AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003363.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003363.01.T01 MTR_1g060300 88.718 195 7 1 62 256 5 184 1.96e-111 323
MsG0180003363.01.T01 MTR_1g060300 88.718 195 7 1 62 256 92 271 9.36e-111 325
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003363.01.T01 AT2G36305 46.667 225 99 4 35 256 63 269 1.61e-59 194
MsG0180003363.01.T01 AT2G36305 44.503 191 86 3 44 231 71 244 4.38e-47 160

Find 89 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGGGACTTGCTGTACATTT+TGG 0.140370 1:+61178122 MsG0180003363.01.T01:intron
CTTGGCTACACTGTTGTCTT+TGG 0.171784 1:+61180512 MsG0180003363.01.T01:CDS
TACTGAGGAGTTGGTGTTTA+GGG 0.214017 1:+61178801 MsG0180003363.01.T01:CDS
CTTACATAAGCTGAAGAAAA+TGG 0.228803 1:-61178887 None:intergenic
ATGAAGGCTGCTATGGTTAT+AGG 0.301099 1:+61180298 MsG0180003363.01.T01:CDS
TTACTGAGGAGTTGGTGTTT+AGG 0.337828 1:+61178800 MsG0180003363.01.T01:CDS
TTGGCTACACTGTTGTCTTT+GGG 0.338858 1:+61180513 MsG0180003363.01.T01:CDS
ATACATTGTTCATCAAGTTC+CGG 0.340209 1:+61180341 MsG0180003363.01.T01:CDS
CTTGAGGGTTGTCCCATTCA+AGG 0.340813 1:+61184492 MsG0180003363.01.T01:CDS
TACATTGTTCATCAAGTTCC+GGG 0.345992 1:+61180342 MsG0180003363.01.T01:CDS
AGCTCATTTAAATCATTTCA+TGG 0.386031 1:+61180246 MsG0180003363.01.T01:intron
TTACATAAGCTGAAGAAAAT+GGG 0.389764 1:-61178886 None:intergenic
CCGTGACGAGATTTATTAAC+TGG 0.392935 1:+61178490 MsG0180003363.01.T01:CDS
CTCTTCTGTGGTATGCAGAT+TGG 0.403156 1:+61178264 MsG0180003363.01.T01:CDS
GGTATGCAGATTGGGAAAAC+AGG 0.406642 1:+61178273 MsG0180003363.01.T01:CDS
CTCCGTCCACAAACCTTGAA+TGG 0.419582 1:-61184505 None:intergenic
CTCGCCAATGGCAAACCTCC+GGG 0.443342 1:-61187411 None:intergenic
CAGAATAATGAAGGCTGCTA+TGG 0.447888 1:+61180291 MsG0180003363.01.T01:CDS
GATGTTGACCAGCGGGTCTT+CGG 0.449080 1:-61187317 None:intergenic
ATCTCGTCACGGCACATTTG+AGG 0.454475 1:-61178479 None:intergenic
ACTTTCCAATGGAAAACCTC+AGG 0.458134 1:+61177420 None:intergenic
TCTTCTGTGGTATGCAGATT+GGG 0.458989 1:+61178265 MsG0180003363.01.T01:CDS
CAATATACATGAGCAACTAA+TGG 0.463047 1:-61181267 None:intergenic
TGTATCACTATCACATTCAC+AGG 0.464974 1:+61178183 MsG0180003363.01.T01:CDS
TCTCGTCACGGCACATTTGA+GGG 0.470605 1:-61178478 None:intergenic
TTCCTATACTTCTCTGTGGA+GGG 0.473407 1:+61178833 MsG0180003363.01.T01:CDS
GGCAAACCTCCGGGGATCCA+TGG 0.476756 1:-61187402 None:intergenic
CATTGGCGAGCACCGTGCTC+CGG 0.477191 1:+61187424 MsG0180003363.01.T01:CDS
ACCATCTCACGGTGAAGCTC+CGG 0.480592 1:-61187359 None:intergenic
GCTCGCCAATGGCAAACCTC+CGG 0.480760 1:-61187412 None:intergenic
ATAACAGTCAAATATCGTTA+AGG 0.483330 1:-61187475 None:intergenic
CTTCTCTGTGAATACAATAC+AGG 0.487034 1:-61181306 None:intergenic
TAAACACCAACTCCTCAGTA+AGG 0.489297 1:-61178798 None:intergenic
TTGACCTCTCTAATGTATGC+TGG 0.493089 1:+61178375 MsG0180003363.01.T01:CDS
AGACAACAGTGTAGCCAAGC+TGG 0.498343 1:-61180508 None:intergenic
TCCGTCCACAAACCTTGAAT+GGG 0.502463 1:-61184504 None:intergenic
AACCCTCCACAGAGAAGTAT+AGG 0.503082 1:-61178835 None:intergenic
CTTCCTATACTTCTCTGTGG+AGG 0.511347 1:+61178832 MsG0180003363.01.T01:CDS
ATCTATGTCATCCGCCGCCA+TGG 0.512666 1:+61187385 MsG0180003363.01.T01:CDS
CGGAGCACGGTGCTCGCCAA+TGG 0.517006 1:-61187423 None:intergenic
CAAAGAATCATAGCACTGTA+TGG 0.517251 1:-61178862 None:intergenic
GCATGCAAAGATCCCCTTGA+GGG 0.533060 1:+61184477 MsG0180003363.01.T01:CDS
GAGCTCTGATGTTGACCAGC+GGG 0.539110 1:-61187324 None:intergenic
CTTTCCAATGGAAAACCTCA+GGG 0.547714 1:+61177421 None:intergenic
GGTCAGTGCCGAAGACCCGC+TGG 0.553716 1:+61187309 MsG0180003363.01.T01:intron
ACAAAACTACAGAATAATGA+AGG 0.555930 1:+61180282 MsG0180003363.01.T01:CDS
GATCCCCGGAGGTTTGCCAT+TGG 0.556437 1:+61187407 MsG0180003363.01.T01:CDS
GGCACCCCTTACTGAGGAGT+TGG 0.558258 1:+61178792 MsG0180003363.01.T01:intron
CATCCGCCGCCATGGATCCC+CGG 0.561854 1:+61187393 MsG0180003363.01.T01:CDS
GTGGCAGTCAACCTCAATGA+TGG 0.563964 1:-61187453 None:intergenic
ACCTCAATGATGGTCATCGC+CGG 0.565878 1:-61187443 None:intergenic
GGCACATTTGAGGGAATCAA+AGG 0.567480 1:-61178469 None:intergenic
TTGAATGGGACAACCCTCAA+GGG 0.569425 1:-61184490 None:intergenic
CCTCCGGGGATCCATGGCGG+CGG 0.578333 1:-61187396 None:intergenic
TGATGGTCATCGCCGGAGCA+CGG 0.582290 1:-61187436 None:intergenic
TCAACATCAGAGCTCTATTG+TGG 0.584233 1:+61187332 MsG0180003363.01.T01:CDS
AAACACCAACTCCTCAGTAA+GGG 0.587259 1:-61178797 None:intergenic
CTTGAATGGGACAACCCTCA+AGG 0.588234 1:-61184491 None:intergenic
ATTAGAGAGGTCAAAGCAAG+AGG 0.591725 1:-61178366 None:intergenic
ATGTCTACAGGACTCCAGCT+TGG 0.594880 1:+61180494 MsG0180003363.01.T01:intron
ATCTCACGGTGAAGCTCCGG+TGG 0.596625 1:-61187356 None:intergenic
AGAGCTCTATTGTGGACCAC+CGG 0.605944 1:+61187340 MsG0180003363.01.T01:CDS
ACAGTCAAATATCGTTAAGG+TGG 0.605958 1:-61187472 None:intergenic
AACACCAACTCCTCAGTAAG+GGG 0.610456 1:-61178796 None:intergenic
AAACCTCCGGGGATCCATGG+CGG 0.611482 1:-61187399 None:intergenic
ACCGGAGCTTCACCGTGAGA+TGG 0.612420 1:+61187358 MsG0180003363.01.T01:CDS
GTATTGTATTCACAGAGAAG+TGG 0.622262 1:+61181309 MsG0180003363.01.T01:CDS
TACATAAGCTGAAGAAAATG+GGG 0.624454 1:-61178885 None:intergenic
GTCAAAATTATGCTCTTCTG+TGG 0.624716 1:+61178252 MsG0180003363.01.T01:CDS
TCTGTGAATACAATACAGGC+AGG 0.630024 1:-61181302 None:intergenic
TACTCACCATGTGATCCACT+CGG 0.647851 1:-61178158 None:intergenic
TGAATGGGACAACCCTCAAG+GGG 0.654791 1:-61184489 None:intergenic
GGGCGTTTATGGCATCCGAG+TGG 0.655324 1:+61178143 MsG0180003363.01.T01:CDS
ACATAGATTTGACCATCTCA+CGG 0.660856 1:-61187370 None:intergenic
TGGCATCCGAGTGGATCACA+TGG 0.661449 1:+61178152 MsG0180003363.01.T01:CDS
TCCGGCGATGACCATCATTG+AGG 0.663895 1:+61187442 MsG0180003363.01.T01:CDS
ACATTGTTCATCAAGTTCCG+GGG 0.666450 1:+61180343 MsG0180003363.01.T01:CDS
CAAACAACAGAAGAGACTTG+AGG 0.666805 1:-61178407 None:intergenic
CCAGTTAATAAATCTCGTCA+CGG 0.666868 1:-61178490 None:intergenic
GTATGCAGATTGGGAAAACA+GGG 0.666907 1:+61178274 MsG0180003363.01.T01:CDS
GACTTGGAGAAACTATGTTG+TGG 0.667371 1:+61178539 MsG0180003363.01.T01:CDS
AGAGCCAGCATACATTAGAG+AGG 0.672743 1:-61178379 None:intergenic
TCGCCAATGGCAAACCTCCG+GGG 0.680417 1:-61187410 None:intergenic
TGCATGCAAAGATCCCCTTG+AGG 0.696462 1:+61184476 MsG0180003363.01.T01:CDS
AGAGCTCTGATGTTGACCAG+CGG 0.698365 1:-61187325 None:intergenic
ATGCTTCCTATACTTCTCTG+TGG 0.706186 1:+61178829 MsG0180003363.01.T01:CDS
ACAACAGGCACCCCTTACTG+AGG 0.710765 1:+61178786 MsG0180003363.01.T01:intron
CCGCCGCCATGGATCCCCGG+AGG 0.717202 1:+61187396 MsG0180003363.01.T01:CDS
GTATCACTATCACATTCACA+GGG 0.747699 1:+61178184 MsG0180003363.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATTTGTGAA+CGG + Chr1:61183369-61183388 MsG0180003363.01.T01:intron 10.0%
!! AAAATTCAAAAAATTAGAAA+CGG - Chr1:61186152-61186171 None:intergenic 10.0%
!! AATAATAAATTATACAATGA+TGG + Chr1:61180727-61180746 MsG0180003363.01.T01:intron 10.0%
!! AATATATACTAAAAAATAAC+TGG + Chr1:61179850-61179869 MsG0180003363.01.T01:intron 10.0%
!! ATATTAATAAATGCAATAAA+AGG - Chr1:61179792-61179811 None:intergenic 10.0%
!!! AGTTAAATAAACTTTTTTAT+AGG - Chr1:61184809-61184828 None:intergenic 10.0%
