-34367050 MsG0180002181.01.T01:CDS 35.0%
TTCTCTCTCAGATATGGTTT+GGG + Chr1:34366398-34366417 MsG0180002181.01.T01:CDS 35.0%
TTGCCAGAAATACAACATTG+TGG + Chr1:34366942-34366961 MsG0180002181.01.T01:CDS 35.0%
TTGTAGAATTTGAAGAAGCC+GGG + Chr1:34365516-34365535 MsG0180002181.01.T01:CDS 35.0%
TTGTCATCTATATAACCAGG+AGG - Chr1:34368003-34368022 None:intergenic 35.0%
TTTCTCTCTCAGATATGGTT+TGG + Chr1:34366397-34366416 MsG0180002181.01.T01:CDS 35.0%
! ACTTATTTCTTGTTGAACCC+CGG - Chr1:34366751-34366770 None:intergenic 35.0%
! AGAAAAGTATACTCTCCAAG+GGG - Chr1:34367541-34367560 None:intergenic 35.0%
! CAGAAAAGTATACTCTCCAA+GGG - Chr1:34367542-34367561 None:intergenic 35.0%
! CTATATAACCAGGAGGTTTT+CGG - Chr1:34367996-34368015 None:intergenic 35.0%
! CTATTTCGTCGCATATTTTG+GGG + Chr1:34366512-34366531 MsG0180002181.01.T01:CDS 35.0%
! GAGTGCTATTAATTGTGCTT+TGG + Chr1:34366632-34366651 MsG0180002181.01.T01:CDS 35.0%
! TATATAACCAGGAGGTTTTC+GGG - Chr1:34367995-34368014 None:intergenic 35.0%
! TCAGAAAAGTATACTCTCCA+AGG - Chr1:34367543-34367562 None:intergenic 35.0%
! TGATTTGTGGTGATTCTGTT+GGG + Chr1:34365453-34365472 MsG0180002181.01.T01:CDS 35.0%
! TTGGAAAGAGATTTTACGCA+CGG + Chr1:34367621-34367640 MsG0180002181.01.T01:CDS 35.0%
! TTTTCTCCCATCTTGCATTT+CGG - Chr1:34367251-34367270 None:intergenic 35.0%
!! GCTATTTCGTCGCATATTTT+GGG + Chr1:34366511-34366530 MsG0180002181.01.T01:CDS 35.0%
!! GGAGAGTATACTTTTCTGAA+TGG + Chr1:34367544-34367563 MsG0180002181.01.T01:CDS 35.0%
!! TGAACTATTTCTGAACTACC+AGG - Chr1:34366333-34366352 None:intergenic 35.0%
!!! AGTGATGCTTGTAGTTTTGT+TGG + Chr1:34366084-34366103 MsG0180002181.01.T01:intron 35.0%
!!! GTTTTTTCCAGCTTAACTAG+TGG + Chr1:34366022-34366041 MsG0180002181.01.T01:intron 35.0%
!!! TGCTATTTCGTCGCATATTT+TGG + Chr1:34366510-34366529 MsG0180002181.01.T01:CDS 35.0%
AAAGTCAACGAGGAGTCAAA+TGG + Chr1:34366225-34366244 MsG0180002181.01.T01:CDS 40.0%
AACAATCGGCGACTTCAATT+TGG + Chr1:34365631-34365650 MsG0180002181.01.T01:CDS 40.0%
AACACTATCCGAGTTTCCTA+CGG + Chr1:34366842-34366861 MsG0180002181.01.T01:CDS 40.0%
AAGTTCATAACAAGCTCAGC+AGG - Chr1:34368030-34368049 None:intergenic 40.0%
AATAAGTATCACACATGGGG+TGG + Chr1:34366764-34366783 MsG0180002181.01.T01:CDS 40.0%
AATCACACTGCAGAGGTTAA+AGG + Chr1:34365971-34365990 MsG0180002181.01.T01:CDS 40.0%
AATCGGTGATTGTATTCGTC+GGG + Chr1:34367318-34367337 MsG0180002181.01.T01:CDS 40.0%
ACACTCAAGTTACTGACCAA+GGG + Chr1:34366172-34366191 MsG0180002181.01.T01:CDS 40.0%
ACCTCCAACTATCACATCAT+GGG - Chr1:34365390-34365409 None:intergenic 40.0%
AGAGATCGAAAACCATTTCC+TGG - Chr1:34368311-34368330 None:intergenic 40.0%