!!! ATTTAGTTTAATGTTAATTA+TGG - Chr1:61186661-61186680 None:intergenic 10.0%
!!! TTGTAATAAGTTAATTTTTT+CGG - Chr1:61177786-61177805 None:intergenic 10.0%
!!! TTTATTTTAAAGTTTAATCA+TGG + Chr1:61182182-61182201 MsG0180003363.01.T01:intron 10.0%
!! AAAATAAATAAAATAAGGAG+CGG + Chr1:61184154-61184173 MsG0180003363.01.T01:intron 15.0%
!! AAAATCAAAACTTTATCAAA+TGG + Chr1:61183156-61183175 MsG0180003363.01.T01:intron 15.0%
!! AAATCAAAACTTTATCAAAT+GGG + Chr1:61183157-61183176 MsG0180003363.01.T01:intron 15.0%
!! ACAGATATAAGTTAATTTAT+TGG - Chr1:61179159-61179178 None:intergenic 15.0%
!! ATAAAGATAAAAAACAAGAA+TGG - Chr1:61184011-61184030 None:intergenic 15.0%
!! ATTATTCTTATGATCTTATA+TGG + Chr1:61181080-61181099 MsG0180003363.01.T01:intron 15.0%
!! TAGAAAATGATTTAAAAAAC+AGG + Chr1:61179765-61179784 MsG0180003363.01.T01:intron 15.0%
!! TAGCCAAATAATATATTAAT+GGG + Chr1:61186738-61186757 MsG0180003363.01.T01:intron 15.0%
!! TATAAGATCATAAGAATAAT+AGG - Chr1:61181080-61181099 None:intergenic 15.0%
!! TGAAAAAATAAAACTATTGA+TGG + Chr1:61187282-61187301 MsG0180003363.01.T01:intron 15.0%
!! TTAATGTAGTCAAATATAAA+AGG + Chr1:61180823-61180842 MsG0180003363.01.T01:intron 15.0%
!! TTCTAAATATATCGATAAAT+AGG - Chr1:61179645-61179664 None:intergenic 15.0%
!! TTGTAAATGACAATAATATT+AGG - Chr1:61180175-61180194 None:intergenic 15.0%
!! TTTGTATGTAAACATATATA+GGG - Chr1:61184652-61184671 None:intergenic 15.0%
!!! AACAAATTTTACAGAAATAT+AGG - Chr1:61182258-61182277 None:intergenic 15.0%
!!! AATGAAACATTTTAATATCA+GGG + Chr1:61177650-61177669 MsG0180003363.01.T01:intron 15.0%
!!! ATAATTTTCTTTATCCTAAT+AGG + Chr1:61184847-61184866 MsG0180003363.01.T01:intron 15.0%
!!! ATTTATATTTTAATCAACCT+TGG + Chr1:61179877-61179896 MsG0180003363.01.T01:intron 15.0%
!!! CAAATAAAAGTTTAAGATAA+AGG + Chr1:61179904-61179923 MsG0180003363.01.T01:intron 15.0%
!!! CATGTATATTGTAATTTTAT+GGG + Chr1:61181279-61181298 MsG0180003363.01.T01:CDS 15.0%
!!! CTCAATTAAAACTTTTAATT+TGG + Chr1:61179372-61179391 MsG0180003363.01.T01:intron 15.0%
!!! TAATGAAACATTTTAATATC+AGG + Chr1:61177649-61177668 MsG0180003363.01.T01:intron 15.0%
!!! TAATTGAGAAAATTTTATCT+TGG - Chr1:61179670-61179689 None:intergenic 15.0%
!!! TACATTATCAATTTGTTATT+TGG + Chr1:61180981-61181000 MsG0180003363.01.T01:intron 15.0%
!!! TAGGAAATACAATTAAATTT+TGG + Chr1:61181535-61181554 MsG0180003363.01.T01:intron 15.0%
!!! TCAAAGATAAAATCATTTTA+CGG + Chr1:61182142-61182161 MsG0180003363.01.T01:intron 15.0%
!!! TCATGTATATTGTAATTTTA+TGG + Chr1:61181278-61181297 MsG0180003363.01.T01:CDS 15.0%
!!! TGTAATAAGTTAATTTTTTC+GGG - Chr1:61177785-61177804 None:intergenic 15.0%
!!! TTGAAATTTTGATACATTTA+GGG + Chr1:61177711-61177730 MsG0180003363.01.T01:intron 15.0%
!!! TTTGAAATTTTGATACATTT+AGG + Chr1:61177710-61177729 MsG0180003363.01.T01:intron 15.0%
!!! TTTTGTATGTAAACATATAT+AGG - Chr1:61184653-61184672 None:intergenic 15.0%
!! AAAATAAACATGATTTCACT+CGG - Chr1:61182170-61182189 None:intergenic 20.0%
!! AAACTATATCACATACTATA+TGG - Chr1:61185344-61185363 None:intergenic 20.0%
!! AAATCTAAACTTAGTATTGT+TGG + Chr1:61180443-61180462 MsG0180003363.01.T01:intron 20.0%
!! AAATTGAATAATAACCTTCT+TGG - Chr1:61180893-61180912 None:intergenic 20.0%
!! AAGAAGAAAAACTTGAAAAT+TGG - Chr1:61186785-61186804 None:intergenic 20.0%
!! AATGACAATAATATTAGGTA+AGG - Chr1:61180170-61180189 None:intergenic 20.0%
!! ACAAAATTTAGCTAAATTTC+TGG + Chr1:61184957-61184976 MsG0180003363.01.T01:intron 20.0%
!! ACAATAAGTAAGTATATTGA+AGG + Chr1:61177610-61177629 MsG0180003363.01.T01:intron 20.0%
!! AGCCAAATAATATATTAATG+GGG + Chr1:61186739-61186758 MsG0180003363.01.T01:intron 20.0%
!! ATACGAGTAAATTAAATCAA+AGG - Chr1:61178029-61178048 None:intergenic 20.0%
!! ATATGTCTAATCAAAATTCA+AGG - Chr1:61185817-61185836 None:intergenic 20.0%
!! ATTCTATCATTATACAAATC+TGG - Chr1:61182362-61182381 None:intergenic 20.0%
!! ATTTCAAAATAGTCTTTGAT+TGG + Chr1:61177503-61177522 MsG0180003363.01.T01:intron 20.0%
!! CAATGTTAAATGAAAAGAAA+GGG + Chr1:61181507-61181526 MsG0180003363.01.T01:intron 20.0%
!! GAGTAATAAAAATAGAAGAA+AGG - Chr1:61181355-61181374 None:intergenic 20.0%
!! GTAGCCAAATAATATATTAA+TGG + Chr1:61186737-61186756 MsG0180003363.01.T01:intron 20.0%
!! TAAGACAAAATTGTTGAATT+TGG - Chr1:61179981-61180000 None:intergenic 20.0%
!! TACCCCATTAATATATTATT+TGG - Chr1:61186744-61186763 None:intergenic 20.0%
!! TATTACAACTTTGATATGTT+GGG + Chr1:61177798-61177817 MsG0180003363.01.T01:intron 20.0%
!! TATTGTGATTCTTAATATTG+TGG + Chr1:61187079-61187098 MsG0180003363.01.T01:intron 20.0%
!! TCAATCTTGATATACAATTA+TGG - Chr1:61185704-61185723 None:intergenic 20.0%
!! TGTATATTGAAATCAGAATT+TGG - Chr1:61183316-61183335 None:intergenic 20.0%
!! TTATTACAACTTTGATATGT+TGG + Chr1:61177797-61177816 MsG0180003363.01.T01:intron 20.0%
!! TTATTCAATTTACACATTAG+TGG + Chr1:61180902-61180921 MsG0180003363.01.T01:intron 20.0%
!! TTCTATCATTATACAAATCT+GGG - Chr1:61182361-61182380 None:intergenic 20.0%
!! TTCTTAAATTTGAAGAATCA+TGG + Chr1:61183183-61183202 MsG0180003363.01.T01:intron 20.0%
!! TTTCAAAATAGTCTTTGATT+GGG + Chr1:61177504-61177523 MsG0180003363.01.T01:intron 20.0%
!!! AAAGCAAAAAGTTGTAATTT+TGG - Chr1:61185153-61185172 None:intergenic 20.0%
!!! AAATTTGTTTGTGTTATTTC+AGG + Chr1:61182269-61182288 MsG0180003363.01.T01:intron 20.0%
!!! AAGCAAAAAGTTGTAATTTT+GGG - Chr1:61185152-61185171 None:intergenic 20.0%
!!! AATTTGTTTGTGTTATTTCA+GGG + Chr1:61182270-61182289 MsG0180003363.01.T01:intron 20.0%
!!! ACTTGTGAAGATTTTATAAT+TGG + Chr1:61184239-61184258 MsG0180003363.01.T01:intron 20.0%
!!! AGAAATTTAGCTAAATTTTG+TGG - Chr1:61184958-61184977 None:intergenic 20.0%
!!! AGTTTTGATTTTGACAAAAT+TGG - Chr1:61183148-61183167 None:intergenic 20.0%
!!! ATGTGATATAGTTTTAGATA+TGG + Chr1:61185350-61185369 MsG0180003363.01.T01:intron 20.0%
!!! ATTAAATATTTTGGCTGAAA+TGG + Chr1:61184295-61184314 MsG0180003363.01.T01:intron 20.0%
!!! ATTTGTTCTCTTTAAAAACA+AGG + Chr1:61185939-61185958 MsG0180003363.01.T01:intron 20.0%
!!! ATTTTAACAAACCACTATTA+TGG - Chr1:61177941-61177960 None:intergenic 20.0%
!!! ATTTTCTCTACCTTATATAT+TGG + Chr1:61184994-61185013 MsG0180003363.01.T01:intron 20.0%
!!! GATGATTTTTGAATTATATC+TGG - Chr1:61184205-61184224 None:intergenic 20.0%
!!! GTAATAAGTTAATTTTTTCG+GGG - Chr1:61177784-61177803 None:intergenic 20.0%
!!! GTTAGATTTTGCTAATATTT+TGG - Chr1:61181425-61181444 None:intergenic 20.0%
!!! TAAACATATATAGGGTATTT+TGG - Chr1:61184644-61184663 None:intergenic 20.0%
!!! TATCAATTTGTTATTTGGTA+GGG + Chr1:61180986-61181005 MsG0180003363.01.T01:intron 20.0%
!!! TATTAATATATGTGCTACTA+TGG + Chr1:61179803-61179822 MsG0180003363.01.T01:intron 20.0%
!!! TGTTATTCTTGATTTTGAAA+AGG + Chr1:61180591-61180610 MsG0180003363.01.T01:intron 20.0%
!!! TTATAGGTTCTTTTTATTAG+AGG - Chr1:61184793-61184812 None:intergenic 20.0%
!!! TTATCAATTTGTTATTTGGT+AGG + Chr1:61180985-61181004 MsG0180003363.01.T01:intron 20.0%
!!! TTCATTTTTCCCAATATATA+AGG - Chr1:61185007-61185026 None:intergenic 20.0%
!!! TTGTAATTTTAGTTTTCAGT+TGG + Chr1:61181775-61181794 MsG0180003363.01.T01:intron 20.0%
!!! TTTTCTCTACCTTATATATT+GGG + Chr1:61184995-61185014 MsG0180003363.01.T01:intron 20.0%
!!! TTTTTTTTGTTCTGTATACT+TGG - Chr1:61182712-61182731 None:intergenic 20.0%
! AAAAAAAAAAATTGCTCCAG+CGG + Chr1:61182729-61182748 MsG0180003363.01.T01:intron 25.0%
! AAACTTATTGTTTCAGAACA+TGG - Chr1:61183903-61183922 None:intergenic 25.0%
! AAATCAAAGTAAAAGCTTAG+TGG - Chr1:61178616-61178635 None:intergenic 25.0%
! AAATGGATCATCATTAAAAG+TGG + Chr1:61186317-61186336 MsG0180003363.01.T01:intron 25.0%
! AATAATGTGCTTCCATTTAT+CGG + Chr1:61181745-61181764 MsG0180003363.01.T01:intron 25.0%
! AATAATTTCATTCAAGTGTC+AGG - Chr1:61180041-61180060 None:intergenic 25.0%
! AATCAGACATAGTTATTTAC+TGG - Chr1:61179559-61179578 None:intergenic 25.0%
! AATGACACAAATAAGGATAT+GGG + Chr1:61186245-61186264 MsG0180003363.01.T01:intron 25.0%
! AATTCAAAGGAGAAAATGAA+AGG - Chr1:61180933-61180952 None:intergenic 25.0%
! AATTTGGACATTTCTTATGA+TGG - Chr1:61184922-61184941 None:intergenic 25.0%
! ACAAAACTACAGAATAATGA+AGG + Chr1:61180282-61180301 MsG0180003363.01.T01:CDS 25.0%
! ACAAGCAGAAAACAAATATA+AGG - Chr1:61181224-61181243 None:intergenic 25.0%
! ACAAGTAAGTAAAATCAAAG+AGG + Chr1:61185443-61185462 MsG0180003363.01.T01:intron 25.0%
! ACAATAACTCTTGTCATATA+GGG + Chr1:61177578-61177597 MsG0180003363.01.T01:intron 25.0%
! AGAGTACAATATCTTATACA+GGG - Chr1:61186853-61186872 None:intergenic 25.0%
! AGCTCATTTAAATCATTTCA+TGG + Chr1:61180246-61180265 MsG0180003363.01.T01:intron 25.0%
! ATAAAAAACAAGAATGGATC+TGG - Chr1:61184005-61184024 None:intergenic 25.0%
! ATATTCTGTGTCAAATTTGT+AGG - Chr1:61184105-61184124 None:intergenic 25.0%
! ATCAAGAATAACATAACCAT+AGG - Chr1:61180584-61180603 None:intergenic 25.0%
! ATTACAACTTTGATATGTTG+GGG + Chr1:61177799-61177818 MsG0180003363.01.T01:intron 25.0%
! ATTTACAATTCAAAGAGTTG+TGG - Chr1:61181860-61181879 None:intergenic 25.0%
! CAAATATAAGGGAAAGAAAA+AGG - Chr1:61181212-61181231 None:intergenic 25.0%
! CAAGCAGAAAACAAATATAA+GGG - Chr1:61181223-61181242 None:intergenic 25.0%
! CATACACACATACAAATTAA+AGG - Chr1:61179515-61179534 None:intergenic 25.0%
! CATCATGATAATTTACTTTG+TGG + Chr1:61178085-61178104 MsG0180003363.01.T01:intron 25.0%
! GAAAACTAACATTTACATGT+AGG - Chr1:61182441-61182460 None:intergenic 25.0%
! GACGTGATTACAATAAATAA+CGG + Chr1:61177847-61177866 MsG0180003363.01.T01:intron 25.0%
! GAGAGTTATAGCATTAAATA+GGG - Chr1:61181456-61181475 None:intergenic 25.0%
! GCAATGTTAAATGAAAAGAA+AGG + Chr1:61181506-61181525 MsG0180003363.01.T01:intron 25.0%
! GTTTAATACTTAAGAAGTTC+AGG - Chr1:61185176-61185195 None:intergenic 25.0%
! TAAACATGGATCTAGTAATT+GGG - Chr1:61182994-61183013 None:intergenic 25.0%
! TAAAGTGAAGAAGTTATAAC+AGG + Chr1:61179732-61179751 MsG0180003363.01.T01:intron 25.0%
! TAAATTCACTACGATTTGTA+AGG - Chr1:61186945-61186964 None:intergenic 25.0%
! TACAAATCTATTCCGATAAA+TGG - Chr1:61181760-61181779 None:intergenic 25.0%
! TAGTTATATAAATGCCAAGA+AGG + Chr1:61180876-61180895 MsG0180003363.01.T01:intron 25.0%
! TATACACAGATTAAGAATAG+TGG - Chr1:61181589-61181608 None:intergenic 25.0%
! TATATGAAGAAAACTAAACG+AGG + Chr1:61181559-61181578 MsG0180003363.01.T01:intron 25.0%
! TATATGTTGTAAATCATCAG+TGG + Chr1:61178055-61178074 MsG0180003363.01.T01:intron 25.0%
! TATCTTGATATATGATGGTA+GGG - Chr1:61187172-61187191 None:intergenic 25.0%
! TATGAGCAATTTGTGAATTT+AGG - Chr1:61182876-61182895 None:intergenic 25.0%
! TATGCTATCTTGATATATGA+TGG - Chr1:61187177-61187196 None:intergenic 25.0%
! TATGGTTATGTTATAGGTTA+TGG + Chr1:61180615-61180634 MsG0180003363.01.T01:intron 25.0%
! TATTCTGTGTCAAATTTGTA+GGG - Chr1:61184104-61184123 None:intergenic 25.0%
! TATTGCATATATAAGATCAG+CGG + Chr1:61186424-61186443 MsG0180003363.01.T01:intron 25.0%
! TCAAAAAATTAGAAACGGTA+TGG - Chr1:61186147-61186166 None:intergenic 25.0%
! TCTATCATTATACAAATCTG+GGG - Chr1:61182360-61182379 None:intergenic 25.0%
! TCTTAATATTGTGGAAATCA+TGG + Chr1:61187088-61187107 MsG0180003363.01.T01:intron 25.0%
! TGAGAGTTATAGCATTAAAT+AGG - Chr1:61181457-61181476 None:intergenic 25.0%
! TTAAACATGGATCTAGTAAT+TGG - Chr1:61182995-61183014 None:intergenic 25.0%
! TTACATAAGCTGAAGAAAAT+GGG - Chr1:61178889-61178908 None:intergenic 25.0%
! TTTAAACCAACAGAATTGTT+TGG + Chr1:61186713-61186732 MsG0180003363.01.T01:intron 25.0%
! TTTATACATGAGAATCTCAT+GGG + Chr1:61178964-61178983 MsG0180003363.01.T01:intron 25.0%
!! AAGATTCAACAATGTTTTCA+TGG - Chr1:61183937-61183956 None:intergenic 25.0%
!! AAGGGAGAAAATAGATTTTT+AGG - Chr1:61183675-61183694 None:intergenic 25.0%
!! AAGTTTTTCTTCTTCTTTTG+GGG + Chr1:61186791-61186810 MsG0180003363.01.T01:intron 25.0%
!! AATAAAACTATTGATGGTAG+TGG + Chr1:61187288-61187307 MsG0180003363.01.T01:intron 25.0%
!! ACTTTTAATGATGATCCATT+TGG - Chr1:61186318-61186337 None:intergenic 25.0%
!! ATAAATGGAAGCACATTATT+TGG - Chr1:61181745-61181764 None:intergenic 25.0%
!! ATCTGAAATAGACTTCAAAA+TGG - Chr1:61183293-61183312 None:intergenic 25.0%
!! ATTGAGAATTTGAGAGATTT+TGG + Chr1:61180410-61180429 MsG0180003363.01.T01:intron 25.0%
!! ATTTTCTTTATCCTAATAGG+CGG + Chr1:61184850-61184869 MsG0180003363.01.T01:intron 25.0%
!! CAAGTTTTTCTTCTTCTTTT+GGG + Chr1:61186790-61186809 MsG0180003363.01.T01:intron 25.0%
!! CAATTTTGTCTTAAGATGTA+AGG + Chr1:61179988-61180007 MsG0180003363.01.T01:intron 25.0%
!! CACATTTCTAGGAATATAAA+GGG - Chr1:61183693-61183712 None:intergenic 25.0%
!! CTGAGTTAAAATTTGTTTGT+AGG + Chr1:61182538-61182557 MsG0180003363.01.T01:intron 25.0%
!! CTTTTAATGATGATCCATTT+GGG - Chr1:61186317-61186336 None:intergenic 25.0%
!! CTTTTCATTTAACATTGCAT+GGG - Chr1:61181504-61181523 None:intergenic 25.0%
!! GAAATTGTATCTGTTTTCTA+AGG + Chr1:61178915-61178934 MsG0180003363.01.T01:intron 25.0%
!! GAATTTAGGACTTGATTTAA+TGG - Chr1:61182862-61182881 None:intergenic 25.0%
!! GATTTGGTTGTTGTAAATAA+TGG + Chr1:61183220-61183239 MsG0180003363.01.T01:intron 25.0%
!! TAGAAATTTTCACACATGAT+TGG + Chr1:61180218-61180237 MsG0180003363.01.T01:intron 25.0%
!! TAGTATTCTTTTTCTTGAGA+GGG - Chr1:61180963-61180982 None:intergenic 25.0%
!! TATATATTGGTGGTATAAGA+TGG - Chr1:61183868-61183887 None:intergenic 25.0%
!! TCAAGTTTTTCTTCTTCTTT+TGG + Chr1:61186789-61186808 MsG0180003363.01.T01:intron 25.0%
!! TCACATTTCTAGGAATATAA+AGG - Chr1:61183694-61183713 None:intergenic 25.0%
!! TCTTTTCATTTAACATTGCA+TGG - Chr1:61181505-61181524 None:intergenic 25.0%
!! TTGAGAATTTGAGAGATTTT+GGG + Chr1:61180411-61180430 MsG0180003363.01.T01:intron 25.0%
!!! AAAGTAACAGCATTTTAAGA+TGG - Chr1:61181981-61182000 None:intergenic 25.0%
!!! AGTTTTAGATATGGTTATGA+TGG + Chr1:61185359-61185378 MsG0180003363.01.T01:intron 25.0%
!!! ATAGATTTTATGCTGACTTT+TGG + Chr1:61185643-61185662 MsG0180003363.01.T01:intron 25.0%
!!! CATTATTCTGTAGTTTTGTT+TGG - Chr1:61180281-61180300 None:intergenic 25.0%
!!! GATATCATTTTTTTTCGTGA+GGG - Chr1:61179934-61179953 None:intergenic 25.0%
!!! TAATGAAATTTTGAGATCAG+AGG + Chr1:61185984-61186003 MsG0180003363.01.T01:intron 25.0%
!!! TAGATTTTATGCTGACTTTT+GGG + Chr1:61185644-61185663 MsG0180003363.01.T01:intron 25.0%
!!! TGAGTAGATATTTTTGTACA+TGG - Chr1:61182496-61182515 None:intergenic 25.0%