AGGATGTCAGACCTAATGAA+TGG + Chr1:34367118-34367137 MsG0180002181.01.T01:intron 40.0%
ATCTTGCATTTCGGAGTCAT+CGG - Chr1:34367242-34367261 None:intergenic 40.0%
ATGACTCCGAAATGCAAGAT+GGG + Chr1:34367242-34367261 MsG0180002181.01.T01:CDS 40.0%
CAAGTAACCACTAGTTAAGC+TGG - Chr1:34366032-34366051 None:intergenic 40.0%
CACCTGAACATTCCAAGAAA+AGG + Chr1:34367191-34367210 MsG0180002181.01.T01:CDS 40.0%
CACTTGGAGTGTAATTAAGC+TGG - Chr1:34368251-34368270 None:intergenic 40.0%
CCAGAAATACAACATTGTGG+AGG + Chr1:34366945-34366964 MsG0180002181.01.T01:CDS 40.0%
CCTCCACAATGTTGTATTTC+TGG - Chr1:34366948-34366967 None:intergenic 40.0%
CTGCCAAAAGCAAAAGAAGA+AGG + Chr1:34366369-34366388 MsG0180002181.01.T01:CDS 40.0%
GATTTGTGGTGATTCTGTTG+GGG + Chr1:34365454-34365473 MsG0180002181.01.T01:CDS 40.0%
GGATGTCAGACCTAATGAAT+GGG + Chr1:34367119-34367138 MsG0180002181.01.T01:intron 40.0%
TAAGGGAACAGAATTGAGCT+CGG - Chr1:34368055-34368074 None:intergenic 40.0%
TCAGGTGAAACCAGATTATC+TGG - Chr1:34367178-34367197 None:intergenic 40.0%
TCTCAAGACGAGTCGAATAT+GGG + Chr1:34366661-34366680 MsG0180002181.01.T01:CDS 40.0%
TCTCTCTCAGATATGGTTTG+GGG + Chr1:34366399-34366418 MsG0180002181.01.T01:CDS 40.0%
TGGAAAGGAAAAAGTCAACG+AGG + Chr1:34366215-34366234 MsG0180002181.01.T01:CDS 40.0%
TTGGGGACAAAACATTTGCA+TGG + Chr1:34366529-34366548 MsG0180002181.01.T01:CDS 40.0%
! AATCTGGAGTCCCATTCATT+AGG - Chr1:34367132-34367151 None:intergenic 40.0%
! AGCAATGATGATGCTTTAGC+AGG + Chr1:34365764-34365783 MsG0180002181.01.T01:CDS 40.0%
! CCTTGAAAAGTGCAACTCAA+AGG + Chr1:34365823-34365842 MsG0180002181.01.T01:CDS 40.0%
! CGAGTTTTCTCTCTCAGATA+TGG + Chr1:34366392-34366411 MsG0180002181.01.T01:CDS 40.0%
! CTCCTTTTCTTGGAATGTTC+AGG - Chr1:34367196-34367215 None:intergenic 40.0%
! CTTTAGCAGGTAGTTCTGTA+GGG + Chr1:34365777-34365796 MsG0180002181.01.T01:CDS 40.0%
! GTGATTTGTGGTGATTCTGT+TGG + Chr1:34365452-34365471 MsG0180002181.01.T01:CDS 40.0%
! TACTTTTCTGAATGGCAGCA+TGG + Chr1:34367552-34367571 MsG0180002181.01.T01:CDS 40.0%
! TCGCCTTCTTCTTTTGCTTT+TGG - Chr1:34366375-34366394 None:intergenic 40.0%
! TCTCCACAATTGAAGAGCAT+AGG + Chr1:34366589-34366608 MsG0180002181.01.T01:CDS 40.0%
! TTTAGCAGGTAGTTCTGTAG+GGG + Chr1:34365778-34365797 MsG0180002181.01.T01:CDS 40.0%
! TTTTCCTTTCCATCACGCAA+CGG - Chr1:34366207-34366226 None:intergenic 40.0%
!! AAGTTGATAGAGTAAGCAGC+CGG + Chr1:34368133-34368152 MsG0180002181.01.T01:CDS 40.0%
!! ACAGGTGTCGAAACAACAAT+CGG + Chr1:34365686-34365705 MsG0180002181.01.T01:CDS 40.0%
!! GTTGCTGCCTTTTTAACTAC+AGG - Chr1:34367041-34367060 None:intergenic 40.0%