!!! TGATATCATTTTTTTTCGTG+AGG - Chr1:61179935-61179954 None:intergenic 25.0%
!!! TGTGTATTTTAAGCAGTTAT+TGG + Chr1:61179533-61179552 MsG0180003363.01.T01:intron 25.0%
!!! TTGTTTTATGAAAGTCTTCA+TGG + Chr1:61180368-61180387 MsG0180003363.01.T01:intron 25.0%
!!! TTTCATCAAATGTTTTGACT+TGG + Chr1:61178523-61178542 MsG0180003363.01.T01:CDS 25.0%
!!! TTTTTTTTTTTTTGCTCCAG+CGG - Chr1:61183359-61183378 None:intergenic 25.0%
AAAATCATATACATGCTCCA+CGG - Chr1:61182765-61182784 None:intergenic 30.0%
AAAGGCTATGGTTATGTTAT+AGG + Chr1:61180609-61180628 MsG0180003363.01.T01:intron 30.0%
AAAGTAACCAAGACAGTTTA+CGG + Chr1:61182064-61182083 MsG0180003363.01.T01:intron 30.0%
AAATAGTTCAGGAACAAAGA+CGG + Chr1:61184572-61184591 MsG0180003363.01.T01:intron 30.0%
AAGATTTCTTACTCACGTTT+AGG + Chr1:61184438-61184457 MsG0180003363.01.T01:intron 30.0%
AATATGACAAGAGTTTCTCT+TGG - Chr1:61179196-61179215 None:intergenic 30.0%
AATTACTGTTAACCATGTGA+TGG - Chr1:61182106-61182125 None:intergenic 30.0%
AATTCCATTGTAGTACAGTT+AGG + Chr1:61179029-61179048 MsG0180003363.01.T01:intron 30.0%
ACACAAAGGGTTTCAAATAA+CGG + Chr1:61187047-61187066 MsG0180003363.01.T01:intron 30.0%
ACACATAATAGTCACACAAA+GGG + Chr1:61187034-61187053 MsG0180003363.01.T01:intron 30.0%
ACTGTATCTCGATGATATAT+AGG - Chr1:61186970-61186989 None:intergenic 30.0%
ACTTTCATAAAACAAAACCC+CGG - Chr1:61180363-61180382 None:intergenic 30.0%
AGAATATGAGAATAGTAGAG+TGG + Chr1:61184118-61184137 MsG0180003363.01.T01:intron 30.0%
AGATTTCTTACTCACGTTTA+GGG + Chr1:61184439-61184458 MsG0180003363.01.T01:intron 30.0%
AGTAAATGGTCCCTATTATA+CGG - Chr1:61187142-61187161 None:intergenic 30.0%
ATAATTTACTTTGTGGTGAC+AGG + Chr1:61178092-61178111 MsG0180003363.01.T01:intron 30.0%
ATACATTGTTCATCAAGTTC+CGG + Chr1:61180341-61180360 MsG0180003363.01.T01:CDS 30.0%
ATGACAAAATTTACTCTTGC+TGG + Chr1:61179439-61179458 MsG0180003363.01.T01:intron 30.0%
ATGATAAGACGACAAAAATG+TGG - Chr1:61184405-61184424 None:intergenic 30.0%
ATTACTGTTAACCATGTGAT+GGG - Chr1:61182105-61182124 None:intergenic 30.0%
ATTCCATTGTAGTACAGTTA+GGG + Chr1:61179030-61179049 MsG0180003363.01.T01:intron 30.0%
ATTCTGTGTCAAATTTGTAG+GGG - Chr1:61184103-61184122 None:intergenic 30.0%
ATTGGAAATAGAACGTCAAA+AGG + Chr1:61183715-61183734 MsG0180003363.01.T01:intron 30.0%
ATTTCAATATACATGCTCCA+CGG + Chr1:61183323-61183342 MsG0180003363.01.T01:intron 30.0%
ATTTCCAATGTCACATTTCT+AGG - Chr1:61183704-61183723 None:intergenic 30.0%
CAATATACATGAGCAACTAA+TGG - Chr1:61181270-61181289 None:intergenic 30.0%
CACAATAACTCTTGTCATAT+AGG + Chr1:61177577-61177596 MsG0180003363.01.T01:intron 30.0%
CTATCTTGATATATGATGGT+AGG - Chr1:61187173-61187192 None:intergenic 30.0%
CTATGGAGATATAAAAAGAG+AGG + Chr1:61179820-61179839 MsG0180003363.01.T01:intron 30.0%
CTGTATCTCGATGATATATA+GGG - Chr1:61186969-61186988 None:intergenic 30.0%
CTTAACATTGTAGTCAGAAA+TGG + Chr1:61183954-61183973 MsG0180003363.01.T01:intron 30.0%
CTTACATAAGCTGAAGAAAA+TGG - Chr1:61178890-61178909 None:intergenic 30.0%
CTTCACAAGTTGTGAAAAAA+TGG - Chr1:61184229-61184248 None:intergenic 30.0%
GAACCTTTGCAACAATAATA+TGG + Chr1:61185024-61185043 MsG0180003363.01.T01:intron 30.0%
GAATGACACAAATAAGGATA+TGG + Chr1:61186244-61186263 MsG0180003363.01.T01:intron 30.0%
GAGAGATTATCTTAGTTTCA+GGG - Chr1:61177551-61177570 None:intergenic 30.0%
GAGTACAATATCTTATACAG+GGG - Chr1:61186852-61186871 None:intergenic 30.0%
GCAAACTTTGAATCATATAG+TGG + Chr1:61185090-61185109 MsG0180003363.01.T01:intron 30.0%
GGTAGGGTTAATTAAGTAAA+TGG - Chr1:61187156-61187175 None:intergenic 30.0%
GTAAGTATAGCATCCATAAT+GGG + Chr1:61182296-61182315 MsG0180003363.01.T01:intron 30.0%
GTAGTGTGTAAAGATTCATT+TGG + Chr1:61179487-61179506 MsG0180003363.01.T01:intron 30.0%
GTATTTCAGCAAGGAAATTT+AGG - Chr1:61178309-61178328 None:intergenic 30.0%
GTGTGTGTGTGTATATATAT+TGG - Chr1:61183881-61183900 None:intergenic 30.0%
GTTAGAAAAGCAATCTTCTT+GGG + Chr1:61183482-61183501 MsG0180003363.01.T01:intron 30.0%
GTTATGATATACTGAACAAC+AGG + Chr1:61178771-61178790 MsG0180003363.01.T01:intron 30.0%
GTTTATACATGAGAATCTCA+TGG + Chr1:61178963-61178982 MsG0180003363.01.T01:intron 30.0%
TAAATCGTGTACCATAATAG+TGG + Chr1:61177927-61177946 MsG0180003363.01.T01:intron 30.0%
TAAGCTTAACAAGTGTTAGT+TGG - Chr1:61187009-61187028 None:intergenic 30.0%
TACAGAAATATAGGAAGACT+TGG - Chr1:61182249-61182268 None:intergenic 30.0%
TACATAAGCTGAAGAAAATG+GGG - Chr1:61178888-61178907 None:intergenic 30.0%
TATTCCTAGAAATGTGACAT+TGG + Chr1:61183697-61183716 MsG0180003363.01.T01:intron 30.0%
TGAAGTATAACAGAACCATA+TGG - Chr1:61185507-61185526 None:intergenic 30.0%
TGAGAGATTATCTTAGTTTC+AGG - Chr1:61177552-61177571 None:intergenic 30.0%
TGATATACAATTATGGACCA+TGG - Chr1:61185697-61185716 None:intergenic 30.0%
TGTAAGTATAGCATCCATAA+TGG + Chr1:61182295-61182314 MsG0180003363.01.T01:intron 30.0%
TGTACTACAATGGAATTTGA+TGG - Chr1:61179026-61179045 None:intergenic 30.0%
TGTGTGTGTATATATATTGG+TGG - Chr1:61183878-61183897 None:intergenic 30.0%
TGTTAAATGAAAAGAAAGGG+TGG + Chr1:61181510-61181529 MsG0180003363.01.T01:intron 30.0%
TGTTAGAAAAGCAATCTTCT+TGG + Chr1:61183481-61183500 MsG0180003363.01.T01:intron 30.0%
TTATGGCTATGATATATGTC+TGG + Chr1:61180632-61180651 MsG0180003363.01.T01:intron 30.0%
TTCCATATAGACAGATGAAA+AGG - Chr1:61179606-61179625 None:intergenic 30.0%
TTGGAAATAGAACGTCAAAA+GGG + Chr1:61183716-61183735 MsG0180003363.01.T01:intron 30.0%
TTTGTTCTGTATACTTGGAA+CGG - Chr1:61182707-61182726 None:intergenic 30.0%
! AAAATCAAAGAGGTACATGT+TGG + Chr1:61185453-61185472 MsG0180003363.01.T01:intron 30.0%
! AAGCTCGTACAATTTTTATG+AGG + Chr1:61186449-61186468 MsG0180003363.01.T01:intron 30.0%
! AGCTCGTACAATTTTTATGA+GGG + Chr1:61186450-61186469 MsG0180003363.01.T01:intron 30.0%
! ATTTAGCTAAATTTTGTGGC+TGG - Chr1:61184954-61184973 None:intergenic 30.0%
! CAAAAGCACAATAGTGATAA+TGG - Chr1:61178571-61178590 None:intergenic 30.0%
! CTTAATTTGAGTCAAGAGTA+TGG - Chr1:61181377-61181396 None:intergenic 30.0%
! CTTTGTTCCTGAACTATTTT+CGG - Chr1:61184571-61184590 None:intergenic 30.0%
! GAATTGATAATTGCAGTTGT+TGG + Chr1:61182378-61182397 MsG0180003363.01.T01:intron 30.0%
! GAGAGTACAATATCTTATAC+AGG - Chr1:61186854-61186873 None:intergenic 30.0%
! GCTAAACTGCATTATTTTCT+TGG + Chr1:61184060-61184079 MsG0180003363.01.T01:intron 30.0%
! GTAGTATTCTTTTTCTTGAG+AGG - Chr1:61180964-61180983 None:intergenic 30.0%
! GTGACTATGTTGTTATTAAG+TGG + Chr1:61186341-61186360 MsG0180003363.01.T01:intron 30.0%
! TCTTTTCTTTTCATTCGAAC+TGG + Chr1:61180545-61180564 MsG0180003363.01.T01:CDS 30.0%
! TGATTCAAAGTTTGCTTAGA+AGG - Chr1:61185085-61185104 None:intergenic 30.0%
! TGGCTATACAGTTTTCAATT+TGG + Chr1:61181100-61181119 MsG0180003363.01.T01:intron 30.0%
! TTCCTTTTCATCTGTCTATA+TGG + Chr1:61179601-61179620 MsG0180003363.01.T01:intron 30.0%
! TTTAGCTAAATTTTGTGGCT+GGG - Chr1:61184953-61184972 None:intergenic 30.0%
! TTTTACCAGTGTTGTCAAAA+TGG - Chr1:61177982-61178001 None:intergenic 30.0%
!! AAACTTTTATTTGTGTGCCA+AGG - Chr1:61179897-61179916 None:intergenic 30.0%
!! ATGATTGTGCAGTGTTTTTA+TGG + Chr1:61183609-61183628 MsG0180003363.01.T01:intron 30.0%
!! CTCTTCTGTTGTTTGATTTT+TGG + Chr1:61178415-61178434 MsG0180003363.01.T01:CDS 30.0%
!! CTTAAAATGCTGTTACTTTG+TGG + Chr1:61181982-61182001 MsG0180003363.01.T01:intron 30.0%
!! GAATACTTTAATTAGCCTTG+AGG + Chr1:61183746-61183765 MsG0180003363.01.T01:intron 30.0%
!! GGAATTTTGAAAAGTGGTTT+AGG + Chr1:61181796-61181815 MsG0180003363.01.T01:intron 30.0%
!! TAGAGTATGAAGTTTTGGTA+AGG - Chr1:61184880-61184899 None:intergenic 30.0%
!! TCAGTTGGAATTTTGAAAAG+TGG + Chr1:61181790-61181809 MsG0180003363.01.T01:intron 30.0%
!! TCTTGATTTTGAAAAGGCTA+TGG + Chr1:61180597-61180616 MsG0180003363.01.T01:intron 30.0%
!! TGCTTCTGAAACACAAAATT+AGG + Chr1:61180682-61180701 MsG0180003363.01.T01:intron 30.0%
!! TTATTTTGTCTTATGTGGAC+TGG + Chr1:61178225-61178244 MsG0180003363.01.T01:CDS 30.0%
!! TTCTGTTGTTTGATTTTTGG+AGG + Chr1:61178418-61178437 MsG0180003363.01.T01:CDS 30.0%
!!! AGTTGTAATTTTGGGTTCTT+AGG - Chr1:61185144-61185163 None:intergenic 30.0%
!!! GCGTTTTATTTTGTCTTATG+TGG + Chr1:61178220-61178239 MsG0180003363.01.T01:CDS 30.0%
!!! GTTGGGGATTTTTTTAAACA+TGG - Chr1:61183008-61183027 None:intergenic 30.0%
!!! GTTGTAATTTTGGGTTCTTA+GGG - Chr1:61185143-61185162 None:intergenic 30.0%
!!! GTTTGTAGGCTTTTAAGTTA+TGG + Chr1:61182552-61182571 MsG0180003363.01.T01:intron 30.0%
!!! TGTGGTACTGAATTTTTTGA+GGG + Chr1:61182000-61182019 MsG0180003363.01.T01:intron 30.0%
!!! TTGTGGTACTGAATTTTTTG+AGG + Chr1:61181999-61182018 MsG0180003363.01.T01:intron 30.0%
AAAAAAATCCCCAACTGTGA+AGG + Chr1:61183013-61183032 MsG0180003363.01.T01:intron 35.0%
AAAACCAGAGTCTTAGTTGA+TGG + Chr1:61181398-61181417 MsG0180003363.01.T01:intron 35.0%
AAACCATAGCTTCCAATCAA+GGG + Chr1:61182917-61182936 MsG0180003363.01.T01:intron 35.0%
AAATTTACTCTTGCTGGAAG+TGG + Chr1:61179445-61179464 MsG0180003363.01.T01:intron 35.0%
AACCATATGGCTAAATCAAG+AGG - Chr1:61185494-61185513 None:intergenic 35.0%
AACGTCGAATGACACAAATA+AGG + Chr1:61186238-61186257 MsG0180003363.01.T01:intron 35.0%
AATAGTTCAGGAACAAAGAC+GGG + Chr1:61184573-61184592 MsG0180003363.01.T01:intron 35.0%
AATCCCTAACTGTACTACAA+TGG - Chr1:61179036-61179055 None:intergenic 35.0%
ACATAGATTTGACCATCTCA+CGG - Chr1:61187373-61187392 None:intergenic 35.0%
ACGCCATATTATTGTTGCAA+AGG - Chr1:61185030-61185049 None:intergenic 35.0%
ACGTTGTATATTGTTCCATG+CGG - Chr1:61186223-61186242 None:intergenic 35.0%
AGCAGTTTACTGTGAACATA+GGG - Chr1:61179696-61179715 None:intergenic 35.0%
AGCGTGTTAGACATTAAATG+TGG - Chr1:61184757-61184776 None:intergenic 35.0%
AGTATGACACGTCTTGAATA+TGG - Chr1:61186078-61186097 None:intergenic 35.0%
AGTCATTCCGAAAATAGTTC+AGG + Chr1:61184561-61184580 MsG0180003363.01.T01:intron 35.0%
ATGAAAAGAAAGGGTGGTTT+AGG + Chr1:61181516-61181535 MsG0180003363.01.T01:intron 35.0%
ATTGGTTGATTGTCCATGAT+TGG - Chr1:61183130-61183149 None:intergenic 35.0%
CAAAACGTCATATTGACACA+TGG + Chr1:61182617-61182636 MsG0180003363.01.T01:intron 35.0%
CAAAGAATCATAGCACTGTA+TGG - Chr1:61178865-61178884 None:intergenic 35.0%
CAATTATTGTCAACTCACTC+CGG + Chr1:61181719-61181738 MsG0180003363.01.T01:intron 35.0%
CACACATAATAGTCACACAA+AGG + Chr1:61187033-61187052 MsG0180003363.01.T01:intron 35.0%
CAGAAAACAGTATTTCAGCA+AGG - Chr1:61178318-61178337 None:intergenic 35.0%
CATATTATGCACAGCACATA+TGG + Chr1:61180062-61180081 MsG0180003363.01.T01:intron 35.0%
CCAGTCTCTGTATAATATCA+TGG + Chr1:61181023-61181042 MsG0180003363.01.T01:intron 35.0%
CCAGTTAATAAATCTCGTCA+CGG - Chr1:61178493-61178512 None:intergenic 35.0%
CCATGATATTATACAGAGAC+TGG - Chr1:61181026-61181045 None:intergenic 35.0%
CGCTTCATGATTCTTATACA+TGG + Chr1:61183061-61183080 MsG0180003363.01.T01:intron 35.0%
CTTCTCTGTGAATACAATAC+AGG - Chr1:61181309-61181328 None:intergenic 35.0%
GAAGAAGTTATAACAGGAAC+AGG + Chr1:61179738-61179757 MsG0180003363.01.T01:intron 35.0%
GAATCTTAGTCATCATACCA+TGG + Chr1:61185677-61185696 MsG0180003363.01.T01:intron 35.0%
GACAACACTGGTAAAACTTT+AGG + Chr1:61177986-61178005 MsG0180003363.01.T01:intron 35.0%
GACAGATGAAAAGGAATCAA+AGG - Chr1:61179597-61179616 None:intergenic 35.0%
GACTACTCATTACATATTCC+AGG + Chr1:61177742-61177761 MsG0180003363.01.T01:intron 35.0%
GCGTGTTAGACATTAAATGT+GGG - Chr1:61184756-61184775 None:intergenic 35.0%
GTATCACTATCACATTCACA+GGG + Chr1:61178184-61178203 MsG0180003363.01.T01:CDS 35.0%
GTATTGTATTCACAGAGAAG+TGG + Chr1:61181309-61181328 MsG0180003363.01.T01:CDS 35.0%
GTCAAAATTATGCTCTTCTG+TGG + Chr1:61178252-61178271 MsG0180003363.01.T01:CDS 35.0%
GTCTCAAAAGCCGTATAATA+GGG + Chr1:61187129-61187148 MsG0180003363.01.T01:intron 35.0%
GTGGAAATCATGGTTAAATG+TGG + Chr1:61187098-61187117 MsG0180003363.01.T01:intron 35.0%
TACATTGTTCATCAAGTTCC+GGG + Chr1:61180342-61180361 MsG0180003363.01.T01:CDS 35.0%
TCATACTCTACCACTTAAGT+GGG + Chr1:61184890-61184909 MsG0180003363.01.T01:intron 35.0%
TCCTGTAGACATGATTCATT+TGG - Chr1:61180486-61180505 None:intergenic 35.0%
TCTCCTAAGAATTGAAGAGA+CGG - Chr1:61186911-61186930 None:intergenic 35.0%
TGAGAATAACATGCAAGTGT+TGG + Chr1:61184376-61184395 MsG0180003363.01.T01:intron 35.0%
TGGAAATAGAACGTCAAAAG+GGG + Chr1:61183717-61183736 MsG0180003363.01.T01:intron 35.0%
TGGACATTTCTTATGATGGT+GGG - Chr1:61184918-61184937 None:intergenic 35.0%
TGGCTGGGTAAGATAAAATT+TGG - Chr1:61184938-61184957 None:intergenic 35.0%
TGTACATGGTACTTTGACAA+AGG - Chr1:61182482-61182501 None:intergenic 35.0%
TGTATCACTATCACATTCAC+AGG + Chr1:61178183-61178202 MsG0180003363.01.T01:CDS 35.0%
TTATGAAAGTCTTCATGGCA+TGG + Chr1:61180373-61180392 MsG0180003363.01.T01:intron 35.0%
TTCACTACGATTTGTAAGGT+CGG - Chr1:61186941-61186960 None:intergenic 35.0%
TTCATACTCTACCACTTAAG+TGG + Chr1:61184889-61184908 MsG0180003363.01.T01:intron 35.0%
TTCTATGTTCTCACCAATCA+TGG + Chr1:61183114-61183133 MsG0180003363.01.T01:intron 35.0%
TTCTGCACTCTACAATCAAA+TGG - Chr1:61180138-61180157 None:intergenic 35.0%
TTCTGCAGAGATGAAAACTA+GGG + Chr1:61184534-61184553 MsG0180003363.01.T01:intron 35.0%
TTGAGTCTAATGAGTTAGAG+AGG + Chr1:61186291-61186310 MsG0180003363.01.T01:intron 35.0%
TTGGACATTTCTTATGATGG+TGG - Chr1:61184919-61184938 None:intergenic 35.0%
TTTCCGTCTCTTCAATTCTT+AGG + Chr1:61186905-61186924 MsG0180003363.01.T01:intron 35.0%
TTTCTGCAGAGATGAAAACT+AGG + Chr1:61184533-61184552 MsG0180003363.01.T01:intron 35.0%
! AGTGGTAGAGTATGAAGTTT+TGG - Chr1:61184885-61184904 None:intergenic 35.0%
! AGTTTGCTTAGAAGGTCAAA+TGG - Chr1:61185077-61185096 None:intergenic 35.0%
! CTCGTACAATTTTTATGAGG+GGG + Chr1:61186452-61186471 MsG0180003363.01.T01:intron 35.0%
! CTGTTTTCTGTATGAAACAG+TGG + Chr1:61178328-61178347 MsG0180003363.01.T01:intron 35.0%
! GCTCGTACAATTTTTATGAG+GGG + Chr1:61186451-61186470 MsG0180003363.01.T01:intron 35.0%
!! TACTGATTTCCTTCACAGTT+GGG - Chr1:61183025-61183044 None:intergenic 35.0%
!! TTAGGTGCTGTGTGTTTTAT+GGG + Chr1:61178710-61178729 MsG0180003363.01.T01:intron 35.0%
!! TTTAGGTGCTGTGTGTTTTA+TGG + Chr1:61178709-61178728 MsG0180003363.01.T01:intron 35.0%
!!! AGGCAACATTCATTTTTTGG+TGG + Chr1:61178438-61178457 MsG0180003363.01.T01:CDS 35.0%
!!! GAAATTTTGAGATCAGAGGA+TGG + Chr1:61185988-61186007 MsG0180003363.01.T01:intron 35.0%
!!! GGGGAGGAATGTATTTTTTT+AGG + Chr1:61177818-61177837 MsG0180003363.01.T01:intron 35.0%