!! TAAGCGTTTTGGACCACTTA+AGG + Chr1:34368098-34368117 MsG0180002181.01.T01:CDS 40.0%
!!! CCTTTGAGTTGCACTTTTCA+AGG - Chr1:34365826-34365845 None:intergenic 40.0%
AAACCCCCAATAGTTGGAAC+TGG + Chr1:34367667-34367686 MsG0180002181.01.T01:CDS 45.0%
AACCAGTGCAACAACCATCA+CGG + Chr1:34367815-34367834 MsG0180002181.01.T01:intron 45.0%
AACCCCCAATAGTTGGAACT+GGG + Chr1:34367668-34367687 MsG0180002181.01.T01:CDS 45.0%
AACCTCTGCAGTGTGATTCA+CGG - Chr1:34365969-34365988 None:intergenic 45.0%
AATCGGCGACTTCAATTTGG+TGG + Chr1:34365634-34365653 MsG0180002181.01.T01:CDS 45.0%
ACAACCCTAGATTCCTCAAC+CGG - Chr1:34365500-34365519 None:intergenic 45.0%
ACATACCACAGACGCATCTA+GGG - Chr1:34365417-34365436 None:intergenic 45.0%
ACCCATGATGTGATAGTTGG+AGG + Chr1:34365386-34365405 MsG0180002181.01.T01:CDS 45.0%
ACCTGTACTACCAACTACTG+CGG - Chr1:34365672-34365691 None:intergenic 45.0%
ACTGACAGGGTCATTGACAA+TGG + Chr1:34367736-34367755 MsG0180002181.01.T01:CDS 45.0%
AGGAAGAAACCCCCAATAGT+TGG + Chr1:34367661-34367680 MsG0180002181.01.T01:CDS 45.0%
AGTCAGACAGTAGAGAACAC+CGG + Chr1:34366729-34366748 MsG0180002181.01.T01:CDS 45.0%
ATAGCTGACAACGATGTGAG+CGG + Chr1:34365854-34365873 MsG0180002181.01.T01:CDS 45.0%
ATTCTGTTGGGGTAGTTGGT+GGG + Chr1:34365465-34365484 MsG0180002181.01.T01:CDS 45.0%
CACCTCCAACTATCACATCA+TGG - Chr1:34365391-34365410 None:intergenic 45.0%
CACTGTGCATCCATCAAAGA+AGG + Chr1:34367090-34367109 MsG0180002181.01.T01:intron 45.0%
CCTGATCATCCTCATCAGTT+GGG - Chr1:34367456-34367475 None:intergenic 45.0%
CGACACATATTGGACTGACA+GGG + Chr1:34367723-34367742 MsG0180002181.01.T01:CDS 45.0%
GACACTCAAGTTACTGACCA+AGG + Chr1:34366171-34366190 MsG0180002181.01.T01:CDS 45.0%
GATGACTCCGAAATGCAAGA+TGG + Chr1:34367241-34367260 MsG0180002181.01.T01:CDS 45.0%
GCTATCTTCACTTCAGCTTG+TGG + Chr1:34367507-34367526 MsG0180002181.01.T01:CDS 45.0%
GTCTCAAGACGAGTCGAATA+TGG + Chr1:34366660-34366679 MsG0180002181.01.T01:CDS 45.0%
GTGACCCAGTTCCAACTATT+GGG - Chr1:34367675-34367694 None:intergenic 45.0%
GTGACCCATGATGTGATAGT+TGG + Chr1:34365383-34365402 MsG0180002181.01.T01:CDS 45.0%
GTGAGAGATGAAGCAGTAGT+TGG + Chr1:34365590-34365609 MsG0180002181.01.T01:CDS 45.0%
TAGATGCGTCTGTGGTATGT+GGG + Chr1:34365417-34365436 MsG0180002181.01.T01:CDS 45.0%
TCAAAGTCTCCATCTGCCTT+TGG - Chr1:34367400-34367419 None:intergenic 45.0%
TCACTGCGTCACCTTCTATA+AGG + Chr1:34367353-34367372 MsG0180002181.01.T01:CDS 45.0%
TCCTGATCATCCTCATCAGT+TGG - Chr1:34367457-34367476 None:intergenic 45.0%
TCTTAAAGACCACTCTTGCC+CGG - Chr1:34368155-34368174 None:intergenic 45.0%
TGACCCAGTTCCAACTATTG+GGG - Chr1:34367674-34367693 None:intergenic 45.0%