!!! GTATTTTGGTAAAGTCCTCA+GGG - Chr1:61184630-61184649 None:intergenic 35.0%
!!! TGGAGGCAACATTCATTTTT+TGG + Chr1:61178435-61178454 MsG0180003363.01.T01:CDS 35.0%
AAACACCAACTCCTCAGTAA+GGG - Chr1:61178800-61178819 None:intergenic 40.0%
AACCATAGCTTCCAATCAAG+GGG + Chr1:61182918-61182937 MsG0180003363.01.T01:intron 40.0%
AAGTGTGAAGTGCAGGATTA+AGG - Chr1:61180792-61180811 None:intergenic 40.0%
AATCAAGGGGTTCAGTTTCA+AGG + Chr1:61182931-61182950 MsG0180003363.01.T01:intron 40.0%
ACAACTTTGATATGTTGGGG+AGG + Chr1:61177802-61177821 MsG0180003363.01.T01:intron 40.0%
ACAAGAGTTTCTCTTGGAAG+TGG - Chr1:61179190-61179209 None:intergenic 40.0%
ACAGTTAGGGATTTGAACAG+TGG + Chr1:61179043-61179062 MsG0180003363.01.T01:intron 40.0%
ACATAGTCCTTTCTGAGTCT+AGG + Chr1:61181175-61181194 MsG0180003363.01.T01:intron 40.0%
ACATTGTTCATCAAGTTCCG+GGG + Chr1:61180343-61180362 MsG0180003363.01.T01:CDS 40.0%
AGAAGGTCAAATGGCACTTA+TGG - Chr1:61185068-61185087 None:intergenic 40.0%
AGACAAAGTAGAATGTCGCA+AGG + Chr1:61181908-61181927 MsG0180003363.01.T01:intron 40.0%
AGACTCAGAAAGGACTATGT+TGG - Chr1:61181175-61181194 None:intergenic 40.0%
AGAGGGTCACTTCAATTCAA+AGG - Chr1:61180946-61180965 None:intergenic 40.0%
AGCAATCTTCTTGGGAAGAA+TGG + Chr1:61183490-61183509 MsG0180003363.01.T01:intron 40.0%
ATAGTTCAGGAACAAAGACG+GGG + Chr1:61184574-61184593 MsG0180003363.01.T01:intron 40.0%
ATGAAGGCTGCTATGGTTAT+AGG + Chr1:61180298-61180317 MsG0180003363.01.T01:CDS 40.0%
ATGCTTCCTATACTTCTCTG+TGG + Chr1:61178829-61178848 MsG0180003363.01.T01:CDS 40.0%
ATTAGAGAGGTCAAAGCAAG+AGG - Chr1:61178369-61178388 None:intergenic 40.0%
CAAACAACAGAAGAGACTTG+AGG - Chr1:61178410-61178429 None:intergenic 40.0%
CAAACCATAGCTTCCAATCA+AGG + Chr1:61182916-61182935 MsG0180003363.01.T01:intron 40.0%
CAATAATATGGCGTCAGTGT+TGG + Chr1:61185036-61185055 MsG0180003363.01.T01:intron 40.0%
CACCTCTTGATTTAGCCATA+TGG + Chr1:61185489-61185508 MsG0180003363.01.T01:intron 40.0%
CAGAATAATGAAGGCTGCTA+TGG + Chr1:61180291-61180310 MsG0180003363.01.T01:CDS 40.0%
CAGCAGTTTACTGTGAACAT+AGG - Chr1:61179697-61179716 None:intergenic 40.0%
CCGTGACGAGATTTATTAAC+TGG + Chr1:61178490-61178509 MsG0180003363.01.T01:CDS 40.0%
CGATACCCTTCATATCTATG+GGG - Chr1:61186829-61186848 None:intergenic 40.0%
CTACTGTTGAGTATGTGTTG+AGG - Chr1:61182821-61182840 None:intergenic 40.0%
CTGAAATGGTCCATAATGGT+GGG + Chr1:61184309-61184328 MsG0180003363.01.T01:intron 40.0%
CTTGATTGGAAGCTATGGTT+TGG - Chr1:61182918-61182937 None:intergenic 40.0%
GAAGCCAAGTAATCCCATTA+TGG - Chr1:61182312-61182331 None:intergenic 40.0%
GAAGGTCAAATGGCACTTAT+GGG - Chr1:61185067-61185086 None:intergenic 40.0%
GACAAAGTAGAATGTCGCAA+GGG + Chr1:61181909-61181928 MsG0180003363.01.T01:intron 40.0%
GACTTGGAGAAACTATGTTG+TGG + Chr1:61178539-61178558 MsG0180003363.01.T01:CDS 40.0%
GAGAGAACAAACAACAGAAG+AGG - Chr1:61186180-61186199 None:intergenic 40.0%
GATAATTGCAGTTGTTGGCA+AGG + Chr1:61182383-61182402 MsG0180003363.01.T01:intron 40.0%
GCAGTTTACTGTGAACATAG+GGG - Chr1:61179695-61179714 None:intergenic 40.0%
GCCAAATGAATCATGTCTAC+AGG + Chr1:61180482-61180501 MsG0180003363.01.T01:intron 40.0%
GCGATACCCTTCATATCTAT+GGG - Chr1:61186830-61186849 None:intergenic 40.0%
GCTACTCCAAACAATTCTGT+TGG - Chr1:61186722-61186741 None:intergenic 40.0%
GCTGTAAGCATAGAACAGTT+TGG + Chr1:61180010-61180029 MsG0180003363.01.T01:intron 40.0%
GGAAATAGAACGTCAAAAGG+GGG + Chr1:61183718-61183737 MsG0180003363.01.T01:intron 40.0%
GGAAGAACTTGACAACGATT+TGG + Chr1:61183204-61183223 MsG0180003363.01.T01:intron 40.0%
GGTCTCAAAAGCCGTATAAT+AGG + Chr1:61187128-61187147 MsG0180003363.01.T01:intron 40.0%
GTATGCAGATTGGGAAAACA+GGG + Chr1:61178274-61178293 MsG0180003363.01.T01:CDS 40.0%
GTTATGATGGCAGAATCTTG+AGG + Chr1:61185372-61185391 MsG0180003363.01.T01:intron 40.0%
TAAACACCAACTCCTCAGTA+AGG - Chr1:61178801-61178820 None:intergenic 40.0%
TACCAGTGTTGTCAAAATGG+TGG - Chr1:61177979-61177998 None:intergenic 40.0%
TCAACATCAGAGCTCTATTG+TGG + Chr1:61187332-61187351 MsG0180003363.01.T01:CDS 40.0%
TCTGTGAATACAATACAGGC+AGG - Chr1:61181305-61181324 None:intergenic 40.0%
TCTTCTGTGGTATGCAGATT+GGG + Chr1:61178265-61178284 MsG0180003363.01.T01:CDS 40.0%
TGCCACCTTAACGATATTTG+AGG + Chr1:61187470-61187489 MsG0180003363.01.T01:CDS 40.0%
TGGTATGTGATGTTGACCTA+TGG + Chr1:61180565-61180584 MsG0180003363.01.T01:intron 40.0%
TGTGAATGCGCATGCAATTT+AGG + Chr1:61178692-61178711 MsG0180003363.01.T01:intron 40.0%
TTCCTATACTTCTCTGTGGA+GGG + Chr1:61178833-61178852 MsG0180003363.01.T01:CDS 40.0%
TTCGCATCTCATATGCAACA+TGG + Chr1:61178739-61178758 MsG0180003363.01.T01:intron 40.0%
TTCTGATCATCACACGTTCA+AGG - Chr1:61177463-61177482 None:intergenic 40.0%
TTGAAACTGAACCCCTTGAT+TGG - Chr1:61182932-61182951 None:intergenic 40.0%
TTGACCTCTCTAATGTATGC+TGG + Chr1:61178375-61178394 MsG0180003363.01.T01:CDS 40.0%
TTGGCTACACTGTTGTCTTT+GGG + Chr1:61180513-61180532 MsG0180003363.01.T01:CDS 40.0%
TTGGCTGAAATGGTCCATAA+TGG + Chr1:61184305-61184324 MsG0180003363.01.T01:intron 40.0%
TTTCGGGGTAATAGTCACTT+TGG - Chr1:61177769-61177788 None:intergenic 40.0%
TTTCTGTATGAAACAGTGGC+AGG + Chr1:61178332-61178351 MsG0180003363.01.T01:intron 40.0%
! AAGAATGGATCTGGAACGAA+TGG - Chr1:61183996-61184015 None:intergenic 40.0%
! AATGACATTTTTGCCCTCGA+CGG - Chr1:61183435-61183454 None:intergenic 40.0%
! ACTGATTTCCTTCACAGTTG+GGG - Chr1:61183024-61183043 None:intergenic 40.0%
! ATGGAAGCACATTATTTGGC+CGG - Chr1:61181741-61181760 None:intergenic 40.0%
! CTGTACATTTTGGGCGTTTA+TGG + Chr1:61178132-61178151 MsG0180003363.01.T01:CDS 40.0%
! GATATGGGCTGCAATGAATT+AGG + Chr1:61186260-61186279 MsG0180003363.01.T01:intron 40.0%
! GCATCCATAATGGGATTACT+TGG + Chr1:61182305-61182324 MsG0180003363.01.T01:intron 40.0%
! GGAAATGACATTTTTACCCC+CGG + Chr1:61182638-61182657 MsG0180003363.01.T01:intron 40.0%
! GGACATTTCTTATGATGGTG+GGG - Chr1:61184917-61184936 None:intergenic 40.0%
! GTTTTCTGCTTGTACTTTGC+AGG + Chr1:61181231-61181250 MsG0180003363.01.T01:intron 40.0%
!! CATGGTTTGGTGACATTAAG+AGG + Chr1:61185740-61185759 MsG0180003363.01.T01:intron 40.0%
!! CTACTGATTTCCTTCACAGT+TGG - Chr1:61183026-61183045 None:intergenic 40.0%
!! CTGACTTTTGGGTCTTCAAA+GGG + Chr1:61185655-61185674 MsG0180003363.01.T01:intron 40.0%
!! TAATTAGCCTTGAGGCTTGA+AGG + Chr1:61183754-61183773 MsG0180003363.01.T01:intron 40.0%
!! TACTGAGGAGTTGGTGTTTA+GGG + Chr1:61178801-61178820 MsG0180003363.01.T01:CDS 40.0%
!! TGATGACTCGCTAGTTTGTT+AGG + Chr1:61186386-61186405 MsG0180003363.01.T01:intron 40.0%
!! TTACTGAGGAGTTGGTGTTT+AGG + Chr1:61178800-61178819 MsG0180003363.01.T01:CDS 40.0%
!!! AGGGACTTGCTGTACATTTT+GGG + Chr1:61178123-61178142 MsG0180003363.01.T01:intron 40.0%
!!! ATTTTGGGTTCTTAGGGTGA+AGG - Chr1:61185137-61185156 None:intergenic 40.0%
!!! GGTATTTTGGTAAAGTCCTC+AGG - Chr1:61184631-61184650 None:intergenic 40.0%
!!! TAGGGACTTGCTGTACATTT+TGG + Chr1:61178122-61178141 MsG0180003363.01.T01:intron 40.0%
!!! TTTTGTCTTATGTGGACTGG+TGG + Chr1:61178228-61178247 MsG0180003363.01.T01:CDS 40.0%
AAAGCTTAGTGGCATGCAGT+TGG - Chr1:61178605-61178624 None:intergenic 45.0%