TGCAACACAAGACCAGGAAA+TGG + Chr1:34368296-34368315 MsG0180002181.01.T01:CDS 45.0%
TGTTGATGCAACACAAGACC+AGG + Chr1:34368290-34368309 MsG0180002181.01.T01:CDS 45.0%
TTCTAGTGACCGATCTCCAA+AGG + Chr1:34367381-34367400 MsG0180002181.01.T01:CDS 45.0%
! CTTCACAAGCGCATGTTTTC+CGG - Chr1:34366310-34366329 None:intergenic 45.0%
! GCTTTAGCAGGTAGTTCTGT+AGG + Chr1:34365776-34365795 MsG0180002181.01.T01:CDS 45.0%
! TTTGGAGCTTGTGACTGCTA+AGG + Chr1:34366878-34366897 MsG0180002181.01.T01:CDS 45.0%
! TTTGGTGACTTAGCAGAGAC+TGG - Chr1:34367863-34367882 None:intergenic 45.0%
! TTTTGTTGGTGCAGGTTCGT+CGG + Chr1:34366098-34366117 MsG0180002181.01.T01:intron 45.0%
!! AGTTGATAGAGTAAGCAGCC+GGG + Chr1:34368134-34368153 MsG0180002181.01.T01:CDS 45.0%
!! ATTCTCCTGATGGTGATGGT+CGG + Chr1:34367149-34367168 MsG0180002181.01.T01:CDS 45.0%
!! GAAGCTTTGAACAGTGCACT+TGG - Chr1:34368267-34368286 None:intergenic 45.0%
!! GAGTTGGGTAGCGTTGTTTT+GGG + Chr1:34365560-34365579 MsG0180002181.01.T01:CDS 45.0%
!! TGAGTTGGGTAGCGTTGTTT+TGG + Chr1:34365559-34365578 MsG0180002181.01.T01:CDS 45.0%
!!! GCTTGTAGTTTTGTTGGTGC+AGG + Chr1:34366090-34366109 MsG0180002181.01.T01:intron 45.0%
!!! TGCACTGGTTTTTGTTGCAC+TGG - Chr1:34367805-34367824 None:intergenic 45.0%
AAACATGCGCTTGTGAAGCC+TGG + Chr1:34366312-34366331 MsG0180002181.01.T01:CDS 50.0%
AAACGATCAAAGCCAGCCGT+AGG - Chr1:34366861-34366880 None:intergenic 50.0%
AAAGCCAGCCGTAGGAAACT+CGG - Chr1:34366853-34366872 None:intergenic 50.0%
AACCGTGAATCACACTGCAG+AGG + Chr1:34365964-34365983 MsG0180002181.01.T01:CDS 50.0%
AAGTGAGAAGTCACCCATGG+TGG + Chr1:34366424-34366443 MsG0180002181.01.T01:CDS 50.0%
AGATGCGTCTGTGGTATGTG+GGG + Chr1:34365418-34365437 MsG0180002181.01.T01:CDS 50.0%
AGATTCCTCAACCGGACACT+CGG - Chr1:34365492-34365511 None:intergenic 50.0%
AGTGTCCGGTTGAGGAATCT+AGG + Chr1:34365492-34365511 MsG0180002181.01.T01:CDS 50.0%
ATAGACGGCGACGATCAACA+AGG + Chr1:34365926-34365945 MsG0180002181.01.T01:CDS 50.0%
ATCCGTCAGATGCATCTGAG+AGG + Chr1:34366463-34366482 MsG0180002181.01.T01:CDS 50.0%
ATTTCGGAGTCATCGGCGTA+GGG - Chr1:34367235-34367254 None:intergenic 50.0%
CACATACCACAGACGCATCT+AGG - Chr1:34365418-34365437 None:intergenic 50.0%
CCATCACCATCAGGAGAATC+TGG - Chr1:34367148-34367167 None:intergenic 50.0%
CCCAACTGATGAGGATGATC+AGG + Chr1:34367453-34367472 MsG0180002181.01.T01:CDS 50.0%
CTAGATGCGTCTGTGGTATG+TGG + Chr1:34365416-34365435 MsG0180002181.01.T01:CDS 50.0%
CTGTAGTTGTGGCTGCTGAT+TGG + Chr1:34367602-34367621 MsG0180002181.01.T01:CDS 50.0%
GACCCAGTTCCAACTATTGG+GGG - Chr1:34367673-34367692 None:intergenic 50.0%