AACACCAACTCCTCAGTAAG+GGG - Chr1:61178799-61178818 None:intergenic 45.0%
AACCCCTTGATTGGAAGCTA+TGG - Chr1:61182923-61182942 None:intergenic 45.0%
ACTACGATTTGTAAGGTCGG+AGG - Chr1:61186938-61186957 None:intergenic 45.0%
AGAGCCAGCATACATTAGAG+AGG - Chr1:61178382-61178401 None:intergenic 45.0%
AGTGGATCCTCATTATGTGC+AGG + Chr1:61179463-61179482 MsG0180003363.01.T01:intron 45.0%
ATCATACCCACCATCTTACG+AGG + Chr1:61184597-61184616 MsG0180003363.01.T01:intron 45.0%
ATGAGTTAGAGAGGCCCAAA+TGG + Chr1:61186300-61186319 MsG0180003363.01.T01:intron 45.0%
ATGCCACCCCATAGATATGA+AGG + Chr1:61186820-61186839 MsG0180003363.01.T01:intron 45.0%
ATGGTTAAATGTGGCCGATG+TGG + Chr1:61187107-61187126 MsG0180003363.01.T01:intron 45.0%
CACTACACCTGCACATAATG+AGG - Chr1:61179473-61179492 None:intergenic 45.0%
CCAAAGTGACTATTACCCTG+AGG - Chr1:61177439-61177458 None:intergenic 45.0%
CCTCAGGGTAATAGTCACTT+TGG + Chr1:61177436-61177455 MsG0180003363.01.T01:intron 45.0%
CTCAGAACCGTAAACTGTCT+TGG - Chr1:61182074-61182093 None:intergenic 45.0%
CTCTTCTGTGGTATGCAGAT+TGG + Chr1:61178264-61178283 MsG0180003363.01.T01:CDS 45.0%
CTTCCTATACTTCTCTGTGG+AGG + Chr1:61178832-61178851 MsG0180003363.01.T01:CDS 45.0%
CTTGGCTACACTGTTGTCTT+TGG + Chr1:61180512-61180531 MsG0180003363.01.T01:CDS 45.0%
GAACGGTAGTTAACTACCGT+CGG - Chr1:61182690-61182709 None:intergenic 45.0%
GAGATTCTGAGCTTGTGACA+TGG + Chr1:61185722-61185741 MsG0180003363.01.T01:intron 45.0%
GCTGAAATGGTCCATAATGG+TGG + Chr1:61184308-61184327 MsG0180003363.01.T01:intron 45.0%
GGCACATTTGAGGGAATCAA+AGG - Chr1:61178472-61178491 None:intergenic 45.0%
GGCGATACCCTTCATATCTA+TGG - Chr1:61186831-61186850 None:intergenic 45.0%
GGTATGCAGATTGGGAAAAC+AGG + Chr1:61178273-61178292 MsG0180003363.01.T01:CDS 45.0%
GTTGTCCCATTCAAGGTTTG+TGG + Chr1:61184499-61184518 MsG0180003363.01.T01:intron 45.0%
TAACTGCCGCTGGATTTATC+CGG - Chr1:61183408-61183427 None:intergenic 45.0%
TACCCTTCATATCTATGGGG+TGG - Chr1:61186826-61186845 None:intergenic 45.0%
TACTCACCATGTGATCCACT+CGG - Chr1:61178161-61178180 None:intergenic 45.0%
TCATATCTATGGGGTGGCAT+TGG - Chr1:61186820-61186839 None:intergenic 45.0%
TCATTGGGAAAAGAAGCCAG+AGG - Chr1:61182334-61182353 None:intergenic 45.0%
TCCCATTCAAGGTTTGTGGA+CGG + Chr1:61184503-61184522 MsG0180003363.01.T01:intron 45.0%
TCCGTCCACAAACCTTGAAT+GGG - Chr1:61184507-61184526 None:intergenic 45.0%
TCTGAGCTTGTGACATGGTT+TGG + Chr1:61185727-61185746 MsG0180003363.01.T01:intron 45.0%
TCTGTCTAAGTGTGAAGTGC+AGG - Chr1:61180799-61180818 None:intergenic 45.0%
TGCCACCCCATAGATATGAA+GGG + Chr1:61186821-61186840 MsG0180003363.01.T01:intron 45.0%
TGGTCCATCAACTAAGACTC+TGG - Chr1:61181405-61181424 None:intergenic 45.0%
TTGAATGGGACAACCCTCAA+GGG - Chr1:61184493-61184512 None:intergenic 45.0%
TTTGGTAAAGTCCTCAGGGA+TGG - Chr1:61184626-61184645 None:intergenic 45.0%
! AACCCTCCACAGAGAAGTAT+AGG - Chr1:61178838-61178857 None:intergenic 45.0%
! AATGACATTTTTACCCCCGG+CGG + Chr1:61182641-61182660 MsG0180003363.01.T01:intron 45.0%
! ACAAATCTGGGGCTGTCATT+GGG - Chr1:61182349-61182368 None:intergenic 45.0%
! CAGAAAGGACTATGTTGGCT+TGG - Chr1:61181170-61181189 None:intergenic 45.0%
! GAATCATGAAGCGCTACATG+TGG - Chr1:61183054-61183073 None:intergenic 45.0%
! GGTAATAGTCACTTTGGTCC+TGG - Chr1:61177461-61177442 None:intergenic 45.0%
! TAATATGGCGTCAGTGTTGG+TGG + Chr1:61185039-61185058 MsG0180003363.01.T01:intron 45.0%
! TACAAATCTGGGGCTGTCAT+TGG - Chr1:61182350-61182369 None:intergenic 45.0%
!! ACAGTTTACGGTTCTGAGTG+TGG + Chr1:61182076-61182095 MsG0180003363.01.T01:intron 45.0%
!! AGCCACCATTTTGACAACAC+TGG + Chr1:61177974-61177993 MsG0180003363.01.T01:intron 45.0%
!! GCTGACTTTTGGGTCTTCAA+AGG + Chr1:61185654-61185673 MsG0180003363.01.T01:intron 45.0%
!! TCCATAATGGTGGGTCATCA+GGG + Chr1:61184318-61184337 MsG0180003363.01.T01:intron 45.0%
!!! AGGGACTATTTTGACCAACG+TGG + Chr1:61177669-61177688 MsG0180003363.01.T01:intron 45.0%
!!! TACGGCTTTTGAGACCACAT+CGG - Chr1:61187124-61187143 None:intergenic 45.0%
!! TTCAAAAAATAAATAAAATA+AGG + Chr1:61184149-61184168 MsG0180003363.01.T01:intron 5.0%
!!! AAATTATATTTTCATTTAAA+TGG - Chr1:61184834-61184853 None:intergenic 5.0%
!!! AATTATATTTTCATTTAAAT+GGG - Chr1:61184833-61184852 None:intergenic 5.0%
!!! ATAGTTTTTTTTTTTTTTTT+TGG + Chr1:61183782-61183801 MsG0180003363.01.T01:intron 5.0%
!!! ATTTTATTTATTTTTTGAAA+GGG - Chr1:61184148-61184167 None:intergenic 5.0%
!!! TATTTTATTTATTTTTTGAA+AGG - Chr1:61184149-61184168 None:intergenic 5.0%
!!! TTGATTTTAATTAAATATTT+TGG + Chr1:61184286-61184305 MsG0180003363.01.T01:intron 5.0%
!!! TTTTATTTCTTTTTTATATT+TGG - Chr1:61186478-61186497 None:intergenic 5.0%
ACCTCAATGATGGTCATCGC+CGG - Chr1:61187446-61187465 None:intergenic 50.0%
AGACAACAGTGTAGCCAAGC+TGG - Chr1:61180511-61180530 None:intergenic 50.0%
AGAGCTCTATTGTGGACCAC+CGG + Chr1:61187340-61187359 MsG0180003363.01.T01:CDS 50.0%
AGCGGTAGTTAATTACCGCC+GGG - Chr1:61182659-61182678 None:intergenic 50.0%
AGCTTCAGTGAGTGAGATGC+AGG + Chr1:61185765-61185784 MsG0180003363.01.T01:intron 50.0%
ATCTCGTCACGGCACATTTG+AGG - Chr1:61178482-61178501 None:intergenic 50.0%
ATGGAGTCCTCGTAAGATGG+TGG - Chr1:61184607-61184626 None:intergenic 50.0%
ATGTCTACAGGACTCCAGCT+TGG + Chr1:61180494-61180513 MsG0180003363.01.T01:intron 50.0%
ATTGCTGCCTTCAAGCCTCA+AGG - Chr1:61183764-61183783 None:intergenic 50.0%
CAGCGGTAGTTAATTACCGC+CGG - Chr1:61182660-61182679 None:intergenic 50.0%
CTACCGCTGGATTTATCCGA+CGG + Chr1:61182671-61182690 MsG0180003363.01.T01:intron 50.0%
CTACCGTCGGATAAATCCAG+CGG - Chr1:61182677-61182696 None:intergenic 50.0%
CTCCGTCCACAAACCTTGAA+TGG - Chr1:61184508-61184527 None:intergenic 50.0%
CTTCAGTGAGTGAGATGCAG+GGG + Chr1:61185767-61185786 MsG0180003363.01.T01:intron 50.0%
CTTGAATGGGACAACCCTCA+AGG - Chr1:61184494-61184513 None:intergenic 50.0%
CTTGAGGGTTGTCCCATTCA+AGG + Chr1:61184492-61184511 MsG0180003363.01.T01:CDS 50.0%
GAACGGTAGTTAACTACCGC+CGG + Chr1:61183386-61183405 MsG0180003363.01.T01:intron 50.0%
GCATGCAAAGATCCCCTTGA+GGG + Chr1:61184477-61184496 MsG0180003363.01.T01:CDS 50.0%
GCTTCAGTGAGTGAGATGCA+GGG + Chr1:61185766-61185785 MsG0180003363.01.T01:intron 50.0%
GGTAAGGATCTCCGCCTATT+AGG - Chr1:61184864-61184883 None:intergenic 50.0%
GTGGCAGTCAACCTCAATGA+TGG - Chr1:61187456-61187475 None:intergenic 50.0%
GTGGTGACAGGTGCAAACTA+GGG + Chr1:61178104-61178123 MsG0180003363.01.T01:intron 50.0%
GTTGGCAAGGATACTGCTCA+TGG + Chr1:61182396-61182415 MsG0180003363.01.T01:intron 50.0%
TCCCTGATGACCCACCATTA+TGG - Chr1:61184322-61184341 None:intergenic 50.0%
TCTCGTCACGGCACATTTGA+GGG - Chr1:61178481-61178500 None:intergenic 50.0%
TCTCTGATTGTGCACCACGT+TGG - Chr1:61177686-61177705 None:intergenic 50.0%
TGAATGGGACAACCCTCAAG+GGG - Chr1:61184492-61184511 None:intergenic 50.0%
TGCATGCAAAGATCCCCTTG+AGG + Chr1:61184476-61184495 MsG0180003363.01.T01:CDS 50.0%
TGGAGTCCTCGTAAGATGGT+GGG - Chr1:61184606-61184625 None:intergenic 50.0%
TGGGATTACTTGGCTTCCTC+TGG + Chr1:61182315-61182334 MsG0180003363.01.T01:intron 50.0%
TGTGGTGACAGGTGCAAACT+AGG + Chr1:61178103-61178122 MsG0180003363.01.T01:intron 50.0%
! AGAGCTCTGATGTTGACCAG+CGG - Chr1:61187328-61187347 None:intergenic 50.0%