GACGGATCAAATATCTGCCC+AGG - Chr1:34366450-34366469 None:intergenic 50.0%
GATTCTGTTGGGGTAGTTGG+TGG + Chr1:34365464-34365483 MsG0180002181.01.T01:CDS 50.0%
GCAAAGTGAGAAGTCACCCA+TGG + Chr1:34366421-34366440 MsG0180002181.01.T01:CDS 50.0%
GCGACACATATTGGACTGAC+AGG + Chr1:34367722-34367741 MsG0180002181.01.T01:CDS 50.0%
GGTGACCCAGTTCCAACTAT+TGG - Chr1:34367676-34367695 None:intergenic 50.0%
GGTGATTCTGTTGGGGTAGT+TGG + Chr1:34365461-34365480 MsG0180002181.01.T01:CDS 50.0%
GTCAACGAGGAGTCAAATGG+TGG + Chr1:34366228-34366247 MsG0180002181.01.T01:CDS 50.0%
GTCAGACAGTAGAGAACACC+GGG + Chr1:34366730-34366749 MsG0180002181.01.T01:CDS 50.0%
GTGTCCGGTTGAGGAATCTA+GGG + Chr1:34365493-34365512 MsG0180002181.01.T01:CDS 50.0%
TAGACGGCGACGATCAACAA+GGG + Chr1:34365927-34365946 MsG0180002181.01.T01:CDS 50.0%
TATCTTGTGATCTGCGGCCT+CGG - Chr1:34365735-34365754 None:intergenic 50.0%
TCAGACAGTAGAGAACACCG+GGG + Chr1:34366731-34366750 MsG0180002181.01.T01:CDS 50.0%
TCCGTCAGATGCATCTGAGA+GGG + Chr1:34366464-34366483 MsG0180002181.01.T01:CDS 50.0%
TGAAACCCTAGATGCGTCTG+TGG + Chr1:34365409-34365428 MsG0180002181.01.T01:CDS 50.0%
TGGTCGGACTCCAGATAATC+TGG + Chr1:34367165-34367184 MsG0180002181.01.T01:CDS 50.0%
TGTGTCTCTCCCAACTGATG+AGG + Chr1:34367444-34367463 MsG0180002181.01.T01:CDS 50.0%
TTCCGTGATGGTTGTTGCAC+TGG - Chr1:34367820-34367839 None:intergenic 50.0%
! AGCGCTCTTGCTCCTTTTCT+TGG - Chr1:34367206-34367225 None:intergenic 50.0%
! CCAGATTCTCCTGATGGTGA+TGG + Chr1:34367145-34367164 MsG0180002181.01.T01:intron 50.0%
! CTCCATCTGCCTTTGGAGAT+CGG - Chr1:34367393-34367412 None:intergenic 50.0%
! GGCTTACGATTAACTTGGGC+TGG - Chr1:34367929-34367948 None:intergenic 50.0%
! GGCTTTGGTGACTTAACAGC+TGG - Chr1:34367887-34367906 None:intergenic 50.0%
! GGTGACTTAACAGCTGGCTT+TGG - Chr1:34367881-34367900 None:intergenic 50.0%
! GTCGGTGTCTATTGAGACTG+AGG + Chr1:34366116-34366135 MsG0180002181.01.T01:CDS 50.0%
! TGTGAGCGGTGTTTCTGCTT+TGG + Chr1:34365868-34365887 MsG0180002181.01.T01:CDS 50.0%
! TTCTGAAAGCAATCCTGCCG+AGG + Chr1:34367967-34367986 MsG0180002181.01.T01:intron 50.0%
!! ACATTGTGGAGGTGTTGACC+CGG + Chr1:34366956-34366975 MsG0180002181.01.T01:CDS 50.0%
!! CGATTAACTTGGGCTGGCTT+TGG - Chr1:34367923-34367942 None:intergenic 50.0%
!! TAATATGGTGGATGCTGCCG+AGG + Chr1:34365715-34365734 MsG0180002181.01.T01:CDS 50.0%
!! TACGGCTGGCTTTGATCGTT+TGG + Chr1:34366860-34366879 MsG0180002181.01.T01:CDS 50.0%
!! TGCACTGGTTTCTGTTGCAC+TGG - Chr1:34367790-34367809 None:intergenic 50.0%
!!! TGGGTAGCGTTGTTTTGGGA+GGG + Chr1:34365564-34365583 MsG0180002181.01.T01:CDS 50.0%
!!! TTGGGTAGCGTTGTTTTGGG+AGG + Chr1:34365563-34365582 MsG0180002181.01.T01:CDS 50.0%
AATATCTGCCCAGGCCACCA+TGG - Chr1:34366441-34366460 None:intergenic 55.0%
ACTACCAACTACTGCGGCCT+CGG - Chr1:34365666-34365685 None:intergenic 55.0%
AGAAGCCGGGAGTGAGAATG+CGG + Chr1:34365529-34365548 MsG0180002181.01.T01:CDS 55.0%
ATATCTGCCCAGGCCACCAT+GGG - Chr1:34366440-34366459 None:intergenic 55.0%
CATTTCGGAGTCATCGGCGT+AGG - Chr1:34367236-34367255 None:intergenic 55.0%
CGAGGAGTCAAATGGTGGTC+AGG + Chr1:34366233-34366252 MsG0180002181.01.T01:CDS 55.0%
CTATCCGAGTTTCCTACGGC+TGG + Chr1:34366846-34366865 MsG0180002181.01.T01:CDS 55.0%
CTTGTGGCACAAGAACCCCT+TGG + Chr1:34367523-34367542 MsG0180002181.01.T01:CDS 55.0%
GACCGATCTCCAAAGGCAGA+TGG + Chr1:34367388-34367407 MsG0180002181.01.T01:CDS 55.0%
GATGCGTCTGTGGTATGTGG+GGG + Chr1:34365419-34365438 MsG0180002181.01.T01:CDS 55.0%
GCCCTCTCAGATGCATCTGA+CGG - Chr1:34366468-34366487 None:intergenic 55.0%
GGGACTCCAGATTCTCCTGA+TGG + Chr1:34367139-34367158 MsG0180002181.01.T01:intron 55.0%
! CAATTTGGTGGATGCTGCCG+AGG + Chr1:34365646-34365665 MsG0180002181.01.T01:CDS 55.0%
! GGCTTTGGTGACTTGGAAGC+TGG - Chr1:34367908-34367927 None:intergenic 55.0%
! GGTGACTTGGAAGCTGGCTT+TGG - Chr1:34367902-34367921 None:intergenic 55.0%
!! GCCGCAGTAGTTGGTAGTAC+AGG + Chr1:34365668-34365687 MsG0180002181.01.T01:CDS 55.0%
!! TGCACTGGTTTCTGTTGCGC+TGG - Chr1:34367775-34367794 None:intergenic 55.0%
!! TTGGGCTGGCTTTGGTGACT+TGG - Chr1:34367915-34367934 None:intergenic 55.0%
!!! GGGTAGCGTTGTTTTGGGAG+GGG + Chr1:34365565-34365584 MsG0180002181.01.T01:CDS 55.0%
AATGCGGCGGCGGTTGAGTT+GGG + Chr1:34365545-34365564 MsG0180002181.01.T01:CDS 60.0%
AGAAGTCACCCATGGTGGCC+TGG + Chr1:34366429-34366448 MsG0180002181.01.T01:CDS 60.0%
AGTAAGCAGCCGGGCAAGAG+TGG + Chr1:34368143-34368162 MsG0180002181.01.T01:CDS 60.0%
GAAGTCACCCATGGTGGCCT+GGG + Chr1:34366430-34366449 MsG0180002181.01.T01:CDS 60.0%
GGAGTCCGACCATCACCATC+AGG - Chr1:34367157-34367176 None:intergenic 60.0%
TTCCATCACGCAACGGCGCA+TGG - Chr1:34366200-34366219 None:intergenic 60.0%
! TGCGCCGTTGCGTGATGGAA+AGG + Chr1:34366200-34366219 MsG0180002181.01.T01:CDS 60.0%
!! AGTTGGTGGGACCGAGTGTC+CGG + Chr1:34365478-34365497 MsG0180002181.01.T01:CDS 60.0%
!! CAGGAGGTTTTCGGGAGCCT+CGG - Chr1:34367987-34368006 None:intergenic 60.0%
AGCCATGCGCCGTTGCGTGA+TGG + Chr1:34366195-34366214 MsG0180002181.01.T01:CDS 65.0%
AGCCGGGAGTGAGAATGCGG+CGG + Chr1:34365532-34365551 MsG0180002181.01.T01:CDS 65.0%
CGAGGCTCCCGAAAACCTCC+TGG + Chr1:34367985-34368004 MsG0180002181.01.T01:intron 65.0%