!! GTCCATAATGGTGGGTCATC+AGG + Chr1:61184317-61184336 MsG0180003363.01.T01:intron 50.0%
!! GTTTACGGTTCTGAGTGTGG+AGG + Chr1:61182079-61182098 MsG0180003363.01.T01:intron 50.0%
ACAACAGGCACCCCTTACTG+AGG + Chr1:61178786-61178805 MsG0180003363.01.T01:intron 55.0%
ACCATCTCACGGTGAAGCTC+CGG - Chr1:61187362-61187381 None:intergenic 55.0%
ATCTATGTCATCCGCCGCCA+TGG + Chr1:61187385-61187404 MsG0180003363.01.T01:CDS 55.0%
CCACGGTAGTTAACTACCGC+TGG + Chr1:61183340-61183359 MsG0180003363.01.T01:intron 55.0%
CCAGCGGTAGTTAACTACCG+TGG - Chr1:61183343-61183362 None:intergenic 55.0%
CCATGCGGAGATCACTCTCA+AGG - Chr1:61186208-61186227 None:intergenic 55.0%
CCTTGAGAGTGATCTCCGCA+TGG + Chr1:61186205-61186224 MsG0180003363.01.T01:intron 55.0%
CGGCAGTTAACTACCGTCGA+GGG + Chr1:61183419-61183438 MsG0180003363.01.T01:intron 55.0%
CGGCGGTAATTAACTACCGC+TGG + Chr1:61182658-61182677 MsG0180003363.01.T01:intron 55.0%
CGGTAGTTAATTACCGCCGG+GGG - Chr1:61182657-61182676 None:intergenic 55.0%
CTACCGCCGGATAAATCCAG+CGG + Chr1:61183399-61183418 MsG0180003363.01.T01:intron 55.0%
GAGGATGGTGTCTCAGTGCA+AGG + Chr1:61186003-61186022 MsG0180003363.01.T01:intron 55.0%
GATGTTGACCAGCGGGTCTT+CGG - Chr1:61187320-61187339 None:intergenic 55.0%
GCATGCGCCTAGACTCAGAA+AGG - Chr1:61181185-61181204 None:intergenic 55.0%
GCGGTAGTTAATTACCGCCG+GGG - Chr1:61182658-61182677 None:intergenic 55.0%
GGGATGGAGTCCTCGTAAGA+TGG - Chr1:61184610-61184629 None:intergenic 55.0%
GGTACATGTTGGTCCTCCTC+CGG + Chr1:61185464-61185483 MsG0180003363.01.T01:intron 55.0%
GTACATGTTGGTCCTCCTCC+GGG + Chr1:61185465-61185484 MsG0180003363.01.T01:intron 55.0%
TACATGTTGGTCCTCCTCCG+GGG + Chr1:61185466-61185485 MsG0180003363.01.T01:intron 55.0%
TCCGGCGATGACCATCATTG+AGG + Chr1:61187442-61187461 MsG0180003363.01.T01:CDS 55.0%
TGGCATCCGAGTGGATCACA+TGG + Chr1:61178152-61178171 MsG0180003363.01.T01:CDS 55.0%
TTACGAGGACTCCATCCCTG+AGG + Chr1:61184612-61184631 MsG0180003363.01.T01:intron 55.0%
! ATGGTGGGGTCCCACTTAAG+TGG - Chr1:61184903-61184922 None:intergenic 55.0%
! GAGCTCTGATGTTGACCAGC+GGG - Chr1:61187327-61187346 None:intergenic 55.0%
!! GGCTAAATCAAGAGGTGCCC+CGG - Chr1:61185486-61185505 None:intergenic 55.0%
!! TAAATCAAGAGGTGCCCCGG+AGG - Chr1:61185483-61185502 None:intergenic 55.0%
AAACCTCCGGGGATCCATGG+CGG - Chr1:61187402-61187421 None:intergenic 60.0%
ACCGGAGCTTCACCGTGAGA+TGG + Chr1:61187358-61187377 MsG0180003363.01.T01:CDS 60.0%
ATCTCACGGTGAAGCTCCGG+TGG - Chr1:61187359-61187378 None:intergenic 60.0%
CCACGGTAGTTAACGACCGC+TGG - Chr1:61182748-61182767 None:intergenic 60.0%
CCAGCGGTCGTTAACTACCG+TGG + Chr1:61182745-61182764 MsG0180003363.01.T01:intron 60.0%
CGACGGTAGTTAACTGCCGC+TGG - Chr1:61183418-61183437 None:intergenic 60.0%
CTGCCGCTGGATTTATCCGG+CGG - Chr1:61183405-61183424 None:intergenic 60.0%
GAGTGTGGAGGCCCATCACA+TGG + Chr1:61182091-61182110 MsG0180003363.01.T01:intron 60.0%
GCGGCAGTTAACTACCGTCG+AGG + Chr1:61183418-61183437 MsG0180003363.01.T01:intron 60.0%
GGCACCCCTTACTGAGGAGT+TGG + Chr1:61178792-61178811 MsG0180003363.01.T01:intron 60.0%
GGGCGTTTATGGCATCCGAG+TGG + Chr1:61178143-61178162 MsG0180003363.01.T01:CDS 60.0%
TGATGGTCATCGCCGGAGCA+CGG - Chr1:61187439-61187458 None:intergenic 60.0%
GGCAAACCTCCGGGGATCCA+TGG - Chr1:61187405-61187424 None:intergenic 65.0%
!! ATCAAGAGGTGCCCCGGAGG+AGG - Chr1:61185480-61185499 None:intergenic 65.0%
CATCCGCCGCCATGGATCCC+CGG + Chr1:61187393-61187412 MsG0180003363.01.T01:CDS 70.0%
! GGTCAGTGCCGAAGACCCGC+TGG + Chr1:61187309-61187328 MsG0180003363.01.T01:intron 70.0%
CCTCCGGGGATCCATGGCGG+CGG - Chr1:61187399-61187418 None:intergenic 75.0%
! CCGCCGCCATGGATCCCCGG+AGG + Chr1:61187396-61187415 MsG0180003363.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 61177428 61187490 61177428 ID=MsG0180003363.01;Name=MsG0180003363.01
Chr1 mRNA 61177428 61187490 61177428 ID=MsG0180003363.01.T01;Parent=MsG0180003363.01;Name=MsG0180003363.01.T01;_AED=0.56;_eAED=0.66;_QI=0|0|0|0.77|1|1|9|0|330
Chr1 exon 61177428 61177442 61177428 ID=MsG0180003363.01.T01:exon:4164;Parent=MsG0180003363.01.T01
Chr1 exon 61178125 61178295 61178125 ID=MsG0180003363.01.T01:exon:4165;Parent=MsG0180003363.01.T01
Chr1 exon 61178354 61178560 61178354 ID=MsG0180003363.01.T01:exon:4166;Parent=MsG0180003363.01.T01
Chr1 exon 61178793 61178904 61178793 ID=MsG0180003363.01.T01:exon:4167;Parent=MsG0180003363.01.T01
Chr1 exon 61180248 61180364 61180248 ID=MsG0180003363.01.T01:exon:4168;Parent=MsG0180003363.01.T01
Chr1 exon 61180504 61180566 61180504 ID=MsG0180003363.01.T01:exon:4169;Parent=MsG0180003363.01.T01
Chr1 exon 61181253 61181330 61181253 ID=MsG0180003363.01.T01:exon:4170;Parent=MsG0180003363.01.T01
Chr1 exon 61184460 61184513 61184460 ID=MsG0180003363.01.T01:exon:4171;Parent=MsG0180003363.01.T01
Chr1 exon 61187315 61187490 61187315 ID=MsG0180003363.01.T01:exon:4172;Parent=MsG0180003363.01.T01
Chr1 CDS 61177428 61177442 61177428 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61178125 61178295 61178125 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61178354 61178560 61178354 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61178793 61178904 61178793 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61180248 61180364 61180248 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61180504 61180566 61180504 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61181253 61181330 61181253 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61184460 61184513 61184460 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Chr1 CDS 61187315 61187490 61187315 ID=MsG0180003363.01.T01:cds;Parent=MsG0180003363.01.T01
Gene Sequence

>MsG0180003363.01.T01

ATGGAAAACCTCAGGGGACTTGCTGTACATTTTGGGCGTTTATGGCATCCGAGTGGATCACATGGTGAGTATGTGTATCACTATCACATTCACAGGGATAGAGTAGAAGTGCGTTTTATTTTGTCTTATGTGGACTGGTGGTGTCAAAATTATGCTCTTCTGTGGTATGCAGATTGGGAAAACAGGGCTGTGTTCATTCCTCTTGCTTTGACCTCTCTAATGTATGCTGGCTCTTTGTTCCTCAAGTCTCTTCTGTTGTTTGATTTTTGGAGGCAACATTCATTTTTTGGTGGCGAGATTTCCTTTGATTCCCTCAAATGTGCCGTGACGAGATTTATTAACTGGTTGTCTGAAATTTCATCAAATGTTTTGACTTGGAGAAACTATGTTGTGGCACCCCTTACTGAGGAGTTGGTGTTTAGGGCGTGCATGCTTCCTATACTTCTCTGTGGAGGGTTTAAACCATACAGTGCTATGATTCTTTGCCCCATTTTCTTCAGCTTATCTCATTTAAATCATTTCATGGAGATATACACCAAACAAAACTACAGAATAATGAAGGCTGCTATGGTTATAGGTATTCTCAATGTTTACATTAATACATTGTTCATCAAGTTCCGGGGACTCCAGCTTGGCTACACTGTTGTCTTTGGGTCATATGCTTCTTTTCTTTTCATTCGAACTGGTAATCTTGCTGCTCCATTAGTTGCTCATGTATATTGTAATTTTATGGGCCTGCCTGTATTGTATTCACAGAGAAGTGGGATGTCATTTGAATATGCATGCAAAGATCCCCTTGAGGGTTGTCCCATTCAAGTGCCGAAGACCCGCTGGTCAACATCAGAGCTCTATTGTGGACCACCGGAGCTTCACCGTGAGATGGTCAAATCTATGTCATCCGCCGCCATGGATCCCCGGAGGTTTGCCATTGGCGAGCACCGTGCTCCGGCGATGACCATCATTGAGGTTGACTGCCACCTTAACGATATTTGA
Protein sequence

>MsG0180003363.01.T01

MENLRGLAVHFGRLWHPSGSHGEYVYHYHIHRDRVEVRFILSYVDWWCQNYALLWYADWENRAVFIPLALTSLMYAGSLFLKSLLLFDFWRQHSFFGGEISFDSLKCAVTRFINWLSEISSNVLTWRNYVVAPLTEELVFRACMLPILLCGGFKPYSAMILCPIFFSLSHLNHFMEIYTKQNYRIMKAAMVIGILNVYINTLFIKFRGLQLGYTVVFGSYASFLFIRTGNLAAPLVAHVYCNFMGLPVLYSQRSGMSFEYACKDPLEGCPIQVPKTRWSTSELYCGPPELHREMVKSMSSAAMDPRRFAIGEHRAPAMTIIEVDCHLNDI*