GAATGCGGCGGCGGTTGAGT+TGG + Chr1:34365544-34365563 MsG0180002181.01.T01:CDS 65.0%
TGGGACCGAGTGTCCGGTTG+AGG + Chr1:34365484-34365503 MsG0180002181.01.T01:CDS 65.0%
!! AGGTTTTCGGGAGCCTCGGC+AGG - Chr1:34367983-34368002 None:intergenic 65.0%
CGCCGCCGCATTCTCACTCC+CGG - Chr1:34365537-34365556 None:intergenic 70.0%
CGGGAGTGAGAATGCGGCGG+CGG + Chr1:34365535-34365554 MsG0180002181.01.T01:CDS 70.0%
GCAACGGCGCATGGCTCCCT+TGG - Chr1:34366191-34366210 None:intergenic 70.0%
GCTGCCGAGGCCGCAGTAGT+TGG + Chr1:34365659-34365678 MsG0180002181.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 34365350 34368356 34365350 ID=MsG0180002181.01;Name=MsG0180002181.01
Chr1 mRNA 34365350 34368356 34365350 ID=MsG0180002181.01.T01;Parent=MsG0180002181.01;Name=MsG0180002181.01.T01;_AED=0.39;_eAED=0.40;_QI=0|0|0|1|1|1|4|0|869
Chr1 exon 34365350 34366019 34365350 ID=MsG0180002181.01.T01:exon:6921;Parent=MsG0180002181.01.T01
Chr1 exon 34366112 34367080 34366112 ID=MsG0180002181.01.T01:exon:6920;Parent=MsG0180002181.01.T01
Chr1 exon 34367149 34367819 34367149 ID=MsG0180002181.01.T01:exon:6919;Parent=MsG0180002181.01.T01
Chr1 exon 34368057 34368356 34368057 ID=MsG0180002181.01.T01:exon:6918;Parent=MsG0180002181.01.T01
Chr1 CDS 34365350 34366019 34365350 ID=MsG0180002181.01.T01:cds;Parent=MsG0180002181.01.T01
Chr1 CDS 34366112 34367080 34366112 ID=MsG0180002181.01.T01:cds;Parent=MsG0180002181.01.T01
Chr1 CDS 34367149 34367819 34367149 ID=MsG0180002181.01.T01:cds;Parent=MsG0180002181.01.T01
Chr1 CDS 34368057 34368356 34368057 ID=MsG0180002181.01.T01:cds;Parent=MsG0180002181.01.T01
Gene Sequence

>MsG0180002181.01.T01

ATGGAGGAACCAGAAAATGTTTCAGAAACTACTGTGACCCATGATGTGATAGTTGGAGGTGAAACCCTAGATGCGTCTGTGGTATGTGGGGGTCATAATGAAGTGATTTGTGGTGATTCTGTTGGGGTAGTTGGTGGGACCGAGTGTCCGGTTGAGGAATCTAGGGTTGTAGAATTTGAAGAAGCCGGGAGTGAGAATGCGGCGGCGGTTGAGTTGGGTAGCGTTGTTTTGGGAGGGGAAGTGAGAGATGAAGCAGTAGTTGGTAGTACAGTTGTCGAAACAACAATCGGCGACTTCAATTTGGTGGATGCTGCCGAGGCCGCAGTAGTTGGTAGTACAGGTGTCGAAACAACAATCGGTGACTTTAATATGGTGGATGCTGCCGAGGCCGCAGATCACAAGATAATAAATACTAGCAATGATGATGCTTTAGCAGGTAGTTCTGTAGGGGAAGAAAATGTACAGTGCTTTAGCCTTGAAAAGTGCAACTCAAAGGAGCAATTGATAGCTGACAACGATGTGAGCGGTGTTTCTGCTTTGGATGCTCAACAATCTGATGTACATGAGGAGATACAAATAGACGGCGACGATCAACAAGGGACAGAAAGAAATGAAACCGTGAATCACACTGCAGAGGTTAAAGGTAAGAAGATATCTGCTGATTTCATTGGTTCGTCGGTGTCTATTGAGACTGAGGAAAACTTGGATGCTAATGCAATTGTAGAAGACGACACTCAAGTTACTGACCAAGGGAGCCATGCGCCGTTGCGTGATGGAAAGGAAAAAGTCAACGAGGAGTCAAATGGTGGTCAGGAAATTGAAAAAGTTAATGAAGTTGGGAAGAGAAAACTAAGAGATAGAAAAGCCGGAAAACATGCGCTTGTGAAGCCTGGTAGTTCAGAAATAGTTCATCAGGCACGATATTTGCTGCCAAAAGCAAAAGAAGAAGGCGAGTTTTCTCTCTCAGATATGGTTTGGGGCAAAGTGAGAAGTCACCCATGGTGGCCTGGGCAGATATTTGATCCGTCAGATGCATCTGAGAGGGCAAAGAAGCATTATAAAAAAGATTGCTATTTCGTCGCATATTTTGGGGACAAAACATTTGCATGGAATGAAGCATCTAAGCTAAAGCATTTTAGGGCACATTTCTCCACAATTGAAGAGCATAGGAATCGTTCAGAATCATTCCAGAGTGCTATTAATTGTGCTTTGGATGAAGTCTCAAGACGAGTCGAATATGGGCTAGCATGTTCTTGTATACCTAAAGACACCTATGACATGATTAAAAGTCAGACAGTAGAGAACACCGGGGTTCAACAAGAAATAAGTATCACACATGGGGTGGATGAGTCTCTAAATGCTGACTCATTTTCACCTTTGAATCTTATAGAATATGTGAAAACACTATCCGAGTTTCCTACGGCTGGCTTTGATCGTTTGGAGCTTGTGACTGCTAAGGCTCAGCTGCTTGCTTTTAATCGTTTTAAGGGTTTCTCTTGCTTGCCAGAAATACAACATTGTGGAGGTGTTGACCCGGACCATTCATTTTTTGTTGACGATGAACAAGATTTGTGTGAAGATACTGAGAATGCAACTCCTGTAGTTAAAAAGGCAGCAACCGTCAAAAGCGTAAATATAAATTCTCCTGATGGTGATGGTCGGACTCCAGATAATCTGGTTTCACCTGAACATTCCAAGAAAAGGAGCAAGAGCGCTATTGATCCCTACGCCGATGACTCCGAAATGCAAGATGGGAGAAAAACAATTTCTGTTGCAAAAGTTTCAAATACCACAAAGTCATCGTTTAAAATCGGTGATTGTATTCGTCGGGCTGCTAGTCAACTCACTGCGTCACCTTCTATAAGGAAGTGTTCTAGTGACCGATCTCCAAAGGCAGATGGAGACTTTGATGTTTTTCCTGATAATGAATCAGATGTGTCTCTCCCAACTGATGAGGATGATCAGGATTCGACAGAATATTCGTCTCTAGATGATTTGCTATCTTCACTTCAGCTTGTGGCACAAGAACCCCTTGGAGAGTATACTTTTCTGAATGGCAGCATGGTCAGCTTTTTCTCTGATTTCAGAAATTCTGTAGTTGTGGCTGCTGATTGGAAAGAGATTTTACGCACGGATATATTTGGTATTAAGAGGAAGAAACCCCCAATAGTTGGAACTGGGTCACCTGAAACATTTGAATTTGAAGATATGAGCGACACATATTGGACTGACAGGGTCATTGACAATGGCACTGAAGAGAAACCAGCGCAACAGAAACCAGTGCAACAGAAACCAGTGCAACAAAAACCACTCAATTCTGTTCCCTTAGAAGCAAACCTTAACAAAATGTTTAAGCGTTTTGGACCACTTAAGGAATCTGAAACAGAAGTTGATAGAGTAAGCAGCCGGGCAAGAGTGGTCTTTAAGAAATGTGTAGATGCAGAGGTAGCTTTCAATAGTGCTAAGAAGTTCAACATATTTGGATCAGTACTCGTAAATTACCAGCTTAATTACACTCCAAGTGCACTGTTCAAAGCTTCATCTGTTGATGCAACACAAGACCAGGAAATGGTTTTCGATCTCTCCAATTTTGAAGTTAATATGGTCTAG
Protein sequence

>MsG0180002181.01.T01

MEEPENVSETTVTHDVIVGGETLDASVVCGGHNEVICGDSVGVVGGTECPVEESRVVEFEEAGSENAAAVELGSVVLGGEVRDEAVVGSTVVETTIGDFNLVDAAEAAVVGSTGVETTIGDFNMVDAAEAADHKIINTSNDDALAGSSVGEENVQCFSLEKCNSKEQLIADNDVSGVSALDAQQSDVHEEIQIDGDDQQGTERNETVNHTAEVKGKKISADFIGSSVSIETEENLDANAIVEDDTQVTDQGSHAPLRDGKEKVNEESNGGQEIEKVNEVGKRKLRDRKAGKHALVKPGSSEIVHQARYLLPKAKEEGEFSLSDMVWGKVRSHPWWPGQIFDPSDASERAKKHYKKDCYFVAYFGDKTFAWNEASKLKHFRAHFSTIEEHRNRSESFQSAINCALDEVSRRVEYGLACSCIPKDTYDMIKSQTVENTGVQQEISITHGVDESLNADSFSPLNLIEYVKTLSEFPTAGFDRLELVTAKAQLLAFNRFKGFSCLPEIQHCGGVDPDHSFFVDDEQDLCEDTENATPVVKKAATVKSVNINSPDGDGRTPDNLVSPEHSKKRSKSAIDPYADDSEMQDGRKTISVAKVSNTTKSSFKIGDCIRRAASQLTASPSIRKCSSDRSPKADGDFDVFPDNESDVSLPTDEDDQDSTEYSSLDDLLSSLQLVAQEPLGEYTFLNGSMVSFFSDFRNSVVVAADWKEILRTDIFGIKRKKPPIVGTGSPETFEFEDMSDTYWTDRVIDNGTEEKPAQQKPVQQKPVQQKPLNSVPLEANLNKMFKRFGPLKESETEVDRVSSRARVVFKKCVDAEVAFNSAKKFNIFGSVLVNYQLNYTPSALFKASSVDATQDQEMVFDLSNFEVNMV*